data_3AGV # _entry.id 3AGV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3AGV pdb_00003agv 10.2210/pdb3agv/pdb NDB NA0496 ? ? RCSB RCSB029237 ? ? WWPDB D_1000029237 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-11-10 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2023-11-01 5 'Structure model' 2 2 2024-11-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Structure summary' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Refinement description' 9 4 'Structure model' 'Structure summary' 10 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' chem_comp 3 3 'Structure model' entity 4 3 'Structure model' pdbx_branch_scheme 5 3 'Structure model' pdbx_chem_comp_identifier 6 3 'Structure model' pdbx_entity_branch 7 3 'Structure model' pdbx_entity_branch_descriptor 8 3 'Structure model' pdbx_entity_branch_link 9 3 'Structure model' pdbx_entity_branch_list 10 3 'Structure model' pdbx_entity_nonpoly 11 3 'Structure model' pdbx_nonpoly_scheme 12 3 'Structure model' pdbx_struct_assembly_gen 13 3 'Structure model' pdbx_struct_conn_angle 14 3 'Structure model' struct_asym 15 3 'Structure model' struct_conn 16 3 'Structure model' struct_site 17 3 'Structure model' struct_site_gen 18 4 'Structure model' chem_comp 19 4 'Structure model' chem_comp_atom 20 4 'Structure model' chem_comp_bond 21 4 'Structure model' database_2 22 4 'Structure model' pdbx_initial_refinement_model 23 5 'Structure model' pdbx_entry_details 24 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.B_iso_or_equiv' 2 3 'Structure model' '_atom_site.Cartn_x' 3 3 'Structure model' '_atom_site.Cartn_y' 4 3 'Structure model' '_atom_site.Cartn_z' 5 3 'Structure model' '_atom_site.auth_asym_id' 6 3 'Structure model' '_atom_site.auth_atom_id' 7 3 'Structure model' '_atom_site.auth_comp_id' 8 3 'Structure model' '_atom_site.auth_seq_id' 9 3 'Structure model' '_atom_site.label_asym_id' 10 3 'Structure model' '_atom_site.label_atom_id' 11 3 'Structure model' '_atom_site.label_comp_id' 12 3 'Structure model' '_atom_site.label_entity_id' 13 3 'Structure model' '_atom_site.type_symbol' 14 3 'Structure model' '_chem_comp.name' 15 3 'Structure model' '_chem_comp.type' 16 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 20 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 21 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 22 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 23 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 24 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 25 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 26 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 27 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 28 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 29 3 'Structure model' '_pdbx_struct_conn_angle.value' 30 3 'Structure model' '_struct_conn.pdbx_dist_value' 31 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 32 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 33 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 34 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 35 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 36 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 37 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 38 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 39 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 40 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 41 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 42 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 43 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 44 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 45 4 'Structure model' '_chem_comp.pdbx_synonyms' 46 4 'Structure model' '_database_2.pdbx_DOI' 47 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3AGV _pdbx_database_status.recvd_initial_deposition_date 2010-04-08 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nomura, Y.' 1 'Sugiyama, S.' 2 'Sakamoto, T.' 3 'Miyakawa, S.' 4 'Adachi, H.' 5 'Takano, K.' 6 'Murakami, S.' 7 'Inoue, T.' 8 'Mori, Y.' 9 'Nakamura, Y.' 10 'Matsumura, H.' 11 # _citation.id primary _citation.title 'Conformational plasticity of RNA for target recognition as revealed by the 2.15 A crystal structure of a human IgG-aptamer complex' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 38 _citation.page_first 7822 _citation.page_last 7829 _citation.year 2010 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20675355 _citation.pdbx_database_id_DOI 10.1093/nar/gkq615 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nomura, Y.' 1 ? primary 'Sugiyama, S.' 2 ? primary 'Sakamoto, T.' 3 ? primary 'Miyakawa, S.' 4 ? primary 'Adachi, H.' 5 ? primary 'Takano, K.' 6 ? primary 'Murakami, S.' 7 ? primary 'Inoue, T.' 8 ? primary 'Mori, Y.' 9 ? primary 'Nakamura, Y.' 10 ? primary 'Matsumura, H.' 11 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ig gamma-1 chain C region' 23918.023 2 ? ? 'Fc fragment, residues 120-330' ? 2 polymer syn "5'-R(*GP*GP*AP*GP*GP*(UFT)P*GP*(CFZ)P*(UFT)P*(CFZ)P*(CFZ)P*GP*AP*AP*A*GP*GP*AP*AP*(CFZ)P*(UFT)P*(CFZ)P*(CFZ)P*A)-3'" 7788.638 2 ? ? ? ? 3 branched man 'alpha-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose' 707.630 1 ? ? ? ? 4 branched man ;beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-alpha-D-glucopyranose ; 1422.297 1 ? ? ? ? 5 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 6 water nat water 18.015 253 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name IgG # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG KEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK ; ;GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG KEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK ; A,B ? 2 polyribonucleotide no yes 'GGAGG(UFT)G(CFZ)(UFT)(CFZ)(CFZ)GAAAGGAA(CFZ)(UFT)(CFZ)(CFZ)A' GGAGGUGXUXXGAAAGGAAXUXXA S,U ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'CALCIUM ION' CA 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 SER n 1 4 VAL n 1 5 PHE n 1 6 LEU n 1 7 PHE n 1 8 PRO n 1 9 PRO n 1 10 LYS n 1 11 PRO n 1 12 LYS n 1 13 ASP n 1 14 THR n 1 15 LEU n 1 16 MET n 1 17 ILE n 1 18 SER n 1 19 ARG n 1 20 THR n 1 21 PRO n 1 22 GLU n 1 23 VAL n 1 24 THR n 1 25 CYS n 1 26 VAL n 1 27 VAL n 1 28 VAL n 1 29 ASP n 1 30 VAL n 1 31 SER n 1 32 HIS n 1 33 GLU n 1 34 ASP n 1 35 PRO n 1 36 GLU n 1 37 VAL n 1 38 LYS n 1 39 PHE n 1 40 ASN n 1 41 TRP n 1 42 TYR n 1 43 VAL n 1 44 ASP n 1 45 GLY n 1 46 VAL n 1 47 GLU n 1 48 VAL n 1 49 HIS n 1 50 ASN n 1 51 ALA n 1 52 LYS n 1 53 THR n 1 54 LYS n 1 55 PRO n 1 56 ARG n 1 57 GLU n 1 58 GLU n 1 59 GLN n 1 60 TYR n 1 61 ASN n 1 62 SER n 1 63 THR n 1 64 TYR n 1 65 ARG n 1 66 VAL n 1 67 VAL n 1 68 SER n 1 69 VAL n 1 70 LEU n 1 71 THR n 1 72 VAL n 1 73 LEU n 1 74 HIS n 1 75 GLN n 1 76 ASP n 1 77 TRP n 1 78 LEU n 1 79 ASN n 1 80 GLY n 1 81 LYS n 1 82 GLU n 1 83 TYR n 1 84 LYS n 1 85 CYS n 1 86 LYS n 1 87 VAL n 1 88 SER n 1 89 ASN n 1 90 LYS n 1 91 ALA n 1 92 LEU n 1 93 PRO n 1 94 ALA n 1 95 PRO n 1 96 ILE n 1 97 GLU n 1 98 LYS n 1 99 THR n 1 100 ILE n 1 101 SER n 1 102 LYS n 1 103 ALA n 1 104 LYS n 1 105 GLY n 1 106 GLN n 1 107 PRO n 1 108 ARG n 1 109 GLU n 1 110 PRO n 1 111 GLN n 1 112 VAL n 1 113 TYR n 1 114 THR n 1 115 LEU n 1 116 PRO n 1 117 PRO n 1 118 SER n 1 119 ARG n 1 120 ASP n 1 121 GLU n 1 122 LEU n 1 123 THR n 1 124 LYS n 1 125 ASN n 1 126 GLN n 1 127 VAL n 1 128 SER n 1 129 LEU n 1 130 THR n 1 131 CYS n 1 132 LEU n 1 133 VAL n 1 134 LYS n 1 135 GLY n 1 136 PHE n 1 137 TYR n 1 138 PRO n 1 139 SER n 1 140 ASP n 1 141 ILE n 1 142 ALA n 1 143 VAL n 1 144 GLU n 1 145 TRP n 1 146 GLU n 1 147 SER n 1 148 ASN n 1 149 GLY n 1 150 GLN n 1 151 PRO n 1 152 GLU n 1 153 ASN n 1 154 ASN n 1 155 TYR n 1 156 LYS n 1 157 THR n 1 158 THR n 1 159 PRO n 1 160 PRO n 1 161 VAL n 1 162 LEU n 1 163 ASP n 1 164 SER n 1 165 ASP n 1 166 GLY n 1 167 SER n 1 168 PHE n 1 169 PHE n 1 170 LEU n 1 171 TYR n 1 172 SER n 1 173 LYS n 1 174 LEU n 1 175 THR n 1 176 VAL n 1 177 ASP n 1 178 LYS n 1 179 SER n 1 180 ARG n 1 181 TRP n 1 182 GLN n 1 183 GLN n 1 184 GLY n 1 185 ASN n 1 186 VAL n 1 187 PHE n 1 188 SER n 1 189 CYS n 1 190 SER n 1 191 VAL n 1 192 MET n 1 193 HIS n 1 194 GLU n 1 195 ALA n 1 196 LEU n 1 197 HIS n 1 198 ASN n 1 199 HIS n 1 200 TYR n 1 201 THR n 1 202 GLN n 1 203 LYS n 1 204 SER n 1 205 LEU n 1 206 SER n 1 207 LEU n 1 208 SER n 1 209 PRO n 1 210 GLY n 1 211 LYS n 2 1 G n 2 2 G n 2 3 A n 2 4 G n 2 5 G n 2 6 UFT n 2 7 G n 2 8 CFZ n 2 9 UFT n 2 10 CFZ n 2 11 CFZ n 2 12 G n 2 13 A n 2 14 A n 2 15 A n 2 16 G n 2 17 G n 2 18 A n 2 19 A n 2 20 CFZ n 2 21 UFT n 2 22 CFZ n 2 23 CFZ n 2 24 A n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 3 oligosaccharide 4 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 DGalpa1-4DGlcpNAca1-2DManpa1-6DManpa1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 3 'WURCS=2.0/3,4,3/[a1122h-1a_1-5][a2122h-1a_1-5_2*NCC/3=O][a2112h-1a_1-5]/1-1-2-3/a6-b1_b2-c1_c4-d1' WURCS PDB2Glycan 1.1.0 3 3 '[][a-D-Manp]{[(6+1)][a-D-Manp]{[(2+1)][a-D-GlcpNAc]{[(4+1)][a-D-Galp]{}}}}' LINUCS PDB-CARE ? 4 4 'DGalpb1-4DGlcpNAcb1-2DManpa1-6[DManpa1-3]DManpb1-4DGlcpNAcb1-4[LFucpb1-6]DGlcpNAca1-ROH' 'Glycam Condensed Sequence' GMML 1.0 5 4 ;WURCS=2.0/6,8,7/[a2122h-1a_1-5_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][a1221m-1b_1-5]/1-2-3-4-4-2-5-6/a4-b1_a6-h1_b4-c1_c3-d1_c6-e1_e2-f1_f4-g1 ; WURCS PDB2Glycan 1.1.0 6 4 ;[][a-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}[(6+1)][a-D-Manp]{[(2+1)][b-D-GlcpNAc]{[(4+1)][b-D-Galp]{}}}}}[(6+1)][b-L-Fucp]{}} ; LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 3 2 MAN C1 O1 1 MAN O6 HO6 sing ? 2 3 3 NDG C1 O1 2 MAN O2 HO2 sing ? 3 3 4 GLA C1 O1 3 NDG O4 HO4 sing ? 4 4 2 NAG C1 O1 1 NDG O4 HO4 sing ? 5 4 3 BMA C1 O1 2 NAG O4 HO4 sing ? 6 4 4 MAN C1 O1 3 BMA O6 HO6 sing ? 7 4 5 NAG C1 O1 4 MAN O2 HO2 sing ? 8 4 6 GAL C1 O1 5 NAG O4 HO4 sing ? 9 4 7 MAN C1 O1 3 BMA O3 HO3 sing ? 10 4 8 FUL C1 O1 1 NDG O6 HO6 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CFZ 'DNA linking' n ;2'-deoxy-2'-fluorocytidine 5'-(dihydrogen phosphate) ; ? 'C9 H13 F N3 O7 P' 325.188 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUL 'L-saccharide, beta linking' . beta-L-fucopyranose 'beta-L-fucose; 6-deoxy-beta-L-galactopyranose; L-fucose; fucose; 6-DEOXY-BETA-L-GALACTOSE' 'C6 H12 O5' 164.156 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156 GLA 'D-saccharide, alpha linking' . alpha-D-galactopyranose 'alpha-D-galactose; D-galactose; galactose; ALPHA D-GALACTOSE' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 NDG 'D-saccharide, alpha linking' . 2-acetamido-2-deoxy-alpha-D-glucopyranose ;N-acetyl-alpha-D-glucosamine; 2-acetamido-2-deoxy-alpha-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UFT 'DNA linking' n ;2'-deoxy-2'-fluorouridine 5'-(dihydrogen phosphate) ; ? 'C9 H12 F N2 O8 P' 326.172 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man FUL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpb FUL 'COMMON NAME' GMML 1.0 b-L-fucopyranose FUL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-L-Fucp FUL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal GLA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpa GLA 'COMMON NAME' GMML 1.0 a-D-galactopyranose GLA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Galp GLA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc NDG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAca NDG 'COMMON NAME' GMML 1.0 N-acetyl-a-D-glucopyranosamine NDG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GlcpNAc NDG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 237 ? ? ? A . n A 1 2 PRO 2 238 ? ? ? A . n A 1 3 SER 3 239 ? ? ? A . n A 1 4 VAL 4 240 ? ? ? A . n A 1 5 PHE 5 241 241 PHE PHE A . n A 1 6 LEU 6 242 242 LEU LEU A . n A 1 7 PHE 7 243 243 PHE PHE A . n A 1 8 PRO 8 244 244 PRO PRO A . n A 1 9 PRO 9 245 245 PRO PRO A . n A 1 10 LYS 10 246 246 LYS LYS A . n A 1 11 PRO 11 247 247 PRO PRO A . n A 1 12 LYS 12 248 248 LYS LYS A . n A 1 13 ASP 13 249 249 ASP ASP A . n A 1 14 THR 14 250 250 THR THR A . n A 1 15 LEU 15 251 251 LEU LEU A . n A 1 16 MET 16 252 252 MET MET A . n A 1 17 ILE 17 253 253 ILE ILE A . n A 1 18 SER 18 254 254 SER SER A . n A 1 19 ARG 19 255 255 ARG ARG A . n A 1 20 THR 20 256 256 THR THR A . n A 1 21 PRO 21 257 257 PRO PRO A . n A 1 22 GLU 22 258 258 GLU GLU A . n A 1 23 VAL 23 259 259 VAL VAL A . n A 1 24 THR 24 260 260 THR THR A . n A 1 25 CYS 25 261 261 CYS CYS A . n A 1 26 VAL 26 262 262 VAL VAL A . n A 1 27 VAL 27 263 ? ? ? A . n A 1 28 VAL 28 264 ? ? ? A . n A 1 29 ASP 29 265 ? ? ? A . n A 1 30 VAL 30 266 ? ? ? A . n A 1 31 SER 31 267 ? ? ? A . n A 1 32 HIS 32 268 ? ? ? A . n A 1 33 GLU 33 269 ? ? ? A . n A 1 34 ASP 34 270 ? ? ? A . n A 1 35 PRO 35 271 ? ? ? A . n A 1 36 GLU 36 272 272 GLU GLU A . n A 1 37 VAL 37 273 273 VAL VAL A . n A 1 38 LYS 38 274 274 LYS LYS A . n A 1 39 PHE 39 275 275 PHE PHE A . n A 1 40 ASN 40 276 276 ASN ASN A . n A 1 41 TRP 41 277 277 TRP TRP A . n A 1 42 TYR 42 278 278 TYR TYR A . n A 1 43 VAL 43 279 279 VAL VAL A . n A 1 44 ASP 44 280 280 ASP ASP A . n A 1 45 GLY 45 281 281 GLY GLY A . n A 1 46 VAL 46 282 282 VAL VAL A . n A 1 47 GLU 47 283 283 GLU GLU A . n A 1 48 VAL 48 284 284 VAL VAL A . n A 1 49 HIS 49 285 285 HIS HIS A . n A 1 50 ASN 50 286 286 ASN ASN A . n A 1 51 ALA 51 287 287 ALA ALA A . n A 1 52 LYS 52 288 288 LYS LYS A . n A 1 53 THR 53 289 289 THR THR A . n A 1 54 LYS 54 290 290 LYS LYS A . n A 1 55 PRO 55 291 291 PRO PRO A . n A 1 56 ARG 56 292 292 ARG ARG A . n A 1 57 GLU 57 293 293 GLU GLU A . n A 1 58 GLU 58 294 294 GLU GLU A . n A 1 59 GLN 59 295 295 GLN GLN A . n A 1 60 TYR 60 296 296 TYR TYR A . n A 1 61 ASN 61 297 ? ? ? A . n A 1 62 SER 62 298 ? ? ? A . n A 1 63 THR 63 299 ? ? ? A . n A 1 64 TYR 64 300 ? ? ? A . n A 1 65 ARG 65 301 ? ? ? A . n A 1 66 VAL 66 302 302 VAL VAL A . n A 1 67 VAL 67 303 303 VAL VAL A . n A 1 68 SER 68 304 304 SER SER A . n A 1 69 VAL 69 305 305 VAL VAL A . n A 1 70 LEU 70 306 306 LEU LEU A . n A 1 71 THR 71 307 307 THR THR A . n A 1 72 VAL 72 308 308 VAL VAL A . n A 1 73 LEU 73 309 309 LEU LEU A . n A 1 74 HIS 74 310 310 HIS HIS A . n A 1 75 GLN 75 311 311 GLN GLN A . n A 1 76 ASP 76 312 312 ASP ASP A . n A 1 77 TRP 77 313 313 TRP TRP A . n A 1 78 LEU 78 314 314 LEU LEU A . n A 1 79 ASN 79 315 315 ASN ASN A . n A 1 80 GLY 80 316 316 GLY GLY A . n A 1 81 LYS 81 317 317 LYS LYS A . n A 1 82 GLU 82 318 318 GLU GLU A . n A 1 83 TYR 83 319 319 TYR TYR A . n A 1 84 LYS 84 320 320 LYS LYS A . n A 1 85 CYS 85 321 321 CYS CYS A . n A 1 86 LYS 86 322 ? ? ? A . n A 1 87 VAL 87 323 ? ? ? A . n A 1 88 SER 88 324 ? ? ? A . n A 1 89 ASN 89 325 ? ? ? A . n A 1 90 LYS 90 326 ? ? ? A . n A 1 91 ALA 91 327 ? ? ? A . n A 1 92 LEU 92 328 ? ? ? A . n A 1 93 PRO 93 329 ? ? ? A . n A 1 94 ALA 94 330 ? ? ? A . n A 1 95 PRO 95 331 ? ? ? A . n A 1 96 ILE 96 332 ? ? ? A . n A 1 97 GLU 97 333 ? ? ? A . n A 1 98 LYS 98 334 334 LYS LYS A . n A 1 99 THR 99 335 335 THR THR A . n A 1 100 ILE 100 336 336 ILE ILE A . n A 1 101 SER 101 337 337 SER SER A . n A 1 102 LYS 102 338 338 LYS LYS A . n A 1 103 ALA 103 339 339 ALA ALA A . n A 1 104 LYS 104 340 340 LYS LYS A . n A 1 105 GLY 105 341 341 GLY GLY A . n A 1 106 GLN 106 342 342 GLN GLN A . n A 1 107 PRO 107 343 343 PRO PRO A . n A 1 108 ARG 108 344 344 ARG ARG A . n A 1 109 GLU 109 345 345 GLU GLU A . n A 1 110 PRO 110 346 346 PRO PRO A . n A 1 111 GLN 111 347 347 GLN GLN A . n A 1 112 VAL 112 348 348 VAL VAL A . n A 1 113 TYR 113 349 349 TYR TYR A . n A 1 114 THR 114 350 350 THR THR A . n A 1 115 LEU 115 351 351 LEU LEU A . n A 1 116 PRO 116 352 352 PRO PRO A . n A 1 117 PRO 117 353 353 PRO PRO A . n A 1 118 SER 118 354 354 SER SER A . n A 1 119 ARG 119 355 355 ARG ARG A . n A 1 120 ASP 120 356 356 ASP ASP A . n A 1 121 GLU 121 357 357 GLU GLU A . n A 1 122 LEU 122 358 358 LEU LEU A . n A 1 123 THR 123 359 359 THR THR A . n A 1 124 LYS 124 360 360 LYS LYS A . n A 1 125 ASN 125 361 361 ASN ASN A . n A 1 126 GLN 126 362 362 GLN GLN A . n A 1 127 VAL 127 363 363 VAL VAL A . n A 1 128 SER 128 364 364 SER SER A . n A 1 129 LEU 129 365 365 LEU LEU A . n A 1 130 THR 130 366 366 THR THR A . n A 1 131 CYS 131 367 367 CYS CYS A . n A 1 132 LEU 132 368 368 LEU LEU A . n A 1 133 VAL 133 369 369 VAL VAL A . n A 1 134 LYS 134 370 370 LYS LYS A . n A 1 135 GLY 135 371 371 GLY GLY A . n A 1 136 PHE 136 372 372 PHE PHE A . n A 1 137 TYR 137 373 373 TYR TYR A . n A 1 138 PRO 138 374 374 PRO PRO A . n A 1 139 SER 139 375 375 SER SER A . n A 1 140 ASP 140 376 376 ASP ASP A . n A 1 141 ILE 141 377 377 ILE ILE A . n A 1 142 ALA 142 378 378 ALA ALA A . n A 1 143 VAL 143 379 379 VAL VAL A . n A 1 144 GLU 144 380 380 GLU GLU A . n A 1 145 TRP 145 381 381 TRP TRP A . n A 1 146 GLU 146 382 382 GLU GLU A . n A 1 147 SER 147 383 383 SER SER A . n A 1 148 ASN 148 384 384 ASN ASN A . n A 1 149 GLY 149 385 385 GLY GLY A . n A 1 150 GLN 150 386 386 GLN GLN A . n A 1 151 PRO 151 387 387 PRO PRO A . n A 1 152 GLU 152 388 388 GLU GLU A . n A 1 153 ASN 153 389 389 ASN ASN A . n A 1 154 ASN 154 390 390 ASN ASN A . n A 1 155 TYR 155 391 391 TYR TYR A . n A 1 156 LYS 156 392 392 LYS LYS A . n A 1 157 THR 157 393 393 THR THR A . n A 1 158 THR 158 394 394 THR THR A . n A 1 159 PRO 159 395 395 PRO PRO A . n A 1 160 PRO 160 396 396 PRO PRO A . n A 1 161 VAL 161 397 397 VAL VAL A . n A 1 162 LEU 162 398 398 LEU LEU A . n A 1 163 ASP 163 399 399 ASP ASP A . n A 1 164 SER 164 400 400 SER SER A . n A 1 165 ASP 165 401 401 ASP ASP A . n A 1 166 GLY 166 402 402 GLY GLY A . n A 1 167 SER 167 403 403 SER SER A . n A 1 168 PHE 168 404 404 PHE PHE A . n A 1 169 PHE 169 405 405 PHE PHE A . n A 1 170 LEU 170 406 406 LEU LEU A . n A 1 171 TYR 171 407 407 TYR TYR A . n A 1 172 SER 172 408 408 SER SER A . n A 1 173 LYS 173 409 409 LYS LYS A . n A 1 174 LEU 174 410 410 LEU LEU A . n A 1 175 THR 175 411 411 THR THR A . n A 1 176 VAL 176 412 412 VAL VAL A . n A 1 177 ASP 177 413 413 ASP ASP A . n A 1 178 LYS 178 414 414 LYS LYS A . n A 1 179 SER 179 415 415 SER SER A . n A 1 180 ARG 180 416 416 ARG ARG A . n A 1 181 TRP 181 417 417 TRP TRP A . n A 1 182 GLN 182 418 418 GLN GLN A . n A 1 183 GLN 183 419 419 GLN GLN A . n A 1 184 GLY 184 420 420 GLY GLY A . n A 1 185 ASN 185 421 421 ASN ASN A . n A 1 186 VAL 186 422 422 VAL VAL A . n A 1 187 PHE 187 423 423 PHE PHE A . n A 1 188 SER 188 424 424 SER SER A . n A 1 189 CYS 189 425 425 CYS CYS A . n A 1 190 SER 190 426 426 SER SER A . n A 1 191 VAL 191 427 427 VAL VAL A . n A 1 192 MET 192 428 428 MET MET A . n A 1 193 HIS 193 429 429 HIS HIS A . n A 1 194 GLU 194 430 430 GLU GLU A . n A 1 195 ALA 195 431 431 ALA ALA A . n A 1 196 LEU 196 432 432 LEU LEU A . n A 1 197 HIS 197 433 433 HIS HIS A . n A 1 198 ASN 198 434 434 ASN ASN A . n A 1 199 HIS 199 435 435 HIS HIS A . n A 1 200 TYR 200 436 436 TYR TYR A . n A 1 201 THR 201 437 437 THR THR A . n A 1 202 GLN 202 438 438 GLN GLN A . n A 1 203 LYS 203 439 439 LYS LYS A . n A 1 204 SER 204 440 440 SER SER A . n A 1 205 LEU 205 441 441 LEU LEU A . n A 1 206 SER 206 442 442 SER SER A . n A 1 207 LEU 207 443 443 LEU LEU A . n A 1 208 SER 208 444 ? ? ? A . n A 1 209 PRO 209 445 ? ? ? A . n A 1 210 GLY 210 446 ? ? ? A . n A 1 211 LYS 211 447 ? ? ? A . n B 1 1 GLY 1 237 237 GLY GLY B . n B 1 2 PRO 2 238 238 PRO PRO B . n B 1 3 SER 3 239 239 SER SER B . n B 1 4 VAL 4 240 240 VAL VAL B . n B 1 5 PHE 5 241 241 PHE PHE B . n B 1 6 LEU 6 242 242 LEU LEU B . n B 1 7 PHE 7 243 243 PHE PHE B . n B 1 8 PRO 8 244 244 PRO PRO B . n B 1 9 PRO 9 245 245 PRO PRO B . n B 1 10 LYS 10 246 246 LYS LYS B . n B 1 11 PRO 11 247 247 PRO PRO B . n B 1 12 LYS 12 248 248 LYS LYS B . n B 1 13 ASP 13 249 249 ASP ASP B . n B 1 14 THR 14 250 250 THR THR B . n B 1 15 LEU 15 251 251 LEU LEU B . n B 1 16 MET 16 252 252 MET MET B . n B 1 17 ILE 17 253 253 ILE ILE B . n B 1 18 SER 18 254 254 SER SER B . n B 1 19 ARG 19 255 255 ARG ARG B . n B 1 20 THR 20 256 256 THR THR B . n B 1 21 PRO 21 257 257 PRO PRO B . n B 1 22 GLU 22 258 258 GLU GLU B . n B 1 23 VAL 23 259 259 VAL VAL B . n B 1 24 THR 24 260 260 THR THR B . n B 1 25 CYS 25 261 261 CYS CYS B . n B 1 26 VAL 26 262 262 VAL VAL B . n B 1 27 VAL 27 263 263 VAL VAL B . n B 1 28 VAL 28 264 264 VAL VAL B . n B 1 29 ASP 29 265 265 ASP ASP B . n B 1 30 VAL 30 266 266 VAL VAL B . n B 1 31 SER 31 267 267 SER SER B . n B 1 32 HIS 32 268 268 HIS HIS B . n B 1 33 GLU 33 269 269 GLU GLU B . n B 1 34 ASP 34 270 270 ASP ASP B . n B 1 35 PRO 35 271 271 PRO PRO B . n B 1 36 GLU 36 272 272 GLU GLU B . n B 1 37 VAL 37 273 273 VAL VAL B . n B 1 38 LYS 38 274 274 LYS LYS B . n B 1 39 PHE 39 275 275 PHE PHE B . n B 1 40 ASN 40 276 276 ASN ASN B . n B 1 41 TRP 41 277 277 TRP TRP B . n B 1 42 TYR 42 278 278 TYR TYR B . n B 1 43 VAL 43 279 279 VAL VAL B . n B 1 44 ASP 44 280 280 ASP ASP B . n B 1 45 GLY 45 281 281 GLY GLY B . n B 1 46 VAL 46 282 282 VAL VAL B . n B 1 47 GLU 47 283 283 GLU GLU B . n B 1 48 VAL 48 284 284 VAL VAL B . n B 1 49 HIS 49 285 285 HIS HIS B . n B 1 50 ASN 50 286 286 ASN ASN B . n B 1 51 ALA 51 287 287 ALA ALA B . n B 1 52 LYS 52 288 288 LYS LYS B . n B 1 53 THR 53 289 289 THR THR B . n B 1 54 LYS 54 290 290 LYS LYS B . n B 1 55 PRO 55 291 291 PRO PRO B . n B 1 56 ARG 56 292 292 ARG ARG B . n B 1 57 GLU 57 293 293 GLU GLU B . n B 1 58 GLU 58 294 294 GLU GLU B . n B 1 59 GLN 59 295 295 GLN GLN B . n B 1 60 TYR 60 296 296 TYR TYR B . n B 1 61 ASN 61 297 297 ASN ASN B . n B 1 62 SER 62 298 298 SER SER B . n B 1 63 THR 63 299 299 THR THR B . n B 1 64 TYR 64 300 300 TYR TYR B . n B 1 65 ARG 65 301 301 ARG ARG B . n B 1 66 VAL 66 302 302 VAL VAL B . n B 1 67 VAL 67 303 303 VAL VAL B . n B 1 68 SER 68 304 304 SER SER B . n B 1 69 VAL 69 305 305 VAL VAL B . n B 1 70 LEU 70 306 306 LEU LEU B . n B 1 71 THR 71 307 307 THR THR B . n B 1 72 VAL 72 308 308 VAL VAL B . n B 1 73 LEU 73 309 309 LEU LEU B . n B 1 74 HIS 74 310 310 HIS HIS B . n B 1 75 GLN 75 311 311 GLN GLN B . n B 1 76 ASP 76 312 312 ASP ASP B . n B 1 77 TRP 77 313 313 TRP TRP B . n B 1 78 LEU 78 314 314 LEU LEU B . n B 1 79 ASN 79 315 315 ASN ASN B . n B 1 80 GLY 80 316 316 GLY GLY B . n B 1 81 LYS 81 317 317 LYS LYS B . n B 1 82 GLU 82 318 318 GLU GLU B . n B 1 83 TYR 83 319 319 TYR TYR B . n B 1 84 LYS 84 320 320 LYS LYS B . n B 1 85 CYS 85 321 321 CYS CYS B . n B 1 86 LYS 86 322 322 LYS LYS B . n B 1 87 VAL 87 323 323 VAL VAL B . n B 1 88 SER 88 324 324 SER SER B . n B 1 89 ASN 89 325 325 ASN ASN B . n B 1 90 LYS 90 326 326 LYS LYS B . n B 1 91 ALA 91 327 327 ALA ALA B . n B 1 92 LEU 92 328 328 LEU LEU B . n B 1 93 PRO 93 329 329 PRO PRO B . n B 1 94 ALA 94 330 330 ALA ALA B . n B 1 95 PRO 95 331 331 PRO PRO B . n B 1 96 ILE 96 332 332 ILE ILE B . n B 1 97 GLU 97 333 333 GLU GLU B . n B 1 98 LYS 98 334 334 LYS LYS B . n B 1 99 THR 99 335 335 THR THR B . n B 1 100 ILE 100 336 336 ILE ILE B . n B 1 101 SER 101 337 337 SER SER B . n B 1 102 LYS 102 338 338 LYS LYS B . n B 1 103 ALA 103 339 339 ALA ALA B . n B 1 104 LYS 104 340 340 LYS LYS B . n B 1 105 GLY 105 341 341 GLY GLY B . n B 1 106 GLN 106 342 342 GLN GLN B . n B 1 107 PRO 107 343 343 PRO PRO B . n B 1 108 ARG 108 344 344 ARG ARG B . n B 1 109 GLU 109 345 345 GLU GLU B . n B 1 110 PRO 110 346 346 PRO PRO B . n B 1 111 GLN 111 347 347 GLN GLN B . n B 1 112 VAL 112 348 348 VAL VAL B . n B 1 113 TYR 113 349 349 TYR TYR B . n B 1 114 THR 114 350 350 THR THR B . n B 1 115 LEU 115 351 351 LEU LEU B . n B 1 116 PRO 116 352 352 PRO PRO B . n B 1 117 PRO 117 353 353 PRO PRO B . n B 1 118 SER 118 354 354 SER SER B . n B 1 119 ARG 119 355 355 ARG ARG B . n B 1 120 ASP 120 356 356 ASP ASP B . n B 1 121 GLU 121 357 357 GLU GLU B . n B 1 122 LEU 122 358 358 LEU LEU B . n B 1 123 THR 123 359 359 THR THR B . n B 1 124 LYS 124 360 360 LYS LYS B . n B 1 125 ASN 125 361 361 ASN ASN B . n B 1 126 GLN 126 362 362 GLN GLN B . n B 1 127 VAL 127 363 363 VAL VAL B . n B 1 128 SER 128 364 364 SER SER B . n B 1 129 LEU 129 365 365 LEU LEU B . n B 1 130 THR 130 366 366 THR THR B . n B 1 131 CYS 131 367 367 CYS CYS B . n B 1 132 LEU 132 368 368 LEU LEU B . n B 1 133 VAL 133 369 369 VAL VAL B . n B 1 134 LYS 134 370 370 LYS LYS B . n B 1 135 GLY 135 371 371 GLY GLY B . n B 1 136 PHE 136 372 372 PHE PHE B . n B 1 137 TYR 137 373 373 TYR TYR B . n B 1 138 PRO 138 374 374 PRO PRO B . n B 1 139 SER 139 375 375 SER SER B . n B 1 140 ASP 140 376 376 ASP ASP B . n B 1 141 ILE 141 377 377 ILE ILE B . n B 1 142 ALA 142 378 378 ALA ALA B . n B 1 143 VAL 143 379 379 VAL VAL B . n B 1 144 GLU 144 380 380 GLU GLU B . n B 1 145 TRP 145 381 381 TRP TRP B . n B 1 146 GLU 146 382 382 GLU GLU B . n B 1 147 SER 147 383 383 SER SER B . n B 1 148 ASN 148 384 384 ASN ASN B . n B 1 149 GLY 149 385 385 GLY GLY B . n B 1 150 GLN 150 386 386 GLN GLN B . n B 1 151 PRO 151 387 387 PRO PRO B . n B 1 152 GLU 152 388 388 GLU GLU B . n B 1 153 ASN 153 389 389 ASN ASN B . n B 1 154 ASN 154 390 390 ASN ASN B . n B 1 155 TYR 155 391 391 TYR TYR B . n B 1 156 LYS 156 392 392 LYS LYS B . n B 1 157 THR 157 393 393 THR THR B . n B 1 158 THR 158 394 394 THR THR B . n B 1 159 PRO 159 395 395 PRO PRO B . n B 1 160 PRO 160 396 396 PRO PRO B . n B 1 161 VAL 161 397 397 VAL VAL B . n B 1 162 LEU 162 398 398 LEU LEU B . n B 1 163 ASP 163 399 399 ASP ASP B . n B 1 164 SER 164 400 400 SER SER B . n B 1 165 ASP 165 401 401 ASP ASP B . n B 1 166 GLY 166 402 402 GLY GLY B . n B 1 167 SER 167 403 403 SER SER B . n B 1 168 PHE 168 404 404 PHE PHE B . n B 1 169 PHE 169 405 405 PHE PHE B . n B 1 170 LEU 170 406 406 LEU LEU B . n B 1 171 TYR 171 407 407 TYR TYR B . n B 1 172 SER 172 408 408 SER SER B . n B 1 173 LYS 173 409 409 LYS LYS B . n B 1 174 LEU 174 410 410 LEU LEU B . n B 1 175 THR 175 411 411 THR THR B . n B 1 176 VAL 176 412 412 VAL VAL B . n B 1 177 ASP 177 413 413 ASP ASP B . n B 1 178 LYS 178 414 414 LYS LYS B . n B 1 179 SER 179 415 415 SER SER B . n B 1 180 ARG 180 416 416 ARG ARG B . n B 1 181 TRP 181 417 417 TRP TRP B . n B 1 182 GLN 182 418 418 GLN GLN B . n B 1 183 GLN 183 419 419 GLN GLN B . n B 1 184 GLY 184 420 420 GLY GLY B . n B 1 185 ASN 185 421 421 ASN ASN B . n B 1 186 VAL 186 422 422 VAL VAL B . n B 1 187 PHE 187 423 423 PHE PHE B . n B 1 188 SER 188 424 424 SER SER B . n B 1 189 CYS 189 425 425 CYS CYS B . n B 1 190 SER 190 426 426 SER SER B . n B 1 191 VAL 191 427 427 VAL VAL B . n B 1 192 MET 192 428 428 MET MET B . n B 1 193 HIS 193 429 429 HIS HIS B . n B 1 194 GLU 194 430 430 GLU GLU B . n B 1 195 ALA 195 431 431 ALA ALA B . n B 1 196 LEU 196 432 432 LEU LEU B . n B 1 197 HIS 197 433 433 HIS HIS B . n B 1 198 ASN 198 434 434 ASN ASN B . n B 1 199 HIS 199 435 435 HIS HIS B . n B 1 200 TYR 200 436 436 TYR TYR B . n B 1 201 THR 201 437 437 THR THR B . n B 1 202 GLN 202 438 438 GLN GLN B . n B 1 203 LYS 203 439 439 LYS LYS B . n B 1 204 SER 204 440 440 SER SER B . n B 1 205 LEU 205 441 441 LEU LEU B . n B 1 206 SER 206 442 442 SER SER B . n B 1 207 LEU 207 443 443 LEU LEU B . n B 1 208 SER 208 444 444 SER SER B . n B 1 209 PRO 209 445 ? ? ? B . n B 1 210 GLY 210 446 ? ? ? B . n B 1 211 LYS 211 447 ? ? ? B . n C 2 1 G 1 1 1 G G S . n C 2 2 G 2 2 2 G G S . n C 2 3 A 3 3 3 A A S . n C 2 4 G 4 4 4 G G S . n C 2 5 G 5 5 5 G G S . n C 2 6 UFT 6 6 6 UFT UFT S . n C 2 7 G 7 7 7 G G S . n C 2 8 CFZ 8 8 8 CFZ CFZ S . n C 2 9 UFT 9 9 9 UFT UFT S . n C 2 10 CFZ 10 10 10 CFZ CFZ S . n C 2 11 CFZ 11 11 11 CFZ CFZ S . n C 2 12 G 12 12 ? ? ? S . n C 2 13 A 13 13 ? ? ? S . n C 2 14 A 14 14 ? ? ? S . n C 2 15 A 15 15 ? ? ? S . n C 2 16 G 16 16 16 G G S . n C 2 17 G 17 17 17 G G S . n C 2 18 A 18 18 18 A A S . n C 2 19 A 19 19 19 A A S . n C 2 20 CFZ 20 20 20 CFZ CFZ S . n C 2 21 UFT 21 21 21 UFT UFT S . n C 2 22 CFZ 22 22 22 CFZ CFZ S . n C 2 23 CFZ 23 23 23 CFZ CFZ S . n C 2 24 A 24 24 ? ? ? S . n D 2 1 G 1 1 1 G G U . n D 2 2 G 2 2 2 G G U . n D 2 3 A 3 3 3 A A U . n D 2 4 G 4 4 4 G G U . n D 2 5 G 5 5 5 G G U . n D 2 6 UFT 6 6 6 UFT UFT U . n D 2 7 G 7 7 7 G G U . n D 2 8 CFZ 8 8 8 CFZ CFZ U . n D 2 9 UFT 9 9 9 UFT UFT U . n D 2 10 CFZ 10 10 10 CFZ CFZ U . n D 2 11 CFZ 11 11 11 CFZ CFZ U . n D 2 12 G 12 12 12 G G U . n D 2 13 A 13 13 13 A A U . n D 2 14 A 14 14 14 A A U . n D 2 15 A 15 15 15 A A U . n D 2 16 G 16 16 16 G G U . n D 2 17 G 17 17 17 G G U . n D 2 18 A 18 18 18 A A U . n D 2 19 A 19 19 19 A A U . n D 2 20 CFZ 20 20 20 CFZ CFZ U . n D 2 21 UFT 21 21 21 UFT UFT U . n D 2 22 CFZ 22 22 22 CFZ CFZ U . n D 2 23 CFZ 23 23 23 CFZ CFZ U . n D 2 24 A 24 24 24 A A U . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero E 3 MAN 1 C MAN 1 L MAN 4 n E 3 MAN 2 C MAN 2 L MAN 5 n E 3 NDG 3 C NDG 3 L NDG 6 n E 3 GLA 4 C GLA 4 L GLA 7 n F 4 NDG 1 D NDG 1 M NDG 2 n F 4 NAG 2 D NAG 2 M NAG 3 n F 4 BMA 3 D BMA 3 M BMA 4 n F 4 MAN 4 D MAN 4 M MAN 5 n F 4 NAG 5 D NAG 5 M NAG 6 n F 4 GAL 6 D GAL 6 M GAL 7 n F 4 MAN 7 D MAN 7 M MAN 8 n F 4 FUL 8 D FUL 8 M FUL 1 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 CA 1 25 1 CA CA S . H 5 CA 1 25 2 CA CA U . I 6 HOH 1 11 11 HOH WAT A . I 6 HOH 2 12 12 HOH WAT A . I 6 HOH 3 13 13 HOH WAT A . I 6 HOH 4 19 19 HOH WAT A . I 6 HOH 5 22 22 HOH WAT A . I 6 HOH 6 23 23 HOH WAT A . I 6 HOH 7 25 25 HOH WAT A . I 6 HOH 8 26 26 HOH WAT A . I 6 HOH 9 27 27 HOH WAT A . I 6 HOH 10 30 30 HOH WAT A . I 6 HOH 11 32 32 HOH WAT A . I 6 HOH 12 33 33 HOH WAT A . I 6 HOH 13 34 34 HOH WAT A . I 6 HOH 14 37 37 HOH WAT A . I 6 HOH 15 39 39 HOH WAT A . I 6 HOH 16 43 43 HOH WAT A . I 6 HOH 17 47 47 HOH WAT A . I 6 HOH 18 51 51 HOH WAT A . I 6 HOH 19 53 53 HOH WAT A . I 6 HOH 20 55 55 HOH WAT A . I 6 HOH 21 58 58 HOH WAT A . I 6 HOH 22 60 60 HOH WAT A . I 6 HOH 23 61 61 HOH WAT A . I 6 HOH 24 62 62 HOH WAT A . I 6 HOH 25 64 64 HOH WAT A . I 6 HOH 26 65 65 HOH WAT A . I 6 HOH 27 66 66 HOH WAT A . I 6 HOH 28 76 76 HOH WAT A . I 6 HOH 29 80 80 HOH WAT A . I 6 HOH 30 81 81 HOH WAT A . I 6 HOH 31 85 85 HOH WAT A . I 6 HOH 32 86 86 HOH WAT A . I 6 HOH 33 89 89 HOH WAT A . I 6 HOH 34 93 93 HOH WAT A . I 6 HOH 35 99 99 HOH WAT A . I 6 HOH 36 100 100 HOH WAT A . I 6 HOH 37 101 101 HOH WAT A . I 6 HOH 38 103 103 HOH WAT A . I 6 HOH 39 110 110 HOH WAT A . I 6 HOH 40 113 113 HOH WAT A . I 6 HOH 41 116 116 HOH WAT A . I 6 HOH 42 121 121 HOH WAT A . I 6 HOH 43 123 123 HOH WAT A . I 6 HOH 44 129 129 HOH WAT A . I 6 HOH 45 130 130 HOH WAT A . I 6 HOH 46 131 131 HOH WAT A . I 6 HOH 47 133 133 HOH WAT A . I 6 HOH 48 136 136 HOH WAT A . I 6 HOH 49 141 141 HOH WAT A . I 6 HOH 50 142 142 HOH WAT A . I 6 HOH 51 144 144 HOH WAT A . I 6 HOH 52 149 149 HOH WAT A . I 6 HOH 53 151 151 HOH WAT A . I 6 HOH 54 153 153 HOH WAT A . I 6 HOH 55 159 159 HOH WAT A . I 6 HOH 56 160 160 HOH WAT A . I 6 HOH 57 161 161 HOH WAT A . I 6 HOH 58 162 162 HOH WAT A . I 6 HOH 59 163 163 HOH WAT A . I 6 HOH 60 165 165 HOH WAT A . I 6 HOH 61 166 166 HOH WAT A . I 6 HOH 62 167 167 HOH WAT A . I 6 HOH 63 168 168 HOH WAT A . I 6 HOH 64 169 169 HOH WAT A . I 6 HOH 65 170 170 HOH WAT A . I 6 HOH 66 171 171 HOH WAT A . I 6 HOH 67 193 193 HOH WAT A . I 6 HOH 68 197 197 HOH WAT A . I 6 HOH 69 198 198 HOH WAT A . I 6 HOH 70 207 207 HOH WAT A . I 6 HOH 71 208 208 HOH WAT A . I 6 HOH 72 210 210 HOH WAT A . I 6 HOH 73 211 211 HOH WAT A . I 6 HOH 74 212 212 HOH WAT A . I 6 HOH 75 213 213 HOH WAT A . I 6 HOH 76 214 214 HOH WAT A . I 6 HOH 77 215 215 HOH WAT A . I 6 HOH 78 216 216 HOH WAT A . I 6 HOH 79 217 217 HOH WAT A . I 6 HOH 80 218 218 HOH WAT A . I 6 HOH 81 230 230 HOH WAT A . I 6 HOH 82 448 4 HOH WAT A . I 6 HOH 83 449 6 HOH WAT A . I 6 HOH 84 450 238 HOH WAT A . I 6 HOH 85 451 239 HOH WAT A . I 6 HOH 86 452 240 HOH WAT A . I 6 HOH 87 453 241 HOH WAT A . I 6 HOH 88 454 242 HOH WAT A . J 6 HOH 1 9 9 HOH WAT B . J 6 HOH 2 10 10 HOH WAT B . J 6 HOH 3 14 14 HOH WAT B . J 6 HOH 4 15 15 HOH WAT B . J 6 HOH 5 16 16 HOH WAT B . J 6 HOH 6 17 17 HOH WAT B . J 6 HOH 7 18 18 HOH WAT B . J 6 HOH 8 20 20 HOH WAT B . J 6 HOH 9 21 21 HOH WAT B . J 6 HOH 10 24 24 HOH WAT B . J 6 HOH 11 28 28 HOH WAT B . J 6 HOH 12 29 29 HOH WAT B . J 6 HOH 13 31 31 HOH WAT B . J 6 HOH 14 35 35 HOH WAT B . J 6 HOH 15 36 36 HOH WAT B . J 6 HOH 16 38 38 HOH WAT B . J 6 HOH 17 40 40 HOH WAT B . J 6 HOH 18 42 42 HOH WAT B . J 6 HOH 19 44 44 HOH WAT B . J 6 HOH 20 45 45 HOH WAT B . J 6 HOH 21 46 46 HOH WAT B . J 6 HOH 22 50 50 HOH WAT B . J 6 HOH 23 52 52 HOH WAT B . J 6 HOH 24 56 56 HOH WAT B . J 6 HOH 25 59 59 HOH WAT B . J 6 HOH 26 63 63 HOH WAT B . J 6 HOH 27 67 67 HOH WAT B . J 6 HOH 28 68 68 HOH WAT B . J 6 HOH 29 70 70 HOH WAT B . J 6 HOH 30 71 71 HOH WAT B . J 6 HOH 31 72 72 HOH WAT B . J 6 HOH 32 73 73 HOH WAT B . J 6 HOH 33 74 74 HOH WAT B . J 6 HOH 34 77 77 HOH WAT B . J 6 HOH 35 79 79 HOH WAT B . J 6 HOH 36 83 83 HOH WAT B . J 6 HOH 37 87 87 HOH WAT B . J 6 HOH 38 88 88 HOH WAT B . J 6 HOH 39 90 90 HOH WAT B . J 6 HOH 40 91 91 HOH WAT B . J 6 HOH 41 92 92 HOH WAT B . J 6 HOH 42 94 94 HOH WAT B . J 6 HOH 43 95 95 HOH WAT B . J 6 HOH 44 96 96 HOH WAT B . J 6 HOH 45 102 102 HOH WAT B . J 6 HOH 46 104 104 HOH WAT B . J 6 HOH 47 105 105 HOH WAT B . J 6 HOH 48 106 106 HOH WAT B . J 6 HOH 49 107 107 HOH WAT B . J 6 HOH 50 108 108 HOH WAT B . J 6 HOH 51 109 109 HOH WAT B . J 6 HOH 52 111 111 HOH WAT B . J 6 HOH 53 112 112 HOH WAT B . J 6 HOH 54 114 114 HOH WAT B . J 6 HOH 55 115 115 HOH WAT B . J 6 HOH 56 118 118 HOH WAT B . J 6 HOH 57 122 122 HOH WAT B . J 6 HOH 58 124 124 HOH WAT B . J 6 HOH 59 125 125 HOH WAT B . J 6 HOH 60 126 126 HOH WAT B . J 6 HOH 61 127 127 HOH WAT B . J 6 HOH 62 132 132 HOH WAT B . J 6 HOH 63 137 137 HOH WAT B . J 6 HOH 64 138 138 HOH WAT B . J 6 HOH 65 139 139 HOH WAT B . J 6 HOH 66 140 140 HOH WAT B . J 6 HOH 67 143 143 HOH WAT B . J 6 HOH 68 145 145 HOH WAT B . J 6 HOH 69 147 147 HOH WAT B . J 6 HOH 70 150 150 HOH WAT B . J 6 HOH 71 154 154 HOH WAT B . J 6 HOH 72 155 155 HOH WAT B . J 6 HOH 73 156 156 HOH WAT B . J 6 HOH 74 157 157 HOH WAT B . J 6 HOH 75 164 164 HOH WAT B . J 6 HOH 76 172 172 HOH WAT B . J 6 HOH 77 173 173 HOH WAT B . J 6 HOH 78 174 174 HOH WAT B . J 6 HOH 79 175 175 HOH WAT B . J 6 HOH 80 176 176 HOH WAT B . J 6 HOH 81 177 177 HOH WAT B . J 6 HOH 82 178 178 HOH WAT B . J 6 HOH 83 179 179 HOH WAT B . J 6 HOH 84 180 180 HOH WAT B . J 6 HOH 85 181 181 HOH WAT B . J 6 HOH 86 182 182 HOH WAT B . J 6 HOH 87 183 183 HOH WAT B . J 6 HOH 88 184 184 HOH WAT B . J 6 HOH 89 185 185 HOH WAT B . J 6 HOH 90 186 186 HOH WAT B . J 6 HOH 91 187 187 HOH WAT B . J 6 HOH 92 188 188 HOH WAT B . J 6 HOH 93 189 189 HOH WAT B . J 6 HOH 94 190 190 HOH WAT B . J 6 HOH 95 191 191 HOH WAT B . J 6 HOH 96 194 194 HOH WAT B . J 6 HOH 97 195 195 HOH WAT B . J 6 HOH 98 196 196 HOH WAT B . J 6 HOH 99 201 201 HOH WAT B . J 6 HOH 100 202 202 HOH WAT B . J 6 HOH 101 203 203 HOH WAT B . J 6 HOH 102 204 204 HOH WAT B . J 6 HOH 103 205 205 HOH WAT B . J 6 HOH 104 209 209 HOH WAT B . J 6 HOH 105 219 219 HOH WAT B . J 6 HOH 106 220 220 HOH WAT B . J 6 HOH 107 221 221 HOH WAT B . J 6 HOH 108 222 222 HOH WAT B . J 6 HOH 109 223 223 HOH WAT B . J 6 HOH 110 224 224 HOH WAT B . J 6 HOH 111 225 225 HOH WAT B . J 6 HOH 112 226 226 HOH WAT B . J 6 HOH 113 227 227 HOH WAT B . J 6 HOH 114 228 228 HOH WAT B . J 6 HOH 115 229 229 HOH WAT B . J 6 HOH 116 231 231 HOH WAT B . J 6 HOH 117 232 232 HOH WAT B . J 6 HOH 118 448 1 HOH WAT B . J 6 HOH 119 449 2 HOH WAT B . J 6 HOH 120 450 5 HOH WAT B . J 6 HOH 121 451 7 HOH WAT B . J 6 HOH 122 452 8 HOH WAT B . J 6 HOH 123 453 237 HOH WAT B . J 6 HOH 124 454 243 HOH WAT B . J 6 HOH 125 455 250 HOH WAT B . J 6 HOH 126 456 251 HOH WAT B . K 6 HOH 1 48 48 HOH WAT S . K 6 HOH 2 57 57 HOH WAT S . K 6 HOH 3 75 75 HOH WAT S . K 6 HOH 4 98 98 HOH WAT S . K 6 HOH 5 120 120 HOH WAT S . K 6 HOH 6 135 135 HOH WAT S . K 6 HOH 7 152 152 HOH WAT S . K 6 HOH 8 158 158 HOH WAT S . K 6 HOH 9 235 235 HOH WAT S . K 6 HOH 10 236 236 HOH WAT S . K 6 HOH 11 247 247 HOH WAT S . K 6 HOH 12 248 248 HOH WAT S . K 6 HOH 13 249 249 HOH WAT S . K 6 HOH 14 252 252 HOH WAT S . L 6 HOH 1 26 3 HOH WAT U . L 6 HOH 2 41 41 HOH WAT U . L 6 HOH 3 49 49 HOH WAT U . L 6 HOH 4 54 54 HOH WAT U . L 6 HOH 5 69 69 HOH WAT U . L 6 HOH 6 78 78 HOH WAT U . L 6 HOH 7 82 82 HOH WAT U . L 6 HOH 8 84 84 HOH WAT U . L 6 HOH 9 97 97 HOH WAT U . L 6 HOH 10 117 117 HOH WAT U . L 6 HOH 11 119 119 HOH WAT U . L 6 HOH 12 128 128 HOH WAT U . L 6 HOH 13 134 134 HOH WAT U . L 6 HOH 14 146 146 HOH WAT U . L 6 HOH 15 148 148 HOH WAT U . L 6 HOH 16 192 192 HOH WAT U . L 6 HOH 17 199 199 HOH WAT U . L 6 HOH 18 200 200 HOH WAT U . L 6 HOH 19 206 206 HOH WAT U . L 6 HOH 20 233 233 HOH WAT U . L 6 HOH 21 234 234 HOH WAT U . L 6 HOH 22 244 244 HOH WAT U . L 6 HOH 23 245 245 HOH WAT U . L 6 HOH 24 246 246 HOH WAT U . L 6 HOH 25 253 253 HOH WAT U . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 S G 16 ? P ? C G 16 P 2 1 Y 1 S G 16 ? OP1 ? C G 16 OP1 3 1 Y 1 S G 16 ? OP2 ? C G 16 OP2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 MOLREP phasing . ? 2 CNS refinement 1.2 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 3AGV _cell.length_a 83.587 _cell.length_b 107.238 _cell.length_c 79.458 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3AGV _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3AGV _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.81 _exptl_crystal.density_percent_sol 56.19 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8 _exptl_crystal_grow.pdbx_details ;The solution stirring technique with a rotary shaker produced the best diffracting crystals, pH 8, VAPOR DIFFUSION, SITTING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2007-10-07 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL41XU' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL41XU _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 3AGV _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.4 _reflns.d_resolution_high 2.15 _reflns.number_obs 38726 _reflns.number_all ? _reflns.percent_possible_obs 98.3 _reflns.pdbx_Rmerge_I_obs 0.081 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 19.9 _reflns.pdbx_redundancy 5.1 _reflns.pdbx_netI_over_sigmaI ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.15 _reflns_shell.d_res_low 2.23 _reflns_shell.percent_possible_all 89.1 _reflns_shell.Rmerge_I_obs 0.433 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.4 _reflns_shell.pdbx_redundancy 5.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3417 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3AGV _refine.ls_number_reflns_obs 36041 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 68257.52 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.37 _refine.ls_d_res_high 2.15 _refine.ls_percent_reflns_obs 91.1 _refine.ls_R_factor_obs 0.237 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.237 _refine.ls_R_factor_R_free 0.277 _refine.ls_R_factor_R_free_error 0.007 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 54.6 _refine.aniso_B[1][1] -12.53 _refine.aniso_B[2][2] -7.72 _refine.aniso_B[3][3] 20.25 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.4 _refine.solvent_model_param_bsol 65.8389 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'BULK SOLVENT MODEL USED' _refine.pdbx_starting_model 'PDB ENTRY 1FC1' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3AGV _refine_analyze.Luzzati_coordinate_error_obs 0.31 _refine_analyze.Luzzati_sigma_a_obs 0.38 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.37 _refine_analyze.Luzzati_sigma_a_free 0.40 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3097 _refine_hist.pdbx_number_atoms_nucleic_acid 916 _refine_hist.pdbx_number_atoms_ligand 147 _refine_hist.number_atoms_solvent 253 _refine_hist.number_atoms_total 4413 _refine_hist.d_res_high 2.15 _refine_hist.d_res_low 30.37 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 24.4 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.10 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.41 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.37 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 4.45 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 5.47 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.15 _refine_ls_shell.d_res_low 2.28 _refine_ls_shell.number_reflns_R_work 4696 _refine_ls_shell.R_factor_R_work 0.325 _refine_ls_shell.percent_reflns_obs 76.5 _refine_ls_shell.R_factor_R_free 0.349 _refine_ls_shell.R_factor_R_free_error 0.022 _refine_ls_shell.percent_reflns_R_free 5.3 _refine_ls_shell.number_reflns_R_free 263 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 water_rep.param water.top 'X-RAY DIFFRACTION' 3 ion.param ion.top # _database_PDB_matrix.entry_id 3AGV _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3AGV _struct.title 'Crystal structure of a human IgG-aptamer complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3AGV _struct_keywords.pdbx_keywords 'Immune System/RNA' _struct_keywords.text 'IgG, RNA Aptamer, Immune System-RNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 5 ? H N N 5 ? I N N 6 ? J N N 6 ? K N N 6 ? L N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP IGHG1_HUMAN P01857 1 ;GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG KEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK ; 120 ? 2 PDB 3AGV 3AGV 2 GGAGGUGXUXXGAAAGGAAXUXXA 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3AGV A 1 ? 211 ? P01857 120 ? 330 ? 237 447 2 1 3AGV B 1 ? 211 ? P01857 120 ? 330 ? 237 447 3 2 3AGV S 1 ? 24 ? 3AGV 1 ? 24 ? 1 24 4 2 3AGV U 1 ? 24 ? 3AGV 1 ? 24 ? 1 24 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 10 ? MET A 16 ? LYS A 246 MET A 252 1 ? 7 HELX_P HELX_P2 2 LEU A 73 ? ASN A 79 ? LEU A 309 ASN A 315 1 ? 7 HELX_P HELX_P3 3 SER A 118 ? LYS A 124 ? SER A 354 LYS A 360 5 ? 7 HELX_P HELX_P4 4 LYS A 178 ? GLN A 183 ? LYS A 414 GLN A 419 1 ? 6 HELX_P HELX_P5 5 LEU A 196 ? ASN A 198 ? LEU A 432 ASN A 434 5 ? 3 HELX_P HELX_P6 6 LYS B 10 ? MET B 16 ? LYS B 246 MET B 252 1 ? 7 HELX_P HELX_P7 7 LEU B 73 ? GLY B 80 ? LEU B 309 GLY B 316 1 ? 8 HELX_P HELX_P8 8 SER B 118 ? LYS B 124 ? SER B 354 LYS B 360 5 ? 7 HELX_P HELX_P9 9 LYS B 178 ? GLN B 183 ? LYS B 414 GLN B 419 1 ? 6 HELX_P HELX_P10 10 LEU B 196 ? ASN B 198 ? LEU B 432 ASN B 434 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 25 SG ? ? ? 1_555 A CYS 85 SG ? ? A CYS 261 A CYS 321 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf2 disulf ? ? A CYS 131 SG ? ? ? 1_555 A CYS 189 SG ? ? A CYS 367 A CYS 425 1_555 ? ? ? ? ? ? ? 2.026 ? ? disulf3 disulf ? ? B CYS 25 SG ? ? ? 1_555 B CYS 85 SG ? ? B CYS 261 B CYS 321 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf4 disulf ? ? B CYS 131 SG ? ? ? 1_555 B CYS 189 SG ? ? B CYS 367 B CYS 425 1_555 ? ? ? ? ? ? ? 2.028 ? ? covale1 covale both ? C G 5 "O3'" ? ? ? 1_555 C UFT 6 P ? ? S G 5 S UFT 6 1_555 ? ? ? ? ? ? ? 1.612 ? ? covale2 covale both ? C UFT 6 "O3'" ? ? ? 1_555 C G 7 P ? ? S UFT 6 S G 7 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale3 covale both ? C G 7 "O3'" ? ? ? 1_555 C CFZ 8 P ? ? S G 7 S CFZ 8 1_555 ? ? ? ? ? ? ? 1.605 ? ? covale4 covale both ? C CFZ 8 "O3'" ? ? ? 1_555 C UFT 9 P ? ? S CFZ 8 S UFT 9 1_555 ? ? ? ? ? ? ? 1.610 ? ? covale5 covale both ? C UFT 9 "O3'" ? ? ? 1_555 C CFZ 10 P ? ? S UFT 9 S CFZ 10 1_555 ? ? ? ? ? ? ? 1.602 ? ? covale6 covale both ? C CFZ 10 "O3'" ? ? ? 1_555 C CFZ 11 P ? ? S CFZ 10 S CFZ 11 1_555 ? ? ? ? ? ? ? 1.615 ? ? covale7 covale both ? C A 19 "O3'" ? ? ? 1_555 C CFZ 20 P ? ? S A 19 S CFZ 20 1_555 ? ? ? ? ? ? ? 1.603 ? ? covale8 covale both ? C CFZ 20 "O3'" ? ? ? 1_555 C UFT 21 P ? ? S CFZ 20 S UFT 21 1_555 ? ? ? ? ? ? ? 1.603 ? ? covale9 covale both ? C UFT 21 "O3'" ? ? ? 1_555 C CFZ 22 P ? ? S UFT 21 S CFZ 22 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale10 covale both ? C CFZ 22 "O3'" ? ? ? 1_555 C CFZ 23 P ? ? S CFZ 22 S CFZ 23 1_555 ? ? ? ? ? ? ? 1.614 ? ? covale11 covale both ? D G 5 "O3'" ? ? ? 1_555 D UFT 6 P ? ? U G 5 U UFT 6 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale12 covale both ? D UFT 6 "O3'" ? ? ? 1_555 D G 7 P ? ? U UFT 6 U G 7 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale13 covale both ? D G 7 "O3'" ? ? ? 1_555 D CFZ 8 P ? ? U G 7 U CFZ 8 1_555 ? ? ? ? ? ? ? 1.602 ? ? covale14 covale both ? D CFZ 8 "O3'" ? ? ? 1_555 D UFT 9 P ? ? U CFZ 8 U UFT 9 1_555 ? ? ? ? ? ? ? 1.602 ? ? covale15 covale both ? D UFT 9 "O3'" ? ? ? 1_555 D CFZ 10 P ? ? U UFT 9 U CFZ 10 1_555 ? ? ? ? ? ? ? 1.605 ? ? covale16 covale both ? D CFZ 10 "O3'" ? ? ? 1_555 D CFZ 11 P ? ? U CFZ 10 U CFZ 11 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale17 covale both ? D CFZ 11 "O3'" ? ? ? 1_555 D G 12 P ? ? U CFZ 11 U G 12 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale18 covale both ? D A 19 "O3'" ? ? ? 1_555 D CFZ 20 P ? ? U A 19 U CFZ 20 1_555 ? ? ? ? ? ? ? 1.605 ? ? covale19 covale both ? D CFZ 20 "O3'" ? ? ? 1_555 D UFT 21 P ? ? U CFZ 20 U UFT 21 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale20 covale both ? D UFT 21 "O3'" ? ? ? 1_555 D CFZ 22 P ? ? U UFT 21 U CFZ 22 1_555 ? ? ? ? ? ? ? 1.605 ? ? covale21 covale both ? D CFZ 22 "O3'" ? ? ? 1_555 D CFZ 23 P ? ? U CFZ 22 U CFZ 23 1_555 ? ? ? ? ? ? ? 1.610 ? ? covale22 covale both ? D CFZ 23 "O3'" ? ? ? 1_555 D A 24 P ? ? U CFZ 23 U A 24 1_555 ? ? ? ? ? ? ? 1.599 ? ? covale23 covale both ? E MAN . O6 ? ? ? 1_555 E MAN . C1 ? ? C MAN 1 C MAN 2 1_555 ? ? ? ? ? ? ? 1.402 ? ? covale24 covale both ? E MAN . O2 ? ? ? 1_555 E NDG . C1 ? ? C MAN 2 C NDG 3 1_555 ? ? ? ? ? ? ? 1.402 ? ? covale25 covale both ? E NDG . O4 ? ? ? 1_555 E GLA . C1 ? ? C NDG 3 C GLA 4 1_555 ? ? ? ? ? ? ? 1.400 ? ? covale26 covale both ? F NDG . O4 ? ? ? 1_555 F NAG . C1 ? ? D NDG 1 D NAG 2 1_555 ? ? ? ? ? ? ? 1.402 ? ? covale27 covale both ? F NDG . O6 ? ? ? 1_555 F FUL . C1 ? ? D NDG 1 D FUL 8 1_555 ? ? ? ? ? ? ? 1.403 ? ? covale28 covale both ? F NAG . O4 ? ? ? 1_555 F BMA . C1 ? ? D NAG 2 D BMA 3 1_555 ? ? ? ? ? ? ? 1.399 ? ? covale29 covale both ? F BMA . O6 ? ? ? 1_555 F MAN . C1 ? ? D BMA 3 D MAN 4 1_555 ? ? ? ? ? ? ? 1.388 ? ? covale30 covale both ? F BMA . O3 ? ? ? 1_555 F MAN . C1 ? ? D BMA 3 D MAN 7 1_555 ? ? ? ? ? ? ? 1.399 ? ? covale31 covale both ? F MAN . O2 ? ? ? 1_555 F NAG . C1 ? ? D MAN 4 D NAG 5 1_555 ? ? ? ? ? ? ? 1.392 ? ? covale32 covale both ? F NAG . O4 ? ? ? 1_555 F GAL . C1 ? ? D NAG 5 D GAL 6 1_555 ? ? ? ? ? ? ? 1.398 ? ? metalc1 metalc ? ? C G 7 OP2 ? ? ? 1_555 G CA . CA ? ? S G 7 S CA 25 1_555 ? ? ? ? ? ? ? 2.680 ? ? metalc2 metalc ? ? G CA . CA ? ? ? 1_555 K HOH . O ? ? S CA 25 S HOH 235 1_555 ? ? ? ? ? ? ? 2.488 ? ? metalc3 metalc ? ? G CA . CA ? ? ? 1_555 K HOH . O ? ? S CA 25 S HOH 236 1_555 ? ? ? ? ? ? ? 2.334 ? ? metalc4 metalc ? ? G CA . CA ? ? ? 1_555 K HOH . O ? ? S CA 25 S HOH 247 1_555 ? ? ? ? ? ? ? 2.524 ? ? metalc5 metalc ? ? G CA . CA ? ? ? 1_555 K HOH . O ? ? S CA 25 S HOH 248 1_555 ? ? ? ? ? ? ? 2.370 ? ? metalc6 metalc ? ? G CA . CA ? ? ? 1_555 K HOH . O ? ? S CA 25 S HOH 249 1_555 ? ? ? ? ? ? ? 2.034 ? ? metalc7 metalc ? ? D G 7 OP2 ? ? ? 1_555 H CA . CA ? ? U G 7 U CA 25 1_555 ? ? ? ? ? ? ? 2.426 ? ? metalc8 metalc ? ? H CA . CA ? ? ? 1_555 L HOH . O ? ? U CA 25 U HOH 233 1_555 ? ? ? ? ? ? ? 2.518 ? ? metalc9 metalc ? ? H CA . CA ? ? ? 1_555 L HOH . O ? ? U CA 25 U HOH 234 1_555 ? ? ? ? ? ? ? 2.281 ? ? metalc10 metalc ? ? H CA . CA ? ? ? 1_555 L HOH . O ? ? U CA 25 U HOH 244 1_555 ? ? ? ? ? ? ? 2.638 ? ? hydrog1 hydrog ? ? C A 3 N1 ? ? ? 1_555 C UFT 21 N3 ? ? S A 3 S UFT 21 1_555 ? ? ? ? ? ? 'A-UFT PAIR' ? ? ? hydrog2 hydrog ? ? C G 5 N2 ? ? ? 1_555 C A 19 N7 ? ? S G 5 S A 19 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog3 hydrog ? ? C G 5 N3 ? ? ? 1_555 C A 19 N6 ? ? S G 5 S A 19 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog4 hydrog ? ? C UFT 6 N3 ? ? ? 1_555 C A 18 N7 ? ? S UFT 6 S A 18 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog5 hydrog ? ? C UFT 6 O2 ? ? ? 1_555 C A 18 N6 ? ? S UFT 6 S A 18 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog6 hydrog ? ? C UFT 9 N3 ? ? ? 1_555 C A 18 N1 ? ? S UFT 9 S A 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C UFT 9 O4 ? ? ? 1_555 C A 18 N6 ? ? S UFT 9 S A 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? D A 3 N1 ? ? ? 1_555 D UFT 21 N3 ? ? U A 3 U UFT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? D A 3 N6 ? ? ? 1_555 D UFT 21 O4 ? ? U A 3 U UFT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? D G 5 N2 ? ? ? 1_555 D A 19 N7 ? ? U G 5 U A 19 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog11 hydrog ? ? D G 5 N3 ? ? ? 1_555 D A 19 N6 ? ? U G 5 U A 19 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog12 hydrog ? ? D UFT 6 N3 ? ? ? 1_555 D A 18 N7 ? ? U UFT 6 U A 18 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog13 hydrog ? ? D UFT 6 O2 ? ? ? 1_555 D A 18 N6 ? ? U UFT 6 U A 18 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog14 hydrog ? ? D UFT 9 N3 ? ? ? 1_555 D A 18 N1 ? ? U UFT 9 U A 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? D UFT 9 O4 ? ? ? 1_555 D A 18 N6 ? ? U UFT 9 U A 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP2 ? C G 7 ? S G 7 ? 1_555 CA ? G CA . ? S CA 25 ? 1_555 O ? K HOH . ? S HOH 235 ? 1_555 102.4 ? 2 OP2 ? C G 7 ? S G 7 ? 1_555 CA ? G CA . ? S CA 25 ? 1_555 O ? K HOH . ? S HOH 236 ? 1_555 64.9 ? 3 O ? K HOH . ? S HOH 235 ? 1_555 CA ? G CA . ? S CA 25 ? 1_555 O ? K HOH . ? S HOH 236 ? 1_555 149.7 ? 4 OP2 ? C G 7 ? S G 7 ? 1_555 CA ? G CA . ? S CA 25 ? 1_555 O ? K HOH . ? S HOH 247 ? 1_555 62.2 ? 5 O ? K HOH . ? S HOH 235 ? 1_555 CA ? G CA . ? S CA 25 ? 1_555 O ? K HOH . ? S HOH 247 ? 1_555 77.1 ? 6 O ? K HOH . ? S HOH 236 ? 1_555 CA ? G CA . ? S CA 25 ? 1_555 O ? K HOH . ? S HOH 247 ? 1_555 72.7 ? 7 OP2 ? C G 7 ? S G 7 ? 1_555 CA ? G CA . ? S CA 25 ? 1_555 O ? K HOH . ? S HOH 248 ? 1_555 96.0 ? 8 O ? K HOH . ? S HOH 235 ? 1_555 CA ? G CA . ? S CA 25 ? 1_555 O ? K HOH . ? S HOH 248 ? 1_555 83.4 ? 9 O ? K HOH . ? S HOH 236 ? 1_555 CA ? G CA . ? S CA 25 ? 1_555 O ? K HOH . ? S HOH 248 ? 1_555 123.8 ? 10 O ? K HOH . ? S HOH 247 ? 1_555 CA ? G CA . ? S CA 25 ? 1_555 O ? K HOH . ? S HOH 248 ? 1_555 145.9 ? 11 OP2 ? C G 7 ? S G 7 ? 1_555 CA ? G CA . ? S CA 25 ? 1_555 O ? K HOH . ? S HOH 249 ? 1_555 140.8 ? 12 O ? K HOH . ? S HOH 235 ? 1_555 CA ? G CA . ? S CA 25 ? 1_555 O ? K HOH . ? S HOH 249 ? 1_555 107.8 ? 13 O ? K HOH . ? S HOH 236 ? 1_555 CA ? G CA . ? S CA 25 ? 1_555 O ? K HOH . ? S HOH 249 ? 1_555 76.5 ? 14 O ? K HOH . ? S HOH 247 ? 1_555 CA ? G CA . ? S CA 25 ? 1_555 O ? K HOH . ? S HOH 249 ? 1_555 100.8 ? 15 O ? K HOH . ? S HOH 248 ? 1_555 CA ? G CA . ? S CA 25 ? 1_555 O ? K HOH . ? S HOH 249 ? 1_555 111.7 ? 16 OP2 ? D G 7 ? U G 7 ? 1_555 CA ? H CA . ? U CA 25 ? 1_555 O ? L HOH . ? U HOH 233 ? 1_555 93.6 ? 17 OP2 ? D G 7 ? U G 7 ? 1_555 CA ? H CA . ? U CA 25 ? 1_555 O ? L HOH . ? U HOH 234 ? 1_555 92.3 ? 18 O ? L HOH . ? U HOH 233 ? 1_555 CA ? H CA . ? U CA 25 ? 1_555 O ? L HOH . ? U HOH 234 ? 1_555 163.4 ? 19 OP2 ? D G 7 ? U G 7 ? 1_555 CA ? H CA . ? U CA 25 ? 1_555 O ? L HOH . ? U HOH 244 ? 1_555 156.4 ? 20 O ? L HOH . ? U HOH 233 ? 1_555 CA ? H CA . ? U CA 25 ? 1_555 O ? L HOH . ? U HOH 244 ? 1_555 69.2 ? 21 O ? L HOH . ? U HOH 234 ? 1_555 CA ? H CA . ? U CA 25 ? 1_555 O ? L HOH . ? U HOH 244 ? 1_555 108.9 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 25 ? CYS A 85 ? CYS A 261 ? 1_555 CYS A 321 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 131 ? CYS A 189 ? CYS A 367 ? 1_555 CYS A 425 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS B 25 ? CYS B 85 ? CYS B 261 ? 1_555 CYS B 321 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS B 131 ? CYS B 189 ? CYS B 367 ? 1_555 CYS B 425 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 137 A . ? TYR 373 A PRO 138 A ? PRO 374 A 1 0.23 2 TYR 137 B . ? TYR 373 B PRO 138 B ? PRO 374 B 1 -0.41 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? C ? 4 ? D ? 4 ? E ? 4 ? F ? 4 ? G ? 4 ? H ? 4 ? I ? 4 ? J ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel H 1 2 ? anti-parallel H 2 3 ? anti-parallel H 3 4 ? anti-parallel I 1 2 ? anti-parallel I 2 3 ? anti-parallel I 3 4 ? anti-parallel J 1 2 ? anti-parallel J 2 3 ? anti-parallel J 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 22 ? THR A 24 ? GLU A 258 THR A 260 A 2 VAL A 69 ? THR A 71 ? VAL A 305 THR A 307 B 1 VAL A 46 ? VAL A 48 ? VAL A 282 VAL A 284 B 2 TRP A 41 ? VAL A 43 ? TRP A 277 VAL A 279 B 3 TYR A 83 ? LYS A 84 ? TYR A 319 LYS A 320 C 1 GLN A 111 ? LEU A 115 ? GLN A 347 LEU A 351 C 2 GLN A 126 ? PHE A 136 ? GLN A 362 PHE A 372 C 3 PHE A 168 ? ASP A 177 ? PHE A 404 ASP A 413 C 4 TYR A 155 ? THR A 157 ? TYR A 391 THR A 393 D 1 GLN A 111 ? LEU A 115 ? GLN A 347 LEU A 351 D 2 GLN A 126 ? PHE A 136 ? GLN A 362 PHE A 372 D 3 PHE A 168 ? ASP A 177 ? PHE A 404 ASP A 413 D 4 VAL A 161 ? LEU A 162 ? VAL A 397 LEU A 398 E 1 GLN A 150 ? PRO A 151 ? GLN A 386 PRO A 387 E 2 ALA A 142 ? SER A 147 ? ALA A 378 SER A 383 E 3 PHE A 187 ? MET A 192 ? PHE A 423 MET A 428 E 4 TYR A 200 ? LEU A 205 ? TYR A 436 LEU A 441 F 1 SER B 3 ? PHE B 7 ? SER B 239 PHE B 243 F 2 GLU B 22 ? VAL B 30 ? GLU B 258 VAL B 266 F 3 THR B 63 ? THR B 71 ? THR B 299 THR B 307 F 4 LYS B 52 ? GLN B 59 ? LYS B 288 GLN B 295 G 1 VAL B 46 ? VAL B 48 ? VAL B 282 VAL B 284 G 2 LYS B 38 ? VAL B 43 ? LYS B 274 VAL B 279 G 3 TYR B 83 ? SER B 88 ? TYR B 319 SER B 324 G 4 ILE B 96 ? ILE B 100 ? ILE B 332 ILE B 336 H 1 GLN B 111 ? LEU B 115 ? GLN B 347 LEU B 351 H 2 GLN B 126 ? PHE B 136 ? GLN B 362 PHE B 372 H 3 PHE B 168 ? ASP B 177 ? PHE B 404 ASP B 413 H 4 TYR B 155 ? THR B 157 ? TYR B 391 THR B 393 I 1 GLN B 111 ? LEU B 115 ? GLN B 347 LEU B 351 I 2 GLN B 126 ? PHE B 136 ? GLN B 362 PHE B 372 I 3 PHE B 168 ? ASP B 177 ? PHE B 404 ASP B 413 I 4 VAL B 161 ? LEU B 162 ? VAL B 397 LEU B 398 J 1 GLN B 150 ? GLU B 152 ? GLN B 386 GLU B 388 J 2 ALA B 142 ? SER B 147 ? ALA B 378 SER B 383 J 3 PHE B 187 ? MET B 192 ? PHE B 423 MET B 428 J 4 TYR B 200 ? LEU B 205 ? TYR B 436 LEU B 441 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 23 ? N VAL A 259 O LEU A 70 ? O LEU A 306 B 1 2 O VAL A 48 ? O VAL A 284 N TRP A 41 ? N TRP A 277 B 2 3 N TYR A 42 ? N TYR A 278 O LYS A 84 ? O LYS A 320 C 1 2 N TYR A 113 ? N TYR A 349 O LEU A 132 ? O LEU A 368 C 2 3 N LEU A 129 ? N LEU A 365 O LEU A 174 ? O LEU A 410 C 3 4 O LYS A 173 ? O LYS A 409 N LYS A 156 ? N LYS A 392 D 1 2 N TYR A 113 ? N TYR A 349 O LEU A 132 ? O LEU A 368 D 2 3 N LEU A 129 ? N LEU A 365 O LEU A 174 ? O LEU A 410 D 3 4 O PHE A 169 ? O PHE A 405 N VAL A 161 ? N VAL A 397 E 1 2 O GLN A 150 ? O GLN A 386 N SER A 147 ? N SER A 383 E 2 3 N GLU A 144 ? N GLU A 380 O SER A 190 ? O SER A 426 E 3 4 N CYS A 189 ? N CYS A 425 O LYS A 203 ? O LYS A 439 F 1 2 N PHE B 7 ? N PHE B 243 O THR B 24 ? O THR B 260 F 2 3 N VAL B 23 ? N VAL B 259 O LEU B 70 ? O LEU B 306 F 3 4 O THR B 63 ? O THR B 299 N GLN B 59 ? N GLN B 295 G 1 2 O VAL B 46 ? O VAL B 282 N VAL B 43 ? N VAL B 279 G 2 3 N ASN B 40 ? N ASN B 276 O LYS B 86 ? O LYS B 322 G 3 4 N TYR B 83 ? N TYR B 319 O ILE B 100 ? O ILE B 336 H 1 2 N TYR B 113 ? N TYR B 349 O LEU B 132 ? O LEU B 368 H 2 3 N LEU B 129 ? N LEU B 365 O LEU B 174 ? O LEU B 410 H 3 4 O LYS B 173 ? O LYS B 409 N LYS B 156 ? N LYS B 392 I 1 2 N TYR B 113 ? N TYR B 349 O LEU B 132 ? O LEU B 368 I 2 3 N LEU B 129 ? N LEU B 365 O LEU B 174 ? O LEU B 410 I 3 4 O PHE B 169 ? O PHE B 405 N VAL B 161 ? N VAL B 397 J 1 2 O GLN B 150 ? O GLN B 386 N SER B 147 ? N SER B 383 J 2 3 N GLU B 144 ? N GLU B 380 O SER B 190 ? O SER B 426 J 3 4 N VAL B 191 ? N VAL B 427 O THR B 201 ? O THR B 437 # _pdbx_entry_details.entry_id 3AGV _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 TYR _pdbx_validate_close_contact.auth_seq_id_1 436 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 216 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.14 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 "O4'" S CFZ 11 ? ? 1_555 "O2'" U A 24 ? ? 4_556 2.09 2 1 "O5'" S CFZ 11 ? ? 1_555 "O2'" U A 24 ? ? 4_556 2.11 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 261 ? ? -92.86 43.48 2 1 VAL A 282 ? ? -51.35 95.94 3 1 PRO A 291 ? ? -55.81 -149.69 4 1 GLU A 293 ? ? -121.13 -115.95 5 1 GLU A 294 ? ? -151.01 -155.90 6 1 GLN A 295 ? ? 20.25 -120.68 7 1 VAL A 303 ? ? 79.28 -145.45 8 1 SER A 304 ? ? 69.89 124.81 9 1 ARG B 292 ? ? -48.32 151.08 10 1 ASN B 297 ? ? -76.91 32.81 11 1 PRO B 329 ? ? -44.67 -73.88 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 C UFT 6 S UFT 6 ? DU ? 2 C CFZ 8 S CFZ 8 ? DC ? 3 C UFT 9 S UFT 9 ? DU ? 4 C CFZ 10 S CFZ 10 ? DC ? 5 C CFZ 11 S CFZ 11 ? DC ? 6 C CFZ 20 S CFZ 20 ? DC ? 7 C UFT 21 S UFT 21 ? DU ? 8 C CFZ 22 S CFZ 22 ? DC ? 9 C CFZ 23 S CFZ 23 ? DC ? 10 D UFT 6 U UFT 6 ? DU ? 11 D CFZ 8 U CFZ 8 ? DC ? 12 D UFT 9 U UFT 9 ? DU ? 13 D CFZ 10 U CFZ 10 ? DC ? 14 D CFZ 11 U CFZ 11 ? DC ? 15 D CFZ 20 U CFZ 20 ? DC ? 16 D UFT 21 U UFT 21 ? DU ? 17 D CFZ 22 U CFZ 22 ? DC ? 18 D CFZ 23 U CFZ 23 ? DC ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 237 ? A GLY 1 2 1 Y 1 A PRO 238 ? A PRO 2 3 1 Y 1 A SER 239 ? A SER 3 4 1 Y 1 A VAL 240 ? A VAL 4 5 1 Y 1 A VAL 263 ? A VAL 27 6 1 Y 1 A VAL 264 ? A VAL 28 7 1 Y 1 A ASP 265 ? A ASP 29 8 1 Y 1 A VAL 266 ? A VAL 30 9 1 Y 1 A SER 267 ? A SER 31 10 1 Y 1 A HIS 268 ? A HIS 32 11 1 Y 1 A GLU 269 ? A GLU 33 12 1 Y 1 A ASP 270 ? A ASP 34 13 1 Y 1 A PRO 271 ? A PRO 35 14 1 Y 1 A ASN 297 ? A ASN 61 15 1 Y 1 A SER 298 ? A SER 62 16 1 Y 1 A THR 299 ? A THR 63 17 1 Y 1 A TYR 300 ? A TYR 64 18 1 Y 1 A ARG 301 ? A ARG 65 19 1 Y 1 A LYS 322 ? A LYS 86 20 1 Y 1 A VAL 323 ? A VAL 87 21 1 Y 1 A SER 324 ? A SER 88 22 1 Y 1 A ASN 325 ? A ASN 89 23 1 Y 1 A LYS 326 ? A LYS 90 24 1 Y 1 A ALA 327 ? A ALA 91 25 1 Y 1 A LEU 328 ? A LEU 92 26 1 Y 1 A PRO 329 ? A PRO 93 27 1 Y 1 A ALA 330 ? A ALA 94 28 1 Y 1 A PRO 331 ? A PRO 95 29 1 Y 1 A ILE 332 ? A ILE 96 30 1 Y 1 A GLU 333 ? A GLU 97 31 1 Y 1 A SER 444 ? A SER 208 32 1 Y 1 A PRO 445 ? A PRO 209 33 1 Y 1 A GLY 446 ? A GLY 210 34 1 Y 1 A LYS 447 ? A LYS 211 35 1 Y 1 B PRO 445 ? B PRO 209 36 1 Y 1 B GLY 446 ? B GLY 210 37 1 Y 1 B LYS 447 ? B LYS 211 38 1 Y 1 S G 12 ? C G 12 39 1 Y 1 S A 13 ? C A 13 40 1 Y 1 S A 14 ? C A 14 41 1 Y 1 S A 15 ? C A 15 42 1 Y 1 S A 24 ? C A 24 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 BMA C1 C N R 111 BMA C2 C N S 112 BMA C3 C N S 113 BMA C4 C N S 114 BMA C5 C N R 115 BMA C6 C N N 116 BMA O1 O N N 117 BMA O2 O N N 118 BMA O3 O N N 119 BMA O4 O N N 120 BMA O5 O N N 121 BMA O6 O N N 122 BMA H1 H N N 123 BMA H2 H N N 124 BMA H3 H N N 125 BMA H4 H N N 126 BMA H5 H N N 127 BMA H61 H N N 128 BMA H62 H N N 129 BMA HO1 H N N 130 BMA HO2 H N N 131 BMA HO3 H N N 132 BMA HO4 H N N 133 BMA HO6 H N N 134 CA CA CA N N 135 CFZ P P N N 136 CFZ N1 N N N 137 CFZ C2 C N N 138 CFZ O2 O N N 139 CFZ N3 N N N 140 CFZ C4 C N N 141 CFZ N4 N N N 142 CFZ C5 C N N 143 CFZ C6 C N N 144 CFZ "C1'" C N R 145 CFZ O1P O N N 146 CFZ "C2'" C N R 147 CFZ "F2'" F N N 148 CFZ O2P O N N 149 CFZ "C3'" C N R 150 CFZ "O3'" O N N 151 CFZ O3P O N N 152 CFZ "C4'" C N R 153 CFZ "O4'" O N N 154 CFZ "C5'" C N N 155 CFZ "O5'" O N N 156 CFZ HN4 H N N 157 CFZ HN4A H N N 158 CFZ H5 H N N 159 CFZ H6 H N N 160 CFZ "H1'" H N N 161 CFZ HO1P H N N 162 CFZ "H2'" H N N 163 CFZ "H3'" H N N 164 CFZ "HO3'" H N N 165 CFZ HO3P H N N 166 CFZ "H4'" H N N 167 CFZ "H5'" H N N 168 CFZ "H5'A" H N N 169 CYS N N N N 170 CYS CA C N R 171 CYS C C N N 172 CYS O O N N 173 CYS CB C N N 174 CYS SG S N N 175 CYS OXT O N N 176 CYS H H N N 177 CYS H2 H N N 178 CYS HA H N N 179 CYS HB2 H N N 180 CYS HB3 H N N 181 CYS HG H N N 182 CYS HXT H N N 183 FUL C1 C N S 184 FUL C2 C N S 185 FUL O2 O N N 186 FUL C3 C N R 187 FUL O3 O N N 188 FUL C4 C N S 189 FUL O4 O N N 190 FUL C5 C N S 191 FUL C6 C N N 192 FUL O5 O N N 193 FUL O1 O N N 194 FUL H1 H N N 195 FUL H2 H N N 196 FUL HO2 H N N 197 FUL H3 H N N 198 FUL HO3 H N N 199 FUL H4 H N N 200 FUL HO4 H N N 201 FUL H5 H N N 202 FUL H61 H N N 203 FUL H62 H N N 204 FUL H63 H N N 205 FUL HO1 H N N 206 G OP3 O N N 207 G P P N N 208 G OP1 O N N 209 G OP2 O N N 210 G "O5'" O N N 211 G "C5'" C N N 212 G "C4'" C N R 213 G "O4'" O N N 214 G "C3'" C N S 215 G "O3'" O N N 216 G "C2'" C N R 217 G "O2'" O N N 218 G "C1'" C N R 219 G N9 N Y N 220 G C8 C Y N 221 G N7 N Y N 222 G C5 C Y N 223 G C6 C N N 224 G O6 O N N 225 G N1 N N N 226 G C2 C N N 227 G N2 N N N 228 G N3 N N N 229 G C4 C Y N 230 G HOP3 H N N 231 G HOP2 H N N 232 G "H5'" H N N 233 G "H5''" H N N 234 G "H4'" H N N 235 G "H3'" H N N 236 G "HO3'" H N N 237 G "H2'" H N N 238 G "HO2'" H N N 239 G "H1'" H N N 240 G H8 H N N 241 G H1 H N N 242 G H21 H N N 243 G H22 H N N 244 GAL C1 C N R 245 GAL C2 C N R 246 GAL C3 C N S 247 GAL C4 C N R 248 GAL C5 C N R 249 GAL C6 C N N 250 GAL O1 O N N 251 GAL O2 O N N 252 GAL O3 O N N 253 GAL O4 O N N 254 GAL O5 O N N 255 GAL O6 O N N 256 GAL H1 H N N 257 GAL H2 H N N 258 GAL H3 H N N 259 GAL H4 H N N 260 GAL H5 H N N 261 GAL H61 H N N 262 GAL H62 H N N 263 GAL HO1 H N N 264 GAL HO2 H N N 265 GAL HO3 H N N 266 GAL HO4 H N N 267 GAL HO6 H N N 268 GLA C1 C N S 269 GLA C2 C N R 270 GLA C3 C N S 271 GLA C4 C N R 272 GLA C5 C N R 273 GLA C6 C N N 274 GLA O1 O N N 275 GLA O2 O N N 276 GLA O3 O N N 277 GLA O4 O N N 278 GLA O5 O N N 279 GLA O6 O N N 280 GLA H1 H N N 281 GLA H2 H N N 282 GLA H3 H N N 283 GLA H4 H N N 284 GLA H5 H N N 285 GLA H61 H N N 286 GLA H62 H N N 287 GLA HO1 H N N 288 GLA HO2 H N N 289 GLA HO3 H N N 290 GLA HO4 H N N 291 GLA HO6 H N N 292 GLN N N N N 293 GLN CA C N S 294 GLN C C N N 295 GLN O O N N 296 GLN CB C N N 297 GLN CG C N N 298 GLN CD C N N 299 GLN OE1 O N N 300 GLN NE2 N N N 301 GLN OXT O N N 302 GLN H H N N 303 GLN H2 H N N 304 GLN HA H N N 305 GLN HB2 H N N 306 GLN HB3 H N N 307 GLN HG2 H N N 308 GLN HG3 H N N 309 GLN HE21 H N N 310 GLN HE22 H N N 311 GLN HXT H N N 312 GLU N N N N 313 GLU CA C N S 314 GLU C C N N 315 GLU O O N N 316 GLU CB C N N 317 GLU CG C N N 318 GLU CD C N N 319 GLU OE1 O N N 320 GLU OE2 O N N 321 GLU OXT O N N 322 GLU H H N N 323 GLU H2 H N N 324 GLU HA H N N 325 GLU HB2 H N N 326 GLU HB3 H N N 327 GLU HG2 H N N 328 GLU HG3 H N N 329 GLU HE2 H N N 330 GLU HXT H N N 331 GLY N N N N 332 GLY CA C N N 333 GLY C C N N 334 GLY O O N N 335 GLY OXT O N N 336 GLY H H N N 337 GLY H2 H N N 338 GLY HA2 H N N 339 GLY HA3 H N N 340 GLY HXT H N N 341 HIS N N N N 342 HIS CA C N S 343 HIS C C N N 344 HIS O O N N 345 HIS CB C N N 346 HIS CG C Y N 347 HIS ND1 N Y N 348 HIS CD2 C Y N 349 HIS CE1 C Y N 350 HIS NE2 N Y N 351 HIS OXT O N N 352 HIS H H N N 353 HIS H2 H N N 354 HIS HA H N N 355 HIS HB2 H N N 356 HIS HB3 H N N 357 HIS HD1 H N N 358 HIS HD2 H N N 359 HIS HE1 H N N 360 HIS HE2 H N N 361 HIS HXT H N N 362 HOH O O N N 363 HOH H1 H N N 364 HOH H2 H N N 365 ILE N N N N 366 ILE CA C N S 367 ILE C C N N 368 ILE O O N N 369 ILE CB C N S 370 ILE CG1 C N N 371 ILE CG2 C N N 372 ILE CD1 C N N 373 ILE OXT O N N 374 ILE H H N N 375 ILE H2 H N N 376 ILE HA H N N 377 ILE HB H N N 378 ILE HG12 H N N 379 ILE HG13 H N N 380 ILE HG21 H N N 381 ILE HG22 H N N 382 ILE HG23 H N N 383 ILE HD11 H N N 384 ILE HD12 H N N 385 ILE HD13 H N N 386 ILE HXT H N N 387 LEU N N N N 388 LEU CA C N S 389 LEU C C N N 390 LEU O O N N 391 LEU CB C N N 392 LEU CG C N N 393 LEU CD1 C N N 394 LEU CD2 C N N 395 LEU OXT O N N 396 LEU H H N N 397 LEU H2 H N N 398 LEU HA H N N 399 LEU HB2 H N N 400 LEU HB3 H N N 401 LEU HG H N N 402 LEU HD11 H N N 403 LEU HD12 H N N 404 LEU HD13 H N N 405 LEU HD21 H N N 406 LEU HD22 H N N 407 LEU HD23 H N N 408 LEU HXT H N N 409 LYS N N N N 410 LYS CA C N S 411 LYS C C N N 412 LYS O O N N 413 LYS CB C N N 414 LYS CG C N N 415 LYS CD C N N 416 LYS CE C N N 417 LYS NZ N N N 418 LYS OXT O N N 419 LYS H H N N 420 LYS H2 H N N 421 LYS HA H N N 422 LYS HB2 H N N 423 LYS HB3 H N N 424 LYS HG2 H N N 425 LYS HG3 H N N 426 LYS HD2 H N N 427 LYS HD3 H N N 428 LYS HE2 H N N 429 LYS HE3 H N N 430 LYS HZ1 H N N 431 LYS HZ2 H N N 432 LYS HZ3 H N N 433 LYS HXT H N N 434 MAN C1 C N S 435 MAN C2 C N S 436 MAN C3 C N S 437 MAN C4 C N S 438 MAN C5 C N R 439 MAN C6 C N N 440 MAN O1 O N N 441 MAN O2 O N N 442 MAN O3 O N N 443 MAN O4 O N N 444 MAN O5 O N N 445 MAN O6 O N N 446 MAN H1 H N N 447 MAN H2 H N N 448 MAN H3 H N N 449 MAN H4 H N N 450 MAN H5 H N N 451 MAN H61 H N N 452 MAN H62 H N N 453 MAN HO1 H N N 454 MAN HO2 H N N 455 MAN HO3 H N N 456 MAN HO4 H N N 457 MAN HO6 H N N 458 MET N N N N 459 MET CA C N S 460 MET C C N N 461 MET O O N N 462 MET CB C N N 463 MET CG C N N 464 MET SD S N N 465 MET CE C N N 466 MET OXT O N N 467 MET H H N N 468 MET H2 H N N 469 MET HA H N N 470 MET HB2 H N N 471 MET HB3 H N N 472 MET HG2 H N N 473 MET HG3 H N N 474 MET HE1 H N N 475 MET HE2 H N N 476 MET HE3 H N N 477 MET HXT H N N 478 NAG C1 C N R 479 NAG C2 C N R 480 NAG C3 C N R 481 NAG C4 C N S 482 NAG C5 C N R 483 NAG C6 C N N 484 NAG C7 C N N 485 NAG C8 C N N 486 NAG N2 N N N 487 NAG O1 O N N 488 NAG O3 O N N 489 NAG O4 O N N 490 NAG O5 O N N 491 NAG O6 O N N 492 NAG O7 O N N 493 NAG H1 H N N 494 NAG H2 H N N 495 NAG H3 H N N 496 NAG H4 H N N 497 NAG H5 H N N 498 NAG H61 H N N 499 NAG H62 H N N 500 NAG H81 H N N 501 NAG H82 H N N 502 NAG H83 H N N 503 NAG HN2 H N N 504 NAG HO1 H N N 505 NAG HO3 H N N 506 NAG HO4 H N N 507 NAG HO6 H N N 508 NDG C1 C N S 509 NDG C2 C N R 510 NDG C3 C N R 511 NDG C4 C N S 512 NDG C5 C N R 513 NDG C6 C N N 514 NDG C7 C N N 515 NDG C8 C N N 516 NDG O5 O N N 517 NDG O3 O N N 518 NDG O4 O N N 519 NDG O6 O N N 520 NDG O7 O N N 521 NDG N2 N N N 522 NDG O1 O N N 523 NDG H1 H N N 524 NDG H2 H N N 525 NDG H3 H N N 526 NDG H4 H N N 527 NDG H5 H N N 528 NDG H61 H N N 529 NDG H62 H N N 530 NDG H81 H N N 531 NDG H82 H N N 532 NDG H83 H N N 533 NDG HO3 H N N 534 NDG HO4 H N N 535 NDG HO6 H N N 536 NDG HN2 H N N 537 NDG HO1 H N N 538 PHE N N N N 539 PHE CA C N S 540 PHE C C N N 541 PHE O O N N 542 PHE CB C N N 543 PHE CG C Y N 544 PHE CD1 C Y N 545 PHE CD2 C Y N 546 PHE CE1 C Y N 547 PHE CE2 C Y N 548 PHE CZ C Y N 549 PHE OXT O N N 550 PHE H H N N 551 PHE H2 H N N 552 PHE HA H N N 553 PHE HB2 H N N 554 PHE HB3 H N N 555 PHE HD1 H N N 556 PHE HD2 H N N 557 PHE HE1 H N N 558 PHE HE2 H N N 559 PHE HZ H N N 560 PHE HXT H N N 561 PRO N N N N 562 PRO CA C N S 563 PRO C C N N 564 PRO O O N N 565 PRO CB C N N 566 PRO CG C N N 567 PRO CD C N N 568 PRO OXT O N N 569 PRO H H N N 570 PRO HA H N N 571 PRO HB2 H N N 572 PRO HB3 H N N 573 PRO HG2 H N N 574 PRO HG3 H N N 575 PRO HD2 H N N 576 PRO HD3 H N N 577 PRO HXT H N N 578 SER N N N N 579 SER CA C N S 580 SER C C N N 581 SER O O N N 582 SER CB C N N 583 SER OG O N N 584 SER OXT O N N 585 SER H H N N 586 SER H2 H N N 587 SER HA H N N 588 SER HB2 H N N 589 SER HB3 H N N 590 SER HG H N N 591 SER HXT H N N 592 THR N N N N 593 THR CA C N S 594 THR C C N N 595 THR O O N N 596 THR CB C N R 597 THR OG1 O N N 598 THR CG2 C N N 599 THR OXT O N N 600 THR H H N N 601 THR H2 H N N 602 THR HA H N N 603 THR HB H N N 604 THR HG1 H N N 605 THR HG21 H N N 606 THR HG22 H N N 607 THR HG23 H N N 608 THR HXT H N N 609 TRP N N N N 610 TRP CA C N S 611 TRP C C N N 612 TRP O O N N 613 TRP CB C N N 614 TRP CG C Y N 615 TRP CD1 C Y N 616 TRP CD2 C Y N 617 TRP NE1 N Y N 618 TRP CE2 C Y N 619 TRP CE3 C Y N 620 TRP CZ2 C Y N 621 TRP CZ3 C Y N 622 TRP CH2 C Y N 623 TRP OXT O N N 624 TRP H H N N 625 TRP H2 H N N 626 TRP HA H N N 627 TRP HB2 H N N 628 TRP HB3 H N N 629 TRP HD1 H N N 630 TRP HE1 H N N 631 TRP HE3 H N N 632 TRP HZ2 H N N 633 TRP HZ3 H N N 634 TRP HH2 H N N 635 TRP HXT H N N 636 TYR N N N N 637 TYR CA C N S 638 TYR C C N N 639 TYR O O N N 640 TYR CB C N N 641 TYR CG C Y N 642 TYR CD1 C Y N 643 TYR CD2 C Y N 644 TYR CE1 C Y N 645 TYR CE2 C Y N 646 TYR CZ C Y N 647 TYR OH O N N 648 TYR OXT O N N 649 TYR H H N N 650 TYR H2 H N N 651 TYR HA H N N 652 TYR HB2 H N N 653 TYR HB3 H N N 654 TYR HD1 H N N 655 TYR HD2 H N N 656 TYR HE1 H N N 657 TYR HE2 H N N 658 TYR HH H N N 659 TYR HXT H N N 660 UFT OP3 O N N 661 UFT P P N N 662 UFT OP1 O N N 663 UFT OP2 O N N 664 UFT "O5'" O N N 665 UFT N1 N N N 666 UFT C6 C N N 667 UFT C2 C N N 668 UFT O2 O N N 669 UFT N3 N N N 670 UFT C4 C N N 671 UFT O4 O N N 672 UFT C5 C N N 673 UFT "F2'" F N N 674 UFT "C2'" C N R 675 UFT "C5'" C N N 676 UFT "C4'" C N R 677 UFT "O4'" O N N 678 UFT "C1'" C N R 679 UFT "C3'" C N R 680 UFT "O3'" O N N 681 UFT HOP3 H N N 682 UFT HOP2 H N N 683 UFT H6 H N N 684 UFT H5 H N N 685 UFT "H2'" H N N 686 UFT "H5'" H N N 687 UFT "H5'A" H N N 688 UFT "H4'" H N N 689 UFT "H1'" H N N 690 UFT "H3'" H N N 691 UFT "HO3'" H N N 692 UFT HN3 H N N 693 VAL N N N N 694 VAL CA C N S 695 VAL C C N N 696 VAL O O N N 697 VAL CB C N N 698 VAL CG1 C N N 699 VAL CG2 C N N 700 VAL OXT O N N 701 VAL H H N N 702 VAL H2 H N N 703 VAL HA H N N 704 VAL HB H N N 705 VAL HG11 H N N 706 VAL HG12 H N N 707 VAL HG13 H N N 708 VAL HG21 H N N 709 VAL HG22 H N N 710 VAL HG23 H N N 711 VAL HXT H N N 712 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 BMA C1 C2 sing N N 109 BMA C1 O1 sing N N 110 BMA C1 O5 sing N N 111 BMA C1 H1 sing N N 112 BMA C2 C3 sing N N 113 BMA C2 O2 sing N N 114 BMA C2 H2 sing N N 115 BMA C3 C4 sing N N 116 BMA C3 O3 sing N N 117 BMA C3 H3 sing N N 118 BMA C4 C5 sing N N 119 BMA C4 O4 sing N N 120 BMA C4 H4 sing N N 121 BMA C5 C6 sing N N 122 BMA C5 O5 sing N N 123 BMA C5 H5 sing N N 124 BMA C6 O6 sing N N 125 BMA C6 H61 sing N N 126 BMA C6 H62 sing N N 127 BMA O1 HO1 sing N N 128 BMA O2 HO2 sing N N 129 BMA O3 HO3 sing N N 130 BMA O4 HO4 sing N N 131 BMA O6 HO6 sing N N 132 CFZ O2P P doub N N 133 CFZ P "O5'" sing N N 134 CFZ P O1P sing N N 135 CFZ P O3P sing N N 136 CFZ C6 N1 sing N N 137 CFZ C2 N1 sing N N 138 CFZ N1 "C1'" sing N N 139 CFZ N3 C2 sing N N 140 CFZ C2 O2 doub N N 141 CFZ C4 N3 doub N N 142 CFZ N4 C4 sing N N 143 CFZ C4 C5 sing N N 144 CFZ N4 HN4 sing N N 145 CFZ N4 HN4A sing N N 146 CFZ C5 C6 doub N N 147 CFZ C5 H5 sing N N 148 CFZ C6 H6 sing N N 149 CFZ "C2'" "C1'" sing N N 150 CFZ "C1'" "O4'" sing N N 151 CFZ "C1'" "H1'" sing N N 152 CFZ O1P HO1P sing N N 153 CFZ "C3'" "C2'" sing N N 154 CFZ "C2'" "F2'" sing N N 155 CFZ "C2'" "H2'" sing N N 156 CFZ "C3'" "O3'" sing N N 157 CFZ "C3'" "C4'" sing N N 158 CFZ "C3'" "H3'" sing N N 159 CFZ "O3'" "HO3'" sing N N 160 CFZ O3P HO3P sing N N 161 CFZ "O4'" "C4'" sing N N 162 CFZ "C5'" "C4'" sing N N 163 CFZ "C4'" "H4'" sing N N 164 CFZ "O5'" "C5'" sing N N 165 CFZ "C5'" "H5'" sing N N 166 CFZ "C5'" "H5'A" sing N N 167 CYS N CA sing N N 168 CYS N H sing N N 169 CYS N H2 sing N N 170 CYS CA C sing N N 171 CYS CA CB sing N N 172 CYS CA HA sing N N 173 CYS C O doub N N 174 CYS C OXT sing N N 175 CYS CB SG sing N N 176 CYS CB HB2 sing N N 177 CYS CB HB3 sing N N 178 CYS SG HG sing N N 179 CYS OXT HXT sing N N 180 FUL C1 C2 sing N N 181 FUL C1 O5 sing N N 182 FUL C1 O1 sing N N 183 FUL C1 H1 sing N N 184 FUL C2 O2 sing N N 185 FUL C2 C3 sing N N 186 FUL C2 H2 sing N N 187 FUL O2 HO2 sing N N 188 FUL C3 O3 sing N N 189 FUL C3 C4 sing N N 190 FUL C3 H3 sing N N 191 FUL O3 HO3 sing N N 192 FUL C4 O4 sing N N 193 FUL C4 C5 sing N N 194 FUL C4 H4 sing N N 195 FUL O4 HO4 sing N N 196 FUL C5 C6 sing N N 197 FUL C5 O5 sing N N 198 FUL C5 H5 sing N N 199 FUL C6 H61 sing N N 200 FUL C6 H62 sing N N 201 FUL C6 H63 sing N N 202 FUL O1 HO1 sing N N 203 G OP3 P sing N N 204 G OP3 HOP3 sing N N 205 G P OP1 doub N N 206 G P OP2 sing N N 207 G P "O5'" sing N N 208 G OP2 HOP2 sing N N 209 G "O5'" "C5'" sing N N 210 G "C5'" "C4'" sing N N 211 G "C5'" "H5'" sing N N 212 G "C5'" "H5''" sing N N 213 G "C4'" "O4'" sing N N 214 G "C4'" "C3'" sing N N 215 G "C4'" "H4'" sing N N 216 G "O4'" "C1'" sing N N 217 G "C3'" "O3'" sing N N 218 G "C3'" "C2'" sing N N 219 G "C3'" "H3'" sing N N 220 G "O3'" "HO3'" sing N N 221 G "C2'" "O2'" sing N N 222 G "C2'" "C1'" sing N N 223 G "C2'" "H2'" sing N N 224 G "O2'" "HO2'" sing N N 225 G "C1'" N9 sing N N 226 G "C1'" "H1'" sing N N 227 G N9 C8 sing Y N 228 G N9 C4 sing Y N 229 G C8 N7 doub Y N 230 G C8 H8 sing N N 231 G N7 C5 sing Y N 232 G C5 C6 sing N N 233 G C5 C4 doub Y N 234 G C6 O6 doub N N 235 G C6 N1 sing N N 236 G N1 C2 sing N N 237 G N1 H1 sing N N 238 G C2 N2 sing N N 239 G C2 N3 doub N N 240 G N2 H21 sing N N 241 G N2 H22 sing N N 242 G N3 C4 sing N N 243 GAL C1 C2 sing N N 244 GAL C1 O1 sing N N 245 GAL C1 O5 sing N N 246 GAL C1 H1 sing N N 247 GAL C2 C3 sing N N 248 GAL C2 O2 sing N N 249 GAL C2 H2 sing N N 250 GAL C3 C4 sing N N 251 GAL C3 O3 sing N N 252 GAL C3 H3 sing N N 253 GAL C4 C5 sing N N 254 GAL C4 O4 sing N N 255 GAL C4 H4 sing N N 256 GAL C5 C6 sing N N 257 GAL C5 O5 sing N N 258 GAL C5 H5 sing N N 259 GAL C6 O6 sing N N 260 GAL C6 H61 sing N N 261 GAL C6 H62 sing N N 262 GAL O1 HO1 sing N N 263 GAL O2 HO2 sing N N 264 GAL O3 HO3 sing N N 265 GAL O4 HO4 sing N N 266 GAL O6 HO6 sing N N 267 GLA C1 C2 sing N N 268 GLA C1 O1 sing N N 269 GLA C1 O5 sing N N 270 GLA C1 H1 sing N N 271 GLA C2 C3 sing N N 272 GLA C2 O2 sing N N 273 GLA C2 H2 sing N N 274 GLA C3 C4 sing N N 275 GLA C3 O3 sing N N 276 GLA C3 H3 sing N N 277 GLA C4 C5 sing N N 278 GLA C4 O4 sing N N 279 GLA C4 H4 sing N N 280 GLA C5 C6 sing N N 281 GLA C5 O5 sing N N 282 GLA C5 H5 sing N N 283 GLA C6 O6 sing N N 284 GLA C6 H61 sing N N 285 GLA C6 H62 sing N N 286 GLA O1 HO1 sing N N 287 GLA O2 HO2 sing N N 288 GLA O3 HO3 sing N N 289 GLA O4 HO4 sing N N 290 GLA O6 HO6 sing N N 291 GLN N CA sing N N 292 GLN N H sing N N 293 GLN N H2 sing N N 294 GLN CA C sing N N 295 GLN CA CB sing N N 296 GLN CA HA sing N N 297 GLN C O doub N N 298 GLN C OXT sing N N 299 GLN CB CG sing N N 300 GLN CB HB2 sing N N 301 GLN CB HB3 sing N N 302 GLN CG CD sing N N 303 GLN CG HG2 sing N N 304 GLN CG HG3 sing N N 305 GLN CD OE1 doub N N 306 GLN CD NE2 sing N N 307 GLN NE2 HE21 sing N N 308 GLN NE2 HE22 sing N N 309 GLN OXT HXT sing N N 310 GLU N CA sing N N 311 GLU N H sing N N 312 GLU N H2 sing N N 313 GLU CA C sing N N 314 GLU CA CB sing N N 315 GLU CA HA sing N N 316 GLU C O doub N N 317 GLU C OXT sing N N 318 GLU CB CG sing N N 319 GLU CB HB2 sing N N 320 GLU CB HB3 sing N N 321 GLU CG CD sing N N 322 GLU CG HG2 sing N N 323 GLU CG HG3 sing N N 324 GLU CD OE1 doub N N 325 GLU CD OE2 sing N N 326 GLU OE2 HE2 sing N N 327 GLU OXT HXT sing N N 328 GLY N CA sing N N 329 GLY N H sing N N 330 GLY N H2 sing N N 331 GLY CA C sing N N 332 GLY CA HA2 sing N N 333 GLY CA HA3 sing N N 334 GLY C O doub N N 335 GLY C OXT sing N N 336 GLY OXT HXT sing N N 337 HIS N CA sing N N 338 HIS N H sing N N 339 HIS N H2 sing N N 340 HIS CA C sing N N 341 HIS CA CB sing N N 342 HIS CA HA sing N N 343 HIS C O doub N N 344 HIS C OXT sing N N 345 HIS CB CG sing N N 346 HIS CB HB2 sing N N 347 HIS CB HB3 sing N N 348 HIS CG ND1 sing Y N 349 HIS CG CD2 doub Y N 350 HIS ND1 CE1 doub Y N 351 HIS ND1 HD1 sing N N 352 HIS CD2 NE2 sing Y N 353 HIS CD2 HD2 sing N N 354 HIS CE1 NE2 sing Y N 355 HIS CE1 HE1 sing N N 356 HIS NE2 HE2 sing N N 357 HIS OXT HXT sing N N 358 HOH O H1 sing N N 359 HOH O H2 sing N N 360 ILE N CA sing N N 361 ILE N H sing N N 362 ILE N H2 sing N N 363 ILE CA C sing N N 364 ILE CA CB sing N N 365 ILE CA HA sing N N 366 ILE C O doub N N 367 ILE C OXT sing N N 368 ILE CB CG1 sing N N 369 ILE CB CG2 sing N N 370 ILE CB HB sing N N 371 ILE CG1 CD1 sing N N 372 ILE CG1 HG12 sing N N 373 ILE CG1 HG13 sing N N 374 ILE CG2 HG21 sing N N 375 ILE CG2 HG22 sing N N 376 ILE CG2 HG23 sing N N 377 ILE CD1 HD11 sing N N 378 ILE CD1 HD12 sing N N 379 ILE CD1 HD13 sing N N 380 ILE OXT HXT sing N N 381 LEU N CA sing N N 382 LEU N H sing N N 383 LEU N H2 sing N N 384 LEU CA C sing N N 385 LEU CA CB sing N N 386 LEU CA HA sing N N 387 LEU C O doub N N 388 LEU C OXT sing N N 389 LEU CB CG sing N N 390 LEU CB HB2 sing N N 391 LEU CB HB3 sing N N 392 LEU CG CD1 sing N N 393 LEU CG CD2 sing N N 394 LEU CG HG sing N N 395 LEU CD1 HD11 sing N N 396 LEU CD1 HD12 sing N N 397 LEU CD1 HD13 sing N N 398 LEU CD2 HD21 sing N N 399 LEU CD2 HD22 sing N N 400 LEU CD2 HD23 sing N N 401 LEU OXT HXT sing N N 402 LYS N CA sing N N 403 LYS N H sing N N 404 LYS N H2 sing N N 405 LYS CA C sing N N 406 LYS CA CB sing N N 407 LYS CA HA sing N N 408 LYS C O doub N N 409 LYS C OXT sing N N 410 LYS CB CG sing N N 411 LYS CB HB2 sing N N 412 LYS CB HB3 sing N N 413 LYS CG CD sing N N 414 LYS CG HG2 sing N N 415 LYS CG HG3 sing N N 416 LYS CD CE sing N N 417 LYS CD HD2 sing N N 418 LYS CD HD3 sing N N 419 LYS CE NZ sing N N 420 LYS CE HE2 sing N N 421 LYS CE HE3 sing N N 422 LYS NZ HZ1 sing N N 423 LYS NZ HZ2 sing N N 424 LYS NZ HZ3 sing N N 425 LYS OXT HXT sing N N 426 MAN C1 C2 sing N N 427 MAN C1 O1 sing N N 428 MAN C1 O5 sing N N 429 MAN C1 H1 sing N N 430 MAN C2 C3 sing N N 431 MAN C2 O2 sing N N 432 MAN C2 H2 sing N N 433 MAN C3 C4 sing N N 434 MAN C3 O3 sing N N 435 MAN C3 H3 sing N N 436 MAN C4 C5 sing N N 437 MAN C4 O4 sing N N 438 MAN C4 H4 sing N N 439 MAN C5 C6 sing N N 440 MAN C5 O5 sing N N 441 MAN C5 H5 sing N N 442 MAN C6 O6 sing N N 443 MAN C6 H61 sing N N 444 MAN C6 H62 sing N N 445 MAN O1 HO1 sing N N 446 MAN O2 HO2 sing N N 447 MAN O3 HO3 sing N N 448 MAN O4 HO4 sing N N 449 MAN O6 HO6 sing N N 450 MET N CA sing N N 451 MET N H sing N N 452 MET N H2 sing N N 453 MET CA C sing N N 454 MET CA CB sing N N 455 MET CA HA sing N N 456 MET C O doub N N 457 MET C OXT sing N N 458 MET CB CG sing N N 459 MET CB HB2 sing N N 460 MET CB HB3 sing N N 461 MET CG SD sing N N 462 MET CG HG2 sing N N 463 MET CG HG3 sing N N 464 MET SD CE sing N N 465 MET CE HE1 sing N N 466 MET CE HE2 sing N N 467 MET CE HE3 sing N N 468 MET OXT HXT sing N N 469 NAG C1 C2 sing N N 470 NAG C1 O1 sing N N 471 NAG C1 O5 sing N N 472 NAG C1 H1 sing N N 473 NAG C2 C3 sing N N 474 NAG C2 N2 sing N N 475 NAG C2 H2 sing N N 476 NAG C3 C4 sing N N 477 NAG C3 O3 sing N N 478 NAG C3 H3 sing N N 479 NAG C4 C5 sing N N 480 NAG C4 O4 sing N N 481 NAG C4 H4 sing N N 482 NAG C5 C6 sing N N 483 NAG C5 O5 sing N N 484 NAG C5 H5 sing N N 485 NAG C6 O6 sing N N 486 NAG C6 H61 sing N N 487 NAG C6 H62 sing N N 488 NAG C7 C8 sing N N 489 NAG C7 N2 sing N N 490 NAG C7 O7 doub N N 491 NAG C8 H81 sing N N 492 NAG C8 H82 sing N N 493 NAG C8 H83 sing N N 494 NAG N2 HN2 sing N N 495 NAG O1 HO1 sing N N 496 NAG O3 HO3 sing N N 497 NAG O4 HO4 sing N N 498 NAG O6 HO6 sing N N 499 NDG C1 C2 sing N N 500 NDG C1 O5 sing N N 501 NDG C1 O1 sing N N 502 NDG C1 H1 sing N N 503 NDG C2 C3 sing N N 504 NDG C2 N2 sing N N 505 NDG C2 H2 sing N N 506 NDG C3 C4 sing N N 507 NDG C3 O3 sing N N 508 NDG C3 H3 sing N N 509 NDG C4 C5 sing N N 510 NDG C4 O4 sing N N 511 NDG C4 H4 sing N N 512 NDG C5 C6 sing N N 513 NDG C5 O5 sing N N 514 NDG C5 H5 sing N N 515 NDG C6 O6 sing N N 516 NDG C6 H61 sing N N 517 NDG C6 H62 sing N N 518 NDG C7 C8 sing N N 519 NDG C7 O7 doub N N 520 NDG C7 N2 sing N N 521 NDG C8 H81 sing N N 522 NDG C8 H82 sing N N 523 NDG C8 H83 sing N N 524 NDG O3 HO3 sing N N 525 NDG O4 HO4 sing N N 526 NDG O6 HO6 sing N N 527 NDG N2 HN2 sing N N 528 NDG O1 HO1 sing N N 529 PHE N CA sing N N 530 PHE N H sing N N 531 PHE N H2 sing N N 532 PHE CA C sing N N 533 PHE CA CB sing N N 534 PHE CA HA sing N N 535 PHE C O doub N N 536 PHE C OXT sing N N 537 PHE CB CG sing N N 538 PHE CB HB2 sing N N 539 PHE CB HB3 sing N N 540 PHE CG CD1 doub Y N 541 PHE CG CD2 sing Y N 542 PHE CD1 CE1 sing Y N 543 PHE CD1 HD1 sing N N 544 PHE CD2 CE2 doub Y N 545 PHE CD2 HD2 sing N N 546 PHE CE1 CZ doub Y N 547 PHE CE1 HE1 sing N N 548 PHE CE2 CZ sing Y N 549 PHE CE2 HE2 sing N N 550 PHE CZ HZ sing N N 551 PHE OXT HXT sing N N 552 PRO N CA sing N N 553 PRO N CD sing N N 554 PRO N H sing N N 555 PRO CA C sing N N 556 PRO CA CB sing N N 557 PRO CA HA sing N N 558 PRO C O doub N N 559 PRO C OXT sing N N 560 PRO CB CG sing N N 561 PRO CB HB2 sing N N 562 PRO CB HB3 sing N N 563 PRO CG CD sing N N 564 PRO CG HG2 sing N N 565 PRO CG HG3 sing N N 566 PRO CD HD2 sing N N 567 PRO CD HD3 sing N N 568 PRO OXT HXT sing N N 569 SER N CA sing N N 570 SER N H sing N N 571 SER N H2 sing N N 572 SER CA C sing N N 573 SER CA CB sing N N 574 SER CA HA sing N N 575 SER C O doub N N 576 SER C OXT sing N N 577 SER CB OG sing N N 578 SER CB HB2 sing N N 579 SER CB HB3 sing N N 580 SER OG HG sing N N 581 SER OXT HXT sing N N 582 THR N CA sing N N 583 THR N H sing N N 584 THR N H2 sing N N 585 THR CA C sing N N 586 THR CA CB sing N N 587 THR CA HA sing N N 588 THR C O doub N N 589 THR C OXT sing N N 590 THR CB OG1 sing N N 591 THR CB CG2 sing N N 592 THR CB HB sing N N 593 THR OG1 HG1 sing N N 594 THR CG2 HG21 sing N N 595 THR CG2 HG22 sing N N 596 THR CG2 HG23 sing N N 597 THR OXT HXT sing N N 598 TRP N CA sing N N 599 TRP N H sing N N 600 TRP N H2 sing N N 601 TRP CA C sing N N 602 TRP CA CB sing N N 603 TRP CA HA sing N N 604 TRP C O doub N N 605 TRP C OXT sing N N 606 TRP CB CG sing N N 607 TRP CB HB2 sing N N 608 TRP CB HB3 sing N N 609 TRP CG CD1 doub Y N 610 TRP CG CD2 sing Y N 611 TRP CD1 NE1 sing Y N 612 TRP CD1 HD1 sing N N 613 TRP CD2 CE2 doub Y N 614 TRP CD2 CE3 sing Y N 615 TRP NE1 CE2 sing Y N 616 TRP NE1 HE1 sing N N 617 TRP CE2 CZ2 sing Y N 618 TRP CE3 CZ3 doub Y N 619 TRP CE3 HE3 sing N N 620 TRP CZ2 CH2 doub Y N 621 TRP CZ2 HZ2 sing N N 622 TRP CZ3 CH2 sing Y N 623 TRP CZ3 HZ3 sing N N 624 TRP CH2 HH2 sing N N 625 TRP OXT HXT sing N N 626 TYR N CA sing N N 627 TYR N H sing N N 628 TYR N H2 sing N N 629 TYR CA C sing N N 630 TYR CA CB sing N N 631 TYR CA HA sing N N 632 TYR C O doub N N 633 TYR C OXT sing N N 634 TYR CB CG sing N N 635 TYR CB HB2 sing N N 636 TYR CB HB3 sing N N 637 TYR CG CD1 doub Y N 638 TYR CG CD2 sing Y N 639 TYR CD1 CE1 sing Y N 640 TYR CD1 HD1 sing N N 641 TYR CD2 CE2 doub Y N 642 TYR CD2 HD2 sing N N 643 TYR CE1 CZ doub Y N 644 TYR CE1 HE1 sing N N 645 TYR CE2 CZ sing Y N 646 TYR CE2 HE2 sing N N 647 TYR CZ OH sing N N 648 TYR OH HH sing N N 649 TYR OXT HXT sing N N 650 UFT OP3 P sing N N 651 UFT OP1 P doub N N 652 UFT P OP2 sing N N 653 UFT P "O5'" sing N N 654 UFT OP3 HOP3 sing N N 655 UFT OP2 HOP2 sing N N 656 UFT "O5'" "C5'" sing N N 657 UFT C6 N1 sing N N 658 UFT N1 C2 sing N N 659 UFT N1 "C1'" sing N N 660 UFT C5 C6 doub N N 661 UFT C6 H6 sing N N 662 UFT N3 C2 sing N N 663 UFT C2 O2 doub N N 664 UFT C4 N3 sing N N 665 UFT O4 C4 doub N N 666 UFT C5 C4 sing N N 667 UFT C5 H5 sing N N 668 UFT "C2'" "F2'" sing N N 669 UFT "C3'" "C2'" sing N N 670 UFT "C2'" "C1'" sing N N 671 UFT "C2'" "H2'" sing N N 672 UFT "C5'" "C4'" sing N N 673 UFT "C5'" "H5'" sing N N 674 UFT "C5'" "H5'A" sing N N 675 UFT "C3'" "C4'" sing N N 676 UFT "C4'" "O4'" sing N N 677 UFT "C4'" "H4'" sing N N 678 UFT "O4'" "C1'" sing N N 679 UFT "C1'" "H1'" sing N N 680 UFT "C3'" "O3'" sing N N 681 UFT "C3'" "H3'" sing N N 682 UFT "O3'" "HO3'" sing N N 683 UFT N3 HN3 sing N N 684 VAL N CA sing N N 685 VAL N H sing N N 686 VAL N H2 sing N N 687 VAL CA C sing N N 688 VAL CA CB sing N N 689 VAL CA HA sing N N 690 VAL C O doub N N 691 VAL C OXT sing N N 692 VAL CB CG1 sing N N 693 VAL CB CG2 sing N N 694 VAL CB HB sing N N 695 VAL CG1 HG11 sing N N 696 VAL CG1 HG12 sing N N 697 VAL CG1 HG13 sing N N 698 VAL CG2 HG21 sing N N 699 VAL CG2 HG22 sing N N 700 VAL CG2 HG23 sing N N 701 VAL OXT HXT sing N N 702 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3AGV 'double helix' 3AGV 'hairpin loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C A 3 1_555 C UFT 21 1_555 0.596 0.526 -0.029 23.704 0.744 14.892 1 S_A3:UFT21_S S 3 ? S 21 ? ? ? 1 C G 5 1_555 C A 19 1_555 6.470 -4.052 0.362 -19.545 3.889 -6.145 2 S_G5:A19_S S 5 ? S 19 ? 11 10 1 C UFT 9 1_555 C A 18 1_555 -0.079 -0.315 -0.137 19.101 -11.979 -2.171 3 S_UFT9:A18_S S 9 ? S 18 ? 20 1 1 D A 3 1_555 D UFT 21 1_555 -0.275 -0.027 0.010 -1.477 5.709 0.703 4 U_A3:UFT21_U U 3 ? U 21 ? 20 1 1 D G 5 1_555 D A 19 1_555 6.853 -4.133 -0.261 -18.468 -14.571 -0.717 5 U_G5:A19_U U 5 ? U 19 ? 11 10 1 D UFT 9 1_555 D A 18 1_555 -0.413 0.041 -0.022 15.578 -18.682 2.449 6 U_UFT9:A18_U U 9 ? U 18 ? 20 1 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 MAN 1 n 3 MAN 2 n 3 NDG 3 n 3 GLA 4 n 4 NDG 1 n 4 NAG 2 n 4 BMA 3 n 4 MAN 4 n 4 NAG 5 n 4 GAL 6 n 4 MAN 7 n 4 FUL 8 n # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1FC1 _pdbx_initial_refinement_model.details 'PDB ENTRY 1FC1' # _atom_sites.entry_id 3AGV _atom_sites.fract_transf_matrix[1][1] 0.011964 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009325 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012585 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA F N O P S # loop_