HEADER HYDROLASE 18-MAY-10 3AIS TITLE CRYSTAL STRUCTURE OF A MUTANT BETA-GLUCOSIDASE IN WHEAT COMPLEXED WITH TITLE 2 DIMBOA-GLC COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-GLUCOSIDASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES IN UNP 50-569; COMPND 5 EC: 3.2.1.21; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRITICUM AESTIVUM; SOURCE 3 ORGANISM_COMMON: WHEAT; SOURCE 4 ORGANISM_TAXID: 4565; SOURCE 5 GENE: TAGLU1B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 CODONPLUS(DE3) RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET30A KEYWDS TIM BARREL, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.SUE,C.NAKAMURA,T.MIYAMOTO,S.YAJIMA REVDAT 5 23-OCT-24 3AIS 1 REMARK REVDAT 4 01-NOV-23 3AIS 1 HETSYN REVDAT 3 29-JUL-20 3AIS 1 COMPND REMARK SEQADV HETNAM REVDAT 3 2 1 LINK SITE REVDAT 2 04-APR-12 3AIS 1 JRNL VERSN REVDAT 1 16-MAR-11 3AIS 0 JRNL AUTH M.SUE,C.NAKAMURA,T.MIYAMOTO,S.YAJIMA JRNL TITL ACTIVE-SITE ARCHITECTURE OF BENZOXAZINONE-GLUCOSIDE JRNL TITL 2 BETA-D-GLUCOSIDASES IN TRITICEAE JRNL REF PLANT SCI. V. 180 268 2011 JRNL REFN ISSN 0168-9452 JRNL PMID 21421370 JRNL DOI 10.1016/J.PLANTSCI.2010.09.001 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 3 NUMBER OF REFLECTIONS : 58247 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3107 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4183 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.2910 REMARK 3 BIN FREE R VALUE SET COUNT : 258 REMARK 3 BIN FREE R VALUE : 0.3270 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3965 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 303 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.142 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4116 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5583 ; 1.363 ; 1.945 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 490 ; 1.461 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 207 ;35.527 ;24.106 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 656 ;13.088 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;21.199 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 560 ; 0.104 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3232 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2158 ; 0.236 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2827 ; 0.332 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 302 ; 0.127 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 28 ; 0.135 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 13 ; 0.132 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2441 ; 1.542 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3931 ; 2.350 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1675 ; 2.066 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1652 ; 2.991 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3AIS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-JUN-10. REMARK 100 THE DEPOSITION ID IS D_1000029304. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-FEB-07 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-6A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97800 REMARK 200 MONOCHROMATOR : TRIANGULAR SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63693 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 16.20 REMARK 200 R MERGE (I) : 0.11400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 35.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.20 REMARK 200 R MERGE FOR SHELL (I) : 0.98300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2DGA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10MM HEPES, 1M LISO4, 150MM NACL, PH REMARK 280 7.2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+3/4,X+1/4,-Z+1/4 REMARK 290 14555 -Y+3/4,-X+3/4,-Z+3/4 REMARK 290 15555 Y+1/4,-X+1/4,Z+3/4 REMARK 290 16555 -Y+1/4,X+3/4,Z+1/4 REMARK 290 17555 X+3/4,Z+1/4,-Y+1/4 REMARK 290 18555 -X+1/4,Z+3/4,Y+1/4 REMARK 290 19555 -X+3/4,-Z+3/4,-Y+3/4 REMARK 290 20555 X+1/4,-Z+1/4,Y+3/4 REMARK 290 21555 Z+3/4,Y+1/4,-X+1/4 REMARK 290 22555 Z+1/4,-Y+1/4,X+3/4 REMARK 290 23555 -Z+1/4,Y+3/4,X+1/4 REMARK 290 24555 -Z+3/4,-Y+3/4,-X+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 97.02650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 97.02650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 97.02650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 97.02650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 97.02650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 97.02650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 97.02650 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 97.02650 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 97.02650 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 97.02650 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 97.02650 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 97.02650 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 97.02650 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 97.02650 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 97.02650 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 97.02650 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 97.02650 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 97.02650 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 145.53975 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 48.51325 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 48.51325 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 145.53975 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 145.53975 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 145.53975 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 48.51325 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 48.51325 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 145.53975 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 48.51325 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 145.53975 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 48.51325 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 145.53975 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 48.51325 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 48.51325 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 48.51325 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 145.53975 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 48.51325 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 145.53975 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 145.53975 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 145.53975 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 48.51325 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 48.51325 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 145.53975 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 145.53975 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 48.51325 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 48.51325 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 48.51325 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 48.51325 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 145.53975 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 48.51325 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 145.53975 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 48.51325 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 145.53975 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 145.53975 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 145.53975 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 97880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -68.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 -1.000000 0.000000 -48.51325 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 -48.51325 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -48.51325 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 -48.51325 REMARK 350 BIOMT2 5 0.000000 0.000000 -1.000000 -48.51325 REMARK 350 BIOMT3 5 0.000000 -1.000000 0.000000 -48.51325 REMARK 350 BIOMT1 6 0.000000 0.000000 -1.000000 -48.51325 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 -48.51325 REMARK 350 BIOMT3 6 -1.000000 0.000000 0.000000 -48.51325 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 701 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -44 REMARK 465 HIS A -43 REMARK 465 HIS A -42 REMARK 465 HIS A -41 REMARK 465 HIS A -40 REMARK 465 HIS A -39 REMARK 465 HIS A -38 REMARK 465 SER A -37 REMARK 465 SER A -36 REMARK 465 GLY A -35 REMARK 465 LEU A -34 REMARK 465 VAL A -33 REMARK 465 PRO A -32 REMARK 465 ARG A -31 REMARK 465 GLY A -30 REMARK 465 SER A -29 REMARK 465 GLY A -28 REMARK 465 MET A -27 REMARK 465 LYS A -26 REMARK 465 GLU A -25 REMARK 465 THR A -24 REMARK 465 ALA A -23 REMARK 465 ALA A -22 REMARK 465 ALA A -21 REMARK 465 LYS A -20 REMARK 465 PHE A -19 REMARK 465 GLU A -18 REMARK 465 ARG A -17 REMARK 465 GLN A -16 REMARK 465 HIS A -15 REMARK 465 MET A -14 REMARK 465 ASP A -13 REMARK 465 SER A -12 REMARK 465 PRO A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 ASP A -6 REMARK 465 ASP A -5 REMARK 465 ASP A -4 REMARK 465 ASP A -3 REMARK 465 LYS A -2 REMARK 465 ALA A -1 REMARK 465 MET A 0 REMARK 465 ALA A 1 REMARK 465 GLY A 2 REMARK 465 THR A 3 REMARK 465 PRO A 4 REMARK 465 SER A 5 REMARK 465 LYS A 6 REMARK 465 PRO A 7 REMARK 465 ALA A 8 REMARK 465 GLU A 9 REMARK 465 PRO A 10 REMARK 465 ILE A 11 REMARK 465 LEU A 503 REMARK 465 LEU A 504 REMARK 465 LYS A 505 REMARK 465 THR A 506 REMARK 465 THR A 507 REMARK 465 ASN A 508 REMARK 465 ASN A 509 REMARK 465 ASN A 510 REMARK 465 ALA A 511 REMARK 465 THR A 512 REMARK 465 MET A 513 REMARK 465 THR A 514 REMARK 465 ALA A 515 REMARK 465 ALA A 516 REMARK 465 SER A 517 REMARK 465 VAL A 518 REMARK 465 SER A 519 REMARK 465 VAL A 520 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TYR A 42 CB - CA - C ANGL. DEV. = -12.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 14 107.33 -31.18 REMARK 500 ASP A 27 1.52 -69.13 REMARK 500 ILE A 44 -31.38 -135.19 REMARK 500 SER A 70 -65.30 -27.55 REMARK 500 ALA A 78 -122.66 48.54 REMARK 500 ASP A 147 41.70 -75.99 REMARK 500 TYR A 156 16.46 -143.76 REMARK 500 ARG A 225 -45.70 -130.43 REMARK 500 TYR A 383 76.62 -151.76 REMARK 500 ASN A 408 126.96 -173.79 REMARK 500 ASP A 425 57.71 -92.76 REMARK 500 TRP A 463 -132.38 43.79 REMARK 500 SER A 464 -6.62 -56.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2DGA RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITHOUT A SUBSTRATE/INHIBITOR. REMARK 900 RELATED ID: 3AIQ RELATED DB: PDB REMARK 900 RELATED ID: 3AIR RELATED DB: PDB REMARK 900 RELATED ID: 3AIU RELATED DB: PDB REMARK 900 RELATED ID: 3AIV RELATED DB: PDB REMARK 900 RELATED ID: 3AIW RELATED DB: PDB DBREF 3AIS A 1 520 UNP Q1XH05 Q1XH05_WHEAT 50 569 SEQADV 3AIS MET A -44 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS HIS A -43 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS HIS A -42 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS HIS A -41 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS HIS A -40 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS HIS A -39 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS HIS A -38 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS SER A -37 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS SER A -36 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS GLY A -35 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS LEU A -34 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS VAL A -33 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS PRO A -32 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS ARG A -31 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS GLY A -30 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS SER A -29 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS GLY A -28 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS MET A -27 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS LYS A -26 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS GLU A -25 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS THR A -24 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS ALA A -23 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS ALA A -22 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS ALA A -21 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS LYS A -20 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS PHE A -19 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS GLU A -18 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS ARG A -17 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS GLN A -16 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS HIS A -15 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS MET A -14 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS ASP A -13 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS SER A -12 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS PRO A -11 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS ASP A -10 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS LEU A -9 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS GLY A -8 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS THR A -7 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS ASP A -6 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS ASP A -5 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS ASP A -4 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS ASP A -3 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS LYS A -2 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS ALA A -1 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS MET A 0 UNP Q1XH05 EXPRESSION TAG SEQADV 3AIS ALA A 191 UNP Q1XH05 GLU 240 ENGINEERED MUTATION SEQRES 1 A 565 MET HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO SEQRES 2 A 565 ARG GLY SER GLY MET LYS GLU THR ALA ALA ALA LYS PHE SEQRES 3 A 565 GLU ARG GLN HIS MET ASP SER PRO ASP LEU GLY THR ASP SEQRES 4 A 565 ASP ASP ASP LYS ALA MET ALA GLY THR PRO SER LYS PRO SEQRES 5 A 565 ALA GLU PRO ILE GLY PRO VAL PHE THR LYS LEU LYS PRO SEQRES 6 A 565 TRP GLN ILE PRO LYS ARG ASP TRP PHE ASP LYS ASP PHE SEQRES 7 A 565 LEU PHE GLY ALA SER THR SER ALA TYR GLN ILE GLU GLY SEQRES 8 A 565 ALA TRP ASN GLU ASP GLY LYS GLY PRO SER THR TRP ASP SEQRES 9 A 565 HIS PHE CYS HIS THR TYR PRO GLU ARG ILE SER ASP MET SEQRES 10 A 565 THR ASN GLY ASP VAL ALA ALA ASN SER TYR HIS LEU TYR SEQRES 11 A 565 GLU GLU ASP VAL LYS ALA LEU LYS ASP MET GLY MET LYS SEQRES 12 A 565 VAL TYR ARG PHE SER ILE SER TRP SER ARG ILE LEU PRO SEQRES 13 A 565 ASP GLY THR GLY LYS VAL ASN GLN ALA GLY ILE ASP TYR SEQRES 14 A 565 TYR ASN LYS LEU ILE ASN SER LEU ILE ASP ASN ASP ILE SEQRES 15 A 565 VAL PRO TYR VAL THR ILE TRP HIS TRP ASP THR PRO GLN SEQRES 16 A 565 ALA LEU GLU ASP LYS TYR GLY GLY PHE LEU ASN ARG GLN SEQRES 17 A 565 ILE VAL ASP ASP TYR LYS GLN PHE ALA GLU VAL CYS PHE SEQRES 18 A 565 LYS ASN PHE GLY ASP ARG VAL LYS ASN TRP PHE THR PHE SEQRES 19 A 565 ASN ALA PRO HIS THR TYR CYS CYS PHE SER TYR GLY GLU SEQRES 20 A 565 GLY ILE HIS ALA PRO GLY ARG CYS SER PRO GLY MET ASP SEQRES 21 A 565 CYS ALA VAL PRO GLU GLY ASP SER LEU ARG GLU PRO TYR SEQRES 22 A 565 THR ALA GLY HIS HIS ILE LEU LEU ALA HIS ALA GLU ALA SEQRES 23 A 565 VAL GLN LEU PHE LYS ALA ARG TYR ASN MET HIS GLY ASP SEQRES 24 A 565 SER LYS ILE GLY MET ALA PHE ASP VAL MET GLY TYR GLU SEQRES 25 A 565 PRO TYR GLN ASP SER PHE LEU ASP ASP GLN ALA ARG GLU SEQRES 26 A 565 ARG SER ILE ASP TYR ASN MET GLY TRP PHE LEU GLU PRO SEQRES 27 A 565 VAL VAL ARG GLY ASP TYR PRO PHE SER MET ARG SER LEU SEQRES 28 A 565 ILE GLY ASP ARG LEU PRO MET PHE THR LYS GLU GLU GLN SEQRES 29 A 565 GLU LYS LEU ALA SER SER CYS ASP ILE MET GLY LEU ASN SEQRES 30 A 565 TYR TYR THR SER ARG PHE SER LYS HIS VAL ASP MET SER SEQRES 31 A 565 PRO ASP PHE THR PRO THR LEU ASN THR ASP ASP ALA TYR SEQRES 32 A 565 ALA SER SER GLU THR THR GLY SER ASP GLY ASN ASP ILE SEQRES 33 A 565 GLY PRO ILE THR GLY THR TYR TRP ILE TYR MET TYR PRO SEQRES 34 A 565 LYS GLY LEU THR ASP LEU LEU LEU ILE MET LYS GLU LYS SEQRES 35 A 565 TYR GLY ASN PRO PRO VAL PHE ILE THR GLU ASN GLY ILE SEQRES 36 A 565 ALA ASP VAL GLU GLY ASP GLU SER MET PRO ASP PRO LEU SEQRES 37 A 565 ASP ASP TRP LYS ARG LEU ASP TYR LEU GLN ARG HIS ILE SEQRES 38 A 565 SER ALA VAL LYS ASP ALA ILE ASP GLN GLY ALA ASP VAL SEQRES 39 A 565 ARG GLY HIS PHE THR TRP GLY LEU ILE ASP ASN PHE GLU SEQRES 40 A 565 TRP SER LEU GLY TYR SER SER ARG PHE GLY LEU VAL TYR SEQRES 41 A 565 ILE ASP LYS ASN ASP GLY ASN LYS ARG LYS LEU LYS LYS SEQRES 42 A 565 SER ALA LYS TRP PHE SER LYS PHE ASN SER VAL PRO LYS SEQRES 43 A 565 PRO LEU LEU LYS THR THR ASN ASN ASN ALA THR MET THR SEQRES 44 A 565 ALA ALA SER VAL SER VAL HET BGC A 601 11 HET HBK A 600 15 HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM HBK (2S)-2,4-DIHYDROXY-7-METHOXY-2H-1,4-BENZOXAZIN-3(4H)- HETNAM 2 HBK ONE HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 2 BGC C6 H12 O6 FORMUL 3 HBK C9 H9 N O5 FORMUL 4 HOH *303(H2 O) HELIX 1 1 LYS A 19 ILE A 23 5 5 HELIX 2 2 LYS A 25 PHE A 29 5 5 HELIX 3 3 SER A 40 GLU A 45 1 6 HELIX 4 4 SER A 56 TYR A 65 1 10 HELIX 5 5 PRO A 66 ILE A 69 5 4 HELIX 6 6 ASN A 80 GLY A 96 1 17 HELIX 7 7 SER A 105 LEU A 110 1 6 HELIX 8 8 ASN A 118 ASN A 135 1 18 HELIX 9 9 PRO A 149 GLY A 157 1 9 HELIX 10 10 GLY A 158 ARG A 162 5 5 HELIX 11 11 GLN A 163 GLY A 180 1 18 HELIX 12 12 ALA A 191 GLY A 201 1 11 HELIX 13 13 ARG A 225 TYR A 249 1 25 HELIX 14 14 SER A 272 MET A 287 1 16 HELIX 15 15 MET A 287 GLY A 297 1 11 HELIX 16 16 PRO A 300 GLY A 308 1 9 HELIX 17 17 ASP A 309 LEU A 311 5 3 HELIX 18 18 THR A 315 ALA A 323 1 9 HELIX 19 19 LEU A 352 ALA A 357 5 6 HELIX 20 20 PRO A 384 LYS A 397 1 14 HELIX 21 21 ASP A 425 GLN A 445 1 21 HELIX 22 22 GLU A 462 TYR A 467 5 6 HELIX 23 23 LYS A 487 ASN A 497 1 11 SHEET 1 A10 ALA A 359 GLU A 362 0 SHEET 2 A10 MET A 329 HIS A 341 -1 N PHE A 338 O GLU A 362 SHEET 3 A10 VAL A 403 GLU A 407 1 O PHE A 404 N MET A 329 SHEET 4 A10 VAL A 449 TRP A 455 1 O PHE A 453 N ILE A 405 SHEET 5 A10 LEU A 34 SER A 38 1 N LEU A 34 O HIS A 452 SHEET 6 A10 VAL A 99 SER A 103 1 O ARG A 101 N ALA A 37 SHEET 7 A10 VAL A 138 TRP A 144 1 O TYR A 140 N TYR A 100 SHEET 8 A10 ASN A 185 ASN A 190 1 O PHE A 187 N ILE A 143 SHEET 9 A10 LYS A 256 PRO A 268 1 O GLY A 258 N THR A 188 SHEET 10 A10 MET A 329 HIS A 341 1 O GLY A 330 N PHE A 261 SHEET 1 B 2 ASP A 412 VAL A 413 0 SHEET 2 B 2 SER A 469 ARG A 470 -1 O ARG A 470 N ASP A 412 SHEET 1 C 2 VAL A 474 ILE A 476 0 SHEET 2 C 2 ARG A 484 LEU A 486 -1 O LYS A 485 N TYR A 475 SSBOND 1 CYS A 210 CYS A 216 1555 1555 2.03 LINK O1A HBK A 600 C1 BGC A 601 1555 1555 1.44 CISPEP 1 GLY A 12 PRO A 13 0 -0.08 CISPEP 2 ALA A 206 PRO A 207 0 0.38 CRYST1 194.053 194.053 194.053 90.00 90.00 90.00 P 41 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005153 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005153 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005153 0.00000