data_3AKC # _entry.id 3AKC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3AKC pdb_00003akc 10.2210/pdb3akc/pdb RCSB RCSB029358 ? ? WWPDB D_1000029358 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3AKD . unspecified PDB 3AKE . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3AKC _pdbx_database_status.recvd_initial_deposition_date 2010-07-12 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mega, R.' 1 'Nakagawa, N.' 2 'Kuramitsu, S.' 3 'Masui, R.' 4 # _citation.id primary _citation.title ;The crystal structure of the tertiary complex of CMP kinase with a phosphoryl group acceptor and a donor from Thermus thermophilus HB8 ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mega, R.' 1 ? primary 'Nakagawa, N.' 2 ? primary 'Kuramitsu, S.' 3 ? primary 'Masui, R.' 4 ? # _cell.entry_id 3AKC _cell.length_a 62.206 _cell.length_b 62.206 _cell.length_c 110.951 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3AKC _symmetry.space_group_name_H-M 'P 65' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cytidylate kinase' 22584.818 1 2.7.4.14 ? ? ? 2 non-polymer syn "CYTIDINE-5'-DIPHOSPHATE" 403.176 1 ? ? ? ? 3 non-polymer syn "ADENOSINE-5'-DIPHOSPHATE" 427.201 1 ? ? ? ? 4 non-polymer syn 'GADOLINIUM ATOM' 157.250 1 ? ? ? ? 5 water nat water 18.015 116 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'CK, Cytidine monophosphate kinase, CMP kinase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MRGIVTIDGPSASGKSSVARRVAAALGVPYLSSGLLYRAAAFLALRAGVDPGDEEGLLALLEGLGVRLLAQAEGNRVLAD GEDLTSFLHTPEVDRVVSAVARLPGVRAWVNRRLKEVPPPFVAEGRDMGTAVFPEAAHKFYLTASPEVRAWRRARERPQA YEEVLRDLLRRDERDKAQSAPAPDALVLDTGGMTLDEVVAWVLAHIRR ; _entity_poly.pdbx_seq_one_letter_code_can ;MRGIVTIDGPSASGKSSVARRVAAALGVPYLSSGLLYRAAAFLALRAGVDPGDEEGLLALLEGLGVRLLAQAEGNRVLAD GEDLTSFLHTPEVDRVVSAVARLPGVRAWVNRRLKEVPPPFVAEGRDMGTAVFPEAAHKFYLTASPEVRAWRRARERPQA YEEVLRDLLRRDERDKAQSAPAPDALVLDTGGMTLDEVVAWVLAHIRR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ARG n 1 3 GLY n 1 4 ILE n 1 5 VAL n 1 6 THR n 1 7 ILE n 1 8 ASP n 1 9 GLY n 1 10 PRO n 1 11 SER n 1 12 ALA n 1 13 SER n 1 14 GLY n 1 15 LYS n 1 16 SER n 1 17 SER n 1 18 VAL n 1 19 ALA n 1 20 ARG n 1 21 ARG n 1 22 VAL n 1 23 ALA n 1 24 ALA n 1 25 ALA n 1 26 LEU n 1 27 GLY n 1 28 VAL n 1 29 PRO n 1 30 TYR n 1 31 LEU n 1 32 SER n 1 33 SER n 1 34 GLY n 1 35 LEU n 1 36 LEU n 1 37 TYR n 1 38 ARG n 1 39 ALA n 1 40 ALA n 1 41 ALA n 1 42 PHE n 1 43 LEU n 1 44 ALA n 1 45 LEU n 1 46 ARG n 1 47 ALA n 1 48 GLY n 1 49 VAL n 1 50 ASP n 1 51 PRO n 1 52 GLY n 1 53 ASP n 1 54 GLU n 1 55 GLU n 1 56 GLY n 1 57 LEU n 1 58 LEU n 1 59 ALA n 1 60 LEU n 1 61 LEU n 1 62 GLU n 1 63 GLY n 1 64 LEU n 1 65 GLY n 1 66 VAL n 1 67 ARG n 1 68 LEU n 1 69 LEU n 1 70 ALA n 1 71 GLN n 1 72 ALA n 1 73 GLU n 1 74 GLY n 1 75 ASN n 1 76 ARG n 1 77 VAL n 1 78 LEU n 1 79 ALA n 1 80 ASP n 1 81 GLY n 1 82 GLU n 1 83 ASP n 1 84 LEU n 1 85 THR n 1 86 SER n 1 87 PHE n 1 88 LEU n 1 89 HIS n 1 90 THR n 1 91 PRO n 1 92 GLU n 1 93 VAL n 1 94 ASP n 1 95 ARG n 1 96 VAL n 1 97 VAL n 1 98 SER n 1 99 ALA n 1 100 VAL n 1 101 ALA n 1 102 ARG n 1 103 LEU n 1 104 PRO n 1 105 GLY n 1 106 VAL n 1 107 ARG n 1 108 ALA n 1 109 TRP n 1 110 VAL n 1 111 ASN n 1 112 ARG n 1 113 ARG n 1 114 LEU n 1 115 LYS n 1 116 GLU n 1 117 VAL n 1 118 PRO n 1 119 PRO n 1 120 PRO n 1 121 PHE n 1 122 VAL n 1 123 ALA n 1 124 GLU n 1 125 GLY n 1 126 ARG n 1 127 ASP n 1 128 MET n 1 129 GLY n 1 130 THR n 1 131 ALA n 1 132 VAL n 1 133 PHE n 1 134 PRO n 1 135 GLU n 1 136 ALA n 1 137 ALA n 1 138 HIS n 1 139 LYS n 1 140 PHE n 1 141 TYR n 1 142 LEU n 1 143 THR n 1 144 ALA n 1 145 SER n 1 146 PRO n 1 147 GLU n 1 148 VAL n 1 149 ARG n 1 150 ALA n 1 151 TRP n 1 152 ARG n 1 153 ARG n 1 154 ALA n 1 155 ARG n 1 156 GLU n 1 157 ARG n 1 158 PRO n 1 159 GLN n 1 160 ALA n 1 161 TYR n 1 162 GLU n 1 163 GLU n 1 164 VAL n 1 165 LEU n 1 166 ARG n 1 167 ASP n 1 168 LEU n 1 169 LEU n 1 170 ARG n 1 171 ARG n 1 172 ASP n 1 173 GLU n 1 174 ARG n 1 175 ASP n 1 176 LYS n 1 177 ALA n 1 178 GLN n 1 179 SER n 1 180 ALA n 1 181 PRO n 1 182 ALA n 1 183 PRO n 1 184 ASP n 1 185 ALA n 1 186 LEU n 1 187 VAL n 1 188 LEU n 1 189 ASP n 1 190 THR n 1 191 GLY n 1 192 GLY n 1 193 MET n 1 194 THR n 1 195 LEU n 1 196 ASP n 1 197 GLU n 1 198 VAL n 1 199 VAL n 1 200 ALA n 1 201 TRP n 1 202 VAL n 1 203 LEU n 1 204 ALA n 1 205 HIS n 1 206 ILE n 1 207 ARG n 1 208 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene TTHA0458 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain HB8 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermus thermophilus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 300852 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-11a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code KCY_THET8 _struct_ref.pdbx_db_accession Q5SL35 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MRGIVTIDGPSASGKSSVARRVAAALGVPYLSSGLLYRAAAFLALRAGVDPGDEEGLLALLEGLGVRLLAQAEGNRVLAD GEDLTSFLHTPEVDRVVSAVARLPGVRAWVNRRLKEVPPPFVAEGRDMGTAVFPEAAHKFYLTASPEVRAWRRARERPQA YEEVLRDLLRRDERDKAQSAPAPDALVLDTGGMTLDEVVAWVLAHIRR ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3AKC _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 208 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q5SL35 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 208 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 208 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ADP non-polymer n "ADENOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O10 P2' 427.201 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CDP non-polymer . "CYTIDINE-5'-DIPHOSPHATE" ? 'C9 H15 N3 O11 P2' 403.176 GD non-polymer . 'GADOLINIUM ATOM' ? Gd 157.250 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3AKC _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.74 _exptl_crystal.density_percent_sol 55.17 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '0.1M BIS-TRIS propane, 3.5M sodium formate, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 90 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2006-07-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'transparent diamond double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL45XU' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL45XU _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.00000 # _reflns.entry_id 3AKC _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.64 _reflns.number_obs 28624 _reflns.number_all ? _reflns.percent_possible_obs 97.7 _reflns.pdbx_Rmerge_I_obs 0.067 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 17.3 _reflns.pdbx_redundancy 9.2 _reflns.pdbx_netI_over_sigmaI 38.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.65 _reflns_shell.d_res_low 1.71 _reflns_shell.percent_possible_all 84.4 _reflns_shell.Rmerge_I_obs 0.287 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.4 _reflns_shell.pdbx_redundancy 6.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2453 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3AKC _refine.ls_number_reflns_obs 28577 _refine.ls_number_reflns_all 28585 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 1483992.76 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 38.65 _refine.ls_d_res_high 1.65 _refine.ls_percent_reflns_obs 97.6 _refine.ls_R_factor_obs 0.199 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.199 _refine.ls_R_factor_R_free 0.220 _refine.ls_R_factor_R_free_error 0.004 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.9 _refine.ls_number_reflns_R_free 2839 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 21.4 _refine.aniso_B[1][1] 4.49 _refine.aniso_B[2][2] 4.49 _refine.aniso_B[3][3] -8.98 _refine.aniso_B[1][2] 0 _refine.aniso_B[1][3] 0 _refine.aniso_B[2][3] 0 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.4 _refine.solvent_model_param_bsol 43.9577 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'BULK SOLVENT MODEL USED' _refine.pdbx_starting_model 'PDB ENTRY 2CMK' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3AKC _refine_analyze.Luzzati_coordinate_error_obs 0.19 _refine_analyze.Luzzati_sigma_a_obs 0.14 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.22 _refine_analyze.Luzzati_sigma_a_free 0.16 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1591 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 53 _refine_hist.number_atoms_solvent 116 _refine_hist.number_atoms_total 1760 _refine_hist.d_res_high 1.65 _refine_hist.d_res_low 38.65 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.019 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 2.0 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 24.3 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 3.54 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.65 _refine_ls_shell.d_res_low 1.75 _refine_ls_shell.number_reflns_R_work 3936 _refine_ls_shell.R_factor_R_work 0.260 _refine_ls_shell.percent_reflns_obs 90.2 _refine_ls_shell.R_factor_R_free 0.289 _refine_ls_shell.R_factor_R_free_error 0.014 _refine_ls_shell.percent_reflns_R_free 9.9 _refine_ls_shell.number_reflns_R_free 434 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 3439 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 CDP.param CDP.top 'X-RAY DIFFRACTION' 3 ADP.param ADP.top 'X-RAY DIFFRACTION' 4 water.param water.top 'X-RAY DIFFRACTION' 5 Gd3+.param Gd3+.top # _struct.entry_id 3AKC _struct.title 'Crystal structure of CMP kinase in complex with CDP and ADP from Thermus thermophilus HB8' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3AKC _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'CMP kinase, CDP and ADP complex, closed conformation, nucleotide metabolism, TRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 14 ? GLY A 27 ? GLY A 14 GLY A 27 1 ? 14 HELX_P HELX_P2 2 SER A 33 ? GLY A 48 ? SER A 33 GLY A 48 1 ? 16 HELX_P HELX_P3 3 ASP A 53 ? GLY A 65 ? ASP A 53 GLY A 65 1 ? 13 HELX_P HELX_P4 4 THR A 85 ? LEU A 88 ? THR A 85 LEU A 88 5 ? 4 HELX_P HELX_P5 5 THR A 90 ? ARG A 102 ? THR A 90 ARG A 102 1 ? 13 HELX_P HELX_P6 6 LEU A 103 ? GLU A 116 ? LEU A 103 GLU A 116 1 ? 14 HELX_P HELX_P7 7 SER A 145 ? ARG A 155 ? SER A 145 ARG A 155 1 ? 11 HELX_P HELX_P8 8 ALA A 160 ? ASP A 175 ? ALA A 160 ASP A 175 1 ? 16 HELX_P HELX_P9 9 LYS A 176 ? SER A 179 ? LYS A 176 SER A 179 5 ? 4 HELX_P HELX_P10 10 THR A 194 ? ARG A 207 ? THR A 194 ARG A 207 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A SER 16 OG ? ? ? 1_555 D GD . GD ? ? A SER 16 A GD 211 1_555 ? ? ? ? ? ? ? 2.399 ? ? metalc2 metalc ? ? B CDP . O2B ? ? ? 1_555 D GD . GD ? ? A CDP 209 A GD 211 1_555 ? ? ? ? ? ? ? 2.374 ? ? metalc3 metalc ? ? C ADP . O3B ? ? ? 1_555 D GD . GD ? ? A ADP 210 A GD 211 1_555 ? ? ? ? ? ? ? 2.432 ? ? metalc4 metalc ? ? C ADP . O2A ? ? ? 1_555 D GD . GD ? ? A ADP 210 A GD 211 1_555 ? ? ? ? ? ? ? 2.591 ? ? metalc5 metalc ? ? C ADP . O2B ? ? ? 1_555 D GD . GD ? ? A ADP 210 A GD 211 1_555 ? ? ? ? ? ? ? 2.957 ? ? metalc6 metalc ? ? D GD . GD ? ? ? 1_555 E HOH . O ? ? A GD 211 A HOH 218 1_555 ? ? ? ? ? ? ? 2.465 ? ? metalc7 metalc ? ? D GD . GD ? ? ? 1_555 E HOH . O ? ? A GD 211 A HOH 223 1_555 ? ? ? ? ? ? ? 2.429 ? ? metalc8 metalc ? ? D GD . GD ? ? ? 1_555 E HOH . O ? ? A GD 211 A HOH 226 1_555 ? ? ? ? ? ? ? 2.478 ? ? metalc9 metalc ? ? D GD . GD ? ? ? 1_555 E HOH . O ? ? A GD 211 A HOH 269 1_555 ? ? ? ? ? ? ? 2.413 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PRO _struct_mon_prot_cis.label_seq_id 119 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PRO _struct_mon_prot_cis.auth_seq_id 119 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 120 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 120 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.67 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 30 ? SER A 32 ? TYR A 30 SER A 32 A 2 PHE A 121 ? GLY A 125 ? PHE A 121 GLY A 125 A 3 ILE A 4 ? ASP A 8 ? ILE A 4 ASP A 8 A 4 HIS A 138 ? THR A 143 ? HIS A 138 THR A 143 A 5 LEU A 186 ? ASP A 189 ? LEU A 186 ASP A 189 B 1 VAL A 66 ? LEU A 69 ? VAL A 66 LEU A 69 B 2 ARG A 76 ? ALA A 79 ? ARG A 76 ALA A 79 B 3 GLU A 82 ? ASP A 83 ? GLU A 82 ASP A 83 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 31 ? N LEU A 31 O GLU A 124 ? O GLU A 124 A 2 3 O ALA A 123 ? O ALA A 123 N VAL A 5 ? N VAL A 5 A 3 4 N ASP A 8 ? N ASP A 8 O LEU A 142 ? O LEU A 142 A 4 5 N TYR A 141 ? N TYR A 141 O LEU A 186 ? O LEU A 186 B 1 2 N LEU A 69 ? N LEU A 69 O ARG A 76 ? O ARG A 76 B 2 3 N ALA A 79 ? N ALA A 79 O GLU A 82 ? O GLU A 82 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CDP 209 ? 21 'BINDING SITE FOR RESIDUE CDP A 209' AC2 Software A ADP 210 ? 24 'BINDING SITE FOR RESIDUE ADP A 210' AC3 Software A GD 211 ? 7 'BINDING SITE FOR RESIDUE GD A 211' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 21 SER A 11 ? SER A 11 . ? 1_555 ? 2 AC1 21 LYS A 15 ? LYS A 15 . ? 1_555 ? 3 AC1 21 SER A 33 ? SER A 33 . ? 1_555 ? 4 AC1 21 GLY A 34 ? GLY A 34 . ? 1_555 ? 5 AC1 21 TYR A 37 ? TYR A 37 . ? 1_555 ? 6 AC1 21 ARG A 38 ? ARG A 38 . ? 1_555 ? 7 AC1 21 VAL A 97 ? VAL A 97 . ? 1_555 ? 8 AC1 21 ALA A 101 ? ALA A 101 . ? 1_555 ? 9 AC1 21 ARG A 107 ? ARG A 107 . ? 1_555 ? 10 AC1 21 ARG A 126 ? ARG A 126 . ? 1_555 ? 11 AC1 21 ASP A 127 ? ASP A 127 . ? 1_555 ? 12 AC1 21 ARG A 153 ? ARG A 153 . ? 1_555 ? 13 AC1 21 ARG A 171 ? ARG A 171 . ? 1_555 ? 14 AC1 21 ASP A 175 ? ASP A 175 . ? 1_555 ? 15 AC1 21 GLN A 178 ? GLN A 178 . ? 1_555 ? 16 AC1 21 ADP C . ? ADP A 210 . ? 1_555 ? 17 AC1 21 GD D . ? GD A 211 . ? 1_555 ? 18 AC1 21 HOH E . ? HOH A 218 . ? 1_555 ? 19 AC1 21 HOH E . ? HOH A 219 . ? 1_555 ? 20 AC1 21 HOH E . ? HOH A 223 . ? 1_555 ? 21 AC1 21 HOH E . ? HOH A 269 . ? 1_555 ? 22 AC2 24 PRO A 10 ? PRO A 10 . ? 1_555 ? 23 AC2 24 ALA A 12 ? ALA A 12 . ? 1_555 ? 24 AC2 24 SER A 13 ? SER A 13 . ? 1_555 ? 25 AC2 24 GLY A 14 ? GLY A 14 . ? 1_555 ? 26 AC2 24 LYS A 15 ? LYS A 15 . ? 1_555 ? 27 AC2 24 SER A 16 ? SER A 16 . ? 1_555 ? 28 AC2 24 SER A 17 ? SER A 17 . ? 1_555 ? 29 AC2 24 ASP A 80 ? ASP A 80 . ? 5_555 ? 30 AC2 24 GLU A 82 ? GLU A 82 . ? 5_555 ? 31 AC2 24 ARG A 152 ? ARG A 152 . ? 1_555 ? 32 AC2 24 ARG A 153 ? ARG A 153 . ? 1_555 ? 33 AC2 24 ARG A 155 ? ARG A 155 . ? 1_555 ? 34 AC2 24 GLU A 156 ? GLU A 156 . ? 1_555 ? 35 AC2 24 MET A 193 ? MET A 193 . ? 1_555 ? 36 AC2 24 THR A 194 ? THR A 194 . ? 1_555 ? 37 AC2 24 LEU A 195 ? LEU A 195 . ? 1_555 ? 38 AC2 24 CDP B . ? CDP A 209 . ? 1_555 ? 39 AC2 24 GD D . ? GD A 211 . ? 1_555 ? 40 AC2 24 HOH E . ? HOH A 218 . ? 1_555 ? 41 AC2 24 HOH E . ? HOH A 223 . ? 1_555 ? 42 AC2 24 HOH E . ? HOH A 226 . ? 1_555 ? 43 AC2 24 HOH E . ? HOH A 247 . ? 1_555 ? 44 AC2 24 HOH E . ? HOH A 256 . ? 1_555 ? 45 AC2 24 HOH E . ? HOH A 257 . ? 1_555 ? 46 AC3 7 SER A 16 ? SER A 16 . ? 1_555 ? 47 AC3 7 CDP B . ? CDP A 209 . ? 1_555 ? 48 AC3 7 ADP C . ? ADP A 210 . ? 1_555 ? 49 AC3 7 HOH E . ? HOH A 218 . ? 1_555 ? 50 AC3 7 HOH E . ? HOH A 223 . ? 1_555 ? 51 AC3 7 HOH E . ? HOH A 226 . ? 1_555 ? 52 AC3 7 HOH E . ? HOH A 269 . ? 1_555 ? # _database_PDB_matrix.entry_id 3AKC _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3AKC _atom_sites.fract_transf_matrix[1][1] 0.016076 _atom_sites.fract_transf_matrix[1][2] 0.009281 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018563 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009013 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C GD N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ARG 2 2 2 ARG ARG A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 ILE 4 4 4 ILE ILE A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 ASP 8 8 8 ASP ASP A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 SER 13 13 13 SER SER A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 ARG 20 20 20 ARG ARG A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 PRO 29 29 29 PRO PRO A . n A 1 30 TYR 30 30 30 TYR TYR A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 TYR 37 37 37 TYR TYR A . n A 1 38 ARG 38 38 38 ARG ARG A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 PHE 42 42 42 PHE PHE A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 ARG 46 46 46 ARG ARG A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 PRO 51 51 51 PRO PRO A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 ARG 67 67 67 ARG ARG A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 GLN 71 71 71 GLN GLN A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 ASN 75 75 75 ASN ASN A . n A 1 76 ARG 76 76 76 ARG ARG A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 ALA 79 79 79 ALA ALA A . n A 1 80 ASP 80 80 80 ASP ASP A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 ASP 83 83 83 ASP ASP A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 SER 86 86 86 SER SER A . n A 1 87 PHE 87 87 87 PHE PHE A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 HIS 89 89 89 HIS HIS A . n A 1 90 THR 90 90 90 THR THR A . n A 1 91 PRO 91 91 91 PRO PRO A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 ASP 94 94 94 ASP ASP A . n A 1 95 ARG 95 95 95 ARG ARG A . n A 1 96 VAL 96 96 96 VAL VAL A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 SER 98 98 98 SER SER A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 ALA 101 101 101 ALA ALA A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 PRO 104 104 104 PRO PRO A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 VAL 106 106 106 VAL VAL A . n A 1 107 ARG 107 107 107 ARG ARG A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 TRP 109 109 109 TRP TRP A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 ASN 111 111 111 ASN ASN A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 ARG 113 113 113 ARG ARG A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 LYS 115 115 115 LYS LYS A . n A 1 116 GLU 116 116 116 GLU GLU A . n A 1 117 VAL 117 117 117 VAL VAL A . n A 1 118 PRO 118 118 118 PRO PRO A . n A 1 119 PRO 119 119 119 PRO PRO A . n A 1 120 PRO 120 120 120 PRO PRO A . n A 1 121 PHE 121 121 121 PHE PHE A . n A 1 122 VAL 122 122 122 VAL VAL A . n A 1 123 ALA 123 123 123 ALA ALA A . n A 1 124 GLU 124 124 124 GLU GLU A . n A 1 125 GLY 125 125 125 GLY GLY A . n A 1 126 ARG 126 126 126 ARG ARG A . n A 1 127 ASP 127 127 127 ASP ASP A . n A 1 128 MET 128 128 128 MET MET A . n A 1 129 GLY 129 129 129 GLY GLY A . n A 1 130 THR 130 130 130 THR THR A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 VAL 132 132 132 VAL VAL A . n A 1 133 PHE 133 133 133 PHE PHE A . n A 1 134 PRO 134 134 134 PRO PRO A . n A 1 135 GLU 135 135 135 GLU GLU A . n A 1 136 ALA 136 136 136 ALA ALA A . n A 1 137 ALA 137 137 137 ALA ALA A . n A 1 138 HIS 138 138 138 HIS HIS A . n A 1 139 LYS 139 139 139 LYS LYS A . n A 1 140 PHE 140 140 140 PHE PHE A . n A 1 141 TYR 141 141 141 TYR TYR A . n A 1 142 LEU 142 142 142 LEU LEU A . n A 1 143 THR 143 143 143 THR THR A . n A 1 144 ALA 144 144 144 ALA ALA A . n A 1 145 SER 145 145 145 SER SER A . n A 1 146 PRO 146 146 146 PRO PRO A . n A 1 147 GLU 147 147 147 GLU GLU A . n A 1 148 VAL 148 148 148 VAL VAL A . n A 1 149 ARG 149 149 149 ARG ARG A . n A 1 150 ALA 150 150 150 ALA ALA A . n A 1 151 TRP 151 151 151 TRP TRP A . n A 1 152 ARG 152 152 152 ARG ARG A . n A 1 153 ARG 153 153 153 ARG ARG A . n A 1 154 ALA 154 154 154 ALA ALA A . n A 1 155 ARG 155 155 155 ARG ARG A . n A 1 156 GLU 156 156 156 GLU GLU A . n A 1 157 ARG 157 157 157 ARG ARG A . n A 1 158 PRO 158 158 158 PRO PRO A . n A 1 159 GLN 159 159 159 GLN GLN A . n A 1 160 ALA 160 160 160 ALA ALA A . n A 1 161 TYR 161 161 161 TYR TYR A . n A 1 162 GLU 162 162 162 GLU GLU A . n A 1 163 GLU 163 163 163 GLU GLU A . n A 1 164 VAL 164 164 164 VAL VAL A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 ARG 166 166 166 ARG ARG A . n A 1 167 ASP 167 167 167 ASP ASP A . n A 1 168 LEU 168 168 168 LEU LEU A . n A 1 169 LEU 169 169 169 LEU LEU A . n A 1 170 ARG 170 170 170 ARG ARG A . n A 1 171 ARG 171 171 171 ARG ARG A . n A 1 172 ASP 172 172 172 ASP ASP A . n A 1 173 GLU 173 173 173 GLU GLU A . n A 1 174 ARG 174 174 174 ARG ARG A . n A 1 175 ASP 175 175 175 ASP ASP A . n A 1 176 LYS 176 176 176 LYS LYS A . n A 1 177 ALA 177 177 177 ALA ALA A . n A 1 178 GLN 178 178 178 GLN GLN A . n A 1 179 SER 179 179 179 SER SER A . n A 1 180 ALA 180 180 180 ALA ALA A . n A 1 181 PRO 181 181 181 PRO PRO A . n A 1 182 ALA 182 182 182 ALA ALA A . n A 1 183 PRO 183 183 183 PRO PRO A . n A 1 184 ASP 184 184 184 ASP ASP A . n A 1 185 ALA 185 185 185 ALA ALA A . n A 1 186 LEU 186 186 186 LEU LEU A . n A 1 187 VAL 187 187 187 VAL VAL A . n A 1 188 LEU 188 188 188 LEU LEU A . n A 1 189 ASP 189 189 189 ASP ASP A . n A 1 190 THR 190 190 190 THR THR A . n A 1 191 GLY 191 191 191 GLY GLY A . n A 1 192 GLY 192 192 192 GLY GLY A . n A 1 193 MET 193 193 193 MET MET A . n A 1 194 THR 194 194 194 THR THR A . n A 1 195 LEU 195 195 195 LEU LEU A . n A 1 196 ASP 196 196 196 ASP ASP A . n A 1 197 GLU 197 197 197 GLU GLU A . n A 1 198 VAL 198 198 198 VAL VAL A . n A 1 199 VAL 199 199 199 VAL VAL A . n A 1 200 ALA 200 200 200 ALA ALA A . n A 1 201 TRP 201 201 201 TRP TRP A . n A 1 202 VAL 202 202 202 VAL VAL A . n A 1 203 LEU 203 203 203 LEU LEU A . n A 1 204 ALA 204 204 204 ALA ALA A . n A 1 205 HIS 205 205 205 HIS HIS A . n A 1 206 ILE 206 206 206 ILE ILE A . n A 1 207 ARG 207 207 207 ARG ARG A . n A 1 208 ARG 208 208 208 ARG ARG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CDP 1 209 209 CDP CDP A . C 3 ADP 1 210 210 ADP ADP A . D 4 GD 1 211 211 GD GD A . E 5 HOH 1 212 1 HOH TIP A . E 5 HOH 2 213 2 HOH TIP A . E 5 HOH 3 214 3 HOH TIP A . E 5 HOH 4 215 4 HOH TIP A . E 5 HOH 5 216 5 HOH TIP A . E 5 HOH 6 217 6 HOH TIP A . E 5 HOH 7 218 7 HOH TIP A . E 5 HOH 8 219 8 HOH TIP A . E 5 HOH 9 220 10 HOH TIP A . E 5 HOH 10 221 11 HOH TIP A . E 5 HOH 11 222 12 HOH TIP A . E 5 HOH 12 223 13 HOH TIP A . E 5 HOH 13 224 14 HOH TIP A . E 5 HOH 14 225 15 HOH TIP A . E 5 HOH 15 226 16 HOH TIP A . E 5 HOH 16 227 17 HOH TIP A . E 5 HOH 17 228 18 HOH TIP A . E 5 HOH 18 229 19 HOH TIP A . E 5 HOH 19 230 20 HOH TIP A . E 5 HOH 20 231 21 HOH TIP A . E 5 HOH 21 232 22 HOH TIP A . E 5 HOH 22 233 23 HOH TIP A . E 5 HOH 23 234 24 HOH TIP A . E 5 HOH 24 235 25 HOH TIP A . E 5 HOH 25 236 26 HOH TIP A . E 5 HOH 26 237 27 HOH TIP A . E 5 HOH 27 238 28 HOH TIP A . E 5 HOH 28 239 29 HOH TIP A . E 5 HOH 29 240 30 HOH TIP A . E 5 HOH 30 241 31 HOH TIP A . E 5 HOH 31 242 32 HOH TIP A . E 5 HOH 32 243 33 HOH TIP A . E 5 HOH 33 244 34 HOH TIP A . E 5 HOH 34 245 35 HOH TIP A . E 5 HOH 35 246 36 HOH TIP A . E 5 HOH 36 247 37 HOH TIP A . E 5 HOH 37 248 38 HOH TIP A . E 5 HOH 38 249 39 HOH TIP A . E 5 HOH 39 250 40 HOH TIP A . E 5 HOH 40 251 41 HOH TIP A . E 5 HOH 41 252 42 HOH TIP A . E 5 HOH 42 253 43 HOH TIP A . E 5 HOH 43 254 44 HOH TIP A . E 5 HOH 44 255 45 HOH TIP A . E 5 HOH 45 256 46 HOH TIP A . E 5 HOH 46 257 47 HOH TIP A . E 5 HOH 47 258 48 HOH TIP A . E 5 HOH 48 259 49 HOH TIP A . E 5 HOH 49 260 50 HOH TIP A . E 5 HOH 50 261 51 HOH TIP A . E 5 HOH 51 262 52 HOH TIP A . E 5 HOH 52 263 53 HOH TIP A . E 5 HOH 53 264 54 HOH TIP A . E 5 HOH 54 265 55 HOH TIP A . E 5 HOH 55 266 56 HOH TIP A . E 5 HOH 56 267 57 HOH TIP A . E 5 HOH 57 268 58 HOH TIP A . E 5 HOH 58 269 59 HOH TIP A . E 5 HOH 59 270 60 HOH TIP A . E 5 HOH 60 271 61 HOH TIP A . E 5 HOH 61 272 62 HOH TIP A . E 5 HOH 62 273 63 HOH TIP A . E 5 HOH 63 274 64 HOH TIP A . E 5 HOH 64 275 65 HOH TIP A . E 5 HOH 65 276 66 HOH TIP A . E 5 HOH 66 277 67 HOH TIP A . E 5 HOH 67 278 68 HOH TIP A . E 5 HOH 68 279 69 HOH TIP A . E 5 HOH 69 280 70 HOH TIP A . E 5 HOH 70 281 71 HOH TIP A . E 5 HOH 71 282 72 HOH TIP A . E 5 HOH 72 283 73 HOH TIP A . E 5 HOH 73 284 74 HOH TIP A . E 5 HOH 74 285 75 HOH TIP A . E 5 HOH 75 286 76 HOH TIP A . E 5 HOH 76 287 77 HOH TIP A . E 5 HOH 77 288 78 HOH TIP A . E 5 HOH 78 289 79 HOH TIP A . E 5 HOH 79 290 80 HOH TIP A . E 5 HOH 80 291 81 HOH TIP A . E 5 HOH 81 292 82 HOH TIP A . E 5 HOH 82 293 83 HOH TIP A . E 5 HOH 83 294 84 HOH TIP A . E 5 HOH 84 295 85 HOH TIP A . E 5 HOH 85 296 86 HOH TIP A . E 5 HOH 86 297 87 HOH TIP A . E 5 HOH 87 298 88 HOH TIP A . E 5 HOH 88 299 89 HOH TIP A . E 5 HOH 89 300 90 HOH TIP A . E 5 HOH 90 301 91 HOH TIP A . E 5 HOH 91 302 92 HOH TIP A . E 5 HOH 92 303 93 HOH TIP A . E 5 HOH 93 304 94 HOH TIP A . E 5 HOH 94 305 95 HOH TIP A . E 5 HOH 95 306 96 HOH TIP A . E 5 HOH 96 307 97 HOH TIP A . E 5 HOH 97 308 98 HOH TIP A . E 5 HOH 98 309 99 HOH TIP A . E 5 HOH 99 310 100 HOH TIP A . E 5 HOH 100 311 101 HOH TIP A . E 5 HOH 101 312 102 HOH TIP A . E 5 HOH 102 313 103 HOH TIP A . E 5 HOH 103 314 104 HOH TIP A . E 5 HOH 104 315 105 HOH TIP A . E 5 HOH 105 316 106 HOH TIP A . E 5 HOH 106 317 107 HOH TIP A . E 5 HOH 107 318 108 HOH TIP A . E 5 HOH 108 319 109 HOH TIP A . E 5 HOH 109 320 110 HOH TIP A . E 5 HOH 110 321 111 HOH TIP A . E 5 HOH 111 322 112 HOH TIP A . E 5 HOH 112 323 113 HOH TIP A . E 5 HOH 113 324 114 HOH TIP A . E 5 HOH 114 325 115 HOH TIP A . E 5 HOH 115 326 116 HOH TIP A . E 5 HOH 116 327 117 HOH TIP A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG ? A SER 16 ? A SER 16 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O2B ? B CDP . ? A CDP 209 ? 1_555 139.2 ? 2 OG ? A SER 16 ? A SER 16 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O3B ? C ADP . ? A ADP 210 ? 1_555 76.9 ? 3 O2B ? B CDP . ? A CDP 209 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O3B ? C ADP . ? A ADP 210 ? 1_555 99.9 ? 4 OG ? A SER 16 ? A SER 16 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O2A ? C ADP . ? A ADP 210 ? 1_555 84.7 ? 5 O2B ? B CDP . ? A CDP 209 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O2A ? C ADP . ? A ADP 210 ? 1_555 132.9 ? 6 O3B ? C ADP . ? A ADP 210 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O2A ? C ADP . ? A ADP 210 ? 1_555 69.2 ? 7 OG ? A SER 16 ? A SER 16 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O2B ? C ADP . ? A ADP 210 ? 1_555 128.7 ? 8 O2B ? B CDP . ? A CDP 209 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O2B ? C ADP . ? A ADP 210 ? 1_555 69.1 ? 9 O3B ? C ADP . ? A ADP 210 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O2B ? C ADP . ? A ADP 210 ? 1_555 53.2 ? 10 O2A ? C ADP . ? A ADP 210 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O2B ? C ADP . ? A ADP 210 ? 1_555 68.3 ? 11 OG ? A SER 16 ? A SER 16 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 218 ? 1_555 62.6 ? 12 O2B ? B CDP . ? A CDP 209 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 218 ? 1_555 76.9 ? 13 O3B ? C ADP . ? A ADP 210 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 218 ? 1_555 76.9 ? 14 O2A ? C ADP . ? A ADP 210 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 218 ? 1_555 137.4 ? 15 O2B ? C ADP . ? A ADP 210 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 218 ? 1_555 110.3 ? 16 OG ? A SER 16 ? A SER 16 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 223 ? 1_555 137.1 ? 17 O2B ? B CDP . ? A CDP 209 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 223 ? 1_555 78.4 ? 18 O3B ? C ADP . ? A ADP 210 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 223 ? 1_555 124.7 ? 19 O2A ? C ADP . ? A ADP 210 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 223 ? 1_555 72.8 ? 20 O2B ? C ADP . ? A ADP 210 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 223 ? 1_555 76.2 ? 21 O ? E HOH . ? A HOH 218 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 223 ? 1_555 149.8 ? 22 OG ? A SER 16 ? A SER 16 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 226 ? 1_555 71.5 ? 23 O2B ? B CDP . ? A CDP 209 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 226 ? 1_555 127.7 ? 24 O3B ? C ADP . ? A ADP 210 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 226 ? 1_555 131.8 ? 25 O2A ? C ADP . ? A ADP 210 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 226 ? 1_555 72.5 ? 26 O2B ? C ADP . ? A ADP 210 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 226 ? 1_555 132.4 ? 27 O ? E HOH . ? A HOH 218 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 226 ? 1_555 116.8 ? 28 O ? E HOH . ? A HOH 223 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 226 ? 1_555 67.1 ? 29 OG ? A SER 16 ? A SER 16 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 269 ? 1_555 93.0 ? 30 O2B ? B CDP . ? A CDP 209 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 269 ? 1_555 67.9 ? 31 O3B ? C ADP . ? A ADP 210 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 269 ? 1_555 147.8 ? 32 O2A ? C ADP . ? A ADP 210 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 269 ? 1_555 141.1 ? 33 O2B ? C ADP . ? A ADP 210 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 269 ? 1_555 135.2 ? 34 O ? E HOH . ? A HOH 218 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 269 ? 1_555 71.4 ? 35 O ? E HOH . ? A HOH 223 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 269 ? 1_555 83.4 ? 36 O ? E HOH . ? A HOH 226 ? 1_555 GD ? D GD . ? A GD 211 ? 1_555 O ? E HOH . ? A HOH 269 ? 1_555 70.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-07-06 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.value' 16 3 'Structure model' '_struct_conn.pdbx_dist_value' 17 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 27 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 28 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 29 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 30 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 ARP/wARP 'model building' 7.1 ? 2 CNS refinement 1.2 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ADP PB P N N 1 ADP O1B O N N 2 ADP O2B O N N 3 ADP O3B O N N 4 ADP PA P N S 5 ADP O1A O N N 6 ADP O2A O N N 7 ADP O3A O N N 8 ADP "O5'" O N N 9 ADP "C5'" C N N 10 ADP "C4'" C N R 11 ADP "O4'" O N N 12 ADP "C3'" C N S 13 ADP "O3'" O N N 14 ADP "C2'" C N R 15 ADP "O2'" O N N 16 ADP "C1'" C N R 17 ADP N9 N Y N 18 ADP C8 C Y N 19 ADP N7 N Y N 20 ADP C5 C Y N 21 ADP C6 C Y N 22 ADP N6 N N N 23 ADP N1 N Y N 24 ADP C2 C Y N 25 ADP N3 N Y N 26 ADP C4 C Y N 27 ADP HOB2 H N N 28 ADP HOB3 H N N 29 ADP HOA2 H N N 30 ADP "H5'1" H N N 31 ADP "H5'2" H N N 32 ADP "H4'" H N N 33 ADP "H3'" H N N 34 ADP "HO3'" H N N 35 ADP "H2'" H N N 36 ADP "HO2'" H N N 37 ADP "H1'" H N N 38 ADP H8 H N N 39 ADP HN61 H N N 40 ADP HN62 H N N 41 ADP H2 H N N 42 ALA N N N N 43 ALA CA C N S 44 ALA C C N N 45 ALA O O N N 46 ALA CB C N N 47 ALA OXT O N N 48 ALA H H N N 49 ALA H2 H N N 50 ALA HA H N N 51 ALA HB1 H N N 52 ALA HB2 H N N 53 ALA HB3 H N N 54 ALA HXT H N N 55 ARG N N N N 56 ARG CA C N S 57 ARG C C N N 58 ARG O O N N 59 ARG CB C N N 60 ARG CG C N N 61 ARG CD C N N 62 ARG NE N N N 63 ARG CZ C N N 64 ARG NH1 N N N 65 ARG NH2 N N N 66 ARG OXT O N N 67 ARG H H N N 68 ARG H2 H N N 69 ARG HA H N N 70 ARG HB2 H N N 71 ARG HB3 H N N 72 ARG HG2 H N N 73 ARG HG3 H N N 74 ARG HD2 H N N 75 ARG HD3 H N N 76 ARG HE H N N 77 ARG HH11 H N N 78 ARG HH12 H N N 79 ARG HH21 H N N 80 ARG HH22 H N N 81 ARG HXT H N N 82 ASN N N N N 83 ASN CA C N S 84 ASN C C N N 85 ASN O O N N 86 ASN CB C N N 87 ASN CG C N N 88 ASN OD1 O N N 89 ASN ND2 N N N 90 ASN OXT O N N 91 ASN H H N N 92 ASN H2 H N N 93 ASN HA H N N 94 ASN HB2 H N N 95 ASN HB3 H N N 96 ASN HD21 H N N 97 ASN HD22 H N N 98 ASN HXT H N N 99 ASP N N N N 100 ASP CA C N S 101 ASP C C N N 102 ASP O O N N 103 ASP CB C N N 104 ASP CG C N N 105 ASP OD1 O N N 106 ASP OD2 O N N 107 ASP OXT O N N 108 ASP H H N N 109 ASP H2 H N N 110 ASP HA H N N 111 ASP HB2 H N N 112 ASP HB3 H N N 113 ASP HD2 H N N 114 ASP HXT H N N 115 CDP O3B O N N 116 CDP PB P N N 117 CDP O1B O N N 118 CDP O2B O N N 119 CDP O3A O N N 120 CDP PA P N R 121 CDP O1A O N N 122 CDP O2A O N N 123 CDP "O5'" O N N 124 CDP "C5'" C N N 125 CDP "C4'" C N R 126 CDP "O4'" O N N 127 CDP "C3'" C N S 128 CDP "O3'" O N N 129 CDP "C2'" C N R 130 CDP "O2'" O N N 131 CDP "C1'" C N R 132 CDP N1 N N N 133 CDP C2 C N N 134 CDP O2 O N N 135 CDP N3 N N N 136 CDP C4 C N N 137 CDP N4 N N N 138 CDP C5 C N N 139 CDP C6 C N N 140 CDP "H5'1" H N N 141 CDP "H5'2" H N N 142 CDP "H4'" H N N 143 CDP "H3'" H N N 144 CDP HA H N N 145 CDP "H2'" H N N 146 CDP HB H N N 147 CDP "H1'" H N N 148 CDP H4N1 H N N 149 CDP H4N2 H N N 150 CDP H5 H N N 151 CDP H6 H N N 152 CDP HO1 H N N 153 CDP HO2 H N N 154 CDP HO3 H N N 155 GD GD GD N N 156 GLN N N N N 157 GLN CA C N S 158 GLN C C N N 159 GLN O O N N 160 GLN CB C N N 161 GLN CG C N N 162 GLN CD C N N 163 GLN OE1 O N N 164 GLN NE2 N N N 165 GLN OXT O N N 166 GLN H H N N 167 GLN H2 H N N 168 GLN HA H N N 169 GLN HB2 H N N 170 GLN HB3 H N N 171 GLN HG2 H N N 172 GLN HG3 H N N 173 GLN HE21 H N N 174 GLN HE22 H N N 175 GLN HXT H N N 176 GLU N N N N 177 GLU CA C N S 178 GLU C C N N 179 GLU O O N N 180 GLU CB C N N 181 GLU CG C N N 182 GLU CD C N N 183 GLU OE1 O N N 184 GLU OE2 O N N 185 GLU OXT O N N 186 GLU H H N N 187 GLU H2 H N N 188 GLU HA H N N 189 GLU HB2 H N N 190 GLU HB3 H N N 191 GLU HG2 H N N 192 GLU HG3 H N N 193 GLU HE2 H N N 194 GLU HXT H N N 195 GLY N N N N 196 GLY CA C N N 197 GLY C C N N 198 GLY O O N N 199 GLY OXT O N N 200 GLY H H N N 201 GLY H2 H N N 202 GLY HA2 H N N 203 GLY HA3 H N N 204 GLY HXT H N N 205 HIS N N N N 206 HIS CA C N S 207 HIS C C N N 208 HIS O O N N 209 HIS CB C N N 210 HIS CG C Y N 211 HIS ND1 N Y N 212 HIS CD2 C Y N 213 HIS CE1 C Y N 214 HIS NE2 N Y N 215 HIS OXT O N N 216 HIS H H N N 217 HIS H2 H N N 218 HIS HA H N N 219 HIS HB2 H N N 220 HIS HB3 H N N 221 HIS HD1 H N N 222 HIS HD2 H N N 223 HIS HE1 H N N 224 HIS HE2 H N N 225 HIS HXT H N N 226 HOH O O N N 227 HOH H1 H N N 228 HOH H2 H N N 229 ILE N N N N 230 ILE CA C N S 231 ILE C C N N 232 ILE O O N N 233 ILE CB C N S 234 ILE CG1 C N N 235 ILE CG2 C N N 236 ILE CD1 C N N 237 ILE OXT O N N 238 ILE H H N N 239 ILE H2 H N N 240 ILE HA H N N 241 ILE HB H N N 242 ILE HG12 H N N 243 ILE HG13 H N N 244 ILE HG21 H N N 245 ILE HG22 H N N 246 ILE HG23 H N N 247 ILE HD11 H N N 248 ILE HD12 H N N 249 ILE HD13 H N N 250 ILE HXT H N N 251 LEU N N N N 252 LEU CA C N S 253 LEU C C N N 254 LEU O O N N 255 LEU CB C N N 256 LEU CG C N N 257 LEU CD1 C N N 258 LEU CD2 C N N 259 LEU OXT O N N 260 LEU H H N N 261 LEU H2 H N N 262 LEU HA H N N 263 LEU HB2 H N N 264 LEU HB3 H N N 265 LEU HG H N N 266 LEU HD11 H N N 267 LEU HD12 H N N 268 LEU HD13 H N N 269 LEU HD21 H N N 270 LEU HD22 H N N 271 LEU HD23 H N N 272 LEU HXT H N N 273 LYS N N N N 274 LYS CA C N S 275 LYS C C N N 276 LYS O O N N 277 LYS CB C N N 278 LYS CG C N N 279 LYS CD C N N 280 LYS CE C N N 281 LYS NZ N N N 282 LYS OXT O N N 283 LYS H H N N 284 LYS H2 H N N 285 LYS HA H N N 286 LYS HB2 H N N 287 LYS HB3 H N N 288 LYS HG2 H N N 289 LYS HG3 H N N 290 LYS HD2 H N N 291 LYS HD3 H N N 292 LYS HE2 H N N 293 LYS HE3 H N N 294 LYS HZ1 H N N 295 LYS HZ2 H N N 296 LYS HZ3 H N N 297 LYS HXT H N N 298 MET N N N N 299 MET CA C N S 300 MET C C N N 301 MET O O N N 302 MET CB C N N 303 MET CG C N N 304 MET SD S N N 305 MET CE C N N 306 MET OXT O N N 307 MET H H N N 308 MET H2 H N N 309 MET HA H N N 310 MET HB2 H N N 311 MET HB3 H N N 312 MET HG2 H N N 313 MET HG3 H N N 314 MET HE1 H N N 315 MET HE2 H N N 316 MET HE3 H N N 317 MET HXT H N N 318 PHE N N N N 319 PHE CA C N S 320 PHE C C N N 321 PHE O O N N 322 PHE CB C N N 323 PHE CG C Y N 324 PHE CD1 C Y N 325 PHE CD2 C Y N 326 PHE CE1 C Y N 327 PHE CE2 C Y N 328 PHE CZ C Y N 329 PHE OXT O N N 330 PHE H H N N 331 PHE H2 H N N 332 PHE HA H N N 333 PHE HB2 H N N 334 PHE HB3 H N N 335 PHE HD1 H N N 336 PHE HD2 H N N 337 PHE HE1 H N N 338 PHE HE2 H N N 339 PHE HZ H N N 340 PHE HXT H N N 341 PRO N N N N 342 PRO CA C N S 343 PRO C C N N 344 PRO O O N N 345 PRO CB C N N 346 PRO CG C N N 347 PRO CD C N N 348 PRO OXT O N N 349 PRO H H N N 350 PRO HA H N N 351 PRO HB2 H N N 352 PRO HB3 H N N 353 PRO HG2 H N N 354 PRO HG3 H N N 355 PRO HD2 H N N 356 PRO HD3 H N N 357 PRO HXT H N N 358 SER N N N N 359 SER CA C N S 360 SER C C N N 361 SER O O N N 362 SER CB C N N 363 SER OG O N N 364 SER OXT O N N 365 SER H H N N 366 SER H2 H N N 367 SER HA H N N 368 SER HB2 H N N 369 SER HB3 H N N 370 SER HG H N N 371 SER HXT H N N 372 THR N N N N 373 THR CA C N S 374 THR C C N N 375 THR O O N N 376 THR CB C N R 377 THR OG1 O N N 378 THR CG2 C N N 379 THR OXT O N N 380 THR H H N N 381 THR H2 H N N 382 THR HA H N N 383 THR HB H N N 384 THR HG1 H N N 385 THR HG21 H N N 386 THR HG22 H N N 387 THR HG23 H N N 388 THR HXT H N N 389 TRP N N N N 390 TRP CA C N S 391 TRP C C N N 392 TRP O O N N 393 TRP CB C N N 394 TRP CG C Y N 395 TRP CD1 C Y N 396 TRP CD2 C Y N 397 TRP NE1 N Y N 398 TRP CE2 C Y N 399 TRP CE3 C Y N 400 TRP CZ2 C Y N 401 TRP CZ3 C Y N 402 TRP CH2 C Y N 403 TRP OXT O N N 404 TRP H H N N 405 TRP H2 H N N 406 TRP HA H N N 407 TRP HB2 H N N 408 TRP HB3 H N N 409 TRP HD1 H N N 410 TRP HE1 H N N 411 TRP HE3 H N N 412 TRP HZ2 H N N 413 TRP HZ3 H N N 414 TRP HH2 H N N 415 TRP HXT H N N 416 TYR N N N N 417 TYR CA C N S 418 TYR C C N N 419 TYR O O N N 420 TYR CB C N N 421 TYR CG C Y N 422 TYR CD1 C Y N 423 TYR CD2 C Y N 424 TYR CE1 C Y N 425 TYR CE2 C Y N 426 TYR CZ C Y N 427 TYR OH O N N 428 TYR OXT O N N 429 TYR H H N N 430 TYR H2 H N N 431 TYR HA H N N 432 TYR HB2 H N N 433 TYR HB3 H N N 434 TYR HD1 H N N 435 TYR HD2 H N N 436 TYR HE1 H N N 437 TYR HE2 H N N 438 TYR HH H N N 439 TYR HXT H N N 440 VAL N N N N 441 VAL CA C N S 442 VAL C C N N 443 VAL O O N N 444 VAL CB C N N 445 VAL CG1 C N N 446 VAL CG2 C N N 447 VAL OXT O N N 448 VAL H H N N 449 VAL H2 H N N 450 VAL HA H N N 451 VAL HB H N N 452 VAL HG11 H N N 453 VAL HG12 H N N 454 VAL HG13 H N N 455 VAL HG21 H N N 456 VAL HG22 H N N 457 VAL HG23 H N N 458 VAL HXT H N N 459 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ADP PB O1B doub N N 1 ADP PB O2B sing N N 2 ADP PB O3B sing N N 3 ADP PB O3A sing N N 4 ADP O2B HOB2 sing N N 5 ADP O3B HOB3 sing N N 6 ADP PA O1A doub N N 7 ADP PA O2A sing N N 8 ADP PA O3A sing N N 9 ADP PA "O5'" sing N N 10 ADP O2A HOA2 sing N N 11 ADP "O5'" "C5'" sing N N 12 ADP "C5'" "C4'" sing N N 13 ADP "C5'" "H5'1" sing N N 14 ADP "C5'" "H5'2" sing N N 15 ADP "C4'" "O4'" sing N N 16 ADP "C4'" "C3'" sing N N 17 ADP "C4'" "H4'" sing N N 18 ADP "O4'" "C1'" sing N N 19 ADP "C3'" "O3'" sing N N 20 ADP "C3'" "C2'" sing N N 21 ADP "C3'" "H3'" sing N N 22 ADP "O3'" "HO3'" sing N N 23 ADP "C2'" "O2'" sing N N 24 ADP "C2'" "C1'" sing N N 25 ADP "C2'" "H2'" sing N N 26 ADP "O2'" "HO2'" sing N N 27 ADP "C1'" N9 sing N N 28 ADP "C1'" "H1'" sing N N 29 ADP N9 C8 sing Y N 30 ADP N9 C4 sing Y N 31 ADP C8 N7 doub Y N 32 ADP C8 H8 sing N N 33 ADP N7 C5 sing Y N 34 ADP C5 C6 sing Y N 35 ADP C5 C4 doub Y N 36 ADP C6 N6 sing N N 37 ADP C6 N1 doub Y N 38 ADP N6 HN61 sing N N 39 ADP N6 HN62 sing N N 40 ADP N1 C2 sing Y N 41 ADP C2 N3 doub Y N 42 ADP C2 H2 sing N N 43 ADP N3 C4 sing Y N 44 ALA N CA sing N N 45 ALA N H sing N N 46 ALA N H2 sing N N 47 ALA CA C sing N N 48 ALA CA CB sing N N 49 ALA CA HA sing N N 50 ALA C O doub N N 51 ALA C OXT sing N N 52 ALA CB HB1 sing N N 53 ALA CB HB2 sing N N 54 ALA CB HB3 sing N N 55 ALA OXT HXT sing N N 56 ARG N CA sing N N 57 ARG N H sing N N 58 ARG N H2 sing N N 59 ARG CA C sing N N 60 ARG CA CB sing N N 61 ARG CA HA sing N N 62 ARG C O doub N N 63 ARG C OXT sing N N 64 ARG CB CG sing N N 65 ARG CB HB2 sing N N 66 ARG CB HB3 sing N N 67 ARG CG CD sing N N 68 ARG CG HG2 sing N N 69 ARG CG HG3 sing N N 70 ARG CD NE sing N N 71 ARG CD HD2 sing N N 72 ARG CD HD3 sing N N 73 ARG NE CZ sing N N 74 ARG NE HE sing N N 75 ARG CZ NH1 sing N N 76 ARG CZ NH2 doub N N 77 ARG NH1 HH11 sing N N 78 ARG NH1 HH12 sing N N 79 ARG NH2 HH21 sing N N 80 ARG NH2 HH22 sing N N 81 ARG OXT HXT sing N N 82 ASN N CA sing N N 83 ASN N H sing N N 84 ASN N H2 sing N N 85 ASN CA C sing N N 86 ASN CA CB sing N N 87 ASN CA HA sing N N 88 ASN C O doub N N 89 ASN C OXT sing N N 90 ASN CB CG sing N N 91 ASN CB HB2 sing N N 92 ASN CB HB3 sing N N 93 ASN CG OD1 doub N N 94 ASN CG ND2 sing N N 95 ASN ND2 HD21 sing N N 96 ASN ND2 HD22 sing N N 97 ASN OXT HXT sing N N 98 ASP N CA sing N N 99 ASP N H sing N N 100 ASP N H2 sing N N 101 ASP CA C sing N N 102 ASP CA CB sing N N 103 ASP CA HA sing N N 104 ASP C O doub N N 105 ASP C OXT sing N N 106 ASP CB CG sing N N 107 ASP CB HB2 sing N N 108 ASP CB HB3 sing N N 109 ASP CG OD1 doub N N 110 ASP CG OD2 sing N N 111 ASP OD2 HD2 sing N N 112 ASP OXT HXT sing N N 113 CDP O3B PB sing N N 114 CDP PB O1B doub N N 115 CDP PB O2B sing N N 116 CDP PB O3A sing N N 117 CDP O3A PA sing N N 118 CDP PA O1A doub N N 119 CDP PA O2A sing N N 120 CDP PA "O5'" sing N N 121 CDP "O5'" "C5'" sing N N 122 CDP "C5'" "C4'" sing N N 123 CDP "C5'" "H5'1" sing N N 124 CDP "C5'" "H5'2" sing N N 125 CDP "C4'" "O4'" sing N N 126 CDP "C4'" "C3'" sing N N 127 CDP "C4'" "H4'" sing N N 128 CDP "O4'" "C1'" sing N N 129 CDP "C3'" "O3'" sing N N 130 CDP "C3'" "C2'" sing N N 131 CDP "C3'" "H3'" sing N N 132 CDP "O3'" HA sing N N 133 CDP "C2'" "O2'" sing N N 134 CDP "C2'" "C1'" sing N N 135 CDP "C2'" "H2'" sing N N 136 CDP "O2'" HB sing N N 137 CDP "C1'" N1 sing N N 138 CDP "C1'" "H1'" sing N N 139 CDP N1 C2 sing N N 140 CDP N1 C6 sing N N 141 CDP C2 O2 doub N N 142 CDP C2 N3 sing N N 143 CDP N3 C4 doub N N 144 CDP C4 N4 sing N N 145 CDP C4 C5 sing N N 146 CDP N4 H4N1 sing N N 147 CDP N4 H4N2 sing N N 148 CDP C5 C6 doub N N 149 CDP C5 H5 sing N N 150 CDP C6 H6 sing N N 151 CDP HO1 O2A sing N N 152 CDP HO2 O2B sing N N 153 CDP HO3 O3B sing N N 154 GLN N CA sing N N 155 GLN N H sing N N 156 GLN N H2 sing N N 157 GLN CA C sing N N 158 GLN CA CB sing N N 159 GLN CA HA sing N N 160 GLN C O doub N N 161 GLN C OXT sing N N 162 GLN CB CG sing N N 163 GLN CB HB2 sing N N 164 GLN CB HB3 sing N N 165 GLN CG CD sing N N 166 GLN CG HG2 sing N N 167 GLN CG HG3 sing N N 168 GLN CD OE1 doub N N 169 GLN CD NE2 sing N N 170 GLN NE2 HE21 sing N N 171 GLN NE2 HE22 sing N N 172 GLN OXT HXT sing N N 173 GLU N CA sing N N 174 GLU N H sing N N 175 GLU N H2 sing N N 176 GLU CA C sing N N 177 GLU CA CB sing N N 178 GLU CA HA sing N N 179 GLU C O doub N N 180 GLU C OXT sing N N 181 GLU CB CG sing N N 182 GLU CB HB2 sing N N 183 GLU CB HB3 sing N N 184 GLU CG CD sing N N 185 GLU CG HG2 sing N N 186 GLU CG HG3 sing N N 187 GLU CD OE1 doub N N 188 GLU CD OE2 sing N N 189 GLU OE2 HE2 sing N N 190 GLU OXT HXT sing N N 191 GLY N CA sing N N 192 GLY N H sing N N 193 GLY N H2 sing N N 194 GLY CA C sing N N 195 GLY CA HA2 sing N N 196 GLY CA HA3 sing N N 197 GLY C O doub N N 198 GLY C OXT sing N N 199 GLY OXT HXT sing N N 200 HIS N CA sing N N 201 HIS N H sing N N 202 HIS N H2 sing N N 203 HIS CA C sing N N 204 HIS CA CB sing N N 205 HIS CA HA sing N N 206 HIS C O doub N N 207 HIS C OXT sing N N 208 HIS CB CG sing N N 209 HIS CB HB2 sing N N 210 HIS CB HB3 sing N N 211 HIS CG ND1 sing Y N 212 HIS CG CD2 doub Y N 213 HIS ND1 CE1 doub Y N 214 HIS ND1 HD1 sing N N 215 HIS CD2 NE2 sing Y N 216 HIS CD2 HD2 sing N N 217 HIS CE1 NE2 sing Y N 218 HIS CE1 HE1 sing N N 219 HIS NE2 HE2 sing N N 220 HIS OXT HXT sing N N 221 HOH O H1 sing N N 222 HOH O H2 sing N N 223 ILE N CA sing N N 224 ILE N H sing N N 225 ILE N H2 sing N N 226 ILE CA C sing N N 227 ILE CA CB sing N N 228 ILE CA HA sing N N 229 ILE C O doub N N 230 ILE C OXT sing N N 231 ILE CB CG1 sing N N 232 ILE CB CG2 sing N N 233 ILE CB HB sing N N 234 ILE CG1 CD1 sing N N 235 ILE CG1 HG12 sing N N 236 ILE CG1 HG13 sing N N 237 ILE CG2 HG21 sing N N 238 ILE CG2 HG22 sing N N 239 ILE CG2 HG23 sing N N 240 ILE CD1 HD11 sing N N 241 ILE CD1 HD12 sing N N 242 ILE CD1 HD13 sing N N 243 ILE OXT HXT sing N N 244 LEU N CA sing N N 245 LEU N H sing N N 246 LEU N H2 sing N N 247 LEU CA C sing N N 248 LEU CA CB sing N N 249 LEU CA HA sing N N 250 LEU C O doub N N 251 LEU C OXT sing N N 252 LEU CB CG sing N N 253 LEU CB HB2 sing N N 254 LEU CB HB3 sing N N 255 LEU CG CD1 sing N N 256 LEU CG CD2 sing N N 257 LEU CG HG sing N N 258 LEU CD1 HD11 sing N N 259 LEU CD1 HD12 sing N N 260 LEU CD1 HD13 sing N N 261 LEU CD2 HD21 sing N N 262 LEU CD2 HD22 sing N N 263 LEU CD2 HD23 sing N N 264 LEU OXT HXT sing N N 265 LYS N CA sing N N 266 LYS N H sing N N 267 LYS N H2 sing N N 268 LYS CA C sing N N 269 LYS CA CB sing N N 270 LYS CA HA sing N N 271 LYS C O doub N N 272 LYS C OXT sing N N 273 LYS CB CG sing N N 274 LYS CB HB2 sing N N 275 LYS CB HB3 sing N N 276 LYS CG CD sing N N 277 LYS CG HG2 sing N N 278 LYS CG HG3 sing N N 279 LYS CD CE sing N N 280 LYS CD HD2 sing N N 281 LYS CD HD3 sing N N 282 LYS CE NZ sing N N 283 LYS CE HE2 sing N N 284 LYS CE HE3 sing N N 285 LYS NZ HZ1 sing N N 286 LYS NZ HZ2 sing N N 287 LYS NZ HZ3 sing N N 288 LYS OXT HXT sing N N 289 MET N CA sing N N 290 MET N H sing N N 291 MET N H2 sing N N 292 MET CA C sing N N 293 MET CA CB sing N N 294 MET CA HA sing N N 295 MET C O doub N N 296 MET C OXT sing N N 297 MET CB CG sing N N 298 MET CB HB2 sing N N 299 MET CB HB3 sing N N 300 MET CG SD sing N N 301 MET CG HG2 sing N N 302 MET CG HG3 sing N N 303 MET SD CE sing N N 304 MET CE HE1 sing N N 305 MET CE HE2 sing N N 306 MET CE HE3 sing N N 307 MET OXT HXT sing N N 308 PHE N CA sing N N 309 PHE N H sing N N 310 PHE N H2 sing N N 311 PHE CA C sing N N 312 PHE CA CB sing N N 313 PHE CA HA sing N N 314 PHE C O doub N N 315 PHE C OXT sing N N 316 PHE CB CG sing N N 317 PHE CB HB2 sing N N 318 PHE CB HB3 sing N N 319 PHE CG CD1 doub Y N 320 PHE CG CD2 sing Y N 321 PHE CD1 CE1 sing Y N 322 PHE CD1 HD1 sing N N 323 PHE CD2 CE2 doub Y N 324 PHE CD2 HD2 sing N N 325 PHE CE1 CZ doub Y N 326 PHE CE1 HE1 sing N N 327 PHE CE2 CZ sing Y N 328 PHE CE2 HE2 sing N N 329 PHE CZ HZ sing N N 330 PHE OXT HXT sing N N 331 PRO N CA sing N N 332 PRO N CD sing N N 333 PRO N H sing N N 334 PRO CA C sing N N 335 PRO CA CB sing N N 336 PRO CA HA sing N N 337 PRO C O doub N N 338 PRO C OXT sing N N 339 PRO CB CG sing N N 340 PRO CB HB2 sing N N 341 PRO CB HB3 sing N N 342 PRO CG CD sing N N 343 PRO CG HG2 sing N N 344 PRO CG HG3 sing N N 345 PRO CD HD2 sing N N 346 PRO CD HD3 sing N N 347 PRO OXT HXT sing N N 348 SER N CA sing N N 349 SER N H sing N N 350 SER N H2 sing N N 351 SER CA C sing N N 352 SER CA CB sing N N 353 SER CA HA sing N N 354 SER C O doub N N 355 SER C OXT sing N N 356 SER CB OG sing N N 357 SER CB HB2 sing N N 358 SER CB HB3 sing N N 359 SER OG HG sing N N 360 SER OXT HXT sing N N 361 THR N CA sing N N 362 THR N H sing N N 363 THR N H2 sing N N 364 THR CA C sing N N 365 THR CA CB sing N N 366 THR CA HA sing N N 367 THR C O doub N N 368 THR C OXT sing N N 369 THR CB OG1 sing N N 370 THR CB CG2 sing N N 371 THR CB HB sing N N 372 THR OG1 HG1 sing N N 373 THR CG2 HG21 sing N N 374 THR CG2 HG22 sing N N 375 THR CG2 HG23 sing N N 376 THR OXT HXT sing N N 377 TRP N CA sing N N 378 TRP N H sing N N 379 TRP N H2 sing N N 380 TRP CA C sing N N 381 TRP CA CB sing N N 382 TRP CA HA sing N N 383 TRP C O doub N N 384 TRP C OXT sing N N 385 TRP CB CG sing N N 386 TRP CB HB2 sing N N 387 TRP CB HB3 sing N N 388 TRP CG CD1 doub Y N 389 TRP CG CD2 sing Y N 390 TRP CD1 NE1 sing Y N 391 TRP CD1 HD1 sing N N 392 TRP CD2 CE2 doub Y N 393 TRP CD2 CE3 sing Y N 394 TRP NE1 CE2 sing Y N 395 TRP NE1 HE1 sing N N 396 TRP CE2 CZ2 sing Y N 397 TRP CE3 CZ3 doub Y N 398 TRP CE3 HE3 sing N N 399 TRP CZ2 CH2 doub Y N 400 TRP CZ2 HZ2 sing N N 401 TRP CZ3 CH2 sing Y N 402 TRP CZ3 HZ3 sing N N 403 TRP CH2 HH2 sing N N 404 TRP OXT HXT sing N N 405 TYR N CA sing N N 406 TYR N H sing N N 407 TYR N H2 sing N N 408 TYR CA C sing N N 409 TYR CA CB sing N N 410 TYR CA HA sing N N 411 TYR C O doub N N 412 TYR C OXT sing N N 413 TYR CB CG sing N N 414 TYR CB HB2 sing N N 415 TYR CB HB3 sing N N 416 TYR CG CD1 doub Y N 417 TYR CG CD2 sing Y N 418 TYR CD1 CE1 sing Y N 419 TYR CD1 HD1 sing N N 420 TYR CD2 CE2 doub Y N 421 TYR CD2 HD2 sing N N 422 TYR CE1 CZ doub Y N 423 TYR CE1 HE1 sing N N 424 TYR CE2 CZ sing Y N 425 TYR CE2 HE2 sing N N 426 TYR CZ OH sing N N 427 TYR OH HH sing N N 428 TYR OXT HXT sing N N 429 VAL N CA sing N N 430 VAL N H sing N N 431 VAL N H2 sing N N 432 VAL CA C sing N N 433 VAL CA CB sing N N 434 VAL CA HA sing N N 435 VAL C O doub N N 436 VAL C OXT sing N N 437 VAL CB CG1 sing N N 438 VAL CB CG2 sing N N 439 VAL CB HB sing N N 440 VAL CG1 HG11 sing N N 441 VAL CG1 HG12 sing N N 442 VAL CG1 HG13 sing N N 443 VAL CG2 HG21 sing N N 444 VAL CG2 HG22 sing N N 445 VAL CG2 HG23 sing N N 446 VAL OXT HXT sing N N 447 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "CYTIDINE-5'-DIPHOSPHATE" CDP 3 "ADENOSINE-5'-DIPHOSPHATE" ADP 4 'GADOLINIUM ATOM' GD 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2CMK _pdbx_initial_refinement_model.details 'PDB ENTRY 2CMK' #