HEADER TRANSFERASE 20-AUG-10 3AML TITLE STRUCTURE OF THE STARCH BRANCHING ENZYME I (BEI) FROM ORYZA SATIVA L COMPND MOL_ID: 1; COMPND 2 MOLECULE: OS06G0726400 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 66-820; COMPND 5 SYNONYM: STARCH-BRANCHING ENZYME I; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYZA SATIVA JAPONICA GROUP; SOURCE 3 ORGANISM_COMMON: JAPANESE RICE; SOURCE 4 ORGANISM_TAXID: 39947; SOURCE 5 GENE: OS06G0726400, SBE1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STARCH-BRANCHING, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.KAKUTA,K.CHAEN,J.NOGUCHI,N.VU,M.KIMURA REVDAT 2 01-NOV-23 3AML 1 REMARK REVDAT 1 28-SEP-11 3AML 0 JRNL AUTH J.NOGUCHI,K.CHAEN,N.T.VU,T.AKASAKA,H.SHIMADA,T.NAKASHIMA, JRNL AUTH 2 A.NISHI,H.SATOH,T.OMORI,Y.KAKUTA,M.KIMURA JRNL TITL CRYSTAL STRUCTURE OF THE BRANCHING ENZYME I (BEI) FROM ORYZA JRNL TITL 2 SATIVA L WITH IMPLICATIONS FOR CATALYSIS AND SUBSTRATE JRNL TITL 3 BINDING. JRNL REF GLYCOBIOLOGY V. 21 1108 2011 JRNL REFN ISSN 0959-6658 JRNL PMID 21493662 JRNL DOI 10.1093/GLYCOB/CWR049 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.12 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 74258 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.149 REMARK 3 R VALUE (WORKING SET) : 0.146 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3931 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5172 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.70 REMARK 3 BIN R VALUE (WORKING SET) : 0.2600 REMARK 3 BIN FREE R VALUE SET COUNT : 275 REMARK 3 BIN FREE R VALUE : 0.3120 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5642 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 235 REMARK 3 SOLVENT ATOMS : 688 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.10000 REMARK 3 B22 (A**2) : -0.09000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.03000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.102 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.067 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.530 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.975 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6266 ; 0.029 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8465 ; 2.246 ; 1.958 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 767 ; 6.401 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 321 ;36.399 ;23.427 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1033 ;14.502 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 43 ;18.537 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 832 ; 0.187 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4833 ; 0.014 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3573 ; 1.414 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5795 ; 2.179 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2693 ; 3.424 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2634 ; 4.973 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7 A 699 REMARK 3 ORIGIN FOR THE GROUP (A): 25.2510 50.4430 40.4020 REMARK 3 T TENSOR REMARK 3 T11: 0.0035 T22: 0.0686 REMARK 3 T33: 0.0529 T12: -0.0025 REMARK 3 T13: 0.0024 T23: -0.0070 REMARK 3 L TENSOR REMARK 3 L11: 0.1105 L22: 0.6616 REMARK 3 L33: 0.4054 L12: -0.0276 REMARK 3 L13: 0.0482 L23: -0.2721 REMARK 3 S TENSOR REMARK 3 S11: -0.0128 S12: -0.0023 S13: 0.0061 REMARK 3 S21: 0.0036 S22: 0.0218 S23: 0.0092 REMARK 3 S31: -0.0210 S32: -0.0049 S33: -0.0090 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3AML COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-SEP-10. REMARK 100 THE DEPOSITION ID IS D_1000029435. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL38B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 78213 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : 0.08500 REMARK 200 FOR THE DATA SET : 20.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.81300 REMARK 200 R SYM FOR SHELL (I) : 0.81300 REMARK 200 FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1M7X REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293.4K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 62.42500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 THR A 3 REMARK 465 VAL A 4 REMARK 465 VAL A 5 REMARK 465 GLU A 6 REMARK 465 LEU A 700 REMARK 465 ARG A 701 REMARK 465 ARG A 702 REMARK 465 GLY A 703 REMARK 465 GLY A 704 REMARK 465 ALA A 705 REMARK 465 VAL A 706 REMARK 465 ALA A 707 REMARK 465 SER A 708 REMARK 465 GLY A 709 REMARK 465 LYS A 710 REMARK 465 ILE A 711 REMARK 465 VAL A 712 REMARK 465 THR A 713 REMARK 465 GLU A 714 REMARK 465 TYR A 715 REMARK 465 ILE A 716 REMARK 465 ASP A 717 REMARK 465 VAL A 718 REMARK 465 GLU A 719 REMARK 465 ALA A 720 REMARK 465 THR A 721 REMARK 465 SER A 722 REMARK 465 GLY A 723 REMARK 465 GLU A 724 REMARK 465 THR A 725 REMARK 465 ILE A 726 REMARK 465 SER A 727 REMARK 465 GLY A 728 REMARK 465 GLY A 729 REMARK 465 TRP A 730 REMARK 465 LYS A 731 REMARK 465 GLY A 732 REMARK 465 SER A 733 REMARK 465 GLU A 734 REMARK 465 LYS A 735 REMARK 465 ASP A 736 REMARK 465 ASP A 737 REMARK 465 CYS A 738 REMARK 465 GLY A 739 REMARK 465 LYS A 740 REMARK 465 LYS A 741 REMARK 465 GLY A 742 REMARK 465 MET A 743 REMARK 465 LYS A 744 REMARK 465 PHE A 745 REMARK 465 VAL A 746 REMARK 465 PHE A 747 REMARK 465 ARG A 748 REMARK 465 SER A 749 REMARK 465 SER A 750 REMARK 465 ASP A 751 REMARK 465 GLU A 752 REMARK 465 ASP A 753 REMARK 465 CYS A 754 REMARK 465 LYS A 755 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 7 CG CD OE1 OE2 REMARK 470 ASP A 468 CB CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 920 O HOH A 1349 1.99 REMARK 500 SG CYS A 460 S2 BME A 756 2.01 REMARK 500 O HOH A 1070 O HOH A 1388 2.12 REMARK 500 O1 GOL A 770 O HOH A 1421 2.12 REMARK 500 SG CYS A 39 S2 BME A 763 2.16 REMARK 500 OE2 GLU A 335 O HOH A 838 2.16 REMARK 500 O HOH A 1058 O HOH A 1458 2.18 REMARK 500 O3 GOL A 787 O HOH A 1295 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 52 CB SER A 52 OG 0.091 REMARK 500 GLU A 96 CG GLU A 96 CD 0.093 REMARK 500 GLU A 96 CD GLU A 96 OE2 0.081 REMARK 500 TYR A 184 CE1 TYR A 184 CZ 0.081 REMARK 500 ASN A 206 CB ASN A 206 CG 0.145 REMARK 500 VAL A 237 CB VAL A 237 CG2 0.145 REMARK 500 VAL A 267 CB VAL A 267 CG2 0.132 REMARK 500 TYR A 297 CE1 TYR A 297 CZ 0.090 REMARK 500 TRP A 332 CZ3 TRP A 332 CH2 0.098 REMARK 500 GLU A 335 CB GLU A 335 CG 0.117 REMARK 500 CYS A 550 CB CYS A 550 SG -0.100 REMARK 500 CYS A 550 CB CYS A 550 SG -0.118 REMARK 500 TYR A 566 CE2 TYR A 566 CD2 0.099 REMARK 500 PHE A 671 CZ PHE A 671 CE2 0.128 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE A 51 CB - CG - CD2 ANGL. DEV. = -4.3 DEGREES REMARK 500 ASP A 98 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ARG A 142 CG - CD - NE ANGL. DEV. = -13.3 DEGREES REMARK 500 ARG A 142 NE - CZ - NH1 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG A 142 NE - CZ - NH2 ANGL. DEV. = 3.4 DEGREES REMARK 500 LEU A 221 CB - CG - CD1 ANGL. DEV. = 10.4 DEGREES REMARK 500 ARG A 246 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG A 246 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 LEU A 308 CA - CB - CG ANGL. DEV. = 15.0 DEGREES REMARK 500 ASN A 357 C - N - CA ANGL. DEV. = -23.9 DEGREES REMARK 500 ARG A 685 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 8 73.47 -165.87 REMARK 500 ALA A 73 73.37 -156.25 REMARK 500 ALA A 148 21.86 86.32 REMARK 500 LYS A 150 160.07 10.26 REMARK 500 PHE A 151 16.36 57.83 REMARK 500 ALA A 153 -155.81 176.80 REMARK 500 PRO A 154 -172.16 -67.38 REMARK 500 ASP A 161 75.09 -151.35 REMARK 500 ASN A 357 35.05 -90.70 REMARK 500 MET A 404 118.27 -38.64 REMARK 500 ILE A 471 -94.97 -119.37 REMARK 500 ASP A 483 -135.03 51.78 REMARK 500 ASP A 483 -136.52 51.78 REMARK 500 MET A 526 112.85 -27.00 REMARK 500 GLU A 534 -135.71 67.70 REMARK 500 ASN A 617 -11.89 -146.08 REMARK 500 ASP A 628 -73.22 -88.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 150 PHE A 151 -132.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME A 756 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 757 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE A 758 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 759 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 760 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 761 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 762 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME A 763 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 764 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 765 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SIN A 766 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 767 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 768 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 769 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 770 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 771 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 772 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 773 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 774 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 775 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 776 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 777 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 778 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 779 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 780 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 781 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 782 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 783 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 784 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 785 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 786 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 787 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 788 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SIN A 789 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 790 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 791 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 792 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 793 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3AMK RELATED DB: PDB REMARK 900 TRUNCATED STRUCTURE DBREF 3AML A 1 755 UNP Q0D9D0 Q0D9D0_ORYSJ 66 820 SEQRES 1 A 755 MET VAL THR VAL VAL GLU GLU VAL ASP HIS LEU PRO ILE SEQRES 2 A 755 TYR ASP LEU ASP PRO LYS LEU GLU GLU PHE LYS ASP HIS SEQRES 3 A 755 PHE ASN TYR ARG ILE LYS ARG TYR LEU ASP GLN LYS CYS SEQRES 4 A 755 LEU ILE GLU LYS HIS GLU GLY GLY LEU GLU GLU PHE SER SEQRES 5 A 755 LYS GLY TYR LEU LYS PHE GLY ILE ASN THR VAL ASP GLY SEQRES 6 A 755 ALA THR ILE TYR ARG GLU TRP ALA PRO ALA ALA GLN GLU SEQRES 7 A 755 ALA GLN LEU ILE GLY GLU PHE ASN ASN TRP ASN GLY ALA SEQRES 8 A 755 LYS HIS LYS MET GLU LYS ASP LYS PHE GLY ILE TRP SER SEQRES 9 A 755 ILE LYS ILE SER HIS VAL ASN GLY LYS PRO ALA ILE PRO SEQRES 10 A 755 HIS ASN SER LYS VAL LYS PHE ARG PHE ARG HIS GLY GLY SEQRES 11 A 755 GLY ALA TRP VAL ASP ARG ILE PRO ALA TRP ILE ARG TYR SEQRES 12 A 755 ALA THR PHE ASP ALA SER LYS PHE GLY ALA PRO TYR ASP SEQRES 13 A 755 GLY VAL HIS TRP ASP PRO PRO ALA CYS GLU ARG TYR VAL SEQRES 14 A 755 PHE LYS HIS PRO ARG PRO PRO LYS PRO ASP ALA PRO ARG SEQRES 15 A 755 ILE TYR GLU ALA HIS VAL GLY MET SER GLY GLU GLU PRO SEQRES 16 A 755 GLU VAL SER THR TYR ARG GLU PHE ALA ASP ASN VAL LEU SEQRES 17 A 755 PRO ARG ILE ARG ALA ASN ASN TYR ASN THR VAL GLN LEU SEQRES 18 A 755 MET ALA ILE MET GLU HIS SER TYR TYR ALA SER PHE GLY SEQRES 19 A 755 TYR HIS VAL THR ASN PHE PHE ALA VAL SER SER ARG SER SEQRES 20 A 755 GLY THR PRO GLU ASP LEU LYS TYR LEU VAL ASP LYS ALA SEQRES 21 A 755 HIS SER LEU GLY LEU ARG VAL LEU MET ASP VAL VAL HIS SEQRES 22 A 755 SER HIS ALA SER ASN ASN VAL THR ASP GLY LEU ASN GLY SEQRES 23 A 755 TYR ASP VAL GLY GLN ASN THR HIS GLU SER TYR PHE HIS SEQRES 24 A 755 THR GLY ASP ARG GLY TYR HIS LYS LEU TRP ASP SER ARG SEQRES 25 A 755 LEU PHE ASN TYR ALA ASN TRP GLU VAL LEU ARG PHE LEU SEQRES 26 A 755 LEU SER ASN LEU ARG TYR TRP MET ASP GLU PHE MET PHE SEQRES 27 A 755 ASP GLY PHE ARG PHE ASP GLY VAL THR SER MET LEU TYR SEQRES 28 A 755 HIS HIS HIS GLY ILE ASN LYS GLY PHE THR GLY ASN TYR SEQRES 29 A 755 LYS GLU TYR PHE SER LEU ASP THR ASP VAL ASP ALA ILE SEQRES 30 A 755 VAL TYR MET MET LEU ALA ASN HIS LEU MET HIS LYS LEU SEQRES 31 A 755 LEU PRO GLU ALA THR ILE VAL ALA GLU ASP VAL SER GLY SEQRES 32 A 755 MET PRO VAL LEU CYS ARG PRO VAL ASP GLU GLY GLY VAL SEQRES 33 A 755 GLY PHE ASP PHE ARG LEU ALA MET ALA ILE PRO ASP ARG SEQRES 34 A 755 TRP ILE ASP TYR LEU LYS ASN LYS GLU ASP ARG LYS TRP SEQRES 35 A 755 SER MET SER GLU ILE VAL GLN THR LEU THR ASN ARG ARG SEQRES 36 A 755 TYR THR GLU LYS CYS ILE ALA TYR ALA GLU SER HIS ASP SEQRES 37 A 755 GLN SER ILE VAL GLY ASP LYS THR ILE ALA PHE LEU LEU SEQRES 38 A 755 MET ASP LYS GLU MET TYR THR GLY MET SER ASP LEU GLN SEQRES 39 A 755 PRO ALA SER PRO THR ILE ASN ARG GLY ILE ALA LEU GLN SEQRES 40 A 755 LYS MET ILE HIS PHE ILE THR MET ALA LEU GLY GLY ASP SEQRES 41 A 755 GLY TYR LEU ASN PHE MET GLY ASN GLU PHE GLY HIS PRO SEQRES 42 A 755 GLU TRP ILE ASP PHE PRO ARG GLU GLY ASN ASN TRP SER SEQRES 43 A 755 TYR ASP LYS CYS ARG ARG GLN TRP SER LEU VAL ASP THR SEQRES 44 A 755 ASP HIS LEU ARG TYR LYS TYR MET ASN ALA PHE ASP GLN SEQRES 45 A 755 ALA MET ASN ALA LEU GLU GLU GLU PHE SER PHE LEU SER SEQRES 46 A 755 SER SER LYS GLN ILE VAL SER ASP MET ASN GLU LYS ASP SEQRES 47 A 755 LYS VAL ILE VAL PHE GLU ARG GLY ASP LEU VAL PHE VAL SEQRES 48 A 755 PHE ASN PHE HIS PRO ASN LYS THR TYR LYS GLY TYR LYS SEQRES 49 A 755 VAL GLY CYS ASP LEU PRO GLY LYS TYR ARG VAL ALA LEU SEQRES 50 A 755 ASP SER ASP ALA LEU VAL PHE GLY GLY HIS GLY ARG VAL SEQRES 51 A 755 GLY HIS ASP VAL ASP HIS PHE THR SER PRO GLU GLY MET SEQRES 52 A 755 PRO GLY VAL PRO GLU THR ASN PHE ASN ASN ARG PRO ASN SEQRES 53 A 755 SER PHE LYS VAL LEU SER PRO PRO ARG THR CYS VAL ALA SEQRES 54 A 755 TYR TYR ARG VAL ASP GLU ASP ARG GLU GLU LEU ARG ARG SEQRES 55 A 755 GLY GLY ALA VAL ALA SER GLY LYS ILE VAL THR GLU TYR SEQRES 56 A 755 ILE ASP VAL GLU ALA THR SER GLY GLU THR ILE SER GLY SEQRES 57 A 755 GLY TRP LYS GLY SER GLU LYS ASP ASP CYS GLY LYS LYS SEQRES 58 A 755 GLY MET LYS PHE VAL PHE ARG SER SER ASP GLU ASP CYS SEQRES 59 A 755 LYS HET BME A 756 4 HET GOL A 757 6 HET EPE A 758 15 HET GOL A 759 6 HET GOL A 760 6 HET ACT A 761 4 HET GOL A 762 6 HET BME A 763 4 HET GOL A 764 6 HET GOL A 765 6 HET SIN A 766 8 HET GOL A 767 6 HET GOL A 768 6 HET GOL A 769 6 HET GOL A 770 6 HET GOL A 771 6 HET GOL A 772 6 HET GOL A 773 6 HET GOL A 774 6 HET GOL A 775 6 HET GOL A 776 6 HET GOL A 777 6 HET GOL A 778 6 HET GOL A 779 6 HET GOL A 780 6 HET GOL A 781 6 HET GOL A 782 6 HET GOL A 783 6 HET GOL A 784 6 HET GOL A 785 6 HET GOL A 786 6 HET GOL A 787 6 HET GOL A 788 6 HET SIN A 789 8 HET GOL A 790 6 HET GOL A 791 6 HET GOL A 792 6 HET GOL A 793 6 HETNAM BME BETA-MERCAPTOETHANOL HETNAM GOL GLYCEROL HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETNAM ACT ACETATE ION HETNAM SIN SUCCINIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EPE HEPES FORMUL 2 BME 2(C2 H6 O S) FORMUL 3 GOL 32(C3 H8 O3) FORMUL 4 EPE C8 H18 N2 O4 S FORMUL 7 ACT C2 H3 O2 1- FORMUL 12 SIN 2(C4 H6 O4) FORMUL 40 HOH *688(H2 O) HELIX 1 1 PRO A 12 ASP A 17 1 6 HELIX 2 2 PRO A 18 GLU A 22 5 5 HELIX 3 3 PHE A 23 GLY A 46 1 24 HELIX 4 4 GLY A 47 SER A 52 1 6 HELIX 5 5 LYS A 53 LYS A 57 5 5 HELIX 6 6 PHE A 85 ASN A 87 5 3 HELIX 7 7 PRO A 163 ARG A 167 5 5 HELIX 8 8 THR A 199 VAL A 207 1 9 HELIX 9 9 VAL A 207 ASN A 214 1 8 HELIX 10 10 TYR A 229 PHE A 233 5 5 HELIX 11 11 SER A 245 GLY A 248 5 4 HELIX 12 12 THR A 249 LEU A 263 1 15 HELIX 13 13 GLY A 283 ASP A 288 5 6 HELIX 14 14 ASN A 292 SER A 296 5 5 HELIX 15 15 THR A 300 ARG A 303 5 4 HELIX 16 16 ASN A 318 MET A 337 1 20 HELIX 17 17 GLY A 345 TYR A 351 1 7 HELIX 18 18 ASN A 363 TYR A 367 5 5 HELIX 19 19 ASP A 373 LEU A 391 1 19 HELIX 20 20 PRO A 410 GLY A 414 5 5 HELIX 21 21 ALA A 425 LYS A 437 1 13 HELIX 22 22 GLU A 438 TRP A 442 5 5 HELIX 23 23 SER A 443 ASN A 453 1 11 HELIX 24 24 THR A 476 ASP A 483 1 8 HELIX 25 25 LYS A 484 GLY A 489 1 6 HELIX 26 26 SER A 497 GLY A 519 1 23 HELIX 27 27 GLY A 527 GLY A 531 5 5 HELIX 28 28 ARG A 540 ASN A 544 5 5 HELIX 29 29 GLN A 553 THR A 559 1 7 HELIX 30 30 ARG A 563 SER A 582 1 20 HELIX 31 31 PHE A 583 SER A 586 5 4 HELIX 32 32 ALA A 641 GLY A 645 5 5 HELIX 33 33 VAL A 666 ASN A 670 5 5 SHEET 1 A 4 GLY A 59 VAL A 63 0 SHEET 2 A 4 ALA A 66 TRP A 72 -1 O ILE A 68 N ASN A 61 SHEET 3 A 4 ILE A 102 SER A 108 -1 O ILE A 107 N THR A 67 SHEET 4 A 4 GLU A 96 LYS A 97 -1 N GLU A 96 O SER A 104 SHEET 1 B 3 GLU A 78 GLY A 83 0 SHEET 2 B 3 SER A 120 ARG A 127 -1 O LYS A 123 N ILE A 82 SHEET 3 B 3 VAL A 134 ARG A 136 -1 O ARG A 136 N PHE A 124 SHEET 1 C 4 GLU A 78 GLY A 83 0 SHEET 2 C 4 SER A 120 ARG A 127 -1 O LYS A 123 N ILE A 82 SHEET 3 C 4 TYR A 155 HIS A 159 -1 O HIS A 159 N SER A 120 SHEET 4 C 4 ALA A 144 PHE A 146 -1 N THR A 145 O ASP A 156 SHEET 1 D 9 ARG A 182 HIS A 187 0 SHEET 2 D 9 THR A 218 MET A 222 1 O THR A 218 N TYR A 184 SHEET 3 D 9 ARG A 266 VAL A 271 1 O LEU A 268 N LEU A 221 SHEET 4 D 9 GLY A 340 PHE A 343 1 O ARG A 342 N VAL A 271 SHEET 5 D 9 THR A 395 ALA A 398 1 O VAL A 397 N PHE A 343 SHEET 6 D 9 PHE A 420 LEU A 422 1 O PHE A 420 N ALA A 398 SHEET 7 D 9 CYS A 460 ALA A 462 1 O ILE A 461 N ARG A 421 SHEET 8 D 9 GLY A 521 PHE A 525 1 O GLY A 521 N ALA A 462 SHEET 9 D 9 ARG A 182 HIS A 187 1 N ILE A 183 O TYR A 522 SHEET 1 E 2 MET A 225 GLU A 226 0 SHEET 2 E 2 ASN A 239 VAL A 243 -1 O ALA A 242 N GLU A 226 SHEET 1 F 2 TYR A 305 HIS A 306 0 SHEET 2 F 2 SER A 311 ARG A 312 -1 O SER A 311 N HIS A 306 SHEET 1 G 6 GLN A 589 ASN A 595 0 SHEET 2 G 6 VAL A 600 ARG A 605 -1 O VAL A 600 N ASN A 595 SHEET 3 G 6 LEU A 608 ASN A 613 -1 O PHE A 610 N PHE A 603 SHEET 4 G 6 THR A 686 ARG A 692 -1 O TYR A 690 N VAL A 609 SHEET 5 G 6 LYS A 632 ASP A 638 -1 N ALA A 636 O ALA A 689 SHEET 6 G 6 HIS A 656 PHE A 657 -1 O HIS A 656 N TYR A 633 SHEET 1 H 3 TYR A 620 CYS A 627 0 SHEET 2 H 3 ASN A 676 SER A 682 -1 O PHE A 678 N VAL A 625 SHEET 3 H 3 SER A 659 PRO A 660 -1 N SER A 659 O SER A 677 CISPEP 1 GLU A 7 VAL A 8 0 -12.50 CISPEP 2 VAL A 8 ASP A 9 0 1.39 CISPEP 3 ALA A 153 PRO A 154 0 -4.75 CISPEP 4 LYS A 358 GLY A 359 0 3.66 SITE 1 AC1 7 ARG A 421 LEU A 422 ALA A 423 ASN A 453 SITE 2 AC1 7 ARG A 454 CYS A 460 SIN A 766 SITE 1 AC2 6 GLU A 185 ARG A 342 GLU A 399 SER A 466 SITE 2 AC2 6 HIS A 467 HOH A1166 SITE 1 AC3 8 HIS A 44 PHE A 100 TRP A 319 GLU A 320 SITE 2 AC3 8 GOL A 780 HOH A 995 HOH A1004 HOH A1307 SITE 1 AC4 8 ARG A 174 LYS A 307 MET A 333 ASP A 334 SITE 2 AC4 8 ASN A 357 LEU A 390 HOH A 799 HOH A1069 SITE 1 AC5 4 ASP A 492 ARG A 563 GOL A 764 HOH A1390 SITE 1 AC6 1 GLY A 473 SITE 1 AC7 8 ASN A 384 HIS A 388 PRO A 410 VAL A 411 SITE 2 AC7 8 ASP A 412 GLY A 417 HOH A1155 HOH A1243 SITE 1 AC8 3 ASP A 36 CYS A 39 LEU A 40 SITE 1 AC9 6 ARG A 563 TYR A 566 LEU A 642 GLY A 646 SITE 2 AC9 6 GOL A 760 GOL A 765 SITE 1 BC1 5 TYR A 566 LEU A 642 GOL A 764 GOL A 770 SITE 2 BC1 5 HOH A 857 SITE 1 BC2 9 ASP A 400 GLY A 403 ARG A 421 ARG A 455 SITE 2 BC2 9 BME A 756 HOH A 825 HOH A1144 HOH A1196 SITE 3 BC2 9 HOH A1222 SITE 1 BC3 3 LYS A 94 GLU A 96 HOH A 973 SITE 1 BC4 5 GLY A 622 TYR A 623 LYS A 624 PHE A 671 SITE 2 BC4 5 HOH A1220 SITE 1 BC5 8 ARG A 182 ARG A 212 TYR A 216 ASN A 217 SITE 2 BC5 8 GLY A 264 GLU A 579 HOH A1229 HOH A1427 SITE 1 BC6 6 ALA A 569 VAL A 643 GOL A 765 GOL A 787 SITE 2 BC6 6 HOH A1113 HOH A1421 SITE 1 BC7 11 PHE A 146 GLY A 152 ALA A 153 TYR A 155 SITE 2 BC7 11 SER A 228 ARG A 246 PRO A 664 GLY A 665 SITE 3 BC7 11 VAL A 666 HOH A 808 HOH A1020 SITE 1 BC8 4 ARG A 454 ARG A 455 TYR A 456 THR A 457 SITE 1 BC9 5 GLU A 84 PHE A 85 PRO A 117 HOH A1095 SITE 2 BC9 5 HOH A1383 SITE 1 CC1 3 GLY A 301 HOH A 814 HOH A1331 SITE 1 CC2 7 ARG A 440 LYS A 441 GLU A 580 PHE A 581 SITE 2 CC2 7 ALA A 636 TYR A 691 HOH A1139 SITE 1 CC3 4 SER A 555 HIS A 561 HOH A1257 HOH A1470 SITE 1 CC4 5 TRP A 160 GLU A 251 LYS A 254 TYR A 331 SITE 2 CC4 5 GLU A 335 SITE 1 CC5 4 LYS A 57 PHE A 58 ARG A 70 ARG A 323 SITE 1 CC6 1 VAL A 411 SITE 1 CC7 8 TRP A 72 PHE A 100 HIS A 294 GLU A 295 SITE 2 CC7 8 EPE A 758 HOH A1096 HOH A1169 HOH A1467 SITE 1 CC8 8 GLY A 189 TYR A 200 ALA A 223 HIS A 227 SITE 2 CC8 8 SER A 244 ARG A 246 SER A 247 HOH A 940 SITE 1 CC9 6 ARG A 649 GLY A 651 LEU A 681 SIN A 789 SITE 2 CC9 6 HOH A1053 HOH A1329 SITE 1 DC1 3 ASP A 15 TRP A 88 ARG A 125 SITE 1 DC2 6 GLU A 196 PRO A 630 ASN A 676 HOH A 855 SITE 2 DC2 6 HOH A1076 HOH A1450 SITE 1 DC3 5 PRO A 74 ALA A 75 LYS A 97 GLU A 295 SITE 2 DC3 5 HOH A1305 SITE 1 DC4 10 LYS A 177 PRO A 178 ASP A 179 PRO A 181 SITE 2 DC4 10 PHE A 420 LYS A 459 HOH A 876 HOH A 971 SITE 3 DC4 10 HOH A 974 HOH A1428 SITE 1 DC5 6 LYS A 565 ASN A 568 ALA A 569 GLN A 572 SITE 2 DC5 6 GOL A 770 HOH A1295 SITE 1 DC6 4 ASP A 439 PRO A 616 ARG A 685 HOH A1075 SITE 1 DC7 7 GLY A 622 VAL A 654 ASP A 655 LYS A 679 SITE 2 DC7 7 VAL A 680 LEU A 681 GOL A 782 SITE 1 DC8 2 ASP A 98 LYS A 99 SITE 1 DC9 3 GLN A 494 PRO A 495 HOH A1436 SITE 1 EC1 6 SER A 228 TYR A 229 PRO A 667 GLU A 668 SITE 2 EC1 6 HOH A 808 HOH A1259 SITE 1 EC2 2 LYS A 441 GLU A 580 CRYST1 43.066 124.850 67.880 90.00 97.29 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023220 0.000000 0.002971 0.00000 SCALE2 0.000000 0.008010 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014852 0.00000