HEADER TRANSFERASE 09-NOV-10 3AQK TITLE STRUCTURE OF BACTERIAL PROTEIN (APO FORM I) COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLY(A) POLYMERASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 18-431; COMPND 5 EC: 2.7.7.19; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 536056; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: ECDH1_3459; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS TRANSFERASE/RNA, ATP-BINDING, NUCLEOTIDE-BINDING, RNA-BINDING, KEYWDS 2 TRANSFERASE, NUCLEOTIDYLTRANSFERASE, ATP BINDING, A-PHOSPHORYLATION EXPDTA X-RAY DIFFRACTION AUTHOR Y.TOH,D.TAKESHITA,K.TOMITA REVDAT 3 13-MAR-24 3AQK 1 SEQADV REVDAT 2 31-JUL-13 3AQK 1 JRNL VERSN REVDAT 1 09-FEB-11 3AQK 0 JRNL AUTH Y.TOH,D.TAKESHITA,T.NAGAIKE,T.NUMATA,K.TOMITA JRNL TITL MECHANISM FOR THE ALTERATION OF THE SUBSTRATE SPECIFICITIES JRNL TITL 2 OF TEMPLATE-INDEPENDENT RNA POLYMERASES JRNL REF STRUCTURE V. 19 232 2011 JRNL REFN ISSN 0969-2126 JRNL PMID 21300291 JRNL DOI 10.1016/J.STR.2010.12.006 REMARK 2 REMARK 2 RESOLUTION. 3.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.3 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.97 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 122746.690 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 8777 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.279 REMARK 3 FREE R VALUE : 0.295 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 452 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.014 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.88 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1318 REMARK 3 BIN R VALUE (WORKING SET) : 0.4600 REMARK 3 BIN FREE R VALUE : 0.4680 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 73 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.055 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3185 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 144.7 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 22.10000 REMARK 3 B22 (A**2) : 22.10000 REMARK 3 B33 (A**2) : -44.20000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.63 REMARK 3 ESD FROM SIGMAA (A) : 1.29 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.65 REMARK 3 ESD FROM C-V SIGMAA (A) : 1.42 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.013 REMARK 3 BOND ANGLES (DEGREES) : 2.000 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.650 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.230 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.230 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.570 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.720 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.30 REMARK 3 BSOL : 100.1 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : CARBOHYDRATE.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 3AQK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-NOV-10. REMARK 100 THE DEPOSITION ID IS D_1000029571. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9790, 0.97928, 0.98317 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15761 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.650 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09000 REMARK 200 FOR THE DATA SET : 14.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.32600 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM TRIS-CL, 0.5M SODIUM CHLORIDE, REMARK 280 5MM MGCL2, 10% (W/V) POLYETHYLENE GLYCOL, PH 8.4, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.87967 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 99.75933 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 49.87967 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 99.75933 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 49.87967 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 99.75933 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 49.87967 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 99.75933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 114 REMARK 465 HIS A 115 REMARK 465 HIS A 116 REMARK 465 GLU A 117 REMARK 465 GLY A 118 REMARK 465 ASN A 119 REMARK 465 VAL A 120 REMARK 465 SER A 121 REMARK 465 ASP A 122 REMARK 465 ARG A 123 REMARK 465 THR A 124 REMARK 465 THR A 125 REMARK 465 SER A 126 REMARK 465 GLN A 127 REMARK 465 ARG A 128 REMARK 465 GLY A 129 REMARK 465 GLN A 130 REMARK 465 ASN A 131 REMARK 465 GLY A 132 REMARK 465 MET A 133 REMARK 465 LEU A 134 REMARK 465 LEU A 135 REMARK 465 ARG A 136 REMARK 465 ASP A 137 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 35 N - CA - C ANGL. DEV. = 17.8 DEGREES REMARK 500 PRO A 279 N - CA - C ANGL. DEV. = -19.0 DEGREES REMARK 500 PRO A 420 C - N - CD ANGL. DEV. = -19.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 20 155.30 177.87 REMARK 500 ARG A 23 -89.91 2.27 REMARK 500 ALA A 27 112.66 -22.81 REMARK 500 ILE A 28 88.43 -30.58 REMARK 500 ARG A 30 113.11 67.36 REMARK 500 GLU A 35 -157.35 -83.03 REMARK 500 PRO A 78 0.50 -48.74 REMARK 500 PHE A 85 48.70 -99.09 REMARK 500 ARG A 89 59.57 -59.56 REMARK 500 ARG A 94 156.83 107.17 REMARK 500 ARG A 96 -126.58 48.51 REMARK 500 LEU A 97 59.45 25.98 REMARK 500 ARG A 190 -15.81 -46.22 REMARK 500 ALA A 224 -86.24 -3.30 REMARK 500 THR A 225 -39.28 -27.93 REMARK 500 LEU A 226 -35.30 -35.92 REMARK 500 ASN A 228 -37.70 -24.47 REMARK 500 SER A 239 -60.09 -90.93 REMARK 500 LYS A 241 -35.85 -33.76 REMARK 500 LEU A 242 -73.99 -70.20 REMARK 500 GLN A 244 35.66 -77.75 REMARK 500 GLN A 262 -62.72 -29.56 REMARK 500 PHE A 265 66.35 -117.41 REMARK 500 THR A 269 -35.63 -37.19 REMARK 500 ASP A 298 64.47 -9.00 REMARK 500 TRP A 312 -74.15 -32.12 REMARK 500 GLU A 325 -2.32 -58.48 REMARK 500 LEU A 328 148.65 -176.06 REMARK 500 ALA A 335 -52.81 -28.13 REMARK 500 LEU A 349 112.65 -168.83 REMARK 500 GLN A 364 -23.48 -34.11 REMARK 500 ARG A 372 107.47 -42.94 REMARK 500 LYS A 375 5.65 -156.73 REMARK 500 HIS A 383 122.15 -28.55 REMARK 500 GLU A 404 13.60 -68.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 252 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3AQL RELATED DB: PDB REMARK 900 RELATED ID: 3AQM RELATED DB: PDB REMARK 900 RELATED ID: 3AQN RELATED DB: PDB DBREF 3AQK A 18 431 UNP C9QS13 C9QS13_ECOD1 18 431 SEQADV 3AQK HIS A 234 UNP C9QS13 ARG 234 ENGINEERED MUTATION SEQRES 1 A 414 VAL THR VAL ILE PRO ARG GLU GLN HIS ALA ILE SER ARG SEQRES 2 A 414 LYS ASP ILE SER GLU ASN ALA LEU LYS VAL MET TYR ARG SEQRES 3 A 414 LEU ASN LYS ALA GLY TYR GLU ALA TRP LEU VAL GLY GLY SEQRES 4 A 414 GLY VAL ARG ASP LEU LEU LEU GLY LYS LYS PRO LYS ASP SEQRES 5 A 414 PHE ASP VAL THR THR ASN ALA THR PRO GLU GLN VAL ARG SEQRES 6 A 414 LYS LEU PHE ARG ASN CYS ARG LEU VAL GLY ARG ARG PHE SEQRES 7 A 414 ARG LEU ALA HIS VAL MET PHE GLY PRO GLU ILE ILE GLU SEQRES 8 A 414 VAL ALA THR PHE ARG GLY HIS HIS GLU GLY ASN VAL SER SEQRES 9 A 414 ASP ARG THR THR SER GLN ARG GLY GLN ASN GLY MET LEU SEQRES 10 A 414 LEU ARG ASP ASN ILE PHE GLY SER ILE GLU GLU ASP ALA SEQRES 11 A 414 GLN ARG ARG ASP PHE THR ILE ASN SER LEU TYR TYR SER SEQRES 12 A 414 VAL ALA ASP PHE THR VAL ARG ASP TYR VAL GLY GLY MET SEQRES 13 A 414 LYS ASP LEU LYS ASP GLY VAL ILE ARG LEU ILE GLY ASN SEQRES 14 A 414 PRO GLU THR ARG TYR ARG GLU ASP PRO VAL ARG MET LEU SEQRES 15 A 414 ARG ALA VAL ARG PHE ALA ALA LYS LEU GLY MET ARG ILE SEQRES 16 A 414 SER PRO GLU THR ALA GLU PRO ILE PRO ARG LEU ALA THR SEQRES 17 A 414 LEU LEU ASN ASP ILE PRO PRO ALA HIS LEU PHE GLU GLU SEQRES 18 A 414 SER LEU LYS LEU LEU GLN ALA GLY TYR GLY TYR GLU THR SEQRES 19 A 414 TYR LYS LEU LEU CYS GLU TYR HIS LEU PHE GLN PRO LEU SEQRES 20 A 414 PHE PRO THR ILE THR ARG TYR PHE THR GLU ASN GLY ASP SEQRES 21 A 414 SER PRO MET GLU ARG ILE ILE GLU GLN VAL LEU LYS ASN SEQRES 22 A 414 THR ASP THR ARG ILE HIS ASN ASP MET ARG VAL ASN PRO SEQRES 23 A 414 ALA PHE LEU PHE ALA ALA MET PHE TRP TYR PRO LEU LEU SEQRES 24 A 414 GLU THR ALA GLN LYS ILE ALA GLN GLU SER GLY LEU THR SEQRES 25 A 414 TYR HIS ASP ALA PHE ALA LEU ALA MET ASN ASP VAL LEU SEQRES 26 A 414 ASP GLU ALA CYS ARG SER LEU ALA ILE PRO LYS ARG LEU SEQRES 27 A 414 THR THR LEU THR ARG ASP ILE TRP GLN LEU GLN LEU ARG SEQRES 28 A 414 MET SER ARG ARG GLN GLY LYS ARG ALA TRP LYS LEU LEU SEQRES 29 A 414 GLU HIS PRO LYS PHE ARG ALA ALA TYR ASP LEU LEU ALA SEQRES 30 A 414 LEU ARG ALA GLU VAL GLU ARG ASN ALA GLU LEU GLN ARG SEQRES 31 A 414 LEU VAL LYS TRP TRP GLY GLU PHE GLN VAL SER ALA PRO SEQRES 32 A 414 PRO ASP GLN LYS GLY MET LEU ASN GLU LEU ASP HELIX 1 1 PRO A 22 HIS A 26 5 5 HELIX 2 2 ARG A 30 GLU A 35 5 6 HELIX 3 3 ASN A 36 GLY A 48 1 13 HELIX 4 4 GLY A 57 GLY A 64 1 8 HELIX 5 5 GLU A 79 PHE A 85 1 7 HELIX 6 6 SER A 142 GLN A 148 1 7 HELIX 7 7 PHE A 152 SER A 156 5 5 HELIX 8 8 GLY A 171 ASP A 178 1 8 HELIX 9 9 ASN A 186 ASP A 194 1 9 HELIX 10 10 PRO A 195 LEU A 208 1 14 HELIX 11 11 SER A 213 GLU A 218 1 6 HELIX 12 12 GLU A 218 ALA A 224 1 7 HELIX 13 13 THR A 225 ILE A 230 5 6 HELIX 14 14 PRO A 231 GLN A 244 1 14 HELIX 15 15 TYR A 247 TYR A 258 1 12 HELIX 16 16 LEU A 260 PHE A 265 1 6 HELIX 17 17 PHE A 265 ARG A 270 1 6 HELIX 18 18 SER A 278 ASN A 297 1 20 HELIX 19 19 ASN A 302 SER A 326 1 25 HELIX 20 20 THR A 329 LEU A 349 1 21 HELIX 21 21 PRO A 352 LEU A 367 1 16 HELIX 22 22 ARG A 376 HIS A 383 1 8 HELIX 23 23 LYS A 385 GLU A 400 1 16 HELIX 24 24 ASN A 402 SER A 418 1 17 HELIX 25 25 ALA A 419 ASP A 431 1 13 SHEET 1 A 4 ALA A 51 LEU A 53 0 SHEET 2 A 4 VAL A 72 THR A 74 -1 O THR A 73 N TRP A 52 SHEET 3 A 4 ILE A 106 THR A 111 1 O GLU A 108 N VAL A 72 SHEET 4 A 4 ALA A 98 MET A 101 -1 N ALA A 98 O VAL A 109 CRYST1 130.848 130.848 149.639 90.00 90.00 120.00 P 64 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007642 0.004412 0.000000 0.00000 SCALE2 0.000000 0.008825 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006683 0.00000