HEADER TRANSFERASE 13-JAN-11 3ATS TITLE CRYSTAL STRUCTURE OF RV3168 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 22-378; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: MT3257, RV3168; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: B834; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS HYPOTHETICAL PROTEIN, PUTATIVE AMINOGLYCOSIDE PHOSPHORTRANSFERASE, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.-G.KIM,S.KIM,C.M.T.NGUYEN,K.-J.KIM REVDAT 4 13-MAR-24 3ATS 1 REMARK LINK REVDAT 3 11-OCT-17 3ATS 1 REMARK REVDAT 2 19-JUN-13 3ATS 1 JRNL REVDAT 1 03-AUG-11 3ATS 0 JRNL AUTH S.KIM,C.M.T.NGUYEN,E.-J.KIM,K.-J.KIM JRNL TITL CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS RV3168: A JRNL TITL 2 PUTATIVE AMINOGLYCOSIDE ANTIBIOTICS RESISTANCE ENZYME JRNL REF PROTEINS V. 79 2983 2011 JRNL REFN ISSN 0887-3585 JRNL PMID 21905120 JRNL DOI 10.1002/PROT.23119 REMARK 2 REMARK 2 RESOLUTION. 1.67 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0110 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.67 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.61 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 40527 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2148 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.67 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.71 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2683 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.54 REMARK 3 BIN R VALUE (WORKING SET) : 0.2830 REMARK 3 BIN FREE R VALUE SET COUNT : 134 REMARK 3 BIN FREE R VALUE : 0.3260 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2812 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 326 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.59000 REMARK 3 B22 (A**2) : -0.48000 REMARK 3 B33 (A**2) : -1.11000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.109 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.111 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.079 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.394 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2902 ; 0.023 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3967 ; 1.747 ; 1.936 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 350 ; 5.582 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 141 ;33.415 ;22.979 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 432 ;14.912 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;20.500 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 433 ; 0.130 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2266 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1756 ; 1.180 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2842 ; 2.058 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1146 ; 3.330 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1125 ; 5.038 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3ATS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-JAN-11. REMARK 100 THE DEPOSITION ID IS D_1000029684. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : PAL/PLS; PAL/PLS REMARK 200 BEAMLINE : 6C1; 6C1 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.23985; 0.97950 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210; ADSC QUANTUM REMARK 200 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46207 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.670 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3000, CA(OAC)2, PH 7.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.36900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.80700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.18300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.80700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.36900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.18300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 191 REMARK 465 GLY A 192 REMARK 465 ARG A 193 REMARK 465 THR A 194 REMARK 465 SER A 195 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 MET A 336 SD MET A 336 CE -0.366 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 270 CG - SD - CE ANGL. DEV. = -14.0 DEGREES REMARK 500 ASP A 279 CB - CG - OD1 ANGL. DEV. = 6.7 DEGREES REMARK 500 MET A 306 CB - CG - SD ANGL. DEV. = 19.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 87 71.82 53.74 REMARK 500 PHE A 186 39.23 -99.11 REMARK 500 ILE A 217 -9.43 -146.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 1 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 57 OE2 REMARK 620 2 GLU A 57 OE1 56.6 REMARK 620 3 ASP A 267 OD1 110.9 93.2 REMARK 620 4 ASP A 267 OD2 145.0 93.0 48.4 REMARK 620 5 GLU A 269 OE1 98.7 78.9 138.3 90.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 2 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 254 OD1 REMARK 620 2 ASP A 267 OD1 80.0 REMARK 620 3 HOH A 602 O 68.9 140.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 380 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 106 O REMARK 620 2 THR A 109 O 84.5 REMARK 620 3 HOH A 416 O 88.3 74.2 REMARK 620 4 HOH A 665 O 80.2 120.9 159.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 379 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 375 O REMARK 620 2 GLU A 377 OE2 80.3 REMARK 620 3 GLU A 377 OE1 105.6 53.9 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 379 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 380 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 381 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ATT RELATED DB: PDB DBREF 3ATS A 22 378 UNP O53318 O53318_MYCTU 22 378 SEQRES 1 A 357 THR LEU PRO ALA VAL ILE SER ARG TRP LEU SER SER VAL SEQRES 2 A 357 LEU PRO GLY GLY ALA ALA PRO GLU VAL THR VAL GLU SER SEQRES 3 A 357 GLY VAL ASP SER THR GLY MET SER SER GLU THR ILE ILE SEQRES 4 A 357 LEU THR ALA ARG TRP GLN GLN ASP GLY ARG SER ILE GLN SEQRES 5 A 357 GLN LYS LEU VAL ALA ARG VAL ALA PRO ALA ALA GLU ASP SEQRES 6 A 357 VAL PRO VAL PHE PRO THR TYR ARG LEU ASP HIS GLN PHE SEQRES 7 A 357 GLU VAL ILE ARG LEU VAL GLY GLU LEU THR ASP VAL PRO SEQRES 8 A 357 VAL PRO ARG VAL ARG TRP ILE GLU THR THR GLY ASP VAL SEQRES 9 A 357 LEU GLY THR PRO PHE PHE LEU MET ASP TYR VAL GLU GLY SEQRES 10 A 357 VAL VAL PRO PRO ASP VAL MET PRO TYR THR PHE GLY ASP SEQRES 11 A 357 ASN TRP PHE ALA ASP ALA PRO ALA GLU ARG GLN ARG GLN SEQRES 12 A 357 LEU GLN ASP ALA THR VAL ALA ALA LEU ALA THR LEU HIS SEQRES 13 A 357 SER ILE PRO ASN ALA GLN ASN THR PHE SER PHE LEU THR SEQRES 14 A 357 GLN GLY ARG THR SER ASP THR THR LEU HIS ARG HIS PHE SEQRES 15 A 357 ASN TRP VAL ARG SER TRP TYR ASP PHE ALA VAL GLU GLY SEQRES 16 A 357 ILE GLY ARG SER PRO LEU LEU GLU ARG THR PHE GLU TRP SEQRES 17 A 357 LEU GLN SER HIS TRP PRO ASP ASP ALA ALA ALA ARG GLU SEQRES 18 A 357 PRO VAL LEU LEU TRP GLY ASP ALA ARG VAL GLY ASN VAL SEQRES 19 A 357 LEU TYR ARG ASP PHE GLN PRO VAL ALA VAL LEU ASP TRP SEQRES 20 A 357 GLU MET VAL ALA LEU GLY PRO ARG GLU LEU ASP VAL ALA SEQRES 21 A 357 TRP MET ILE PHE ALA HIS ARG VAL PHE GLN GLU LEU ALA SEQRES 22 A 357 GLY LEU ALA THR LEU PRO GLY LEU PRO GLU VAL MET ARG SEQRES 23 A 357 GLU ASP ASP VAL ARG ALA THR TYR GLN ALA LEU THR GLY SEQRES 24 A 357 VAL GLU LEU GLY ASP LEU HIS TRP PHE TYR VAL TYR SER SEQRES 25 A 357 GLY VAL MET TRP ALA CYS VAL PHE MET ARG THR GLY ALA SEQRES 26 A 357 ARG ARG VAL HIS PHE GLY GLU ILE GLU LYS PRO ASP ASP SEQRES 27 A 357 VAL GLU SER LEU PHE TYR HIS ALA GLY LEU MET LYS HIS SEQRES 28 A 357 LEU LEU GLY GLU GLU HIS HET MG A 1 1 HET MG A 2 1 HET CA A 379 1 HET CA A 380 1 HET GOL A 381 6 HETNAM MG MAGNESIUM ION HETNAM CA CALCIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 MG 2(MG 2+) FORMUL 4 CA 2(CA 2+) FORMUL 6 GOL C3 H8 O3 FORMUL 7 HOH *326(H2 O) HELIX 1 1 THR A 22 LEU A 35 1 14 HELIX 2 2 ALA A 83 VAL A 87 5 5 HELIX 3 3 ARG A 94 THR A 109 1 16 HELIX 4 4 PRO A 146 GLY A 150 5 5 HELIX 5 5 PRO A 158 HIS A 177 1 20 HELIX 6 6 ASN A 181 PHE A 186 1 6 HELIX 7 7 SER A 187 THR A 190 5 4 HELIX 8 8 THR A 197 GLY A 218 1 22 HELIX 9 9 SER A 220 HIS A 233 1 14 HELIX 10 10 PRO A 235 ARG A 241 1 7 HELIX 11 11 ARG A 251 GLY A 253 5 3 HELIX 12 12 ASP A 267 VAL A 271 5 5 HELIX 13 13 ARG A 276 ALA A 297 1 22 HELIX 14 14 ARG A 307 GLY A 320 1 14 HELIX 15 15 LEU A 326 PHE A 351 1 26 HELIX 16 16 ASP A 359 PHE A 364 5 6 HELIX 17 17 HIS A 366 GLY A 375 1 10 SHEET 1 A 5 GLU A 42 VAL A 49 0 SHEET 2 A 5 SER A 55 GLN A 67 -1 O THR A 62 N THR A 44 SHEET 3 A 5 ARG A 70 VAL A 80 -1 O LEU A 76 N LEU A 61 SHEET 4 A 5 PHE A 130 ASP A 134 -1 O MET A 133 N VAL A 77 SHEET 5 A 5 VAL A 116 GLU A 120 -1 N TRP A 118 O LEU A 132 SHEET 1 B 2 VAL A 244 LEU A 246 0 SHEET 2 B 2 ALA A 272 GLY A 274 -1 O ALA A 272 N LEU A 246 SHEET 1 C 2 VAL A 255 ARG A 258 0 SHEET 2 C 2 GLN A 261 VAL A 265 -1 O ALA A 264 N LEU A 256 LINK MG MG A 1 OE2 GLU A 57 1555 1555 2.30 LINK MG MG A 1 OE1 GLU A 57 1555 1555 2.37 LINK MG MG A 1 OD1 ASP A 267 1555 1555 2.29 LINK MG MG A 1 OD2 ASP A 267 1555 1555 2.77 LINK MG MG A 1 OE1 GLU A 269 1555 1555 2.29 LINK MG MG A 2 OD1 ASN A 254 1555 1555 2.72 LINK MG MG A 2 OD1 ASP A 267 1555 1555 2.56 LINK MG MG A 2 O HOH A 602 1555 1555 2.84 LINK O GLY A 106 CA CA A 380 1555 1555 2.35 LINK O THR A 109 CA CA A 380 1555 1555 2.47 LINK O GLY A 375 CA CA A 379 1555 1555 2.31 LINK OE2 GLU A 377 CA CA A 379 1555 1555 2.46 LINK OE1 GLU A 377 CA CA A 379 1555 1555 2.49 LINK CA CA A 380 O HOH A 416 1555 1555 2.46 LINK CA CA A 380 O HOH A 665 1555 1555 2.58 CISPEP 1 VAL A 144 MET A 145 0 -13.95 SITE 1 AC1 4 MG A 2 GLU A 57 ASP A 267 GLU A 269 SITE 1 AC2 6 MG A 1 ASP A 249 ARG A 251 ASN A 254 SITE 2 AC2 6 ASP A 267 HOH A 602 SITE 1 AC3 6 GLN A 74 GLY A 375 GLU A 377 HOH A 400 SITE 2 AC3 6 HOH A 426 HOH A 437 SITE 1 AC4 4 GLY A 106 THR A 109 HOH A 416 HOH A 665 SITE 1 AC5 11 PHE A 90 THR A 92 TYR A 93 ARG A 94 SITE 2 AC5 11 GLN A 98 TRP A 205 GLU A 269 HOH A 454 SITE 3 AC5 11 HOH A 628 HOH A 648 HOH A 661 CRYST1 56.738 62.366 103.614 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017625 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016034 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009651 0.00000