data_3AU1 # _entry.id 3AU1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3AU1 pdb_00003au1 10.2210/pdb3au1/pdb RCSB RCSB029693 ? ? WWPDB D_1000029693 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3AU1 _pdbx_database_status.recvd_initial_deposition_date 2011-01-28 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Roisman, L.C.' 1 'Rossjohn, J.' 2 # _citation.id primary _citation.title 'A molecular basis for NKT cell recognition of CD1d-self-antigen' _citation.journal_abbrev Immunity _citation.journal_volume 34 _citation.page_first 315 _citation.page_last 326 _citation.year 2011 _citation.journal_id_ASTM IUNIEH _citation.country US _citation.journal_id_ISSN 1074-7613 _citation.journal_id_CSD 2048 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21376640 _citation.pdbx_database_id_DOI 10.1016/j.immuni.2011.01.013 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mallevaey, T.' 1 ? primary 'Clarke, A.J.' 2 ? primary 'Scott-Browne, J.P.' 3 ? primary 'Young, M.H.' 4 ? primary 'Roisman, L.C.' 5 ? primary 'Pellicci, D.G.' 6 ? primary 'Patel, O.' 7 ? primary 'Vivian, J.P.' 8 ? primary 'Matsuda, J.L.' 9 ? primary 'McCluskey, J.' 10 ? primary 'Godfrey, D.I.' 11 ? primary 'Marrack, P.' 12 ? primary 'Rossjohn, J.' 13 ? primary 'Gapin, L.' 14 ? # _cell.entry_id 3AU1 _cell.length_a 41.656 _cell.length_b 98.447 _cell.length_c 55.486 _cell.angle_alpha 90.00 _cell.angle_beta 106.68 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3AU1 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Antigen-presenting glycoprotein CD1d1' 34662.012 1 ? ? 'extracellular domain' ? 2 polymer man Beta-2-microglobulin 11660.350 1 ? ? ? ? 3 branched man ;alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 910.823 1 ? ? ? ? 4 branched man ;alpha-D-mannopyranose-(1-3)-[beta-D-mannopyranose-(1-6)]alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose ; 1056.964 1 ? ? ? ? 5 branched man 'beta-D-galactopyranose-(1-4)-beta-D-glucopyranose' 342.297 1 ? ? ? ? 6 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 7 non-polymer syn '(7Z,15E,17E)-N-[(2S,3S,4E)-1,3-dihydroxyoctadec-4-en-2-yl]tricosa-7,15,17-trienamide' 630.039 1 ? ? ? ? 8 water nat water 18.015 77 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 CD1d 5 beta-lactose # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;SEAQQKNYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKLQHMFQVYRVSFTRD IQELVKMMSPKEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGTSATV QMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSSAHGHRQLVCHVSGFYPKPVWVMWMRGDQEQQGTHRGDFLPN ADETWYLQATLDVEAGEEAGLACRVKHSSLGGQDIILYWGSLHHILDAQKMVWNHRHHHHHH ; ;SEAQQKNYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKLQHMFQVYRVSFTRD IQELVKMMSPKEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGTSATV QMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSSAHGHRQLVCHVSGFYPKPVWVMWMRGDQEQQGTHRGDFLPN ADETWYLQATLDVEAGEEAGLACRVKHSSLGGQDIILYWGSLHHILDAQKMVWNHRHHHHHH ; A ? 2 'polypeptide(L)' no no ;IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYAC RVKHASMAEPKTVYWDRDM ; ;IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYAC RVKHASMAEPKTVYWDRDM ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLU n 1 3 ALA n 1 4 GLN n 1 5 GLN n 1 6 LYS n 1 7 ASN n 1 8 TYR n 1 9 THR n 1 10 PHE n 1 11 ARG n 1 12 CYS n 1 13 LEU n 1 14 GLN n 1 15 MET n 1 16 SER n 1 17 SER n 1 18 PHE n 1 19 ALA n 1 20 ASN n 1 21 ARG n 1 22 SER n 1 23 TRP n 1 24 SER n 1 25 ARG n 1 26 THR n 1 27 ASP n 1 28 SER n 1 29 VAL n 1 30 VAL n 1 31 TRP n 1 32 LEU n 1 33 GLY n 1 34 ASP n 1 35 LEU n 1 36 GLN n 1 37 THR n 1 38 HIS n 1 39 ARG n 1 40 TRP n 1 41 SER n 1 42 ASN n 1 43 ASP n 1 44 SER n 1 45 ALA n 1 46 THR n 1 47 ILE n 1 48 SER n 1 49 PHE n 1 50 THR n 1 51 LYS n 1 52 PRO n 1 53 TRP n 1 54 SER n 1 55 GLN n 1 56 GLY n 1 57 LYS n 1 58 LEU n 1 59 SER n 1 60 ASN n 1 61 GLN n 1 62 GLN n 1 63 TRP n 1 64 GLU n 1 65 LYS n 1 66 LEU n 1 67 GLN n 1 68 HIS n 1 69 MET n 1 70 PHE n 1 71 GLN n 1 72 VAL n 1 73 TYR n 1 74 ARG n 1 75 VAL n 1 76 SER n 1 77 PHE n 1 78 THR n 1 79 ARG n 1 80 ASP n 1 81 ILE n 1 82 GLN n 1 83 GLU n 1 84 LEU n 1 85 VAL n 1 86 LYS n 1 87 MET n 1 88 MET n 1 89 SER n 1 90 PRO n 1 91 LYS n 1 92 GLU n 1 93 ASP n 1 94 TYR n 1 95 PRO n 1 96 ILE n 1 97 GLU n 1 98 ILE n 1 99 GLN n 1 100 LEU n 1 101 SER n 1 102 ALA n 1 103 GLY n 1 104 CYS n 1 105 GLU n 1 106 MET n 1 107 TYR n 1 108 PRO n 1 109 GLY n 1 110 ASN n 1 111 ALA n 1 112 SER n 1 113 GLU n 1 114 SER n 1 115 PHE n 1 116 LEU n 1 117 HIS n 1 118 VAL n 1 119 ALA n 1 120 PHE n 1 121 GLN n 1 122 GLY n 1 123 LYS n 1 124 TYR n 1 125 VAL n 1 126 VAL n 1 127 ARG n 1 128 PHE n 1 129 TRP n 1 130 GLY n 1 131 THR n 1 132 SER n 1 133 TRP n 1 134 GLN n 1 135 THR n 1 136 VAL n 1 137 PRO n 1 138 GLY n 1 139 ALA n 1 140 PRO n 1 141 SER n 1 142 TRP n 1 143 LEU n 1 144 ASP n 1 145 LEU n 1 146 PRO n 1 147 ILE n 1 148 LYS n 1 149 VAL n 1 150 LEU n 1 151 ASN n 1 152 ALA n 1 153 ASP n 1 154 GLN n 1 155 GLY n 1 156 THR n 1 157 SER n 1 158 ALA n 1 159 THR n 1 160 VAL n 1 161 GLN n 1 162 MET n 1 163 LEU n 1 164 LEU n 1 165 ASN n 1 166 ASP n 1 167 THR n 1 168 CYS n 1 169 PRO n 1 170 LEU n 1 171 PHE n 1 172 VAL n 1 173 ARG n 1 174 GLY n 1 175 LEU n 1 176 LEU n 1 177 GLU n 1 178 ALA n 1 179 GLY n 1 180 LYS n 1 181 SER n 1 182 ASP n 1 183 LEU n 1 184 GLU n 1 185 LYS n 1 186 GLN n 1 187 GLU n 1 188 LYS n 1 189 PRO n 1 190 VAL n 1 191 ALA n 1 192 TRP n 1 193 LEU n 1 194 SER n 1 195 SER n 1 196 VAL n 1 197 PRO n 1 198 SER n 1 199 SER n 1 200 ALA n 1 201 HIS n 1 202 GLY n 1 203 HIS n 1 204 ARG n 1 205 GLN n 1 206 LEU n 1 207 VAL n 1 208 CYS n 1 209 HIS n 1 210 VAL n 1 211 SER n 1 212 GLY n 1 213 PHE n 1 214 TYR n 1 215 PRO n 1 216 LYS n 1 217 PRO n 1 218 VAL n 1 219 TRP n 1 220 VAL n 1 221 MET n 1 222 TRP n 1 223 MET n 1 224 ARG n 1 225 GLY n 1 226 ASP n 1 227 GLN n 1 228 GLU n 1 229 GLN n 1 230 GLN n 1 231 GLY n 1 232 THR n 1 233 HIS n 1 234 ARG n 1 235 GLY n 1 236 ASP n 1 237 PHE n 1 238 LEU n 1 239 PRO n 1 240 ASN n 1 241 ALA n 1 242 ASP n 1 243 GLU n 1 244 THR n 1 245 TRP n 1 246 TYR n 1 247 LEU n 1 248 GLN n 1 249 ALA n 1 250 THR n 1 251 LEU n 1 252 ASP n 1 253 VAL n 1 254 GLU n 1 255 ALA n 1 256 GLY n 1 257 GLU n 1 258 GLU n 1 259 ALA n 1 260 GLY n 1 261 LEU n 1 262 ALA n 1 263 CYS n 1 264 ARG n 1 265 VAL n 1 266 LYS n 1 267 HIS n 1 268 SER n 1 269 SER n 1 270 LEU n 1 271 GLY n 1 272 GLY n 1 273 GLN n 1 274 ASP n 1 275 ILE n 1 276 ILE n 1 277 LEU n 1 278 TYR n 1 279 TRP n 1 280 GLY n 1 281 SER n 1 282 LEU n 1 283 HIS n 1 284 HIS n 1 285 ILE n 1 286 LEU n 1 287 ASP n 1 288 ALA n 1 289 GLN n 1 290 LYS n 1 291 MET n 1 292 VAL n 1 293 TRP n 1 294 ASN n 1 295 HIS n 1 296 ARG n 1 297 HIS n 1 298 HIS n 1 299 HIS n 1 300 HIS n 1 301 HIS n 1 302 HIS n 2 1 ILE n 2 2 GLN n 2 3 LYS n 2 4 THR n 2 5 PRO n 2 6 GLN n 2 7 ILE n 2 8 GLN n 2 9 VAL n 2 10 TYR n 2 11 SER n 2 12 ARG n 2 13 HIS n 2 14 PRO n 2 15 PRO n 2 16 GLU n 2 17 ASN n 2 18 GLY n 2 19 LYS n 2 20 PRO n 2 21 ASN n 2 22 ILE n 2 23 LEU n 2 24 ASN n 2 25 CYS n 2 26 TYR n 2 27 VAL n 2 28 THR n 2 29 GLN n 2 30 PHE n 2 31 HIS n 2 32 PRO n 2 33 PRO n 2 34 HIS n 2 35 ILE n 2 36 GLU n 2 37 ILE n 2 38 GLN n 2 39 MET n 2 40 LEU n 2 41 LYS n 2 42 ASN n 2 43 GLY n 2 44 LYS n 2 45 LYS n 2 46 ILE n 2 47 PRO n 2 48 LYS n 2 49 VAL n 2 50 GLU n 2 51 MET n 2 52 SER n 2 53 ASP n 2 54 MET n 2 55 SER n 2 56 PHE n 2 57 SER n 2 58 LYS n 2 59 ASP n 2 60 TRP n 2 61 SER n 2 62 PHE n 2 63 TYR n 2 64 ILE n 2 65 LEU n 2 66 ALA n 2 67 HIS n 2 68 THR n 2 69 GLU n 2 70 PHE n 2 71 THR n 2 72 PRO n 2 73 THR n 2 74 GLU n 2 75 THR n 2 76 ASP n 2 77 THR n 2 78 TYR n 2 79 ALA n 2 80 CYS n 2 81 ARG n 2 82 VAL n 2 83 LYS n 2 84 HIS n 2 85 ALA n 2 86 SER n 2 87 MET n 2 88 ALA n 2 89 GLU n 2 90 PRO n 2 91 LYS n 2 92 THR n 2 93 VAL n 2 94 TYR n 2 95 TRP n 2 96 ASP n 2 97 ARG n 2 98 ASP n 2 99 MET n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? mouse ? Cd1d1 ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? 'fall armyworm' 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? ? ? ? ? ? ? ? ? Baculovirus ? ? ? ? ? ? 2 1 sample ? ? ? mouse ? B2m ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? 'fall armyworm' 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? ? ? ? ? ? ? ? ? Baculovirus ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP CD1D1_MOUSE P11609 1 ;SEAQQKNYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKLQHMFQVYRVSFTRD IQELVKMMSPKEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGTSATV QMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSSADGHRQLVCHVSGFYPKPVWVMWMRGDQEQQGTHRGDFLPN ADETWYLQATLDVEAGEEAGLACRVKHSSLGGQDIILYW ; 19 ? 2 UNP B2MG_MOUSE P01887 2 ;IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYAC RVKHDSMAEPKTVYWDRDM ; 21 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3AU1 A 1 ? 279 ? P11609 19 ? 297 ? 1 279 2 2 3AU1 B 1 ? 99 ? P01887 21 ? 119 ? 1 99 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3AU1 HIS A 201 ? UNP P11609 ASP 219 'SEE REMARK 999' 201 1 1 3AU1 GLY A 280 ? UNP P11609 ? ? 'expression tag' 280 2 1 3AU1 SER A 281 ? UNP P11609 ? ? 'expression tag' 281 3 1 3AU1 LEU A 282 ? UNP P11609 ? ? 'expression tag' 282 4 1 3AU1 HIS A 283 ? UNP P11609 ? ? 'expression tag' 283 5 1 3AU1 HIS A 284 ? UNP P11609 ? ? 'expression tag' 284 6 1 3AU1 ILE A 285 ? UNP P11609 ? ? 'expression tag' 285 7 1 3AU1 LEU A 286 ? UNP P11609 ? ? 'expression tag' 286 8 1 3AU1 ASP A 287 ? UNP P11609 ? ? 'expression tag' 287 9 1 3AU1 ALA A 288 ? UNP P11609 ? ? 'expression tag' 288 10 1 3AU1 GLN A 289 ? UNP P11609 ? ? 'expression tag' 289 11 1 3AU1 LYS A 290 ? UNP P11609 ? ? 'expression tag' 290 12 1 3AU1 MET A 291 ? UNP P11609 ? ? 'expression tag' 291 13 1 3AU1 VAL A 292 ? UNP P11609 ? ? 'expression tag' 292 14 1 3AU1 TRP A 293 ? UNP P11609 ? ? 'expression tag' 293 15 1 3AU1 ASN A 294 ? UNP P11609 ? ? 'expression tag' 294 16 1 3AU1 HIS A 295 ? UNP P11609 ? ? 'expression tag' 295 17 1 3AU1 ARG A 296 ? UNP P11609 ? ? 'expression tag' 296 18 1 3AU1 HIS A 297 ? UNP P11609 ? ? 'expression tag' 297 19 1 3AU1 HIS A 298 ? UNP P11609 ? ? 'expression tag' 298 20 1 3AU1 HIS A 299 ? UNP P11609 ? ? 'expression tag' 299 21 1 3AU1 HIS A 300 ? UNP P11609 ? ? 'expression tag' 300 22 1 3AU1 HIS A 301 ? UNP P11609 ? ? 'expression tag' 301 23 1 3AU1 HIS A 302 ? UNP P11609 ? ? 'expression tag' 302 24 2 3AU1 ALA B 85 ? UNP P01887 ASP 105 'SEE REMARK 999' 85 25 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BGC 'D-saccharide, beta linking' . beta-D-glucopyranose 'beta-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 ERA non-polymer . '(7Z,15E,17E)-N-[(2S,3S,4E)-1,3-dihydroxyoctadec-4-en-2-yl]tricosa-7,15,17-trienamide' ? 'C41 H75 N O3' 630.039 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156 GLC 'D-saccharide, alpha linking' . alpha-D-glucopyranose 'alpha-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3AU1 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.35 _exptl_crystal.density_percent_sol 47.72 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pdbx_details '22% PEG 4000, 10% isopropanol, 0.1M sodium citrate, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2010-11-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'synchrotron radiation' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9537 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'AUSTRALIAN SYNCHROTRON BEAMLINE MX2' _diffrn_source.pdbx_synchrotron_site 'Australian Synchrotron' _diffrn_source.pdbx_synchrotron_beamline MX2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9537 # _reflns.entry_id 3AU1 _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F 1 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.5 _reflns.number_obs 14675 _reflns.number_all 14675 _reflns.percent_possible_obs 99.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 3AU1 _refine.ls_number_reflns_obs 13931 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 49.21 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 98.40 _refine.ls_R_factor_obs 0.19663 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19446 _refine.ls_R_factor_R_free 0.23815 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 738 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.951 _refine.correlation_coeff_Fo_to_Fc_free 0.936 _refine.B_iso_mean 54.644 _refine.aniso_B[1][1] -0.64 _refine.aniso_B[2][2] 0.62 _refine.aniso_B[3][3] 0.05 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.06 _refine.aniso_B[2][3] -0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB code 2GAZ' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.833 _refine.pdbx_overall_ESU_R_Free 0.292 _refine.overall_SU_ML 0.227 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 22.833 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2911 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 209 _refine_hist.number_atoms_solvent 77 _refine_hist.number_atoms_total 3197 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 49.21 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.009 0.021 ? 3225 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.576 2.003 ? 4401 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.620 5.000 ? 362 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.460 24.265 ? 136 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.750 15.000 ? 479 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14.775 15.000 ? 12 'X-RAY DIFFRACTION' ? r_chiral_restr 0.178 0.200 ? 501 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.021 ? 2366 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.345 1.500 ? 1828 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.682 2.000 ? 2954 'X-RAY DIFFRACTION' ? r_scbond_it 1.112 3.000 ? 1397 'X-RAY DIFFRACTION' ? r_scangle_it 1.805 4.500 ? 1447 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.500 _refine_ls_shell.d_res_low 2.564 _refine_ls_shell.number_reflns_R_work 896 _refine_ls_shell.R_factor_R_work 0.289 _refine_ls_shell.percent_reflns_obs 87.21 _refine_ls_shell.R_factor_R_free 0.441 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 52 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 3AU1 _struct.title 'Crystal structure of mouse CD1d in complex with ganglioside GD3' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3AU1 _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text ;immunoglobulin fold, antigen presenting molecule, T-cell receptor, cell surface protein with a single transmembrane domain, IMMUNE SYSTEM ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 8 ? I N N 8 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 59 ? SER A 89 ? SER A 59 SER A 89 1 ? 31 HELX_P HELX_P2 2 PRO A 140 ? TRP A 142 ? PRO A 140 TRP A 142 5 ? 3 HELX_P HELX_P3 3 LEU A 143 ? ALA A 152 ? LEU A 143 ALA A 152 1 ? 10 HELX_P HELX_P4 4 ASP A 153 ? ASP A 166 ? ASP A 153 ASP A 166 1 ? 14 HELX_P HELX_P5 5 ASP A 166 ? GLY A 179 ? ASP A 166 GLY A 179 1 ? 14 HELX_P HELX_P6 6 GLY A 179 ? GLU A 184 ? GLY A 179 GLU A 184 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 104 SG ? ? ? 1_555 A CYS 168 SG ? ? A CYS 104 A CYS 168 1_555 ? ? ? ? ? ? ? 2.093 ? ? disulf2 disulf ? ? A CYS 208 SG ? ? ? 1_555 A CYS 263 SG ? ? A CYS 208 A CYS 263 1_555 ? ? ? ? ? ? ? 2.050 ? ? disulf3 disulf ? ? B CYS 25 SG ? ? ? 1_555 B CYS 80 SG ? ? B CYS 25 B CYS 80 1_555 ? ? ? ? ? ? ? 2.035 ? ? covale1 covale one ? A ASN 20 ND2 ? ? ? 1_555 F NAG . C1 ? ? A ASN 20 A NAG 303 1_555 ? ? ? ? ? ? ? 1.456 ? N-Glycosylation covale2 covale one ? A ASN 42 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 42 C NAG 1 1_555 ? ? ? ? ? ? ? 1.465 ? N-Glycosylation covale3 covale one ? A ASN 165 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 165 D NAG 1 1_555 ? ? ? ? ? ? ? 1.459 ? N-Glycosylation covale4 covale one ? G ERA . OA ? ? ? 1_555 E BGC . C1 ? ? A ERA 315 E BGC 1 1_555 ? ? ? ? ? ? ? 1.483 ? ? covale5 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.440 ? ? covale6 covale both ? C NAG . O4 ? ? ? 1_555 C GLC . C1 ? ? C NAG 2 C GLC 3 1_555 ? ? ? ? ? ? ? 1.233 ? ? covale7 covale both ? C GLC . O3 ? ? ? 1_555 C MAN . C1 ? ? C GLC 3 C MAN 4 1_555 ? ? ? ? ? ? ? 1.434 ? ? covale8 covale both ? C MAN . O2 ? ? ? 1_555 C MAN . C1 ? ? C MAN 4 C MAN 5 1_555 ? ? ? ? ? ? ? 1.391 ? ? covale9 covale both ? D NAG . O4 ? ? ? 1_555 D NAG . C1 ? ? D NAG 1 D NAG 2 1_555 ? ? ? ? ? ? ? 1.463 ? ? covale10 covale both ? D NAG . O6 ? ? ? 1_555 D FUC . C1 ? ? D NAG 1 D FUC 6 1_555 ? ? ? ? ? ? ? 1.466 ? ? covale11 covale both ? D NAG . O4 ? ? ? 1_555 D GLC . C1 ? ? D NAG 2 D GLC 3 1_555 ? ? ? ? ? ? ? 1.366 ? ? covale12 covale both ? D GLC . O3 ? ? ? 1_555 D MAN . C1 ? ? D GLC 3 D MAN 4 1_555 ? ? ? ? ? ? ? 1.539 ? ? covale13 covale both ? D GLC . O6 ? ? ? 1_555 D BMA . C1 ? ? D GLC 3 D BMA 5 1_555 ? ? ? ? ? ? ? 1.262 ? ? covale14 covale both ? E BGC . O4 ? ? ? 1_555 E GAL . C1 ? ? E BGC 1 E GAL 2 1_555 ? ? ? ? ? ? ? 1.476 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 89 A . ? SER 89 A PRO 90 A ? PRO 90 A 1 -0.73 2 TYR 94 A . ? TYR 94 A PRO 95 A ? PRO 95 A 1 -1.08 3 TYR 214 A . ? TYR 214 A PRO 215 A ? PRO 215 A 1 -0.16 4 HIS 31 B . ? HIS 31 B PRO 32 B ? PRO 32 B 1 -1.29 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 4 ? C ? 4 ? D ? 4 ? E ? 4 ? F ? 4 ? G ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 48 ? PHE A 49 ? SER A 48 PHE A 49 A 2 LEU A 35 ? TRP A 40 ? LEU A 35 TRP A 40 A 3 TRP A 23 ? LEU A 32 ? TRP A 23 LEU A 32 A 4 TYR A 8 ? ASN A 20 ? TYR A 8 ASN A 20 A 5 ILE A 96 ? MET A 106 ? ILE A 96 MET A 106 A 6 SER A 112 ? PHE A 120 ? SER A 112 PHE A 120 A 7 LYS A 123 ? TRP A 129 ? LYS A 123 TRP A 129 A 8 SER A 132 ? THR A 135 ? SER A 132 THR A 135 B 1 VAL A 190 ? VAL A 196 ? VAL A 190 VAL A 196 B 2 GLN A 205 ? PHE A 213 ? GLN A 205 PHE A 213 B 3 TRP A 245 ? ASP A 252 ? TRP A 245 ASP A 252 B 4 HIS A 233 ? ARG A 234 ? HIS A 233 ARG A 234 C 1 VAL A 190 ? VAL A 196 ? VAL A 190 VAL A 196 C 2 GLN A 205 ? PHE A 213 ? GLN A 205 PHE A 213 C 3 TRP A 245 ? ASP A 252 ? TRP A 245 ASP A 252 C 4 LEU A 238 ? PRO A 239 ? LEU A 238 PRO A 239 D 1 GLN A 227 ? GLU A 228 ? GLN A 227 GLU A 228 D 2 VAL A 218 ? ARG A 224 ? VAL A 218 ARG A 224 D 3 LEU A 261 ? HIS A 267 ? LEU A 261 HIS A 267 D 4 ILE A 275 ? TYR A 278 ? ILE A 275 TYR A 278 E 1 GLN B 6 ? SER B 11 ? GLN B 6 SER B 11 E 2 ASN B 21 ? PHE B 30 ? ASN B 21 PHE B 30 E 3 PHE B 62 ? PHE B 70 ? PHE B 62 PHE B 70 E 4 GLU B 50 ? MET B 51 ? GLU B 50 MET B 51 F 1 GLN B 6 ? SER B 11 ? GLN B 6 SER B 11 F 2 ASN B 21 ? PHE B 30 ? ASN B 21 PHE B 30 F 3 PHE B 62 ? PHE B 70 ? PHE B 62 PHE B 70 F 4 SER B 55 ? PHE B 56 ? SER B 55 PHE B 56 G 1 LYS B 44 ? LYS B 45 ? LYS B 44 LYS B 45 G 2 GLU B 36 ? LYS B 41 ? GLU B 36 LYS B 41 G 3 TYR B 78 ? LYS B 83 ? TYR B 78 LYS B 83 G 4 LYS B 91 ? TYR B 94 ? LYS B 91 TYR B 94 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O SER A 48 ? O SER A 48 N ARG A 39 ? N ARG A 39 A 2 3 O THR A 37 ? O THR A 37 N VAL A 30 ? N VAL A 30 A 3 4 O VAL A 29 ? O VAL A 29 N LEU A 13 ? N LEU A 13 A 4 5 N CYS A 12 ? N CYS A 12 O ALA A 102 ? O ALA A 102 A 5 6 N SER A 101 ? N SER A 101 O HIS A 117 ? O HIS A 117 A 6 7 N VAL A 118 ? N VAL A 118 O VAL A 126 ? O VAL A 126 A 7 8 N TRP A 129 ? N TRP A 129 O SER A 132 ? O SER A 132 B 1 2 N TRP A 192 ? N TRP A 192 O HIS A 209 ? O HIS A 209 B 2 3 N VAL A 210 ? N VAL A 210 O LEU A 247 ? O LEU A 247 B 3 4 O THR A 250 ? O THR A 250 N HIS A 233 ? N HIS A 233 C 1 2 N TRP A 192 ? N TRP A 192 O HIS A 209 ? O HIS A 209 C 2 3 N VAL A 210 ? N VAL A 210 O LEU A 247 ? O LEU A 247 C 3 4 O TYR A 246 ? O TYR A 246 N LEU A 238 ? N LEU A 238 D 1 2 O GLN A 227 ? O GLN A 227 N ARG A 224 ? N ARG A 224 D 2 3 N MET A 223 ? N MET A 223 O ALA A 262 ? O ALA A 262 D 3 4 N VAL A 265 ? N VAL A 265 O ILE A 275 ? O ILE A 275 E 1 2 N TYR B 10 ? N TYR B 10 O ASN B 24 ? O ASN B 24 E 2 3 N LEU B 23 ? N LEU B 23 O THR B 68 ? O THR B 68 E 3 4 O HIS B 67 ? O HIS B 67 N GLU B 50 ? N GLU B 50 F 1 2 N TYR B 10 ? N TYR B 10 O ASN B 24 ? O ASN B 24 F 2 3 N LEU B 23 ? N LEU B 23 O THR B 68 ? O THR B 68 F 3 4 O TYR B 63 ? O TYR B 63 N SER B 55 ? N SER B 55 G 1 2 O LYS B 44 ? O LYS B 44 N LYS B 41 ? N LYS B 41 G 2 3 N GLN B 38 ? N GLN B 38 O ARG B 81 ? O ARG B 81 G 3 4 N VAL B 82 ? N VAL B 82 O LYS B 91 ? O LYS B 91 # _database_PDB_matrix.entry_id 3AU1 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3AU1 _atom_sites.fract_transf_matrix[1][1] 0.024006 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.007193 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010158 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018814 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 'MAN C 4 HAS WRONG CHIRALITY AT ATOM C1' 2 'MAN C 5 HAS WRONG CHIRALITY AT ATOM C1' 3 'GLC D 3 HAS WRONG CHIRALITY AT ATOM C1' 4 'ERA A 315 HAS WRONG CHIRALITY AT ATOM CAB' 5 'ERA A 315 HAS WRONG CHIRALITY AT ATOM CAC' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 ? ? ? A . n A 1 2 GLU 2 2 ? ? ? A . n A 1 3 ALA 3 3 ? ? ? A . n A 1 4 GLN 4 4 ? ? ? A . n A 1 5 GLN 5 5 ? ? ? A . n A 1 6 LYS 6 6 ? ? ? A . n A 1 7 ASN 7 7 7 ASN ASN A . n A 1 8 TYR 8 8 8 TYR TYR A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 PHE 10 10 10 PHE PHE A . n A 1 11 ARG 11 11 11 ARG ARG A . n A 1 12 CYS 12 12 12 CYS CYS A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 MET 15 15 15 MET MET A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 PHE 18 18 18 PHE PHE A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 ASN 20 20 20 ASN ASN A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 TRP 23 23 23 TRP TRP A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 TRP 31 31 31 TRP TRP A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 GLN 36 36 36 GLN GLN A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 HIS 38 38 38 HIS HIS A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 TRP 40 40 40 TRP TRP A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 ASN 42 42 42 ASN ASN A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 THR 46 46 46 THR THR A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 PRO 52 52 52 PRO PRO A . n A 1 53 TRP 53 53 53 TRP TRP A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 GLN 55 55 55 GLN GLN A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 GLN 62 62 62 GLN GLN A . n A 1 63 TRP 63 63 63 TRP TRP A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 GLN 67 67 67 GLN GLN A . n A 1 68 HIS 68 68 68 HIS HIS A . n A 1 69 MET 69 69 69 MET MET A . n A 1 70 PHE 70 70 70 PHE PHE A . n A 1 71 GLN 71 71 71 GLN GLN A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 TYR 73 73 73 TYR TYR A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 PHE 77 77 77 PHE PHE A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 ARG 79 79 79 ARG ARG A . n A 1 80 ASP 80 80 80 ASP ASP A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 GLN 82 82 82 GLN GLN A . n A 1 83 GLU 83 83 83 GLU GLU A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 VAL 85 85 85 VAL VAL A . n A 1 86 LYS 86 86 86 LYS LYS A . n A 1 87 MET 87 87 87 MET MET A . n A 1 88 MET 88 88 88 MET MET A . n A 1 89 SER 89 89 89 SER SER A . n A 1 90 PRO 90 90 90 PRO PRO A . n A 1 91 LYS 91 91 91 LYS LYS A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 ASP 93 93 93 ASP ASP A . n A 1 94 TYR 94 94 94 TYR TYR A . n A 1 95 PRO 95 95 95 PRO PRO A . n A 1 96 ILE 96 96 96 ILE ILE A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 GLN 99 99 99 GLN GLN A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 ALA 102 102 102 ALA ALA A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 CYS 104 104 104 CYS CYS A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 MET 106 106 106 MET MET A . n A 1 107 TYR 107 107 107 TYR TYR A . n A 1 108 PRO 108 108 108 PRO PRO A . n A 1 109 GLY 109 109 109 GLY GLY A . n A 1 110 ASN 110 110 110 ASN ASN A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 SER 112 112 112 SER SER A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 SER 114 114 114 SER SER A . n A 1 115 PHE 115 115 115 PHE PHE A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 HIS 117 117 117 HIS HIS A . n A 1 118 VAL 118 118 118 VAL VAL A . n A 1 119 ALA 119 119 119 ALA ALA A . n A 1 120 PHE 120 120 120 PHE PHE A . n A 1 121 GLN 121 121 121 GLN GLN A . n A 1 122 GLY 122 122 122 GLY GLY A . n A 1 123 LYS 123 123 123 LYS LYS A . n A 1 124 TYR 124 124 124 TYR TYR A . n A 1 125 VAL 125 125 125 VAL VAL A . n A 1 126 VAL 126 126 126 VAL VAL A . n A 1 127 ARG 127 127 127 ARG ARG A . n A 1 128 PHE 128 128 128 PHE PHE A . n A 1 129 TRP 129 129 129 TRP TRP A . n A 1 130 GLY 130 130 130 GLY GLY A . n A 1 131 THR 131 131 131 THR THR A . n A 1 132 SER 132 132 132 SER SER A . n A 1 133 TRP 133 133 133 TRP TRP A . n A 1 134 GLN 134 134 134 GLN GLN A . n A 1 135 THR 135 135 135 THR THR A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 PRO 137 137 137 PRO PRO A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 PRO 140 140 140 PRO PRO A . n A 1 141 SER 141 141 141 SER SER A . n A 1 142 TRP 142 142 142 TRP TRP A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 ASP 144 144 144 ASP ASP A . n A 1 145 LEU 145 145 145 LEU LEU A . n A 1 146 PRO 146 146 146 PRO PRO A . n A 1 147 ILE 147 147 147 ILE ILE A . n A 1 148 LYS 148 148 148 LYS LYS A . n A 1 149 VAL 149 149 149 VAL VAL A . n A 1 150 LEU 150 150 150 LEU LEU A . n A 1 151 ASN 151 151 151 ASN ASN A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 ASP 153 153 153 ASP ASP A . n A 1 154 GLN 154 154 154 GLN GLN A . n A 1 155 GLY 155 155 155 GLY GLY A . n A 1 156 THR 156 156 156 THR THR A . n A 1 157 SER 157 157 157 SER SER A . n A 1 158 ALA 158 158 158 ALA ALA A . n A 1 159 THR 159 159 159 THR THR A . n A 1 160 VAL 160 160 160 VAL VAL A . n A 1 161 GLN 161 161 161 GLN GLN A . n A 1 162 MET 162 162 162 MET MET A . n A 1 163 LEU 163 163 163 LEU LEU A . n A 1 164 LEU 164 164 164 LEU LEU A . n A 1 165 ASN 165 165 165 ASN ASN A . n A 1 166 ASP 166 166 166 ASP ASP A . n A 1 167 THR 167 167 167 THR THR A . n A 1 168 CYS 168 168 168 CYS CYS A . n A 1 169 PRO 169 169 169 PRO PRO A . n A 1 170 LEU 170 170 170 LEU LEU A . n A 1 171 PHE 171 171 171 PHE PHE A . n A 1 172 VAL 172 172 172 VAL VAL A . n A 1 173 ARG 173 173 173 ARG ARG A . n A 1 174 GLY 174 174 174 GLY GLY A . n A 1 175 LEU 175 175 175 LEU LEU A . n A 1 176 LEU 176 176 176 LEU LEU A . n A 1 177 GLU 177 177 177 GLU GLU A . n A 1 178 ALA 178 178 178 ALA ALA A . n A 1 179 GLY 179 179 179 GLY GLY A . n A 1 180 LYS 180 180 180 LYS LYS A . n A 1 181 SER 181 181 181 SER SER A . n A 1 182 ASP 182 182 182 ASP ASP A . n A 1 183 LEU 183 183 183 LEU LEU A . n A 1 184 GLU 184 184 184 GLU GLU A . n A 1 185 LYS 185 185 185 LYS LYS A . n A 1 186 GLN 186 186 186 GLN GLN A . n A 1 187 GLU 187 187 187 GLU GLU A . n A 1 188 LYS 188 188 188 LYS LYS A . n A 1 189 PRO 189 189 189 PRO PRO A . n A 1 190 VAL 190 190 190 VAL VAL A . n A 1 191 ALA 191 191 191 ALA ALA A . n A 1 192 TRP 192 192 192 TRP TRP A . n A 1 193 LEU 193 193 193 LEU LEU A . n A 1 194 SER 194 194 194 SER SER A . n A 1 195 SER 195 195 195 SER SER A . n A 1 196 VAL 196 196 196 VAL VAL A . n A 1 197 PRO 197 197 197 PRO PRO A . n A 1 198 SER 198 198 ? ? ? A . n A 1 199 SER 199 199 ? ? ? A . n A 1 200 ALA 200 200 ? ? ? A . n A 1 201 HIS 201 201 ? ? ? A . n A 1 202 GLY 202 202 ? ? ? A . n A 1 203 HIS 203 203 ? ? ? A . n A 1 204 ARG 204 204 204 ARG ARG A . n A 1 205 GLN 205 205 205 GLN GLN A . n A 1 206 LEU 206 206 206 LEU LEU A . n A 1 207 VAL 207 207 207 VAL VAL A . n A 1 208 CYS 208 208 208 CYS CYS A . n A 1 209 HIS 209 209 209 HIS HIS A . n A 1 210 VAL 210 210 210 VAL VAL A . n A 1 211 SER 211 211 211 SER SER A . n A 1 212 GLY 212 212 212 GLY GLY A . n A 1 213 PHE 213 213 213 PHE PHE A . n A 1 214 TYR 214 214 214 TYR TYR A . n A 1 215 PRO 215 215 215 PRO PRO A . n A 1 216 LYS 216 216 216 LYS LYS A . n A 1 217 PRO 217 217 217 PRO PRO A . n A 1 218 VAL 218 218 218 VAL VAL A . n A 1 219 TRP 219 219 219 TRP TRP A . n A 1 220 VAL 220 220 220 VAL VAL A . n A 1 221 MET 221 221 221 MET MET A . n A 1 222 TRP 222 222 222 TRP TRP A . n A 1 223 MET 223 223 223 MET MET A . n A 1 224 ARG 224 224 224 ARG ARG A . n A 1 225 GLY 225 225 225 GLY GLY A . n A 1 226 ASP 226 226 226 ASP ASP A . n A 1 227 GLN 227 227 227 GLN GLN A . n A 1 228 GLU 228 228 228 GLU GLU A . n A 1 229 GLN 229 229 229 GLN GLN A . n A 1 230 GLN 230 230 230 GLN GLN A . n A 1 231 GLY 231 231 231 GLY GLY A . n A 1 232 THR 232 232 232 THR THR A . n A 1 233 HIS 233 233 233 HIS HIS A . n A 1 234 ARG 234 234 234 ARG ARG A . n A 1 235 GLY 235 235 235 GLY GLY A . n A 1 236 ASP 236 236 236 ASP ASP A . n A 1 237 PHE 237 237 237 PHE PHE A . n A 1 238 LEU 238 238 238 LEU LEU A . n A 1 239 PRO 239 239 239 PRO PRO A . n A 1 240 ASN 240 240 240 ASN ASN A . n A 1 241 ALA 241 241 241 ALA ALA A . n A 1 242 ASP 242 242 242 ASP ASP A . n A 1 243 GLU 243 243 243 GLU GLU A . n A 1 244 THR 244 244 244 THR THR A . n A 1 245 TRP 245 245 245 TRP TRP A . n A 1 246 TYR 246 246 246 TYR TYR A . n A 1 247 LEU 247 247 247 LEU LEU A . n A 1 248 GLN 248 248 248 GLN GLN A . n A 1 249 ALA 249 249 249 ALA ALA A . n A 1 250 THR 250 250 250 THR THR A . n A 1 251 LEU 251 251 251 LEU LEU A . n A 1 252 ASP 252 252 252 ASP ASP A . n A 1 253 VAL 253 253 253 VAL VAL A . n A 1 254 GLU 254 254 254 GLU GLU A . n A 1 255 ALA 255 255 255 ALA ALA A . n A 1 256 GLY 256 256 256 GLY GLY A . n A 1 257 GLU 257 257 257 GLU GLU A . n A 1 258 GLU 258 258 258 GLU GLU A . n A 1 259 ALA 259 259 259 ALA ALA A . n A 1 260 GLY 260 260 260 GLY GLY A . n A 1 261 LEU 261 261 261 LEU LEU A . n A 1 262 ALA 262 262 262 ALA ALA A . n A 1 263 CYS 263 263 263 CYS CYS A . n A 1 264 ARG 264 264 264 ARG ARG A . n A 1 265 VAL 265 265 265 VAL VAL A . n A 1 266 LYS 266 266 266 LYS LYS A . n A 1 267 HIS 267 267 267 HIS HIS A . n A 1 268 SER 268 268 268 SER SER A . n A 1 269 SER 269 269 269 SER SER A . n A 1 270 LEU 270 270 270 LEU LEU A . n A 1 271 GLY 271 271 271 GLY GLY A . n A 1 272 GLY 272 272 272 GLY GLY A . n A 1 273 GLN 273 273 273 GLN GLN A . n A 1 274 ASP 274 274 274 ASP ASP A . n A 1 275 ILE 275 275 275 ILE ILE A . n A 1 276 ILE 276 276 276 ILE ILE A . n A 1 277 LEU 277 277 277 LEU LEU A . n A 1 278 TYR 278 278 278 TYR TYR A . n A 1 279 TRP 279 279 279 TRP TRP A . n A 1 280 GLY 280 280 ? ? ? A . n A 1 281 SER 281 281 ? ? ? A . n A 1 282 LEU 282 282 ? ? ? A . n A 1 283 HIS 283 283 ? ? ? A . n A 1 284 HIS 284 284 ? ? ? A . n A 1 285 ILE 285 285 ? ? ? A . n A 1 286 LEU 286 286 ? ? ? A . n A 1 287 ASP 287 287 ? ? ? A . n A 1 288 ALA 288 288 ? ? ? A . n A 1 289 GLN 289 289 ? ? ? A . n A 1 290 LYS 290 290 ? ? ? A . n A 1 291 MET 291 291 ? ? ? A . n A 1 292 VAL 292 292 ? ? ? A . n A 1 293 TRP 293 293 ? ? ? A . n A 1 294 ASN 294 294 ? ? ? A . n A 1 295 HIS 295 295 ? ? ? A . n A 1 296 ARG 296 296 ? ? ? A . n A 1 297 HIS 297 297 ? ? ? A . n A 1 298 HIS 298 298 ? ? ? A . n A 1 299 HIS 299 299 ? ? ? A . n A 1 300 HIS 300 300 ? ? ? A . n A 1 301 HIS 301 301 ? ? ? A . n A 1 302 HIS 302 302 ? ? ? A . n B 2 1 ILE 1 1 ? ? ? B . n B 2 2 GLN 2 2 2 GLN GLN B . n B 2 3 LYS 3 3 3 LYS LYS B . n B 2 4 THR 4 4 4 THR THR B . n B 2 5 PRO 5 5 5 PRO PRO B . n B 2 6 GLN 6 6 6 GLN GLN B . n B 2 7 ILE 7 7 7 ILE ILE B . n B 2 8 GLN 8 8 8 GLN GLN B . n B 2 9 VAL 9 9 9 VAL VAL B . n B 2 10 TYR 10 10 10 TYR TYR B . n B 2 11 SER 11 11 11 SER SER B . n B 2 12 ARG 12 12 12 ARG ARG B . n B 2 13 HIS 13 13 13 HIS HIS B . n B 2 14 PRO 14 14 14 PRO PRO B . n B 2 15 PRO 15 15 15 PRO PRO B . n B 2 16 GLU 16 16 16 GLU GLU B . n B 2 17 ASN 17 17 17 ASN ASN B . n B 2 18 GLY 18 18 18 GLY GLY B . n B 2 19 LYS 19 19 19 LYS LYS B . n B 2 20 PRO 20 20 20 PRO PRO B . n B 2 21 ASN 21 21 21 ASN ASN B . n B 2 22 ILE 22 22 22 ILE ILE B . n B 2 23 LEU 23 23 23 LEU LEU B . n B 2 24 ASN 24 24 24 ASN ASN B . n B 2 25 CYS 25 25 25 CYS CYS B . n B 2 26 TYR 26 26 26 TYR TYR B . n B 2 27 VAL 27 27 27 VAL VAL B . n B 2 28 THR 28 28 28 THR THR B . n B 2 29 GLN 29 29 29 GLN GLN B . n B 2 30 PHE 30 30 30 PHE PHE B . n B 2 31 HIS 31 31 31 HIS HIS B . n B 2 32 PRO 32 32 32 PRO PRO B . n B 2 33 PRO 33 33 33 PRO PRO B . n B 2 34 HIS 34 34 34 HIS HIS B . n B 2 35 ILE 35 35 35 ILE ILE B . n B 2 36 GLU 36 36 36 GLU GLU B . n B 2 37 ILE 37 37 37 ILE ILE B . n B 2 38 GLN 38 38 38 GLN GLN B . n B 2 39 MET 39 39 39 MET MET B . n B 2 40 LEU 40 40 40 LEU LEU B . n B 2 41 LYS 41 41 41 LYS LYS B . n B 2 42 ASN 42 42 42 ASN ASN B . n B 2 43 GLY 43 43 43 GLY GLY B . n B 2 44 LYS 44 44 44 LYS LYS B . n B 2 45 LYS 45 45 45 LYS LYS B . n B 2 46 ILE 46 46 46 ILE ILE B . n B 2 47 PRO 47 47 47 PRO PRO B . n B 2 48 LYS 48 48 48 LYS LYS B . n B 2 49 VAL 49 49 49 VAL VAL B . n B 2 50 GLU 50 50 50 GLU GLU B . n B 2 51 MET 51 51 51 MET MET B . n B 2 52 SER 52 52 52 SER SER B . n B 2 53 ASP 53 53 53 ASP ASP B . n B 2 54 MET 54 54 54 MET MET B . n B 2 55 SER 55 55 55 SER SER B . n B 2 56 PHE 56 56 56 PHE PHE B . n B 2 57 SER 57 57 57 SER SER B . n B 2 58 LYS 58 58 58 LYS LYS B . n B 2 59 ASP 59 59 59 ASP ASP B . n B 2 60 TRP 60 60 60 TRP TRP B . n B 2 61 SER 61 61 61 SER SER B . n B 2 62 PHE 62 62 62 PHE PHE B . n B 2 63 TYR 63 63 63 TYR TYR B . n B 2 64 ILE 64 64 64 ILE ILE B . n B 2 65 LEU 65 65 65 LEU LEU B . n B 2 66 ALA 66 66 66 ALA ALA B . n B 2 67 HIS 67 67 67 HIS HIS B . n B 2 68 THR 68 68 68 THR THR B . n B 2 69 GLU 69 69 69 GLU GLU B . n B 2 70 PHE 70 70 70 PHE PHE B . n B 2 71 THR 71 71 71 THR THR B . n B 2 72 PRO 72 72 72 PRO PRO B . n B 2 73 THR 73 73 73 THR THR B . n B 2 74 GLU 74 74 74 GLU GLU B . n B 2 75 THR 75 75 75 THR THR B . n B 2 76 ASP 76 76 76 ASP ASP B . n B 2 77 THR 77 77 77 THR THR B . n B 2 78 TYR 78 78 78 TYR TYR B . n B 2 79 ALA 79 79 79 ALA ALA B . n B 2 80 CYS 80 80 80 CYS CYS B . n B 2 81 ARG 81 81 81 ARG ARG B . n B 2 82 VAL 82 82 82 VAL VAL B . n B 2 83 LYS 83 83 83 LYS LYS B . n B 2 84 HIS 84 84 84 HIS HIS B . n B 2 85 ALA 85 85 85 ALA ALA B . n B 2 86 SER 86 86 86 SER SER B . n B 2 87 MET 87 87 87 MET MET B . n B 2 88 ALA 88 88 88 ALA ALA B . n B 2 89 GLU 89 89 89 GLU GLU B . n B 2 90 PRO 90 90 90 PRO PRO B . n B 2 91 LYS 91 91 91 LYS LYS B . n B 2 92 THR 92 92 92 THR THR B . n B 2 93 VAL 93 93 93 VAL VAL B . n B 2 94 TYR 94 94 94 TYR TYR B . n B 2 95 TRP 95 95 95 TRP TRP B . n B 2 96 ASP 96 96 96 ASP ASP B . n B 2 97 ARG 97 97 97 ARG ARG B . n B 2 98 ASP 98 98 98 ASP ASP B . n B 2 99 MET 99 99 99 MET MET B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 NAG 1 303 288 NAG NAG A . G 7 ERA 1 315 1 ERA GD3 A . H 8 HOH 1 318 1 HOH HOH A . H 8 HOH 2 319 2 HOH HOH A . H 8 HOH 3 320 5 HOH HOH A . H 8 HOH 4 321 7 HOH HOH A . H 8 HOH 5 322 8 HOH HOH A . H 8 HOH 6 323 10 HOH HOH A . H 8 HOH 7 324 11 HOH HOH A . H 8 HOH 8 325 13 HOH HOH A . H 8 HOH 9 326 14 HOH HOH A . H 8 HOH 10 327 18 HOH HOH A . H 8 HOH 11 328 19 HOH HOH A . H 8 HOH 12 329 22 HOH HOH A . H 8 HOH 13 330 23 HOH HOH A . H 8 HOH 14 331 24 HOH HOH A . H 8 HOH 15 332 26 HOH HOH A . H 8 HOH 16 333 27 HOH HOH A . H 8 HOH 17 334 30 HOH HOH A . H 8 HOH 18 335 31 HOH HOH A . H 8 HOH 19 336 32 HOH HOH A . H 8 HOH 20 337 33 HOH HOH A . H 8 HOH 21 338 35 HOH HOH A . H 8 HOH 22 339 36 HOH HOH A . H 8 HOH 23 340 38 HOH HOH A . H 8 HOH 24 341 39 HOH HOH A . H 8 HOH 25 342 43 HOH HOH A . H 8 HOH 26 343 44 HOH HOH A . H 8 HOH 27 344 47 HOH HOH A . H 8 HOH 28 345 48 HOH HOH A . H 8 HOH 29 346 51 HOH HOH A . H 8 HOH 30 347 52 HOH HOH A . H 8 HOH 31 348 54 HOH HOH A . H 8 HOH 32 349 55 HOH HOH A . H 8 HOH 33 350 57 HOH HOH A . H 8 HOH 34 351 58 HOH HOH A . H 8 HOH 35 352 61 HOH HOH A . H 8 HOH 36 353 62 HOH HOH A . H 8 HOH 37 354 63 HOH HOH A . H 8 HOH 38 355 64 HOH HOH A . H 8 HOH 39 356 65 HOH HOH A . H 8 HOH 40 357 67 HOH HOH A . H 8 HOH 41 358 68 HOH HOH A . H 8 HOH 42 359 69 HOH HOH A . H 8 HOH 43 360 70 HOH HOH A . H 8 HOH 44 361 71 HOH HOH A . H 8 HOH 45 362 72 HOH HOH A . H 8 HOH 46 363 73 HOH HOH A . H 8 HOH 47 364 74 HOH HOH A . H 8 HOH 48 365 76 HOH HOH A . H 8 HOH 49 366 77 HOH HOH A . I 8 HOH 1 100 3 HOH HOH B . I 8 HOH 2 101 4 HOH HOH B . I 8 HOH 3 102 6 HOH HOH B . I 8 HOH 4 103 9 HOH HOH B . I 8 HOH 5 104 12 HOH HOH B . I 8 HOH 6 105 15 HOH HOH B . I 8 HOH 7 106 16 HOH HOH B . I 8 HOH 8 107 17 HOH HOH B . I 8 HOH 9 108 20 HOH HOH B . I 8 HOH 10 109 21 HOH HOH B . I 8 HOH 11 110 25 HOH HOH B . I 8 HOH 12 111 28 HOH HOH B . I 8 HOH 13 112 29 HOH HOH B . I 8 HOH 14 113 34 HOH HOH B . I 8 HOH 15 114 37 HOH HOH B . I 8 HOH 16 115 40 HOH HOH B . I 8 HOH 17 116 41 HOH HOH B . I 8 HOH 18 117 42 HOH HOH B . I 8 HOH 19 118 45 HOH HOH B . I 8 HOH 20 119 46 HOH HOH B . I 8 HOH 21 120 49 HOH HOH B . I 8 HOH 22 121 50 HOH HOH B . I 8 HOH 23 122 53 HOH HOH B . I 8 HOH 24 123 56 HOH HOH B . I 8 HOH 25 124 59 HOH HOH B . I 8 HOH 26 125 60 HOH HOH B . I 8 HOH 27 126 66 HOH HOH B . I 8 HOH 28 127 75 HOH HOH B . # _pdbx_molecule_features.prd_id PRD_900004 _pdbx_molecule_features.name beta-lactose _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class Nutrient _pdbx_molecule_features.details oligosaccharide # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900004 _pdbx_molecule.asym_id E # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 20 A ASN 20 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 165 A ASN 165 ? ASN 'GLYCOSYLATION SITE' 3 A ASN 42 A ASN 42 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5350 ? 1 MORE 25 ? 1 'SSA (A^2)' 19630 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-10-12 2 'Structure model' 1 1 2012-02-15 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2023-11-01 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Atomic model' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Database references' 6 3 'Structure model' 'Derived calculations' 7 3 'Structure model' 'Structure summary' 8 4 'Structure model' 'Data collection' 9 4 'Structure model' 'Database references' 10 4 'Structure model' 'Refinement description' 11 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' chem_comp 3 3 'Structure model' database_PDB_caveat 4 3 'Structure model' entity 5 3 'Structure model' entity_name_com 6 3 'Structure model' pdbx_branch_scheme 7 3 'Structure model' pdbx_chem_comp_identifier 8 3 'Structure model' pdbx_entity_branch 9 3 'Structure model' pdbx_entity_branch_descriptor 10 3 'Structure model' pdbx_entity_branch_link 11 3 'Structure model' pdbx_entity_branch_list 12 3 'Structure model' pdbx_entity_nonpoly 13 3 'Structure model' pdbx_molecule_features 14 3 'Structure model' pdbx_nonpoly_scheme 15 3 'Structure model' pdbx_struct_assembly_gen 16 3 'Structure model' pdbx_unobs_or_zero_occ_atoms 17 3 'Structure model' pdbx_validate_chiral 18 3 'Structure model' pdbx_validate_close_contact 19 3 'Structure model' struct_asym 20 3 'Structure model' struct_conn 21 3 'Structure model' struct_ref_seq_dif 22 3 'Structure model' struct_site 23 3 'Structure model' struct_site_gen 24 4 'Structure model' chem_comp 25 4 'Structure model' chem_comp_atom 26 4 'Structure model' chem_comp_bond 27 4 'Structure model' database_2 28 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.B_iso_or_equiv' 2 3 'Structure model' '_atom_site.Cartn_x' 3 3 'Structure model' '_atom_site.Cartn_y' 4 3 'Structure model' '_atom_site.Cartn_z' 5 3 'Structure model' '_atom_site.auth_asym_id' 6 3 'Structure model' '_atom_site.auth_atom_id' 7 3 'Structure model' '_atom_site.auth_comp_id' 8 3 'Structure model' '_atom_site.auth_seq_id' 9 3 'Structure model' '_atom_site.label_asym_id' 10 3 'Structure model' '_atom_site.label_atom_id' 11 3 'Structure model' '_atom_site.label_comp_id' 12 3 'Structure model' '_atom_site.label_entity_id' 13 3 'Structure model' '_atom_site.type_symbol' 14 3 'Structure model' '_chem_comp.name' 15 3 'Structure model' '_chem_comp.type' 16 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 17 3 'Structure model' '_pdbx_unobs_or_zero_occ_atoms.label_asym_id' 18 3 'Structure model' '_pdbx_validate_chiral.auth_asym_id' 19 3 'Structure model' '_pdbx_validate_chiral.auth_seq_id' 20 3 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_2' 21 3 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2' 22 3 'Structure model' '_struct_conn.pdbx_dist_value' 23 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 24 3 'Structure model' '_struct_conn.pdbx_role' 25 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 26 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 27 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 30 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 31 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 32 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 33 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 37 3 'Structure model' '_struct_ref_seq_dif.details' 38 4 'Structure model' '_chem_comp.pdbx_synonyms' 39 4 'Structure model' '_database_2.pdbx_DOI' 40 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 2.065 -10.148 35.604 0.2733 0.3607 0.2133 0.0965 -0.0271 -0.0506 6.3627 3.2951 3.7745 2.3927 -0.0303 -0.3306 -0.0217 -0.4589 0.6797 0.1335 0.1006 0.2708 -0.3993 -0.4470 -0.0789 'X-RAY DIFFRACTION' 2 ? refined 14.095 -1.194 39.482 0.4650 0.2444 0.2906 0.0824 -0.0864 -0.1126 12.6297 5.2299 6.8387 5.3062 -5.3952 -3.7181 0.0705 -0.7343 0.1643 0.1675 -0.2697 -0.2325 -0.3137 0.2379 0.1991 'X-RAY DIFFRACTION' 3 ? refined 19.548 -13.649 36.869 0.2288 0.1337 0.2090 0.0471 -0.0214 -0.0194 5.0312 3.0221 6.5357 1.0737 0.3655 -0.7714 0.0815 -0.2794 -0.4050 0.1367 -0.0226 -0.1527 0.1276 0.0202 -0.0589 'X-RAY DIFFRACTION' 4 ? refined -5.3790 -25.6860 31.0770 0.3823 0.3098 0.3451 -0.0343 0.0003 0.0995 4.1918 1.7380 12.5145 1.8351 6.8777 3.8344 0.1947 -0.5183 -0.3611 -0.0183 -0.0106 0.0365 0.0673 -0.0887 -0.1841 'X-RAY DIFFRACTION' 5 ? refined -5.6210 -31.9890 14.3650 0.4111 0.0551 0.3989 -0.0510 0.0058 0.0018 5.1822 4.8339 9.1690 0.5086 4.0810 3.4033 0.0661 0.3235 -0.7643 -0.6335 0.1363 -0.5166 -0.0748 0.4937 -0.2024 'X-RAY DIFFRACTION' 6 ? refined -1.3700 -39.1180 9.5220 0.6098 0.3443 0.8708 0.1078 0.0440 -0.1662 7.6709 7.2899 2.8536 7.0449 3.1338 1.7423 0.0365 0.1277 -1.6476 -0.4114 0.5724 -1.5515 0.6984 0.4263 -0.6089 'X-RAY DIFFRACTION' 7 ? refined -8.1610 -33.3320 13.4420 0.4283 0.1016 0.4264 0.0415 -0.0387 -0.0151 4.9668 9.2658 3.9189 3.4506 1.9262 1.9104 -0.0142 0.2030 -0.9012 -1.0172 0.2253 -0.1409 0.3277 -0.1489 -0.2111 'X-RAY DIFFRACTION' 8 ? refined -1.9480 -16.6000 12.6060 0.3389 0.0674 0.0753 0.0452 -0.0191 0.0045 16.5298 7.5333 3.5447 7.8422 -1.7465 -0.1194 -0.5839 0.6604 -0.5089 -0.6282 0.3588 -0.2276 -0.2329 0.3236 0.2251 'X-RAY DIFFRACTION' 9 ? refined -4.7510 -14.3260 14.5280 0.3396 0.0920 0.0932 0.0065 -0.0007 0.0222 18.2373 2.9342 4.2169 3.9847 5.3681 1.7719 -0.4359 0.1467 -0.4726 -0.2894 0.2728 0.0413 -0.2227 -0.1148 0.1631 'X-RAY DIFFRACTION' 10 ? refined -2.1150 -7.3150 16.7160 0.4818 0.2072 0.2859 0.0583 -0.0546 0.0089 8.9445 0.6479 7.1311 0.1318 7.4850 -0.6382 -0.4538 0.0576 0.7836 -0.2883 0.0404 0.1760 -0.7310 -0.1950 0.4134 'X-RAY DIFFRACTION' 11 ? refined -9.0400 -12.5680 12.6720 0.3633 0.0261 0.2600 0.0182 -0.0247 0.0289 12.1970 0.8968 7.7853 0.7022 5.2426 0.1100 -0.2356 -0.0120 -0.1055 -0.1668 0.2693 0.4393 -0.2924 -0.6665 -0.0337 'X-RAY DIFFRACTION' 12 ? refined 2.4020 -5.6130 7.8330 0.5207 0.1835 0.2752 -0.0533 -0.0619 0.0949 17.5184 1.5219 6.8867 3.0398 6.9494 0.6662 -0.2481 1.3688 0.7514 -0.1651 0.1317 -0.1949 -0.6222 0.5800 0.1163 'X-RAY DIFFRACTION' 13 ? refined -7.2110 -17.4080 5.0140 0.4147 0.3802 0.1919 0.0240 -0.1234 -0.0248 13.7288 7.6811 12.6347 2.8935 -5.6690 -2.4926 -0.1947 -0.0323 -1.1830 -0.9535 -0.4243 0.0227 1.2380 -0.2240 0.6190 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 7 ? ? A 61 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 62 ? ? A 93 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 94 ? ? A 165 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 166 ? ? A 197 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 204 ? ? A 222 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 A 223 ? ? A 236 ? ? ? ? 'X-RAY DIFFRACTION' 7 7 A 237 ? ? A 279 ? ? ? ? 'X-RAY DIFFRACTION' 8 8 B 2 ? ? B 15 ? ? ? ? 'X-RAY DIFFRACTION' 9 9 B 16 ? ? B 33 ? ? ? ? 'X-RAY DIFFRACTION' 10 10 B 34 ? ? B 60 ? ? ? ? 'X-RAY DIFFRACTION' 11 11 B 61 ? ? B 77 ? ? ? ? 'X-RAY DIFFRACTION' 12 12 B 78 ? ? B 92 ? ? ? ? 'X-RAY DIFFRACTION' 13 13 B 93 ? ? B 99 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal Blu-Ice 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.4.0077 ? 3 DENZO 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # _pdbx_entry_details.entry_id 3AU1 _pdbx_entry_details.nonpolymer_details 'ERA-BGC-GAL IS A PART OF GD3-GANGLIOSIDE.' _pdbx_entry_details.sequence_details ;THE SEQUENCE OF CHAIN A IS FROM REFERENC 2 AND 3 IN UNP P11609, CHAIN B IS NATURAL VARIAN (SEE UNP P01887). ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 318 ? ? O A HOH 332 ? ? 1.80 2 1 O B HOH 103 ? ? O B HOH 113 ? ? 1.89 3 1 O A HOH 322 ? ? O A HOH 337 ? ? 1.95 4 1 O B HOH 104 ? ? O B HOH 114 ? ? 2.00 5 1 O B HOH 101 ? ? O B HOH 112 ? ? 2.07 6 1 OG B SER 61 ? ? O B HOH 112 ? ? 2.08 7 1 O A HOH 319 ? ? O A HOH 333 ? ? 2.11 8 1 O B HOH 100 ? ? O B HOH 111 ? ? 2.16 9 1 CG A ASN 42 ? ? C1 C NAG 1 ? ? 2.17 10 1 O A HOH 320 ? ? O A HOH 334 ? ? 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 22 ? ? -140.49 26.18 2 1 TYR A 94 ? ? -40.90 156.24 3 1 GLN A 121 ? ? 52.03 18.81 4 1 ASP A 166 ? ? -115.20 -77.24 5 1 THR A 167 ? ? -29.14 -53.81 6 1 ASN B 42 ? ? 49.21 24.45 7 1 TRP B 60 ? ? 74.95 -2.12 8 1 ASP B 96 ? ? -68.88 0.31 9 1 ARG B 97 ? ? 73.00 -16.74 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C1 ? C MAN 4 ? PLANAR . 2 1 C1 ? C MAN 5 ? PLANAR . 3 1 C1 ? D GLC 3 ? PLANAR . 4 1 CAB ? A ERA 315 ? PLANAR . 5 1 CAC ? A ERA 315 ? PLANAR . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 21 ? CG ? A ARG 21 CG 2 1 Y 1 A ARG 21 ? CD ? A ARG 21 CD 3 1 Y 1 A ARG 21 ? NE ? A ARG 21 NE 4 1 Y 1 A ARG 21 ? CZ ? A ARG 21 CZ 5 1 Y 1 A ARG 21 ? NH1 ? A ARG 21 NH1 6 1 Y 1 A ARG 21 ? NH2 ? A ARG 21 NH2 7 1 Y 1 A ARG 79 ? CG ? A ARG 79 CG 8 1 Y 1 A ARG 79 ? CD ? A ARG 79 CD 9 1 Y 1 A ARG 79 ? NE ? A ARG 79 NE 10 1 Y 1 A ARG 79 ? CZ ? A ARG 79 CZ 11 1 Y 1 A ARG 79 ? NH1 ? A ARG 79 NH1 12 1 Y 1 A ARG 79 ? NH2 ? A ARG 79 NH2 13 1 Y 1 A GLN 82 ? CG ? A GLN 82 CG 14 1 Y 1 A GLN 82 ? CD ? A GLN 82 CD 15 1 Y 1 A GLN 82 ? OE1 ? A GLN 82 OE1 16 1 Y 1 A GLN 82 ? NE2 ? A GLN 82 NE2 17 1 Y 1 A LYS 91 ? CG ? A LYS 91 CG 18 1 Y 1 A LYS 91 ? CD ? A LYS 91 CD 19 1 Y 1 A LYS 91 ? CE ? A LYS 91 CE 20 1 Y 1 A LYS 91 ? NZ ? A LYS 91 NZ 21 1 Y 1 A ASP 153 ? OD2 ? A ASP 153 OD2 22 1 Y 1 A GLN 230 ? CG ? A GLN 230 CG 23 1 Y 1 A GLN 230 ? CD ? A GLN 230 CD 24 1 Y 1 A GLN 230 ? OE1 ? A GLN 230 OE1 25 1 Y 1 A GLN 230 ? NE2 ? A GLN 230 NE2 26 1 Y 1 A ASP 252 ? CG ? A ASP 252 CG 27 1 Y 1 A ASP 252 ? OD1 ? A ASP 252 OD1 28 1 Y 1 A ASP 252 ? OD2 ? A ASP 252 OD2 29 1 Y 1 A GLU 254 ? CG ? A GLU 254 CG 30 1 Y 1 A GLU 254 ? CD ? A GLU 254 CD 31 1 Y 1 A GLU 254 ? OE1 ? A GLU 254 OE1 32 1 Y 1 A GLU 254 ? OE2 ? A GLU 254 OE2 33 1 Y 1 A GLU 258 ? CG ? A GLU 258 CG 34 1 Y 1 A GLU 258 ? CD ? A GLU 258 CD 35 1 Y 1 A GLU 258 ? OE1 ? A GLU 258 OE1 36 1 Y 1 A GLU 258 ? OE2 ? A GLU 258 OE2 37 1 Y 1 B LYS 48 ? CG ? B LYS 48 CG 38 1 Y 1 B LYS 48 ? CD ? B LYS 48 CD 39 1 Y 1 B LYS 48 ? CE ? B LYS 48 CE 40 1 Y 1 B LYS 48 ? NZ ? B LYS 48 NZ 41 1 Y 1 B LYS 58 ? CG ? B LYS 58 CG 42 1 Y 1 B LYS 58 ? CD ? B LYS 58 CD 43 1 Y 1 B LYS 58 ? CE ? B LYS 58 CE 44 1 Y 1 B LYS 58 ? NZ ? B LYS 58 NZ 45 1 Y 1 B ARG 97 ? CG ? B ARG 97 CG 46 1 Y 1 B ARG 97 ? CD ? B ARG 97 CD 47 1 Y 1 B ARG 97 ? NE ? B ARG 97 NE 48 1 Y 1 B ARG 97 ? CZ ? B ARG 97 CZ 49 1 Y 1 B ARG 97 ? NH1 ? B ARG 97 NH1 50 1 Y 1 B ARG 97 ? NH2 ? B ARG 97 NH2 51 1 N 1 A ERA 315 ? CBX ? G ERA 1 CBX 52 1 N 1 A ERA 315 ? CAQ ? G ERA 1 CAQ 53 1 N 1 A ERA 315 ? CAR ? G ERA 1 CAR 54 1 N 1 A ERA 315 ? CAS ? G ERA 1 CAS # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 1 ? A SER 1 2 1 Y 1 A GLU 2 ? A GLU 2 3 1 Y 1 A ALA 3 ? A ALA 3 4 1 Y 1 A GLN 4 ? A GLN 4 5 1 Y 1 A GLN 5 ? A GLN 5 6 1 Y 1 A LYS 6 ? A LYS 6 7 1 Y 1 A SER 198 ? A SER 198 8 1 Y 1 A SER 199 ? A SER 199 9 1 Y 1 A ALA 200 ? A ALA 200 10 1 Y 1 A HIS 201 ? A HIS 201 11 1 Y 1 A GLY 202 ? A GLY 202 12 1 Y 1 A HIS 203 ? A HIS 203 13 1 Y 1 A GLY 280 ? A GLY 280 14 1 Y 1 A SER 281 ? A SER 281 15 1 Y 1 A LEU 282 ? A LEU 282 16 1 Y 1 A HIS 283 ? A HIS 283 17 1 Y 1 A HIS 284 ? A HIS 284 18 1 Y 1 A ILE 285 ? A ILE 285 19 1 Y 1 A LEU 286 ? A LEU 286 20 1 Y 1 A ASP 287 ? A ASP 287 21 1 Y 1 A ALA 288 ? A ALA 288 22 1 Y 1 A GLN 289 ? A GLN 289 23 1 Y 1 A LYS 290 ? A LYS 290 24 1 Y 1 A MET 291 ? A MET 291 25 1 Y 1 A VAL 292 ? A VAL 292 26 1 Y 1 A TRP 293 ? A TRP 293 27 1 Y 1 A ASN 294 ? A ASN 294 28 1 Y 1 A HIS 295 ? A HIS 295 29 1 Y 1 A ARG 296 ? A ARG 296 30 1 Y 1 A HIS 297 ? A HIS 297 31 1 Y 1 A HIS 298 ? A HIS 298 32 1 Y 1 A HIS 299 ? A HIS 299 33 1 Y 1 A HIS 300 ? A HIS 300 34 1 Y 1 A HIS 301 ? A HIS 301 35 1 Y 1 A HIS 302 ? A HIS 302 36 1 Y 1 B ILE 1 ? B ILE 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BGC C2 C N R 74 BGC C3 C N S 75 BGC C4 C N S 76 BGC C5 C N R 77 BGC C6 C N N 78 BGC C1 C N R 79 BGC O1 O N N 80 BGC O2 O N N 81 BGC O3 O N N 82 BGC O4 O N N 83 BGC O5 O N N 84 BGC O6 O N N 85 BGC H2 H N N 86 BGC H3 H N N 87 BGC H4 H N N 88 BGC H5 H N N 89 BGC H61 H N N 90 BGC H62 H N N 91 BGC H1 H N N 92 BGC HO1 H N N 93 BGC HO2 H N N 94 BGC HO3 H N N 95 BGC HO4 H N N 96 BGC HO6 H N N 97 BMA C1 C N R 98 BMA C2 C N S 99 BMA C3 C N S 100 BMA C4 C N S 101 BMA C5 C N R 102 BMA C6 C N N 103 BMA O1 O N N 104 BMA O2 O N N 105 BMA O3 O N N 106 BMA O4 O N N 107 BMA O5 O N N 108 BMA O6 O N N 109 BMA H1 H N N 110 BMA H2 H N N 111 BMA H3 H N N 112 BMA H4 H N N 113 BMA H5 H N N 114 BMA H61 H N N 115 BMA H62 H N N 116 BMA HO1 H N N 117 BMA HO2 H N N 118 BMA HO3 H N N 119 BMA HO4 H N N 120 BMA HO6 H N N 121 CYS N N N N 122 CYS CA C N R 123 CYS C C N N 124 CYS O O N N 125 CYS CB C N N 126 CYS SG S N N 127 CYS OXT O N N 128 CYS H H N N 129 CYS H2 H N N 130 CYS HA H N N 131 CYS HB2 H N N 132 CYS HB3 H N N 133 CYS HG H N N 134 CYS HXT H N N 135 ERA OA O N N 136 ERA NB N N N 137 ERA CAA C N N 138 ERA CAB C N S 139 ERA CAC C N S 140 ERA OAD O N N 141 ERA CAE C N N 142 ERA CAF C N N 143 ERA CAG C N N 144 ERA CAH C N N 145 ERA CAI C N N 146 ERA CAJ C N N 147 ERA CAK C N N 148 ERA CAL C N N 149 ERA CAM C N N 150 ERA CAN C N N 151 ERA CAO C N N 152 ERA CAP C N N 153 ERA OBA O N N 154 ERA CBB C N N 155 ERA CBC C N N 156 ERA CBD C N N 157 ERA CBE C N N 158 ERA CBF C N N 159 ERA CBG C N N 160 ERA CBH C N N 161 ERA CBI C N N 162 ERA CBJ C N N 163 ERA CBK C N N 164 ERA CBL C N N 165 ERA CBM C N N 166 ERA CBN C N N 167 ERA CBO C N N 168 ERA CBP C N N 169 ERA CBQ C N N 170 ERA CBR C N N 171 ERA CBS C N N 172 ERA CBU C N N 173 ERA CBV C N N 174 ERA CBT C N N 175 ERA HOA H N N 176 ERA HNB H N N 177 ERA HAA H N N 178 ERA HAAA H N N 179 ERA HAB H N N 180 ERA HAC H N N 181 ERA HOAD H N N 182 ERA HAE H N N 183 ERA HAF H N N 184 ERA HAG H N N 185 ERA HAGA H N N 186 ERA HAH H N N 187 ERA HAHA H N N 188 ERA HAI H N N 189 ERA HAIA H N N 190 ERA HAJ H N N 191 ERA HAJA H N N 192 ERA HAK H N N 193 ERA HAKA H N N 194 ERA HAL H N N 195 ERA HALA H N N 196 ERA HAM H N N 197 ERA HAMA H N N 198 ERA HAN H N N 199 ERA HANA H N N 200 ERA HAO H N N 201 ERA HAOA H N N 202 ERA HAP H N N 203 ERA HAPA H N N 204 ERA HBC H N N 205 ERA HBCA H N N 206 ERA HBD H N N 207 ERA HBDA H N N 208 ERA HBE H N N 209 ERA HBEA H N N 210 ERA HBF H N N 211 ERA HBFA H N N 212 ERA HBG H N N 213 ERA HBGA H N N 214 ERA HBH H N N 215 ERA HBI H N N 216 ERA HBJ H N N 217 ERA HBJA H N N 218 ERA HBK H N N 219 ERA HBKA H N N 220 ERA HBL H N N 221 ERA HBLA H N N 222 ERA HBM H N N 223 ERA HBMA H N N 224 ERA HBN H N N 225 ERA HBNA H N N 226 ERA HBO H N N 227 ERA HBOA H N N 228 ERA HBP H N N 229 ERA HBQ H N N 230 ERA HBR H N N 231 ERA HBS H N N 232 ERA HBU H N N 233 ERA HBUA H N N 234 ERA HBV H N N 235 ERA HBVA H N N 236 ERA CBW C N N 237 ERA HBT H N N 238 ERA HBTA H N N 239 ERA CBX C N N 240 ERA CAQ C N N 241 ERA CAR C N N 242 ERA CAS C N N 243 ERA HBX H N N 244 ERA HBX1 H N N 245 ERA HBX2 H N N 246 ERA HAQ H N N 247 ERA HAQA H N N 248 ERA HAR H N N 249 ERA HARA H N N 250 ERA HAS H N N 251 ERA HAS1 H N N 252 ERA HAS2 H N N 253 ERA HBW H N N 254 ERA HBWA H N N 255 FUC C1 C N R 256 FUC C2 C N S 257 FUC C3 C N R 258 FUC C4 C N S 259 FUC C5 C N S 260 FUC C6 C N N 261 FUC O1 O N N 262 FUC O2 O N N 263 FUC O3 O N N 264 FUC O4 O N N 265 FUC O5 O N N 266 FUC H1 H N N 267 FUC H2 H N N 268 FUC H3 H N N 269 FUC H4 H N N 270 FUC H5 H N N 271 FUC H61 H N N 272 FUC H62 H N N 273 FUC H63 H N N 274 FUC HO1 H N N 275 FUC HO2 H N N 276 FUC HO3 H N N 277 FUC HO4 H N N 278 GAL C1 C N R 279 GAL C2 C N R 280 GAL C3 C N S 281 GAL C4 C N R 282 GAL C5 C N R 283 GAL C6 C N N 284 GAL O1 O N N 285 GAL O2 O N N 286 GAL O3 O N N 287 GAL O4 O N N 288 GAL O5 O N N 289 GAL O6 O N N 290 GAL H1 H N N 291 GAL H2 H N N 292 GAL H3 H N N 293 GAL H4 H N N 294 GAL H5 H N N 295 GAL H61 H N N 296 GAL H62 H N N 297 GAL HO1 H N N 298 GAL HO2 H N N 299 GAL HO3 H N N 300 GAL HO4 H N N 301 GAL HO6 H N N 302 GLC C1 C N S 303 GLC C2 C N R 304 GLC C3 C N S 305 GLC C4 C N S 306 GLC C5 C N R 307 GLC C6 C N N 308 GLC O1 O N N 309 GLC O2 O N N 310 GLC O3 O N N 311 GLC O4 O N N 312 GLC O5 O N N 313 GLC O6 O N N 314 GLC H1 H N N 315 GLC H2 H N N 316 GLC H3 H N N 317 GLC H4 H N N 318 GLC H5 H N N 319 GLC H61 H N N 320 GLC H62 H N N 321 GLC HO1 H N N 322 GLC HO2 H N N 323 GLC HO3 H N N 324 GLC HO4 H N N 325 GLC HO6 H N N 326 GLN N N N N 327 GLN CA C N S 328 GLN C C N N 329 GLN O O N N 330 GLN CB C N N 331 GLN CG C N N 332 GLN CD C N N 333 GLN OE1 O N N 334 GLN NE2 N N N 335 GLN OXT O N N 336 GLN H H N N 337 GLN H2 H N N 338 GLN HA H N N 339 GLN HB2 H N N 340 GLN HB3 H N N 341 GLN HG2 H N N 342 GLN HG3 H N N 343 GLN HE21 H N N 344 GLN HE22 H N N 345 GLN HXT H N N 346 GLU N N N N 347 GLU CA C N S 348 GLU C C N N 349 GLU O O N N 350 GLU CB C N N 351 GLU CG C N N 352 GLU CD C N N 353 GLU OE1 O N N 354 GLU OE2 O N N 355 GLU OXT O N N 356 GLU H H N N 357 GLU H2 H N N 358 GLU HA H N N 359 GLU HB2 H N N 360 GLU HB3 H N N 361 GLU HG2 H N N 362 GLU HG3 H N N 363 GLU HE2 H N N 364 GLU HXT H N N 365 GLY N N N N 366 GLY CA C N N 367 GLY C C N N 368 GLY O O N N 369 GLY OXT O N N 370 GLY H H N N 371 GLY H2 H N N 372 GLY HA2 H N N 373 GLY HA3 H N N 374 GLY HXT H N N 375 HIS N N N N 376 HIS CA C N S 377 HIS C C N N 378 HIS O O N N 379 HIS CB C N N 380 HIS CG C Y N 381 HIS ND1 N Y N 382 HIS CD2 C Y N 383 HIS CE1 C Y N 384 HIS NE2 N Y N 385 HIS OXT O N N 386 HIS H H N N 387 HIS H2 H N N 388 HIS HA H N N 389 HIS HB2 H N N 390 HIS HB3 H N N 391 HIS HD1 H N N 392 HIS HD2 H N N 393 HIS HE1 H N N 394 HIS HE2 H N N 395 HIS HXT H N N 396 HOH O O N N 397 HOH H1 H N N 398 HOH H2 H N N 399 ILE N N N N 400 ILE CA C N S 401 ILE C C N N 402 ILE O O N N 403 ILE CB C N S 404 ILE CG1 C N N 405 ILE CG2 C N N 406 ILE CD1 C N N 407 ILE OXT O N N 408 ILE H H N N 409 ILE H2 H N N 410 ILE HA H N N 411 ILE HB H N N 412 ILE HG12 H N N 413 ILE HG13 H N N 414 ILE HG21 H N N 415 ILE HG22 H N N 416 ILE HG23 H N N 417 ILE HD11 H N N 418 ILE HD12 H N N 419 ILE HD13 H N N 420 ILE HXT H N N 421 LEU N N N N 422 LEU CA C N S 423 LEU C C N N 424 LEU O O N N 425 LEU CB C N N 426 LEU CG C N N 427 LEU CD1 C N N 428 LEU CD2 C N N 429 LEU OXT O N N 430 LEU H H N N 431 LEU H2 H N N 432 LEU HA H N N 433 LEU HB2 H N N 434 LEU HB3 H N N 435 LEU HG H N N 436 LEU HD11 H N N 437 LEU HD12 H N N 438 LEU HD13 H N N 439 LEU HD21 H N N 440 LEU HD22 H N N 441 LEU HD23 H N N 442 LEU HXT H N N 443 LYS N N N N 444 LYS CA C N S 445 LYS C C N N 446 LYS O O N N 447 LYS CB C N N 448 LYS CG C N N 449 LYS CD C N N 450 LYS CE C N N 451 LYS NZ N N N 452 LYS OXT O N N 453 LYS H H N N 454 LYS H2 H N N 455 LYS HA H N N 456 LYS HB2 H N N 457 LYS HB3 H N N 458 LYS HG2 H N N 459 LYS HG3 H N N 460 LYS HD2 H N N 461 LYS HD3 H N N 462 LYS HE2 H N N 463 LYS HE3 H N N 464 LYS HZ1 H N N 465 LYS HZ2 H N N 466 LYS HZ3 H N N 467 LYS HXT H N N 468 MAN C1 C N S 469 MAN C2 C N S 470 MAN C3 C N S 471 MAN C4 C N S 472 MAN C5 C N R 473 MAN C6 C N N 474 MAN O1 O N N 475 MAN O2 O N N 476 MAN O3 O N N 477 MAN O4 O N N 478 MAN O5 O N N 479 MAN O6 O N N 480 MAN H1 H N N 481 MAN H2 H N N 482 MAN H3 H N N 483 MAN H4 H N N 484 MAN H5 H N N 485 MAN H61 H N N 486 MAN H62 H N N 487 MAN HO1 H N N 488 MAN HO2 H N N 489 MAN HO3 H N N 490 MAN HO4 H N N 491 MAN HO6 H N N 492 MET N N N N 493 MET CA C N S 494 MET C C N N 495 MET O O N N 496 MET CB C N N 497 MET CG C N N 498 MET SD S N N 499 MET CE C N N 500 MET OXT O N N 501 MET H H N N 502 MET H2 H N N 503 MET HA H N N 504 MET HB2 H N N 505 MET HB3 H N N 506 MET HG2 H N N 507 MET HG3 H N N 508 MET HE1 H N N 509 MET HE2 H N N 510 MET HE3 H N N 511 MET HXT H N N 512 NAG C1 C N R 513 NAG C2 C N R 514 NAG C3 C N R 515 NAG C4 C N S 516 NAG C5 C N R 517 NAG C6 C N N 518 NAG C7 C N N 519 NAG C8 C N N 520 NAG N2 N N N 521 NAG O1 O N N 522 NAG O3 O N N 523 NAG O4 O N N 524 NAG O5 O N N 525 NAG O6 O N N 526 NAG O7 O N N 527 NAG H1 H N N 528 NAG H2 H N N 529 NAG H3 H N N 530 NAG H4 H N N 531 NAG H5 H N N 532 NAG H61 H N N 533 NAG H62 H N N 534 NAG H81 H N N 535 NAG H82 H N N 536 NAG H83 H N N 537 NAG HN2 H N N 538 NAG HO1 H N N 539 NAG HO3 H N N 540 NAG HO4 H N N 541 NAG HO6 H N N 542 PHE N N N N 543 PHE CA C N S 544 PHE C C N N 545 PHE O O N N 546 PHE CB C N N 547 PHE CG C Y N 548 PHE CD1 C Y N 549 PHE CD2 C Y N 550 PHE CE1 C Y N 551 PHE CE2 C Y N 552 PHE CZ C Y N 553 PHE OXT O N N 554 PHE H H N N 555 PHE H2 H N N 556 PHE HA H N N 557 PHE HB2 H N N 558 PHE HB3 H N N 559 PHE HD1 H N N 560 PHE HD2 H N N 561 PHE HE1 H N N 562 PHE HE2 H N N 563 PHE HZ H N N 564 PHE HXT H N N 565 PRO N N N N 566 PRO CA C N S 567 PRO C C N N 568 PRO O O N N 569 PRO CB C N N 570 PRO CG C N N 571 PRO CD C N N 572 PRO OXT O N N 573 PRO H H N N 574 PRO HA H N N 575 PRO HB2 H N N 576 PRO HB3 H N N 577 PRO HG2 H N N 578 PRO HG3 H N N 579 PRO HD2 H N N 580 PRO HD3 H N N 581 PRO HXT H N N 582 SER N N N N 583 SER CA C N S 584 SER C C N N 585 SER O O N N 586 SER CB C N N 587 SER OG O N N 588 SER OXT O N N 589 SER H H N N 590 SER H2 H N N 591 SER HA H N N 592 SER HB2 H N N 593 SER HB3 H N N 594 SER HG H N N 595 SER HXT H N N 596 THR N N N N 597 THR CA C N S 598 THR C C N N 599 THR O O N N 600 THR CB C N R 601 THR OG1 O N N 602 THR CG2 C N N 603 THR OXT O N N 604 THR H H N N 605 THR H2 H N N 606 THR HA H N N 607 THR HB H N N 608 THR HG1 H N N 609 THR HG21 H N N 610 THR HG22 H N N 611 THR HG23 H N N 612 THR HXT H N N 613 TRP N N N N 614 TRP CA C N S 615 TRP C C N N 616 TRP O O N N 617 TRP CB C N N 618 TRP CG C Y N 619 TRP CD1 C Y N 620 TRP CD2 C Y N 621 TRP NE1 N Y N 622 TRP CE2 C Y N 623 TRP CE3 C Y N 624 TRP CZ2 C Y N 625 TRP CZ3 C Y N 626 TRP CH2 C Y N 627 TRP OXT O N N 628 TRP H H N N 629 TRP H2 H N N 630 TRP HA H N N 631 TRP HB2 H N N 632 TRP HB3 H N N 633 TRP HD1 H N N 634 TRP HE1 H N N 635 TRP HE3 H N N 636 TRP HZ2 H N N 637 TRP HZ3 H N N 638 TRP HH2 H N N 639 TRP HXT H N N 640 TYR N N N N 641 TYR CA C N S 642 TYR C C N N 643 TYR O O N N 644 TYR CB C N N 645 TYR CG C Y N 646 TYR CD1 C Y N 647 TYR CD2 C Y N 648 TYR CE1 C Y N 649 TYR CE2 C Y N 650 TYR CZ C Y N 651 TYR OH O N N 652 TYR OXT O N N 653 TYR H H N N 654 TYR H2 H N N 655 TYR HA H N N 656 TYR HB2 H N N 657 TYR HB3 H N N 658 TYR HD1 H N N 659 TYR HD2 H N N 660 TYR HE1 H N N 661 TYR HE2 H N N 662 TYR HH H N N 663 TYR HXT H N N 664 VAL N N N N 665 VAL CA C N S 666 VAL C C N N 667 VAL O O N N 668 VAL CB C N N 669 VAL CG1 C N N 670 VAL CG2 C N N 671 VAL OXT O N N 672 VAL H H N N 673 VAL H2 H N N 674 VAL HA H N N 675 VAL HB H N N 676 VAL HG11 H N N 677 VAL HG12 H N N 678 VAL HG13 H N N 679 VAL HG21 H N N 680 VAL HG22 H N N 681 VAL HG23 H N N 682 VAL HXT H N N 683 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BGC C2 C3 sing N N 70 BGC C2 C1 sing N N 71 BGC C2 O2 sing N N 72 BGC C2 H2 sing N N 73 BGC C3 C4 sing N N 74 BGC C3 O3 sing N N 75 BGC C3 H3 sing N N 76 BGC C4 C5 sing N N 77 BGC C4 O4 sing N N 78 BGC C4 H4 sing N N 79 BGC C5 C6 sing N N 80 BGC C5 O5 sing N N 81 BGC C5 H5 sing N N 82 BGC C6 O6 sing N N 83 BGC C6 H61 sing N N 84 BGC C6 H62 sing N N 85 BGC C1 O1 sing N N 86 BGC C1 O5 sing N N 87 BGC C1 H1 sing N N 88 BGC O1 HO1 sing N N 89 BGC O2 HO2 sing N N 90 BGC O3 HO3 sing N N 91 BGC O4 HO4 sing N N 92 BGC O6 HO6 sing N N 93 BMA C1 C2 sing N N 94 BMA C1 O1 sing N N 95 BMA C1 O5 sing N N 96 BMA C1 H1 sing N N 97 BMA C2 C3 sing N N 98 BMA C2 O2 sing N N 99 BMA C2 H2 sing N N 100 BMA C3 C4 sing N N 101 BMA C3 O3 sing N N 102 BMA C3 H3 sing N N 103 BMA C4 C5 sing N N 104 BMA C4 O4 sing N N 105 BMA C4 H4 sing N N 106 BMA C5 C6 sing N N 107 BMA C5 O5 sing N N 108 BMA C5 H5 sing N N 109 BMA C6 O6 sing N N 110 BMA C6 H61 sing N N 111 BMA C6 H62 sing N N 112 BMA O1 HO1 sing N N 113 BMA O2 HO2 sing N N 114 BMA O3 HO3 sing N N 115 BMA O4 HO4 sing N N 116 BMA O6 HO6 sing N N 117 CYS N CA sing N N 118 CYS N H sing N N 119 CYS N H2 sing N N 120 CYS CA C sing N N 121 CYS CA CB sing N N 122 CYS CA HA sing N N 123 CYS C O doub N N 124 CYS C OXT sing N N 125 CYS CB SG sing N N 126 CYS CB HB2 sing N N 127 CYS CB HB3 sing N N 128 CYS SG HG sing N N 129 CYS OXT HXT sing N N 130 ERA OA CAA sing N N 131 ERA OA HOA sing N N 132 ERA NB CAB sing N N 133 ERA NB CBB sing N N 134 ERA NB HNB sing N N 135 ERA CAA CAB sing N N 136 ERA CAA HAA sing N N 137 ERA CAA HAAA sing N N 138 ERA CAB CAC sing N N 139 ERA CAB HAB sing N N 140 ERA CAC OAD sing N N 141 ERA CAC CAE sing N N 142 ERA CAC HAC sing N N 143 ERA OAD HOAD sing N N 144 ERA CAE CAF doub N E 145 ERA CAE HAE sing N N 146 ERA CAF CAG sing N N 147 ERA CAF HAF sing N N 148 ERA CAG CAH sing N N 149 ERA CAG HAG sing N N 150 ERA CAG HAGA sing N N 151 ERA CAH CAI sing N N 152 ERA CAH HAH sing N N 153 ERA CAH HAHA sing N N 154 ERA CAI CAJ sing N N 155 ERA CAI HAI sing N N 156 ERA CAI HAIA sing N N 157 ERA CAJ CAK sing N N 158 ERA CAJ HAJ sing N N 159 ERA CAJ HAJA sing N N 160 ERA CAK CAL sing N N 161 ERA CAK HAK sing N N 162 ERA CAK HAKA sing N N 163 ERA CAL CAM sing N N 164 ERA CAL HAL sing N N 165 ERA CAL HALA sing N N 166 ERA CAM CAN sing N N 167 ERA CAM HAM sing N N 168 ERA CAM HAMA sing N N 169 ERA CAN CAO sing N N 170 ERA CAN HAN sing N N 171 ERA CAN HANA sing N N 172 ERA CAO CAP sing N N 173 ERA CAO HAO sing N N 174 ERA CAO HAOA sing N N 175 ERA CAP HAP sing N N 176 ERA CAP HAPA sing N N 177 ERA CAP CAQ sing N N 178 ERA OBA CBB doub N N 179 ERA CBB CBC sing N N 180 ERA CBC CBD sing N N 181 ERA CBC HBC sing N N 182 ERA CBC HBCA sing N N 183 ERA CBD CBE sing N N 184 ERA CBD HBD sing N N 185 ERA CBD HBDA sing N N 186 ERA CBE CBF sing N N 187 ERA CBE HBE sing N N 188 ERA CBE HBEA sing N N 189 ERA CBF CBG sing N N 190 ERA CBF HBF sing N N 191 ERA CBF HBFA sing N N 192 ERA CBG CBH sing N N 193 ERA CBG HBG sing N N 194 ERA CBG HBGA sing N N 195 ERA CBH CBI doub N Z 196 ERA CBH HBH sing N N 197 ERA CBI CBJ sing N N 198 ERA CBI HBI sing N N 199 ERA CBJ CBK sing N N 200 ERA CBJ HBJ sing N N 201 ERA CBJ HBJA sing N N 202 ERA CBK CBL sing N N 203 ERA CBK HBK sing N N 204 ERA CBK HBKA sing N N 205 ERA CBL CBM sing N N 206 ERA CBL HBL sing N N 207 ERA CBL HBLA sing N N 208 ERA CBM CBN sing N N 209 ERA CBM HBM sing N N 210 ERA CBM HBMA sing N N 211 ERA CBN CBO sing N N 212 ERA CBN HBN sing N N 213 ERA CBN HBNA sing N N 214 ERA CBO CBP sing N N 215 ERA CBO HBO sing N N 216 ERA CBO HBOA sing N N 217 ERA CBP CBQ doub N E 218 ERA CBP HBP sing N N 219 ERA CBQ CBR sing N N 220 ERA CBQ HBQ sing N N 221 ERA CBR CBS doub N E 222 ERA CBR HBR sing N N 223 ERA CBS CBT sing N N 224 ERA CBS HBS sing N N 225 ERA CBU CBV sing N N 226 ERA CBU CBT sing N N 227 ERA CBU HBU sing N N 228 ERA CBU HBUA sing N N 229 ERA CBV CBW sing N N 230 ERA CBV HBV sing N N 231 ERA CBV HBVA sing N N 232 ERA CBW CBX sing N N 233 ERA CBT HBT sing N N 234 ERA CBT HBTA sing N N 235 ERA CBX HBX sing N N 236 ERA CBX HBX1 sing N N 237 ERA CBX HBX2 sing N N 238 ERA CAQ CAR sing N N 239 ERA CAQ HAQ sing N N 240 ERA CAQ HAQA sing N N 241 ERA CAR CAS sing N N 242 ERA CAR HAR sing N N 243 ERA CAR HARA sing N N 244 ERA CAS HAS sing N N 245 ERA CAS HAS1 sing N N 246 ERA CAS HAS2 sing N N 247 ERA CBW HBW sing N N 248 ERA CBW HBWA sing N N 249 FUC C1 C2 sing N N 250 FUC C1 O1 sing N N 251 FUC C1 O5 sing N N 252 FUC C1 H1 sing N N 253 FUC C2 C3 sing N N 254 FUC C2 O2 sing N N 255 FUC C2 H2 sing N N 256 FUC C3 C4 sing N N 257 FUC C3 O3 sing N N 258 FUC C3 H3 sing N N 259 FUC C4 C5 sing N N 260 FUC C4 O4 sing N N 261 FUC C4 H4 sing N N 262 FUC C5 C6 sing N N 263 FUC C5 O5 sing N N 264 FUC C5 H5 sing N N 265 FUC C6 H61 sing N N 266 FUC C6 H62 sing N N 267 FUC C6 H63 sing N N 268 FUC O1 HO1 sing N N 269 FUC O2 HO2 sing N N 270 FUC O3 HO3 sing N N 271 FUC O4 HO4 sing N N 272 GAL C1 C2 sing N N 273 GAL C1 O1 sing N N 274 GAL C1 O5 sing N N 275 GAL C1 H1 sing N N 276 GAL C2 C3 sing N N 277 GAL C2 O2 sing N N 278 GAL C2 H2 sing N N 279 GAL C3 C4 sing N N 280 GAL C3 O3 sing N N 281 GAL C3 H3 sing N N 282 GAL C4 C5 sing N N 283 GAL C4 O4 sing N N 284 GAL C4 H4 sing N N 285 GAL C5 C6 sing N N 286 GAL C5 O5 sing N N 287 GAL C5 H5 sing N N 288 GAL C6 O6 sing N N 289 GAL C6 H61 sing N N 290 GAL C6 H62 sing N N 291 GAL O1 HO1 sing N N 292 GAL O2 HO2 sing N N 293 GAL O3 HO3 sing N N 294 GAL O4 HO4 sing N N 295 GAL O6 HO6 sing N N 296 GLC C1 C2 sing N N 297 GLC C1 O1 sing N N 298 GLC C1 O5 sing N N 299 GLC C1 H1 sing N N 300 GLC C2 C3 sing N N 301 GLC C2 O2 sing N N 302 GLC C2 H2 sing N N 303 GLC C3 C4 sing N N 304 GLC C3 O3 sing N N 305 GLC C3 H3 sing N N 306 GLC C4 C5 sing N N 307 GLC C4 O4 sing N N 308 GLC C4 H4 sing N N 309 GLC C5 C6 sing N N 310 GLC C5 O5 sing N N 311 GLC C5 H5 sing N N 312 GLC C6 O6 sing N N 313 GLC C6 H61 sing N N 314 GLC C6 H62 sing N N 315 GLC O1 HO1 sing N N 316 GLC O2 HO2 sing N N 317 GLC O3 HO3 sing N N 318 GLC O4 HO4 sing N N 319 GLC O6 HO6 sing N N 320 GLN N CA sing N N 321 GLN N H sing N N 322 GLN N H2 sing N N 323 GLN CA C sing N N 324 GLN CA CB sing N N 325 GLN CA HA sing N N 326 GLN C O doub N N 327 GLN C OXT sing N N 328 GLN CB CG sing N N 329 GLN CB HB2 sing N N 330 GLN CB HB3 sing N N 331 GLN CG CD sing N N 332 GLN CG HG2 sing N N 333 GLN CG HG3 sing N N 334 GLN CD OE1 doub N N 335 GLN CD NE2 sing N N 336 GLN NE2 HE21 sing N N 337 GLN NE2 HE22 sing N N 338 GLN OXT HXT sing N N 339 GLU N CA sing N N 340 GLU N H sing N N 341 GLU N H2 sing N N 342 GLU CA C sing N N 343 GLU CA CB sing N N 344 GLU CA HA sing N N 345 GLU C O doub N N 346 GLU C OXT sing N N 347 GLU CB CG sing N N 348 GLU CB HB2 sing N N 349 GLU CB HB3 sing N N 350 GLU CG CD sing N N 351 GLU CG HG2 sing N N 352 GLU CG HG3 sing N N 353 GLU CD OE1 doub N N 354 GLU CD OE2 sing N N 355 GLU OE2 HE2 sing N N 356 GLU OXT HXT sing N N 357 GLY N CA sing N N 358 GLY N H sing N N 359 GLY N H2 sing N N 360 GLY CA C sing N N 361 GLY CA HA2 sing N N 362 GLY CA HA3 sing N N 363 GLY C O doub N N 364 GLY C OXT sing N N 365 GLY OXT HXT sing N N 366 HIS N CA sing N N 367 HIS N H sing N N 368 HIS N H2 sing N N 369 HIS CA C sing N N 370 HIS CA CB sing N N 371 HIS CA HA sing N N 372 HIS C O doub N N 373 HIS C OXT sing N N 374 HIS CB CG sing N N 375 HIS CB HB2 sing N N 376 HIS CB HB3 sing N N 377 HIS CG ND1 sing Y N 378 HIS CG CD2 doub Y N 379 HIS ND1 CE1 doub Y N 380 HIS ND1 HD1 sing N N 381 HIS CD2 NE2 sing Y N 382 HIS CD2 HD2 sing N N 383 HIS CE1 NE2 sing Y N 384 HIS CE1 HE1 sing N N 385 HIS NE2 HE2 sing N N 386 HIS OXT HXT sing N N 387 HOH O H1 sing N N 388 HOH O H2 sing N N 389 ILE N CA sing N N 390 ILE N H sing N N 391 ILE N H2 sing N N 392 ILE CA C sing N N 393 ILE CA CB sing N N 394 ILE CA HA sing N N 395 ILE C O doub N N 396 ILE C OXT sing N N 397 ILE CB CG1 sing N N 398 ILE CB CG2 sing N N 399 ILE CB HB sing N N 400 ILE CG1 CD1 sing N N 401 ILE CG1 HG12 sing N N 402 ILE CG1 HG13 sing N N 403 ILE CG2 HG21 sing N N 404 ILE CG2 HG22 sing N N 405 ILE CG2 HG23 sing N N 406 ILE CD1 HD11 sing N N 407 ILE CD1 HD12 sing N N 408 ILE CD1 HD13 sing N N 409 ILE OXT HXT sing N N 410 LEU N CA sing N N 411 LEU N H sing N N 412 LEU N H2 sing N N 413 LEU CA C sing N N 414 LEU CA CB sing N N 415 LEU CA HA sing N N 416 LEU C O doub N N 417 LEU C OXT sing N N 418 LEU CB CG sing N N 419 LEU CB HB2 sing N N 420 LEU CB HB3 sing N N 421 LEU CG CD1 sing N N 422 LEU CG CD2 sing N N 423 LEU CG HG sing N N 424 LEU CD1 HD11 sing N N 425 LEU CD1 HD12 sing N N 426 LEU CD1 HD13 sing N N 427 LEU CD2 HD21 sing N N 428 LEU CD2 HD22 sing N N 429 LEU CD2 HD23 sing N N 430 LEU OXT HXT sing N N 431 LYS N CA sing N N 432 LYS N H sing N N 433 LYS N H2 sing N N 434 LYS CA C sing N N 435 LYS CA CB sing N N 436 LYS CA HA sing N N 437 LYS C O doub N N 438 LYS C OXT sing N N 439 LYS CB CG sing N N 440 LYS CB HB2 sing N N 441 LYS CB HB3 sing N N 442 LYS CG CD sing N N 443 LYS CG HG2 sing N N 444 LYS CG HG3 sing N N 445 LYS CD CE sing N N 446 LYS CD HD2 sing N N 447 LYS CD HD3 sing N N 448 LYS CE NZ sing N N 449 LYS CE HE2 sing N N 450 LYS CE HE3 sing N N 451 LYS NZ HZ1 sing N N 452 LYS NZ HZ2 sing N N 453 LYS NZ HZ3 sing N N 454 LYS OXT HXT sing N N 455 MAN C1 C2 sing N N 456 MAN C1 O1 sing N N 457 MAN C1 O5 sing N N 458 MAN C1 H1 sing N N 459 MAN C2 C3 sing N N 460 MAN C2 O2 sing N N 461 MAN C2 H2 sing N N 462 MAN C3 C4 sing N N 463 MAN C3 O3 sing N N 464 MAN C3 H3 sing N N 465 MAN C4 C5 sing N N 466 MAN C4 O4 sing N N 467 MAN C4 H4 sing N N 468 MAN C5 C6 sing N N 469 MAN C5 O5 sing N N 470 MAN C5 H5 sing N N 471 MAN C6 O6 sing N N 472 MAN C6 H61 sing N N 473 MAN C6 H62 sing N N 474 MAN O1 HO1 sing N N 475 MAN O2 HO2 sing N N 476 MAN O3 HO3 sing N N 477 MAN O4 HO4 sing N N 478 MAN O6 HO6 sing N N 479 MET N CA sing N N 480 MET N H sing N N 481 MET N H2 sing N N 482 MET CA C sing N N 483 MET CA CB sing N N 484 MET CA HA sing N N 485 MET C O doub N N 486 MET C OXT sing N N 487 MET CB CG sing N N 488 MET CB HB2 sing N N 489 MET CB HB3 sing N N 490 MET CG SD sing N N 491 MET CG HG2 sing N N 492 MET CG HG3 sing N N 493 MET SD CE sing N N 494 MET CE HE1 sing N N 495 MET CE HE2 sing N N 496 MET CE HE3 sing N N 497 MET OXT HXT sing N N 498 NAG C1 C2 sing N N 499 NAG C1 O1 sing N N 500 NAG C1 O5 sing N N 501 NAG C1 H1 sing N N 502 NAG C2 C3 sing N N 503 NAG C2 N2 sing N N 504 NAG C2 H2 sing N N 505 NAG C3 C4 sing N N 506 NAG C3 O3 sing N N 507 NAG C3 H3 sing N N 508 NAG C4 C5 sing N N 509 NAG C4 O4 sing N N 510 NAG C4 H4 sing N N 511 NAG C5 C6 sing N N 512 NAG C5 O5 sing N N 513 NAG C5 H5 sing N N 514 NAG C6 O6 sing N N 515 NAG C6 H61 sing N N 516 NAG C6 H62 sing N N 517 NAG C7 C8 sing N N 518 NAG C7 N2 sing N N 519 NAG C7 O7 doub N N 520 NAG C8 H81 sing N N 521 NAG C8 H82 sing N N 522 NAG C8 H83 sing N N 523 NAG N2 HN2 sing N N 524 NAG O1 HO1 sing N N 525 NAG O3 HO3 sing N N 526 NAG O4 HO4 sing N N 527 NAG O6 HO6 sing N N 528 PHE N CA sing N N 529 PHE N H sing N N 530 PHE N H2 sing N N 531 PHE CA C sing N N 532 PHE CA CB sing N N 533 PHE CA HA sing N N 534 PHE C O doub N N 535 PHE C OXT sing N N 536 PHE CB CG sing N N 537 PHE CB HB2 sing N N 538 PHE CB HB3 sing N N 539 PHE CG CD1 doub Y N 540 PHE CG CD2 sing Y N 541 PHE CD1 CE1 sing Y N 542 PHE CD1 HD1 sing N N 543 PHE CD2 CE2 doub Y N 544 PHE CD2 HD2 sing N N 545 PHE CE1 CZ doub Y N 546 PHE CE1 HE1 sing N N 547 PHE CE2 CZ sing Y N 548 PHE CE2 HE2 sing N N 549 PHE CZ HZ sing N N 550 PHE OXT HXT sing N N 551 PRO N CA sing N N 552 PRO N CD sing N N 553 PRO N H sing N N 554 PRO CA C sing N N 555 PRO CA CB sing N N 556 PRO CA HA sing N N 557 PRO C O doub N N 558 PRO C OXT sing N N 559 PRO CB CG sing N N 560 PRO CB HB2 sing N N 561 PRO CB HB3 sing N N 562 PRO CG CD sing N N 563 PRO CG HG2 sing N N 564 PRO CG HG3 sing N N 565 PRO CD HD2 sing N N 566 PRO CD HD3 sing N N 567 PRO OXT HXT sing N N 568 SER N CA sing N N 569 SER N H sing N N 570 SER N H2 sing N N 571 SER CA C sing N N 572 SER CA CB sing N N 573 SER CA HA sing N N 574 SER C O doub N N 575 SER C OXT sing N N 576 SER CB OG sing N N 577 SER CB HB2 sing N N 578 SER CB HB3 sing N N 579 SER OG HG sing N N 580 SER OXT HXT sing N N 581 THR N CA sing N N 582 THR N H sing N N 583 THR N H2 sing N N 584 THR CA C sing N N 585 THR CA CB sing N N 586 THR CA HA sing N N 587 THR C O doub N N 588 THR C OXT sing N N 589 THR CB OG1 sing N N 590 THR CB CG2 sing N N 591 THR CB HB sing N N 592 THR OG1 HG1 sing N N 593 THR CG2 HG21 sing N N 594 THR CG2 HG22 sing N N 595 THR CG2 HG23 sing N N 596 THR OXT HXT sing N N 597 TRP N CA sing N N 598 TRP N H sing N N 599 TRP N H2 sing N N 600 TRP CA C sing N N 601 TRP CA CB sing N N 602 TRP CA HA sing N N 603 TRP C O doub N N 604 TRP C OXT sing N N 605 TRP CB CG sing N N 606 TRP CB HB2 sing N N 607 TRP CB HB3 sing N N 608 TRP CG CD1 doub Y N 609 TRP CG CD2 sing Y N 610 TRP CD1 NE1 sing Y N 611 TRP CD1 HD1 sing N N 612 TRP CD2 CE2 doub Y N 613 TRP CD2 CE3 sing Y N 614 TRP NE1 CE2 sing Y N 615 TRP NE1 HE1 sing N N 616 TRP CE2 CZ2 sing Y N 617 TRP CE3 CZ3 doub Y N 618 TRP CE3 HE3 sing N N 619 TRP CZ2 CH2 doub Y N 620 TRP CZ2 HZ2 sing N N 621 TRP CZ3 CH2 sing Y N 622 TRP CZ3 HZ3 sing N N 623 TRP CH2 HH2 sing N N 624 TRP OXT HXT sing N N 625 TYR N CA sing N N 626 TYR N H sing N N 627 TYR N H2 sing N N 628 TYR CA C sing N N 629 TYR CA CB sing N N 630 TYR CA HA sing N N 631 TYR C O doub N N 632 TYR C OXT sing N N 633 TYR CB CG sing N N 634 TYR CB HB2 sing N N 635 TYR CB HB3 sing N N 636 TYR CG CD1 doub Y N 637 TYR CG CD2 sing Y N 638 TYR CD1 CE1 sing Y N 639 TYR CD1 HD1 sing N N 640 TYR CD2 CE2 doub Y N 641 TYR CD2 HD2 sing N N 642 TYR CE1 CZ doub Y N 643 TYR CE1 HE1 sing N N 644 TYR CE2 CZ sing Y N 645 TYR CE2 HE2 sing N N 646 TYR CZ OH sing N N 647 TYR OH HH sing N N 648 TYR OXT HXT sing N N 649 VAL N CA sing N N 650 VAL N H sing N N 651 VAL N H2 sing N N 652 VAL CA C sing N N 653 VAL CA CB sing N N 654 VAL CA HA sing N N 655 VAL C O doub N N 656 VAL C OXT sing N N 657 VAL CB CG1 sing N N 658 VAL CB CG2 sing N N 659 VAL CB HB sing N N 660 VAL CG1 HG11 sing N N 661 VAL CG1 HG12 sing N N 662 VAL CG1 HG13 sing N N 663 VAL CG2 HG21 sing N N 664 VAL CG2 HG22 sing N N 665 VAL CG2 HG23 sing N N 666 VAL OXT HXT sing N N 667 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 3 NAG 1 C NAG 1 A NAG 289 n C 3 NAG 2 C NAG 2 A NAG 290 n C 3 GLC 3 C GLC 3 A GLC 306 n C 3 MAN 4 C MAN 4 A MAN 292 n C 3 MAN 5 C MAN 5 A MAN 293 n D 4 NAG 1 D NAG 1 A NAG 294 n D 4 NAG 2 D NAG 2 A NAG 295 n D 4 GLC 3 D GLC 3 A GLC 311 n D 4 MAN 4 D MAN 4 A MAN 313 n D 4 BMA 5 D BMA 5 A MAN 297 n D 4 FUC 6 D FUC 6 A FUC 299 n E 5 BGC 1 E BGC 1 C GD3 1 n E 5 GAL 2 E GAL 2 C GD3 1 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BGC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpb BGC 'COMMON NAME' GMML 1.0 b-D-glucopyranose BGC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Glcp BGC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal GLC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpa GLC 'COMMON NAME' GMML 1.0 a-D-glucopyranose GLC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Glcp GLC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 3 oligosaccharide 4 oligosaccharide 5 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 DManpa1-2DManpa1-3DGlcpa1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 3 'WURCS=2.0/3,5,4/[a2122h-1b_1-5_2*NCC/3=O][a2122h-1a_1-5][a1122h-1a_1-5]/1-1-2-3-3/a4-b1_b4-c1_c3-d1_d2-e1' WURCS PDB2Glycan 1.1.0 3 3 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][a-D-Glcp]{[(3+1)][a-D-Manp]{[(2+1)][a-D-Manp]{}}}}}}' LINUCS PDB-CARE ? 4 4 'DManpa1-3[DManpb1-6]DGlcpa1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 5 4 ;WURCS=2.0/5,6,5/[a2122h-1b_1-5_2*NCC/3=O][a2122h-1a_1-5][a1122h-1a_1-5][a1122h-1b_1-5][a1221m-1a_1-5]/1-1-2-3-4-5/a4-b1_a6-f1_b4-c1_c3-d1_c6-e1 ; WURCS PDB2Glycan 1.1.0 6 4 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][a-D-Glcp]{[(3+1)][a-D-Manp]{}[(6+1)][b-D-Manp]{}}}[(6+1)][a-L-Fucp]{}}}' LINUCS PDB-CARE ? 7 5 DGalpb1-4DGlcpb1-ROH 'Glycam Condensed Sequence' GMML 1.0 8 5 'WURCS=2.0/2,2,1/[a2122h-1b_1-5][a2112h-1b_1-5]/1-2/a4-b1' WURCS PDB2Glycan 1.1.0 9 5 '[][D-1-deoxy-Glcp]{[(4+1)][b-D-Galp]{}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 3 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 3 3 GLC C1 O1 2 NAG O4 HO4 sing ? 3 3 4 MAN C1 O1 3 GLC O3 HO3 sing ? 4 3 5 MAN C1 O1 4 MAN O2 HO2 sing ? 5 4 2 NAG C1 O1 1 NAG O4 HO4 sing ? 6 4 3 GLC C1 O1 2 NAG O4 HO4 sing ? 7 4 4 MAN C1 O1 3 GLC O3 HO3 sing ? 8 4 5 BMA C1 O1 3 GLC O6 HO6 sing ? 9 4 6 FUC C1 O1 1 NAG O6 HO6 sing ? 10 5 2 GAL C1 O1 1 BGC O4 HO4 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 NAG 1 n 3 NAG 2 n 3 GLC 3 n 3 MAN 4 n 3 MAN 5 n 4 NAG 1 n 4 NAG 2 n 4 GLC 3 n 4 MAN 4 n 4 BMA 5 n 4 FUC 6 n 5 BGC 1 n 5 GAL 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 6 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 7 '(7Z,15E,17E)-N-[(2S,3S,4E)-1,3-dihydroxyoctadec-4-en-2-yl]tricosa-7,15,17-trienamide' ERA 8 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2GAZ _pdbx_initial_refinement_model.details 'PDB code 2GAZ' #