data_3AYD
#
_entry.id 3AYD
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.380
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 3AYD pdb_00003ayd 10.2210/pdb3ayd/pdb
RCSB RCSB029849 ? ?
WWPDB D_1000029849 ? ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.details
_pdbx_database_related.content_type
PDB 3AYA . unspecified
PDB 3AYC . unspecified
PDB 3AYE . unspecified
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 3AYD
_pdbx_database_status.recvd_initial_deposition_date 2011-05-04
_pdbx_database_status.deposit_site PDBJ
_pdbx_database_status.process_site PDBJ
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Bian, C.F.' 1
'Li, D.F.' 2
'Wang, D.C.' 3
#
_citation.id primary
_citation.title
'Structural basis for distinct binding properties of the human galectins to thomsen-friedenreich antigen'
_citation.journal_abbrev 'Plos One'
_citation.journal_volume 6
_citation.page_first e25007
_citation.page_last e25007
_citation.year 2011
_citation.journal_id_ASTM ?
_citation.country US
_citation.journal_id_ISSN 1932-6203
_citation.journal_id_CSD ?
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 21949831
_citation.pdbx_database_id_DOI 10.1371/journal.pone.0025007
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Bian, C.F.' 1 ?
primary 'Zhang, Y.' 2 ?
primary 'Sun, H.' 3 ?
primary 'Li, D.F.' 4 ?
primary 'Wang, D.C.' 5 ?
#
_cell.entry_id 3AYD
_cell.length_a 50.730
_cell.length_b 50.730
_cell.length_c 106.780
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 120.00
_cell.Z_PDB 6
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 3AYD
_symmetry.space_group_name_H-M 'P 32 2 1'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 154
_symmetry.space_group_name_Hall ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer man Galectin-3 15409.682 1 ? ?
'C-TERMINAL DOMAIN, UNP residues 117-250' ?
2 branched man 'beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose' 383.349 2 ? ? ? ?
3 non-polymer syn P-NITROPHENOL 139.109 2 ? ? ? ?
4 non-polymer syn 'SULFATE ION' 96.063 4 ? ? ? ?
5 water nat water 18.015 245 ? ? ? ?
#
loop_
_entity_name_com.entity_id
_entity_name_com.name
1
;Gal-3, 35 kDa lectin, Carbohydrate-binding protein 35, CBP 35, Galactose-specific lectin 3, Galactoside-binding protein, GALBP, IgE-binding protein, L-31, Laminin-binding protein, Lectin L-29, Mac-2 antigen
;
2 'Thomsen-Friedenreich antigen'
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code
;MPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFPFESG
KPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI
;
_entity_poly.pdbx_seq_one_letter_code_can
;MPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFPFESG
KPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI
;
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET n
1 2 PRO n
1 3 TYR n
1 4 ASN n
1 5 LEU n
1 6 PRO n
1 7 LEU n
1 8 PRO n
1 9 GLY n
1 10 GLY n
1 11 VAL n
1 12 VAL n
1 13 PRO n
1 14 ARG n
1 15 MET n
1 16 LEU n
1 17 ILE n
1 18 THR n
1 19 ILE n
1 20 LEU n
1 21 GLY n
1 22 THR n
1 23 VAL n
1 24 LYS n
1 25 PRO n
1 26 ASN n
1 27 ALA n
1 28 ASN n
1 29 ARG n
1 30 ILE n
1 31 ALA n
1 32 LEU n
1 33 ASP n
1 34 PHE n
1 35 GLN n
1 36 ARG n
1 37 GLY n
1 38 ASN n
1 39 ASP n
1 40 VAL n
1 41 ALA n
1 42 PHE n
1 43 HIS n
1 44 PHE n
1 45 ASN n
1 46 PRO n
1 47 ARG n
1 48 PHE n
1 49 ASN n
1 50 GLU n
1 51 ASN n
1 52 ASN n
1 53 ARG n
1 54 ARG n
1 55 VAL n
1 56 ILE n
1 57 VAL n
1 58 CYS n
1 59 ASN n
1 60 THR n
1 61 LYS n
1 62 LEU n
1 63 ASP n
1 64 ASN n
1 65 ASN n
1 66 TRP n
1 67 GLY n
1 68 ARG n
1 69 GLU n
1 70 GLU n
1 71 ARG n
1 72 GLN n
1 73 SER n
1 74 VAL n
1 75 PHE n
1 76 PRO n
1 77 PHE n
1 78 GLU n
1 79 SER n
1 80 GLY n
1 81 LYS n
1 82 PRO n
1 83 PHE n
1 84 LYS n
1 85 ILE n
1 86 GLN n
1 87 VAL n
1 88 LEU n
1 89 VAL n
1 90 GLU n
1 91 PRO n
1 92 ASP n
1 93 HIS n
1 94 PHE n
1 95 LYS n
1 96 VAL n
1 97 ALA n
1 98 VAL n
1 99 ASN n
1 100 ASP n
1 101 ALA n
1 102 HIS n
1 103 LEU n
1 104 LEU n
1 105 GLN n
1 106 TYR n
1 107 ASN n
1 108 HIS n
1 109 ARG n
1 110 VAL n
1 111 LYS n
1 112 LYS n
1 113 LEU n
1 114 ASN n
1 115 GLU n
1 116 ILE n
1 117 SER n
1 118 LYS n
1 119 LEU n
1 120 GLY n
1 121 ILE n
1 122 SER n
1 123 GLY n
1 124 ASP n
1 125 ILE n
1 126 ASP n
1 127 LEU n
1 128 THR n
1 129 SER n
1 130 ALA n
1 131 SER n
1 132 TYR n
1 133 THR n
1 134 MET n
1 135 ILE n
#
_entity_src_gen.entity_id 1
_entity_src_gen.pdbx_src_id 1
_entity_src_gen.pdbx_alt_source_flag sample
_entity_src_gen.pdbx_seq_type ?
_entity_src_gen.pdbx_beg_seq_num ?
_entity_src_gen.pdbx_end_seq_num ?
_entity_src_gen.gene_src_common_name human
_entity_src_gen.gene_src_genus ?
_entity_src_gen.pdbx_gene_src_gene 'LGALS3, MAC2'
_entity_src_gen.gene_src_species ?
_entity_src_gen.gene_src_strain ?
_entity_src_gen.gene_src_tissue ?
_entity_src_gen.gene_src_tissue_fraction ?
_entity_src_gen.gene_src_details ?
_entity_src_gen.pdbx_gene_src_fragment ?
_entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens'
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606
_entity_src_gen.pdbx_gene_src_variant ?
_entity_src_gen.pdbx_gene_src_cell_line ?
_entity_src_gen.pdbx_gene_src_atcc ?
_entity_src_gen.pdbx_gene_src_organ ?
_entity_src_gen.pdbx_gene_src_organelle ?
_entity_src_gen.pdbx_gene_src_cell ?
_entity_src_gen.pdbx_gene_src_cellular_location ?
_entity_src_gen.host_org_common_name ?
_entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli'
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562
_entity_src_gen.host_org_genus ?
_entity_src_gen.pdbx_host_org_gene ?
_entity_src_gen.pdbx_host_org_organ ?
_entity_src_gen.host_org_species ?
_entity_src_gen.pdbx_host_org_tissue ?
_entity_src_gen.pdbx_host_org_tissue_fraction ?
_entity_src_gen.pdbx_host_org_strain 'BL21(DE3)'
_entity_src_gen.pdbx_host_org_variant ?
_entity_src_gen.pdbx_host_org_cell_line ?
_entity_src_gen.pdbx_host_org_atcc ?
_entity_src_gen.pdbx_host_org_culture_collection ?
_entity_src_gen.pdbx_host_org_cell ?
_entity_src_gen.pdbx_host_org_organelle ?
_entity_src_gen.pdbx_host_org_cellular_location ?
_entity_src_gen.pdbx_host_org_vector_type plasmid
_entity_src_gen.pdbx_host_org_vector ?
_entity_src_gen.host_org_details ?
_entity_src_gen.expression_system_id ?
_entity_src_gen.plasmid_name pET22b
_entity_src_gen.plasmid_details ?
_entity_src_gen.pdbx_description ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code LEG3_HUMAN
_struct_ref.pdbx_db_accession P17931
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code
;PYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFPFESGK
PFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI
;
_struct_ref.pdbx_align_begin 117
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 3AYD
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 2
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 135
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession P17931
_struct_ref_seq.db_align_beg 117
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 250
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 117
_struct_ref_seq.pdbx_auth_seq_align_end 250
#
_struct_ref_seq_dif.align_id 1
_struct_ref_seq_dif.pdbx_pdb_id_code 3AYD
_struct_ref_seq_dif.mon_id MET
_struct_ref_seq_dif.pdbx_pdb_strand_id A
_struct_ref_seq_dif.seq_num 1
_struct_ref_seq_dif.pdbx_pdb_ins_code ?
_struct_ref_seq_dif.pdbx_seq_db_name UNP
_struct_ref_seq_dif.pdbx_seq_db_accession_code P17931
_struct_ref_seq_dif.db_mon_id ?
_struct_ref_seq_dif.pdbx_seq_db_seq_num ?
_struct_ref_seq_dif.details 'expression tag'
_struct_ref_seq_dif.pdbx_auth_seq_num 116
_struct_ref_seq_dif.pdbx_ordinal 1
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
A2G 'D-saccharide, alpha linking' . 2-acetamido-2-deoxy-alpha-D-galactopyranose
;N-acetyl-alpha-D-galactosamine; 2-acetamido-2-deoxy-alpha-D-galactose; 2-acetamido-2-deoxy-D-galactose; 2-acetamido-2-deoxy-galactose; N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE
;
'C8 H15 N O6' 221.208
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158
GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose'
'C6 H12 O6' 180.156
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
NPO non-polymer . P-NITROPHENOL ? 'C6 H5 N O3' 139.109
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
_exptl.entry_id 3AYD
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.57
_exptl_crystal.density_percent_sol 52.21
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.temp 298
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 5.5
_exptl_crystal_grow.pdbx_details
'2.0 A.S., 0.1MBis-Tris, 5mM beta-Mercaptoethanol, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K'
_exptl_crystal_grow.pdbx_pH_range .
#
_diffrn.id 1
_diffrn.ambient_temp 85
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type 'ADSC QUANTUM 315'
_diffrn_detector.pdbx_collection_date 2010-11-30
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.9793
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'SSRF BEAMLINE BL17U'
_diffrn_source.pdbx_synchrotron_site SSRF
_diffrn_source.pdbx_synchrotron_beamline BL17U
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list 0.9793
#
_reflns.entry_id 3AYD
_reflns.observed_criterion_sigma_I 0.0
_reflns.observed_criterion_sigma_F 0.0
_reflns.d_resolution_low 40.62
_reflns.d_resolution_high 1.9
_reflns.number_obs 13046
_reflns.number_all 13120
_reflns.percent_possible_obs 99.4
_reflns.pdbx_Rmerge_I_obs 0.058
_reflns.pdbx_Rsym_value 0.058
_reflns.pdbx_netI_over_sigmaI 29.4
_reflns.B_iso_Wilson_estimate 19.9
_reflns.pdbx_redundancy 9.7
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_ordinal 1
_reflns.pdbx_diffrn_id 1
#
_reflns_shell.d_res_high 1.90
_reflns_shell.d_res_low 2.00
_reflns_shell.percent_possible_all 98.8
_reflns_shell.Rmerge_I_obs 0.076
_reflns_shell.pdbx_Rsym_value 0.076
_reflns_shell.meanI_over_sigI_obs 15.4
_reflns_shell.pdbx_redundancy 5.7
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all 1859
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_rejects ?
_reflns_shell.pdbx_netI_over_sigmaI_obs ?
_reflns_shell.number_possible ?
_reflns_shell.Rmerge_F_all ?
_reflns_shell.Rmerge_F_obs ?
_reflns_shell.Rmerge_I_all ?
_reflns_shell.meanI_over_sigI_all ?
_reflns_shell.pdbx_Rrim_I_all ?
_reflns_shell.pdbx_Rpim_I_all ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
#
_refine.entry_id 3AYD
_refine.ls_number_reflns_obs 11093
_refine.ls_number_reflns_all 12363
_refine.pdbx_ls_sigma_I 2.0
_refine.pdbx_ls_sigma_F 2.0
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 33.93
_refine.ls_d_res_high 1.90
_refine.ls_percent_reflns_obs 94.2
_refine.ls_R_factor_obs ?
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.182
_refine.ls_R_factor_R_free 0.217
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free ?
_refine.ls_number_reflns_R_free 1270
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.B_iso_mean 23.9
_refine.aniso_B[1][1] 2.04
_refine.aniso_B[2][2] 2.04
_refine.aniso_B[3][3] -4.09
_refine.aniso_B[1][2] 0.00
_refine.aniso_B[1][3] 0.00
_refine.aniso_B[2][3] 0.00
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol 63.8435
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details 'Used weighted full matrix least squares procedure.'
_refine.pdbx_starting_model 'PDB ENTRY 2NN8'
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model Isotropic
_refine.pdbx_stereochemistry_target_values 'Engh & Huber'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_B ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.ls_redundancy_reflns_obs ?
_refine.B_iso_min ?
_refine.B_iso_max ?
_refine.overall_SU_R_free ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_diffrn_id 1
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_analyze.entry_id 3AYD
_refine_analyze.Luzzati_coordinate_error_obs 0.19
_refine_analyze.Luzzati_sigma_a_obs 1.10
_refine_analyze.Luzzati_d_res_low_obs 5.00
_refine_analyze.Luzzati_coordinate_error_free 0.24
_refine_analyze.Luzzati_sigma_a_free 0.14
_refine_analyze.Luzzati_d_res_low_free ?
_refine_analyze.number_disordered_residues ?
_refine_analyze.occupancy_sum_hydrogen ?
_refine_analyze.occupancy_sum_non_hydrogen ?
_refine_analyze.pdbx_Luzzati_d_res_high_obs ?
_refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 1086
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 90
_refine_hist.number_atoms_solvent 245
_refine_hist.number_atoms_total 1421
_refine_hist.d_res_high 1.90
_refine_hist.d_res_low 33.93
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_restraint_function
_refine_ls_restr.pdbx_refine_id
c_bond_d 0.007 ? ? ? ? 'X-RAY DIFFRACTION'
c_angle_deg 1.5 ? ? ? ? 'X-RAY DIFFRACTION'
c_dihedral_angle_d 26.1 ? ? ? ? 'X-RAY DIFFRACTION'
c_improper_angle_d 1.11 ? ? ? ? 'X-RAY DIFFRACTION'
c_mcbond_it 1.528 1.500 ? ? ? 'X-RAY DIFFRACTION'
c_scbond_it 2.103 2.000 ? ? ? 'X-RAY DIFFRACTION'
c_mcangle_it 2.289 2.000 ? ? ? 'X-RAY DIFFRACTION'
c_scangle_it 3.128 2.500 ? ? ? 'X-RAY DIFFRACTION'
#
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_ls_shell.pdbx_total_number_of_bins_used ?
_refine_ls_shell.d_res_high 1.90
_refine_ls_shell.d_res_low 2.02
_refine_ls_shell.number_reflns_R_work ?
_refine_ls_shell.R_factor_R_work 0.184
_refine_ls_shell.percent_reflns_obs 92.9
_refine_ls_shell.R_factor_R_free 0.225
_refine_ls_shell.R_factor_R_free_error 0.016
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 206
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.number_reflns_obs 1784
_refine_ls_shell.redundancy_reflns_obs ?
#
loop_
_pdbx_xplor_file.pdbx_refine_id
_pdbx_xplor_file.serial_no
_pdbx_xplor_file.param_file
_pdbx_xplor_file.topol_file
'X-RAY DIFFRACTION' 1 protein_rep.param ?
'X-RAY DIFFRACTION' 2 water_rep.param ?
'X-RAY DIFFRACTION' 3 ion.param ?
'X-RAY DIFFRACTION' 4 tfn-.param ?
'X-RAY DIFFRACTION' 5 BME.param ?
#
_struct.entry_id 3AYD
_struct.title 'Crystal structure of galectin-3 CRD domian complexed with TFN'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 3AYD
_struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN'
_struct_keywords.text
'Rossmann Fold, a beta-galactose-binding protein, beta-galactosides, cell-surface, nuclear, SUGAR BINDING PROTEIN'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 2 ?
D N N 3 ?
E N N 3 ?
F N N 4 ?
G N N 4 ?
H N N 4 ?
I N N 4 ?
J N N 5 ?
#
_struct_biol.id 1
_struct_biol.details ?
#
_struct_conf.conf_type_id HELX_P
_struct_conf.id HELX_P1
_struct_conf.pdbx_PDB_helix_id 1
_struct_conf.beg_label_comp_id LYS
_struct_conf.beg_label_asym_id A
_struct_conf.beg_label_seq_id 112
_struct_conf.pdbx_beg_PDB_ins_code ?
_struct_conf.end_label_comp_id ILE
_struct_conf.end_label_asym_id A
_struct_conf.end_label_seq_id 116
_struct_conf.pdbx_end_PDB_ins_code ?
_struct_conf.beg_auth_comp_id LYS
_struct_conf.beg_auth_asym_id A
_struct_conf.beg_auth_seq_id 227
_struct_conf.end_auth_comp_id ILE
_struct_conf.end_auth_asym_id A
_struct_conf.end_auth_seq_id 231
_struct_conf.pdbx_PDB_helix_class 5
_struct_conf.details ?
_struct_conf.pdbx_PDB_helix_length 5
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale one ? D NPO . OH ? ? ? 1_555 B A2G . C1 ? ? A NPO 251 B A2G 1 1_555 ? ? ? ? ? ? ? 1.436 ? ?
covale2 covale one ? E NPO . OH ? ? ? 1_555 C A2G . C1 ? ? A NPO 254 C A2G 1 1_555 ? ? ? ? ? ? ? 1.434 ? ?
covale3 covale both ? B A2G . O3 ? ? ? 1_555 B GAL . C1 ? ? B A2G 1 B GAL 2 1_555 ? ? ? ? ? ? ? 1.434 ? ?
covale4 covale both ? C A2G . O3 ? ? ? 1_555 C GAL . C1 ? ? C A2G 1 C GAL 2 1_555 ? ? ? ? ? ? ? 1.434 ? ?
#
_struct_conn_type.id covale
_struct_conn_type.criteria ?
_struct_conn_type.reference ?
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
A ? 6 ?
B ? 6 ?
C ? 5 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
A 1 2 ? anti-parallel
A 2 3 ? anti-parallel
A 3 4 ? anti-parallel
A 4 5 ? anti-parallel
A 5 6 ? anti-parallel
B 1 2 ? anti-parallel
B 2 3 ? anti-parallel
B 3 4 ? anti-parallel
B 4 5 ? anti-parallel
B 5 6 ? anti-parallel
C 1 2 ? anti-parallel
C 2 3 ? anti-parallel
C 3 4 ? anti-parallel
C 4 5 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
A 1 TYR A 3 ? PRO A 6 ? TYR A 118 PRO A 121
A 2 LYS A 118 ? GLY A 123 ? LYS A 233 GLY A 238
A 3 ILE A 30 ? ARG A 36 ? ILE A 145 ARG A 151
A 4 ASP A 39 ? ARG A 47 ? ASP A 154 ARG A 162
A 5 VAL A 55 ? LEU A 62 ? VAL A 170 LEU A 177
A 6 ASN A 65 ? TRP A 66 ? ASN A 180 TRP A 181
B 1 TYR A 3 ? PRO A 6 ? TYR A 118 PRO A 121
B 2 LYS A 118 ? GLY A 123 ? LYS A 233 GLY A 238
B 3 ILE A 30 ? ARG A 36 ? ILE A 145 ARG A 151
B 4 ASP A 39 ? ARG A 47 ? ASP A 154 ARG A 162
B 5 VAL A 55 ? LEU A 62 ? VAL A 170 LEU A 177
B 6 GLU A 70 ? GLN A 72 ? GLU A 185 GLN A 187
C 1 ALA A 101 ? ASN A 107 ? ALA A 216 ASN A 222
C 2 HIS A 93 ? VAL A 98 ? HIS A 208 VAL A 213
C 3 PRO A 82 ? VAL A 89 ? PRO A 197 VAL A 204
C 4 MET A 15 ? VAL A 23 ? MET A 130 VAL A 138
C 5 ILE A 125 ? MET A 134 ? ILE A 240 MET A 249
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
A 1 2 N TYR A 3 ? N TYR A 118 O ILE A 121 ? O ILE A 236
A 2 3 O GLY A 120 ? O GLY A 235 N ASP A 33 ? N ASP A 148
A 3 4 N PHE A 34 ? N PHE A 149 O PHE A 42 ? O PHE A 157
A 4 5 N ARG A 47 ? N ARG A 162 O VAL A 55 ? O VAL A 170
A 5 6 N LEU A 62 ? N LEU A 177 O ASN A 65 ? O ASN A 180
B 1 2 N TYR A 3 ? N TYR A 118 O ILE A 121 ? O ILE A 236
B 2 3 O GLY A 120 ? O GLY A 235 N ASP A 33 ? N ASP A 148
B 3 4 N PHE A 34 ? N PHE A 149 O PHE A 42 ? O PHE A 157
B 4 5 N ARG A 47 ? N ARG A 162 O VAL A 55 ? O VAL A 170
B 5 6 N CYS A 58 ? N CYS A 173 O GLU A 70 ? O GLU A 185
C 1 2 O LEU A 104 ? O LEU A 219 N VAL A 96 ? N VAL A 211
C 2 3 O ALA A 97 ? O ALA A 212 N GLN A 86 ? N GLN A 201
C 3 4 O ILE A 85 ? O ILE A 200 N ILE A 19 ? N ILE A 134
C 4 5 N LEU A 20 ? N LEU A 135 O THR A 128 ? O THR A 243
#
_database_PDB_matrix.entry_id 3AYD
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_atom_sites.entry_id 3AYD
_atom_sites.fract_transf_matrix[1][1] 0.019712
_atom_sites.fract_transf_matrix[1][2] 0.011381
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.022762
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.009365
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
S
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 MET 1 116 116 MET MET A . n
A 1 2 PRO 2 117 117 PRO PRO A . n
A 1 3 TYR 3 118 118 TYR TYR A . n
A 1 4 ASN 4 119 119 ASN ASN A . n
A 1 5 LEU 5 120 120 LEU LEU A . n
A 1 6 PRO 6 121 121 PRO PRO A . n
A 1 7 LEU 7 122 122 LEU LEU A . n
A 1 8 PRO 8 123 123 PRO PRO A . n
A 1 9 GLY 9 124 124 GLY GLY A . n
A 1 10 GLY 10 125 125 GLY GLY A . n
A 1 11 VAL 11 126 126 VAL VAL A . n
A 1 12 VAL 12 127 127 VAL VAL A . n
A 1 13 PRO 13 128 128 PRO PRO A . n
A 1 14 ARG 14 129 129 ARG ARG A . n
A 1 15 MET 15 130 130 MET MET A . n
A 1 16 LEU 16 131 131 LEU LEU A . n
A 1 17 ILE 17 132 132 ILE ILE A . n
A 1 18 THR 18 133 133 THR THR A . n
A 1 19 ILE 19 134 134 ILE ILE A . n
A 1 20 LEU 20 135 135 LEU LEU A . n
A 1 21 GLY 21 136 136 GLY GLY A . n
A 1 22 THR 22 137 137 THR THR A . n
A 1 23 VAL 23 138 138 VAL VAL A . n
A 1 24 LYS 24 139 139 LYS LYS A . n
A 1 25 PRO 25 140 140 PRO PRO A . n
A 1 26 ASN 26 141 141 ASN ASN A . n
A 1 27 ALA 27 142 142 ALA ALA A . n
A 1 28 ASN 28 143 143 ASN ASN A . n
A 1 29 ARG 29 144 144 ARG ARG A . n
A 1 30 ILE 30 145 145 ILE ILE A . n
A 1 31 ALA 31 146 146 ALA ALA A . n
A 1 32 LEU 32 147 147 LEU LEU A . n
A 1 33 ASP 33 148 148 ASP ASP A . n
A 1 34 PHE 34 149 149 PHE PHE A . n
A 1 35 GLN 35 150 150 GLN GLN A . n
A 1 36 ARG 36 151 151 ARG ARG A . n
A 1 37 GLY 37 152 152 GLY GLY A . n
A 1 38 ASN 38 153 153 ASN ASN A . n
A 1 39 ASP 39 154 154 ASP ASP A . n
A 1 40 VAL 40 155 155 VAL VAL A . n
A 1 41 ALA 41 156 156 ALA ALA A . n
A 1 42 PHE 42 157 157 PHE PHE A . n
A 1 43 HIS 43 158 158 HIS HIS A . n
A 1 44 PHE 44 159 159 PHE PHE A . n
A 1 45 ASN 45 160 160 ASN ASN A . n
A 1 46 PRO 46 161 161 PRO PRO A . n
A 1 47 ARG 47 162 162 ARG ARG A . n
A 1 48 PHE 48 163 163 PHE PHE A . n
A 1 49 ASN 49 164 164 ASN ASN A . n
A 1 50 GLU 50 165 165 GLU GLU A . n
A 1 51 ASN 51 166 166 ASN ASN A . n
A 1 52 ASN 52 167 167 ASN ASN A . n
A 1 53 ARG 53 168 168 ARG ARG A . n
A 1 54 ARG 54 169 169 ARG ARG A . n
A 1 55 VAL 55 170 170 VAL VAL A . n
A 1 56 ILE 56 171 171 ILE ILE A . n
A 1 57 VAL 57 172 172 VAL VAL A . n
A 1 58 CYS 58 173 173 CYS CYS A . n
A 1 59 ASN 59 174 174 ASN ASN A . n
A 1 60 THR 60 175 175 THR THR A . n
A 1 61 LYS 61 176 176 LYS LYS A . n
A 1 62 LEU 62 177 177 LEU LEU A . n
A 1 63 ASP 63 178 178 ASP ASP A . n
A 1 64 ASN 64 179 179 ASN ASN A . n
A 1 65 ASN 65 180 180 ASN ASN A . n
A 1 66 TRP 66 181 181 TRP TRP A . n
A 1 67 GLY 67 182 182 GLY GLY A . n
A 1 68 ARG 68 183 183 ARG ARG A . n
A 1 69 GLU 69 184 184 GLU GLU A . n
A 1 70 GLU 70 185 185 GLU GLU A . n
A 1 71 ARG 71 186 186 ARG ARG A . n
A 1 72 GLN 72 187 187 GLN GLN A . n
A 1 73 SER 73 188 188 SER SER A . n
A 1 74 VAL 74 189 189 VAL VAL A . n
A 1 75 PHE 75 190 190 PHE PHE A . n
A 1 76 PRO 76 191 191 PRO PRO A . n
A 1 77 PHE 77 192 192 PHE PHE A . n
A 1 78 GLU 78 193 193 GLU GLU A . n
A 1 79 SER 79 194 194 SER SER A . n
A 1 80 GLY 80 195 195 GLY GLY A . n
A 1 81 LYS 81 196 196 LYS LYS A . n
A 1 82 PRO 82 197 197 PRO PRO A . n
A 1 83 PHE 83 198 198 PHE PHE A . n
A 1 84 LYS 84 199 199 LYS LYS A . n
A 1 85 ILE 85 200 200 ILE ILE A . n
A 1 86 GLN 86 201 201 GLN GLN A . n
A 1 87 VAL 87 202 202 VAL VAL A . n
A 1 88 LEU 88 203 203 LEU LEU A . n
A 1 89 VAL 89 204 204 VAL VAL A . n
A 1 90 GLU 90 205 205 GLU GLU A . n
A 1 91 PRO 91 206 206 PRO PRO A . n
A 1 92 ASP 92 207 207 ASP ASP A . n
A 1 93 HIS 93 208 208 HIS HIS A . n
A 1 94 PHE 94 209 209 PHE PHE A . n
A 1 95 LYS 95 210 210 LYS LYS A . n
A 1 96 VAL 96 211 211 VAL VAL A . n
A 1 97 ALA 97 212 212 ALA ALA A . n
A 1 98 VAL 98 213 213 VAL VAL A . n
A 1 99 ASN 99 214 214 ASN ASN A . n
A 1 100 ASP 100 215 215 ASP ASP A . n
A 1 101 ALA 101 216 216 ALA ALA A . n
A 1 102 HIS 102 217 217 HIS HIS A . n
A 1 103 LEU 103 218 218 LEU LEU A . n
A 1 104 LEU 104 219 219 LEU LEU A . n
A 1 105 GLN 105 220 220 GLN GLN A . n
A 1 106 TYR 106 221 221 TYR TYR A . n
A 1 107 ASN 107 222 222 ASN ASN A . n
A 1 108 HIS 108 223 223 HIS HIS A . n
A 1 109 ARG 109 224 224 ARG ARG A . n
A 1 110 VAL 110 225 225 VAL VAL A . n
A 1 111 LYS 111 226 226 LYS LYS A . n
A 1 112 LYS 112 227 227 LYS LYS A . n
A 1 113 LEU 113 228 228 LEU LEU A . n
A 1 114 ASN 114 229 229 ASN ASN A . n
A 1 115 GLU 115 230 230 GLU GLU A . n
A 1 116 ILE 116 231 231 ILE ILE A . n
A 1 117 SER 117 232 232 SER SER A . n
A 1 118 LYS 118 233 233 LYS LYS A . n
A 1 119 LEU 119 234 234 LEU LEU A . n
A 1 120 GLY 120 235 235 GLY GLY A . n
A 1 121 ILE 121 236 236 ILE ILE A . n
A 1 122 SER 122 237 237 SER SER A . n
A 1 123 GLY 123 238 238 GLY GLY A . n
A 1 124 ASP 124 239 239 ASP ASP A . n
A 1 125 ILE 125 240 240 ILE ILE A . n
A 1 126 ASP 126 241 241 ASP ASP A . n
A 1 127 LEU 127 242 242 LEU LEU A . n
A 1 128 THR 128 243 243 THR THR A . n
A 1 129 SER 129 244 244 SER SER A . n
A 1 130 ALA 130 245 245 ALA ALA A . n
A 1 131 SER 131 246 246 SER SER A . n
A 1 132 TYR 132 247 247 TYR TYR A . n
A 1 133 THR 133 248 248 THR THR A . n
A 1 134 MET 134 249 249 MET MET A . n
A 1 135 ILE 135 250 250 ILE ILE A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 NPO 1 251 251 NPO TFN A .
E 3 NPO 1 254 252 NPO TFN A .
F 4 SO4 1 1 1 SO4 SO4 A .
G 4 SO4 1 2 2 SO4 SO4 A .
H 4 SO4 1 3 3 SO4 SO4 A .
I 4 SO4 1 4 4 SO4 SO4 A .
J 5 HOH 1 5 5 HOH HOH A .
J 5 HOH 2 6 6 HOH HOH A .
J 5 HOH 3 7 7 HOH HOH A .
J 5 HOH 4 8 8 HOH HOH A .
J 5 HOH 5 9 9 HOH HOH A .
J 5 HOH 6 10 10 HOH HOH A .
J 5 HOH 7 11 11 HOH HOH A .
J 5 HOH 8 12 12 HOH HOH A .
J 5 HOH 9 13 13 HOH HOH A .
J 5 HOH 10 14 14 HOH HOH A .
J 5 HOH 11 15 15 HOH HOH A .
J 5 HOH 12 16 16 HOH HOH A .
J 5 HOH 13 17 17 HOH HOH A .
J 5 HOH 14 18 18 HOH HOH A .
J 5 HOH 15 19 19 HOH HOH A .
J 5 HOH 16 20 20 HOH HOH A .
J 5 HOH 17 21 21 HOH HOH A .
J 5 HOH 18 22 22 HOH HOH A .
J 5 HOH 19 23 23 HOH HOH A .
J 5 HOH 20 24 24 HOH HOH A .
J 5 HOH 21 25 25 HOH HOH A .
J 5 HOH 22 26 26 HOH HOH A .
J 5 HOH 23 27 27 HOH HOH A .
J 5 HOH 24 28 28 HOH HOH A .
J 5 HOH 25 29 29 HOH HOH A .
J 5 HOH 26 30 30 HOH HOH A .
J 5 HOH 27 31 31 HOH HOH A .
J 5 HOH 28 32 32 HOH HOH A .
J 5 HOH 29 33 33 HOH HOH A .
J 5 HOH 30 34 34 HOH HOH A .
J 5 HOH 31 35 35 HOH HOH A .
J 5 HOH 32 36 36 HOH HOH A .
J 5 HOH 33 37 37 HOH HOH A .
J 5 HOH 34 38 38 HOH HOH A .
J 5 HOH 35 39 39 HOH HOH A .
J 5 HOH 36 40 40 HOH HOH A .
J 5 HOH 37 41 41 HOH HOH A .
J 5 HOH 38 42 42 HOH HOH A .
J 5 HOH 39 43 43 HOH HOH A .
J 5 HOH 40 44 44 HOH HOH A .
J 5 HOH 41 45 45 HOH HOH A .
J 5 HOH 42 46 46 HOH HOH A .
J 5 HOH 43 47 47 HOH HOH A .
J 5 HOH 44 48 48 HOH HOH A .
J 5 HOH 45 49 49 HOH HOH A .
J 5 HOH 46 50 50 HOH HOH A .
J 5 HOH 47 51 51 HOH HOH A .
J 5 HOH 48 52 52 HOH HOH A .
J 5 HOH 49 53 53 HOH HOH A .
J 5 HOH 50 54 54 HOH HOH A .
J 5 HOH 51 55 55 HOH HOH A .
J 5 HOH 52 56 56 HOH HOH A .
J 5 HOH 53 57 57 HOH HOH A .
J 5 HOH 54 58 58 HOH HOH A .
J 5 HOH 55 59 59 HOH HOH A .
J 5 HOH 56 60 60 HOH HOH A .
J 5 HOH 57 61 61 HOH HOH A .
J 5 HOH 58 62 62 HOH HOH A .
J 5 HOH 59 63 63 HOH HOH A .
J 5 HOH 60 64 64 HOH HOH A .
J 5 HOH 61 65 65 HOH HOH A .
J 5 HOH 62 66 66 HOH HOH A .
J 5 HOH 63 67 67 HOH HOH A .
J 5 HOH 64 68 68 HOH HOH A .
J 5 HOH 65 69 69 HOH HOH A .
J 5 HOH 66 70 70 HOH HOH A .
J 5 HOH 67 71 71 HOH HOH A .
J 5 HOH 68 72 72 HOH HOH A .
J 5 HOH 69 73 73 HOH HOH A .
J 5 HOH 70 74 74 HOH HOH A .
J 5 HOH 71 75 75 HOH HOH A .
J 5 HOH 72 76 76 HOH HOH A .
J 5 HOH 73 77 77 HOH HOH A .
J 5 HOH 74 78 78 HOH HOH A .
J 5 HOH 75 79 79 HOH HOH A .
J 5 HOH 76 80 80 HOH HOH A .
J 5 HOH 77 81 81 HOH HOH A .
J 5 HOH 78 82 82 HOH HOH A .
J 5 HOH 79 83 83 HOH HOH A .
J 5 HOH 80 84 84 HOH HOH A .
J 5 HOH 81 85 85 HOH HOH A .
J 5 HOH 82 86 86 HOH HOH A .
J 5 HOH 83 87 87 HOH HOH A .
J 5 HOH 84 88 88 HOH HOH A .
J 5 HOH 85 89 89 HOH HOH A .
J 5 HOH 86 90 90 HOH HOH A .
J 5 HOH 87 91 91 HOH HOH A .
J 5 HOH 88 92 92 HOH HOH A .
J 5 HOH 89 93 93 HOH HOH A .
J 5 HOH 90 94 94 HOH HOH A .
J 5 HOH 91 95 95 HOH HOH A .
J 5 HOH 92 96 96 HOH HOH A .
J 5 HOH 93 97 97 HOH HOH A .
J 5 HOH 94 98 98 HOH HOH A .
J 5 HOH 95 99 99 HOH HOH A .
J 5 HOH 96 100 100 HOH HOH A .
J 5 HOH 97 101 101 HOH HOH A .
J 5 HOH 98 102 102 HOH HOH A .
J 5 HOH 99 103 103 HOH HOH A .
J 5 HOH 100 104 104 HOH HOH A .
J 5 HOH 101 105 105 HOH HOH A .
J 5 HOH 102 106 106 HOH HOH A .
J 5 HOH 103 107 107 HOH HOH A .
J 5 HOH 104 108 108 HOH HOH A .
J 5 HOH 105 109 109 HOH HOH A .
J 5 HOH 106 110 110 HOH HOH A .
J 5 HOH 107 111 111 HOH HOH A .
J 5 HOH 108 112 112 HOH HOH A .
J 5 HOH 109 113 113 HOH HOH A .
J 5 HOH 110 114 114 HOH HOH A .
J 5 HOH 111 115 115 HOH HOH A .
J 5 HOH 112 257 1 HOH HOH A .
J 5 HOH 113 258 2 HOH HOH A .
J 5 HOH 114 259 3 HOH HOH A .
J 5 HOH 115 260 4 HOH HOH A .
J 5 HOH 116 261 116 HOH HOH A .
J 5 HOH 117 262 117 HOH HOH A .
J 5 HOH 118 263 118 HOH HOH A .
J 5 HOH 119 264 119 HOH HOH A .
J 5 HOH 120 265 120 HOH HOH A .
J 5 HOH 121 266 121 HOH HOH A .
J 5 HOH 122 267 122 HOH HOH A .
J 5 HOH 123 268 123 HOH HOH A .
J 5 HOH 124 269 124 HOH HOH A .
J 5 HOH 125 270 125 HOH HOH A .
J 5 HOH 126 271 126 HOH HOH A .
J 5 HOH 127 272 127 HOH HOH A .
J 5 HOH 128 273 128 HOH HOH A .
J 5 HOH 129 274 129 HOH HOH A .
J 5 HOH 130 275 130 HOH HOH A .
J 5 HOH 131 276 131 HOH HOH A .
J 5 HOH 132 277 132 HOH HOH A .
J 5 HOH 133 278 133 HOH HOH A .
J 5 HOH 134 279 134 HOH HOH A .
J 5 HOH 135 280 135 HOH HOH A .
J 5 HOH 136 281 136 HOH HOH A .
J 5 HOH 137 282 137 HOH HOH A .
J 5 HOH 138 283 138 HOH HOH A .
J 5 HOH 139 284 139 HOH HOH A .
J 5 HOH 140 285 140 HOH HOH A .
J 5 HOH 141 286 141 HOH HOH A .
J 5 HOH 142 287 142 HOH HOH A .
J 5 HOH 143 288 143 HOH HOH A .
J 5 HOH 144 289 144 HOH HOH A .
J 5 HOH 145 290 145 HOH HOH A .
J 5 HOH 146 291 146 HOH HOH A .
J 5 HOH 147 292 147 HOH HOH A .
J 5 HOH 148 293 148 HOH HOH A .
J 5 HOH 149 294 149 HOH HOH A .
J 5 HOH 150 295 150 HOH HOH A .
J 5 HOH 151 296 151 HOH HOH A .
J 5 HOH 152 297 152 HOH HOH A .
J 5 HOH 153 298 153 HOH HOH A .
J 5 HOH 154 299 154 HOH HOH A .
J 5 HOH 155 300 155 HOH HOH A .
J 5 HOH 156 301 156 HOH HOH A .
J 5 HOH 157 302 157 HOH HOH A .
J 5 HOH 158 303 158 HOH HOH A .
J 5 HOH 159 304 159 HOH HOH A .
J 5 HOH 160 305 160 HOH HOH A .
J 5 HOH 161 306 161 HOH HOH A .
J 5 HOH 162 307 162 HOH HOH A .
J 5 HOH 163 308 163 HOH HOH A .
J 5 HOH 164 309 164 HOH HOH A .
J 5 HOH 165 310 165 HOH HOH A .
J 5 HOH 166 311 166 HOH HOH A .
J 5 HOH 167 312 167 HOH HOH A .
J 5 HOH 168 313 168 HOH HOH A .
J 5 HOH 169 314 169 HOH HOH A .
J 5 HOH 170 315 170 HOH HOH A .
J 5 HOH 171 316 171 HOH HOH A .
J 5 HOH 172 317 172 HOH HOH A .
J 5 HOH 173 318 173 HOH HOH A .
J 5 HOH 174 319 174 HOH HOH A .
J 5 HOH 175 320 175 HOH HOH A .
J 5 HOH 176 321 176 HOH HOH A .
J 5 HOH 177 322 177 HOH HOH A .
J 5 HOH 178 323 178 HOH HOH A .
J 5 HOH 179 324 179 HOH HOH A .
J 5 HOH 180 325 180 HOH HOH A .
J 5 HOH 181 326 181 HOH HOH A .
J 5 HOH 182 327 182 HOH HOH A .
J 5 HOH 183 328 183 HOH HOH A .
J 5 HOH 184 329 184 HOH HOH A .
J 5 HOH 185 330 185 HOH HOH A .
J 5 HOH 186 331 186 HOH HOH A .
J 5 HOH 187 332 187 HOH HOH A .
J 5 HOH 188 333 188 HOH HOH A .
J 5 HOH 189 334 189 HOH HOH A .
J 5 HOH 190 335 190 HOH HOH A .
J 5 HOH 191 336 191 HOH HOH A .
J 5 HOH 192 337 192 HOH HOH A .
J 5 HOH 193 338 193 HOH HOH A .
J 5 HOH 194 339 194 HOH HOH A .
J 5 HOH 195 340 195 HOH HOH A .
J 5 HOH 196 341 196 HOH HOH A .
J 5 HOH 197 342 197 HOH HOH A .
J 5 HOH 198 343 198 HOH HOH A .
J 5 HOH 199 344 199 HOH HOH A .
J 5 HOH 200 345 200 HOH HOH A .
J 5 HOH 201 346 201 HOH HOH A .
J 5 HOH 202 347 202 HOH HOH A .
J 5 HOH 203 348 203 HOH HOH A .
J 5 HOH 204 349 204 HOH HOH A .
J 5 HOH 205 350 205 HOH HOH A .
J 5 HOH 206 351 206 HOH HOH A .
J 5 HOH 207 352 207 HOH HOH A .
J 5 HOH 208 353 208 HOH HOH A .
J 5 HOH 209 354 209 HOH HOH A .
J 5 HOH 210 355 210 HOH HOH A .
J 5 HOH 211 356 211 HOH HOH A .
J 5 HOH 212 357 212 HOH HOH A .
J 5 HOH 213 358 213 HOH HOH A .
J 5 HOH 214 359 214 HOH HOH A .
J 5 HOH 215 360 215 HOH HOH A .
J 5 HOH 216 361 216 HOH HOH A .
J 5 HOH 217 362 217 HOH HOH A .
J 5 HOH 218 363 218 HOH HOH A .
J 5 HOH 219 364 219 HOH HOH A .
J 5 HOH 220 365 220 HOH HOH A .
J 5 HOH 221 366 221 HOH HOH A .
J 5 HOH 222 367 222 HOH HOH A .
J 5 HOH 223 368 223 HOH HOH A .
J 5 HOH 224 369 224 HOH HOH A .
J 5 HOH 225 370 225 HOH HOH A .
J 5 HOH 226 371 226 HOH HOH A .
J 5 HOH 227 372 227 HOH HOH A .
J 5 HOH 228 373 228 HOH HOH A .
J 5 HOH 229 374 229 HOH HOH A .
J 5 HOH 230 375 230 HOH HOH A .
J 5 HOH 231 376 231 HOH HOH A .
J 5 HOH 232 377 232 HOH HOH A .
J 5 HOH 233 378 233 HOH HOH A .
J 5 HOH 234 379 234 HOH HOH A .
J 5 HOH 235 380 235 HOH HOH A .
J 5 HOH 236 381 236 HOH HOH A .
J 5 HOH 237 382 237 HOH HOH A .
J 5 HOH 238 383 238 HOH HOH A .
J 5 HOH 239 384 239 HOH HOH A .
J 5 HOH 240 385 240 HOH HOH A .
J 5 HOH 241 386 241 HOH HOH A .
J 5 HOH 242 387 242 HOH HOH A .
J 5 HOH 243 388 243 HOH HOH A .
J 5 HOH 244 389 244 HOH HOH A .
J 5 HOH 245 390 245 HOH HOH A .
#
_pdbx_molecule_features.prd_id PRD_900084
_pdbx_molecule_features.name 'Thomsen-Friedenreich antigen'
_pdbx_molecule_features.type Oligosaccharide
_pdbx_molecule_features.class Antigen
_pdbx_molecule_features.details oligosaccharide
#
loop_
_pdbx_molecule.instance_id
_pdbx_molecule.prd_id
_pdbx_molecule.asym_id
1 PRD_900084 B
2 PRD_900084 C
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2011-10-12
2 'Structure model' 2 0 2020-07-29
3 'Structure model' 2 1 2023-11-01
#
loop_
_pdbx_audit_revision_details.ordinal
_pdbx_audit_revision_details.revision_ordinal
_pdbx_audit_revision_details.data_content_type
_pdbx_audit_revision_details.provider
_pdbx_audit_revision_details.type
_pdbx_audit_revision_details.description
_pdbx_audit_revision_details.details
1 1 'Structure model' repository 'Initial release' ? ?
2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Atomic model'
2 2 'Structure model' 'Data collection'
3 2 'Structure model' 'Database references'
4 2 'Structure model' 'Derived calculations'
5 2 'Structure model' 'Structure summary'
6 3 'Structure model' 'Data collection'
7 3 'Structure model' 'Database references'
8 3 'Structure model' 'Refinement description'
9 3 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 2 'Structure model' atom_site
2 2 'Structure model' chem_comp
3 2 'Structure model' entity
4 2 'Structure model' entity_name_com
5 2 'Structure model' pdbx_branch_scheme
6 2 'Structure model' pdbx_chem_comp_identifier
7 2 'Structure model' pdbx_entity_branch
8 2 'Structure model' pdbx_entity_branch_descriptor
9 2 'Structure model' pdbx_entity_branch_link
10 2 'Structure model' pdbx_entity_branch_list
11 2 'Structure model' pdbx_entity_nonpoly
12 2 'Structure model' pdbx_molecule_features
13 2 'Structure model' pdbx_nonpoly_scheme
14 2 'Structure model' pdbx_struct_assembly_gen
15 2 'Structure model' struct_asym
16 2 'Structure model' struct_conn
17 2 'Structure model' struct_ref_seq_dif
18 2 'Structure model' struct_site
19 2 'Structure model' struct_site_gen
20 3 'Structure model' chem_comp
21 3 'Structure model' chem_comp_atom
22 3 'Structure model' chem_comp_bond
23 3 'Structure model' database_2
24 3 'Structure model' pdbx_initial_refinement_model
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 2 'Structure model' '_atom_site.B_iso_or_equiv'
2 2 'Structure model' '_atom_site.Cartn_x'
3 2 'Structure model' '_atom_site.Cartn_y'
4 2 'Structure model' '_atom_site.Cartn_z'
5 2 'Structure model' '_atom_site.auth_asym_id'
6 2 'Structure model' '_atom_site.auth_atom_id'
7 2 'Structure model' '_atom_site.auth_comp_id'
8 2 'Structure model' '_atom_site.auth_seq_id'
9 2 'Structure model' '_atom_site.label_asym_id'
10 2 'Structure model' '_atom_site.label_atom_id'
11 2 'Structure model' '_atom_site.label_comp_id'
12 2 'Structure model' '_atom_site.label_entity_id'
13 2 'Structure model' '_atom_site.type_symbol'
14 2 'Structure model' '_chem_comp.name'
15 2 'Structure model' '_chem_comp.type'
16 2 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list'
17 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
18 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id'
19 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id'
20 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
21 2 'Structure model' '_struct_conn.ptnr1_label_asym_id'
22 2 'Structure model' '_struct_conn.ptnr1_label_atom_id'
23 2 'Structure model' '_struct_conn.ptnr1_label_comp_id'
24 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id'
25 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
26 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
27 2 'Structure model' '_struct_conn.ptnr2_label_asym_id'
28 2 'Structure model' '_struct_conn.ptnr2_label_comp_id'
29 2 'Structure model' '_struct_ref_seq_dif.details'
30 3 'Structure model' '_chem_comp.pdbx_synonyms'
31 3 'Structure model' '_database_2.pdbx_DOI'
32 3 'Structure model' '_database_2.pdbx_database_accession'
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
ADSC 'data collection' Quantum ? 1
PHASES phasing . ? 2
CNS refinement . ? 3
MOSFLM 'data reduction' . ? 4
SCALA 'data scaling' . ? 5
#
_pdbx_entry_details.entry_id 3AYD
_pdbx_entry_details.nonpolymer_details
'TF P-NITROPHENYLS ARE COMPOSED OF RESIDUES 251-253 AND 254-256 (NPO-A2G-GAL) RESPECTIVELY.'
_pdbx_entry_details.sequence_details ?
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.has_ligand_of_interest ?
#
_pdbx_validate_torsion.id 1
_pdbx_validate_torsion.PDB_model_num 1
_pdbx_validate_torsion.auth_comp_id ARG
_pdbx_validate_torsion.auth_asym_id A
_pdbx_validate_torsion.auth_seq_id 129
_pdbx_validate_torsion.PDB_ins_code ?
_pdbx_validate_torsion.label_alt_id ?
_pdbx_validate_torsion.phi 89.45
_pdbx_validate_torsion.psi -7.04
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
A2G O5 O N N 1
A2G C1 C N S 2
A2G O1 O N N 3
A2G C2 C N R 4
A2G N2 N N N 5
A2G C3 C N R 6
A2G O3 O N N 7
A2G C4 C N R 8
A2G O4 O N N 9
A2G C5 C N R 10
A2G C6 C N N 11
A2G O6 O N N 12
A2G C7 C N N 13
A2G O7 O N N 14
A2G C8 C N N 15
A2G H1 H N N 16
A2G HO1 H N N 17
A2G H2 H N N 18
A2G HN2 H N N 19
A2G H3 H N N 20
A2G HO3 H N N 21
A2G H4 H N N 22
A2G HO4 H N N 23
A2G H5 H N N 24
A2G H61 H N N 25
A2G H81 H N N 26
A2G H82 H N N 27
A2G H83 H N N 28
A2G H62 H N N 29
A2G HO6 H N N 30
ALA N N N N 31
ALA CA C N S 32
ALA C C N N 33
ALA O O N N 34
ALA CB C N N 35
ALA OXT O N N 36
ALA H H N N 37
ALA H2 H N N 38
ALA HA H N N 39
ALA HB1 H N N 40
ALA HB2 H N N 41
ALA HB3 H N N 42
ALA HXT H N N 43
ARG N N N N 44
ARG CA C N S 45
ARG C C N N 46
ARG O O N N 47
ARG CB C N N 48
ARG CG C N N 49
ARG CD C N N 50
ARG NE N N N 51
ARG CZ C N N 52
ARG NH1 N N N 53
ARG NH2 N N N 54
ARG OXT O N N 55
ARG H H N N 56
ARG H2 H N N 57
ARG HA H N N 58
ARG HB2 H N N 59
ARG HB3 H N N 60
ARG HG2 H N N 61
ARG HG3 H N N 62
ARG HD2 H N N 63
ARG HD3 H N N 64
ARG HE H N N 65
ARG HH11 H N N 66
ARG HH12 H N N 67
ARG HH21 H N N 68
ARG HH22 H N N 69
ARG HXT H N N 70
ASN N N N N 71
ASN CA C N S 72
ASN C C N N 73
ASN O O N N 74
ASN CB C N N 75
ASN CG C N N 76
ASN OD1 O N N 77
ASN ND2 N N N 78
ASN OXT O N N 79
ASN H H N N 80
ASN H2 H N N 81
ASN HA H N N 82
ASN HB2 H N N 83
ASN HB3 H N N 84
ASN HD21 H N N 85
ASN HD22 H N N 86
ASN HXT H N N 87
ASP N N N N 88
ASP CA C N S 89
ASP C C N N 90
ASP O O N N 91
ASP CB C N N 92
ASP CG C N N 93
ASP OD1 O N N 94
ASP OD2 O N N 95
ASP OXT O N N 96
ASP H H N N 97
ASP H2 H N N 98
ASP HA H N N 99
ASP HB2 H N N 100
ASP HB3 H N N 101
ASP HD2 H N N 102
ASP HXT H N N 103
CYS N N N N 104
CYS CA C N R 105
CYS C C N N 106
CYS O O N N 107
CYS CB C N N 108
CYS SG S N N 109
CYS OXT O N N 110
CYS H H N N 111
CYS H2 H N N 112
CYS HA H N N 113
CYS HB2 H N N 114
CYS HB3 H N N 115
CYS HG H N N 116
CYS HXT H N N 117
GAL C1 C N R 118
GAL C2 C N R 119
GAL C3 C N S 120
GAL C4 C N R 121
GAL C5 C N R 122
GAL C6 C N N 123
GAL O1 O N N 124
GAL O2 O N N 125
GAL O3 O N N 126
GAL O4 O N N 127
GAL O5 O N N 128
GAL O6 O N N 129
GAL H1 H N N 130
GAL H2 H N N 131
GAL H3 H N N 132
GAL H4 H N N 133
GAL H5 H N N 134
GAL H61 H N N 135
GAL H62 H N N 136
GAL HO1 H N N 137
GAL HO2 H N N 138
GAL HO3 H N N 139
GAL HO4 H N N 140
GAL HO6 H N N 141
GLN N N N N 142
GLN CA C N S 143
GLN C C N N 144
GLN O O N N 145
GLN CB C N N 146
GLN CG C N N 147
GLN CD C N N 148
GLN OE1 O N N 149
GLN NE2 N N N 150
GLN OXT O N N 151
GLN H H N N 152
GLN H2 H N N 153
GLN HA H N N 154
GLN HB2 H N N 155
GLN HB3 H N N 156
GLN HG2 H N N 157
GLN HG3 H N N 158
GLN HE21 H N N 159
GLN HE22 H N N 160
GLN HXT H N N 161
GLU N N N N 162
GLU CA C N S 163
GLU C C N N 164
GLU O O N N 165
GLU CB C N N 166
GLU CG C N N 167
GLU CD C N N 168
GLU OE1 O N N 169
GLU OE2 O N N 170
GLU OXT O N N 171
GLU H H N N 172
GLU H2 H N N 173
GLU HA H N N 174
GLU HB2 H N N 175
GLU HB3 H N N 176
GLU HG2 H N N 177
GLU HG3 H N N 178
GLU HE2 H N N 179
GLU HXT H N N 180
GLY N N N N 181
GLY CA C N N 182
GLY C C N N 183
GLY O O N N 184
GLY OXT O N N 185
GLY H H N N 186
GLY H2 H N N 187
GLY HA2 H N N 188
GLY HA3 H N N 189
GLY HXT H N N 190
HIS N N N N 191
HIS CA C N S 192
HIS C C N N 193
HIS O O N N 194
HIS CB C N N 195
HIS CG C Y N 196
HIS ND1 N Y N 197
HIS CD2 C Y N 198
HIS CE1 C Y N 199
HIS NE2 N Y N 200
HIS OXT O N N 201
HIS H H N N 202
HIS H2 H N N 203
HIS HA H N N 204
HIS HB2 H N N 205
HIS HB3 H N N 206
HIS HD1 H N N 207
HIS HD2 H N N 208
HIS HE1 H N N 209
HIS HE2 H N N 210
HIS HXT H N N 211
HOH O O N N 212
HOH H1 H N N 213
HOH H2 H N N 214
ILE N N N N 215
ILE CA C N S 216
ILE C C N N 217
ILE O O N N 218
ILE CB C N S 219
ILE CG1 C N N 220
ILE CG2 C N N 221
ILE CD1 C N N 222
ILE OXT O N N 223
ILE H H N N 224
ILE H2 H N N 225
ILE HA H N N 226
ILE HB H N N 227
ILE HG12 H N N 228
ILE HG13 H N N 229
ILE HG21 H N N 230
ILE HG22 H N N 231
ILE HG23 H N N 232
ILE HD11 H N N 233
ILE HD12 H N N 234
ILE HD13 H N N 235
ILE HXT H N N 236
LEU N N N N 237
LEU CA C N S 238
LEU C C N N 239
LEU O O N N 240
LEU CB C N N 241
LEU CG C N N 242
LEU CD1 C N N 243
LEU CD2 C N N 244
LEU OXT O N N 245
LEU H H N N 246
LEU H2 H N N 247
LEU HA H N N 248
LEU HB2 H N N 249
LEU HB3 H N N 250
LEU HG H N N 251
LEU HD11 H N N 252
LEU HD12 H N N 253
LEU HD13 H N N 254
LEU HD21 H N N 255
LEU HD22 H N N 256
LEU HD23 H N N 257
LEU HXT H N N 258
LYS N N N N 259
LYS CA C N S 260
LYS C C N N 261
LYS O O N N 262
LYS CB C N N 263
LYS CG C N N 264
LYS CD C N N 265
LYS CE C N N 266
LYS NZ N N N 267
LYS OXT O N N 268
LYS H H N N 269
LYS H2 H N N 270
LYS HA H N N 271
LYS HB2 H N N 272
LYS HB3 H N N 273
LYS HG2 H N N 274
LYS HG3 H N N 275
LYS HD2 H N N 276
LYS HD3 H N N 277
LYS HE2 H N N 278
LYS HE3 H N N 279
LYS HZ1 H N N 280
LYS HZ2 H N N 281
LYS HZ3 H N N 282
LYS HXT H N N 283
MET N N N N 284
MET CA C N S 285
MET C C N N 286
MET O O N N 287
MET CB C N N 288
MET CG C N N 289
MET SD S N N 290
MET CE C N N 291
MET OXT O N N 292
MET H H N N 293
MET H2 H N N 294
MET HA H N N 295
MET HB2 H N N 296
MET HB3 H N N 297
MET HG2 H N N 298
MET HG3 H N N 299
MET HE1 H N N 300
MET HE2 H N N 301
MET HE3 H N N 302
MET HXT H N N 303
NPO C1 C Y N 304
NPO C2 C Y N 305
NPO C3 C Y N 306
NPO C4 C Y N 307
NPO C5 C Y N 308
NPO C6 C Y N 309
NPO OH O N N 310
NPO N1 N N N 311
NPO O2 O N N 312
NPO O3 O N N 313
NPO H2 H N N 314
NPO H3 H N N 315
NPO H5 H N N 316
NPO H6 H N N 317
NPO HO H N N 318
PHE N N N N 319
PHE CA C N S 320
PHE C C N N 321
PHE O O N N 322
PHE CB C N N 323
PHE CG C Y N 324
PHE CD1 C Y N 325
PHE CD2 C Y N 326
PHE CE1 C Y N 327
PHE CE2 C Y N 328
PHE CZ C Y N 329
PHE OXT O N N 330
PHE H H N N 331
PHE H2 H N N 332
PHE HA H N N 333
PHE HB2 H N N 334
PHE HB3 H N N 335
PHE HD1 H N N 336
PHE HD2 H N N 337
PHE HE1 H N N 338
PHE HE2 H N N 339
PHE HZ H N N 340
PHE HXT H N N 341
PRO N N N N 342
PRO CA C N S 343
PRO C C N N 344
PRO O O N N 345
PRO CB C N N 346
PRO CG C N N 347
PRO CD C N N 348
PRO OXT O N N 349
PRO H H N N 350
PRO HA H N N 351
PRO HB2 H N N 352
PRO HB3 H N N 353
PRO HG2 H N N 354
PRO HG3 H N N 355
PRO HD2 H N N 356
PRO HD3 H N N 357
PRO HXT H N N 358
SER N N N N 359
SER CA C N S 360
SER C C N N 361
SER O O N N 362
SER CB C N N 363
SER OG O N N 364
SER OXT O N N 365
SER H H N N 366
SER H2 H N N 367
SER HA H N N 368
SER HB2 H N N 369
SER HB3 H N N 370
SER HG H N N 371
SER HXT H N N 372
SO4 S S N N 373
SO4 O1 O N N 374
SO4 O2 O N N 375
SO4 O3 O N N 376
SO4 O4 O N N 377
THR N N N N 378
THR CA C N S 379
THR C C N N 380
THR O O N N 381
THR CB C N R 382
THR OG1 O N N 383
THR CG2 C N N 384
THR OXT O N N 385
THR H H N N 386
THR H2 H N N 387
THR HA H N N 388
THR HB H N N 389
THR HG1 H N N 390
THR HG21 H N N 391
THR HG22 H N N 392
THR HG23 H N N 393
THR HXT H N N 394
TRP N N N N 395
TRP CA C N S 396
TRP C C N N 397
TRP O O N N 398
TRP CB C N N 399
TRP CG C Y N 400
TRP CD1 C Y N 401
TRP CD2 C Y N 402
TRP NE1 N Y N 403
TRP CE2 C Y N 404
TRP CE3 C Y N 405
TRP CZ2 C Y N 406
TRP CZ3 C Y N 407
TRP CH2 C Y N 408
TRP OXT O N N 409
TRP H H N N 410
TRP H2 H N N 411
TRP HA H N N 412
TRP HB2 H N N 413
TRP HB3 H N N 414
TRP HD1 H N N 415
TRP HE1 H N N 416
TRP HE3 H N N 417
TRP HZ2 H N N 418
TRP HZ3 H N N 419
TRP HH2 H N N 420
TRP HXT H N N 421
TYR N N N N 422
TYR CA C N S 423
TYR C C N N 424
TYR O O N N 425
TYR CB C N N 426
TYR CG C Y N 427
TYR CD1 C Y N 428
TYR CD2 C Y N 429
TYR CE1 C Y N 430
TYR CE2 C Y N 431
TYR CZ C Y N 432
TYR OH O N N 433
TYR OXT O N N 434
TYR H H N N 435
TYR H2 H N N 436
TYR HA H N N 437
TYR HB2 H N N 438
TYR HB3 H N N 439
TYR HD1 H N N 440
TYR HD2 H N N 441
TYR HE1 H N N 442
TYR HE2 H N N 443
TYR HH H N N 444
TYR HXT H N N 445
VAL N N N N 446
VAL CA C N S 447
VAL C C N N 448
VAL O O N N 449
VAL CB C N N 450
VAL CG1 C N N 451
VAL CG2 C N N 452
VAL OXT O N N 453
VAL H H N N 454
VAL H2 H N N 455
VAL HA H N N 456
VAL HB H N N 457
VAL HG11 H N N 458
VAL HG12 H N N 459
VAL HG13 H N N 460
VAL HG21 H N N 461
VAL HG22 H N N 462
VAL HG23 H N N 463
VAL HXT H N N 464
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
A2G O5 C5 sing N N 1
A2G C1 O5 sing N N 2
A2G C1 C2 sing N N 3
A2G C1 H1 sing N N 4
A2G O1 C1 sing N N 5
A2G O1 HO1 sing N N 6
A2G C2 C3 sing N N 7
A2G C2 H2 sing N N 8
A2G N2 C2 sing N N 9
A2G N2 HN2 sing N N 10
A2G C3 C4 sing N N 11
A2G C3 O3 sing N N 12
A2G C3 H3 sing N N 13
A2G O3 HO3 sing N N 14
A2G C4 O4 sing N N 15
A2G C4 H4 sing N N 16
A2G O4 HO4 sing N N 17
A2G C5 C4 sing N N 18
A2G C5 C6 sing N N 19
A2G C5 H5 sing N N 20
A2G C6 O6 sing N N 21
A2G C6 H61 sing N N 22
A2G C7 N2 sing N N 23
A2G O7 C7 doub N N 24
A2G C8 C7 sing N N 25
A2G C8 H81 sing N N 26
A2G C8 H82 sing N N 27
A2G C8 H83 sing N N 28
A2G C6 H62 sing N N 29
A2G O6 HO6 sing N N 30
ALA N CA sing N N 31
ALA N H sing N N 32
ALA N H2 sing N N 33
ALA CA C sing N N 34
ALA CA CB sing N N 35
ALA CA HA sing N N 36
ALA C O doub N N 37
ALA C OXT sing N N 38
ALA CB HB1 sing N N 39
ALA CB HB2 sing N N 40
ALA CB HB3 sing N N 41
ALA OXT HXT sing N N 42
ARG N CA sing N N 43
ARG N H sing N N 44
ARG N H2 sing N N 45
ARG CA C sing N N 46
ARG CA CB sing N N 47
ARG CA HA sing N N 48
ARG C O doub N N 49
ARG C OXT sing N N 50
ARG CB CG sing N N 51
ARG CB HB2 sing N N 52
ARG CB HB3 sing N N 53
ARG CG CD sing N N 54
ARG CG HG2 sing N N 55
ARG CG HG3 sing N N 56
ARG CD NE sing N N 57
ARG CD HD2 sing N N 58
ARG CD HD3 sing N N 59
ARG NE CZ sing N N 60
ARG NE HE sing N N 61
ARG CZ NH1 sing N N 62
ARG CZ NH2 doub N N 63
ARG NH1 HH11 sing N N 64
ARG NH1 HH12 sing N N 65
ARG NH2 HH21 sing N N 66
ARG NH2 HH22 sing N N 67
ARG OXT HXT sing N N 68
ASN N CA sing N N 69
ASN N H sing N N 70
ASN N H2 sing N N 71
ASN CA C sing N N 72
ASN CA CB sing N N 73
ASN CA HA sing N N 74
ASN C O doub N N 75
ASN C OXT sing N N 76
ASN CB CG sing N N 77
ASN CB HB2 sing N N 78
ASN CB HB3 sing N N 79
ASN CG OD1 doub N N 80
ASN CG ND2 sing N N 81
ASN ND2 HD21 sing N N 82
ASN ND2 HD22 sing N N 83
ASN OXT HXT sing N N 84
ASP N CA sing N N 85
ASP N H sing N N 86
ASP N H2 sing N N 87
ASP CA C sing N N 88
ASP CA CB sing N N 89
ASP CA HA sing N N 90
ASP C O doub N N 91
ASP C OXT sing N N 92
ASP CB CG sing N N 93
ASP CB HB2 sing N N 94
ASP CB HB3 sing N N 95
ASP CG OD1 doub N N 96
ASP CG OD2 sing N N 97
ASP OD2 HD2 sing N N 98
ASP OXT HXT sing N N 99
CYS N CA sing N N 100
CYS N H sing N N 101
CYS N H2 sing N N 102
CYS CA C sing N N 103
CYS CA CB sing N N 104
CYS CA HA sing N N 105
CYS C O doub N N 106
CYS C OXT sing N N 107
CYS CB SG sing N N 108
CYS CB HB2 sing N N 109
CYS CB HB3 sing N N 110
CYS SG HG sing N N 111
CYS OXT HXT sing N N 112
GAL C1 C2 sing N N 113
GAL C1 O1 sing N N 114
GAL C1 O5 sing N N 115
GAL C1 H1 sing N N 116
GAL C2 C3 sing N N 117
GAL C2 O2 sing N N 118
GAL C2 H2 sing N N 119
GAL C3 C4 sing N N 120
GAL C3 O3 sing N N 121
GAL C3 H3 sing N N 122
GAL C4 C5 sing N N 123
GAL C4 O4 sing N N 124
GAL C4 H4 sing N N 125
GAL C5 C6 sing N N 126
GAL C5 O5 sing N N 127
GAL C5 H5 sing N N 128
GAL C6 O6 sing N N 129
GAL C6 H61 sing N N 130
GAL C6 H62 sing N N 131
GAL O1 HO1 sing N N 132
GAL O2 HO2 sing N N 133
GAL O3 HO3 sing N N 134
GAL O4 HO4 sing N N 135
GAL O6 HO6 sing N N 136
GLN N CA sing N N 137
GLN N H sing N N 138
GLN N H2 sing N N 139
GLN CA C sing N N 140
GLN CA CB sing N N 141
GLN CA HA sing N N 142
GLN C O doub N N 143
GLN C OXT sing N N 144
GLN CB CG sing N N 145
GLN CB HB2 sing N N 146
GLN CB HB3 sing N N 147
GLN CG CD sing N N 148
GLN CG HG2 sing N N 149
GLN CG HG3 sing N N 150
GLN CD OE1 doub N N 151
GLN CD NE2 sing N N 152
GLN NE2 HE21 sing N N 153
GLN NE2 HE22 sing N N 154
GLN OXT HXT sing N N 155
GLU N CA sing N N 156
GLU N H sing N N 157
GLU N H2 sing N N 158
GLU CA C sing N N 159
GLU CA CB sing N N 160
GLU CA HA sing N N 161
GLU C O doub N N 162
GLU C OXT sing N N 163
GLU CB CG sing N N 164
GLU CB HB2 sing N N 165
GLU CB HB3 sing N N 166
GLU CG CD sing N N 167
GLU CG HG2 sing N N 168
GLU CG HG3 sing N N 169
GLU CD OE1 doub N N 170
GLU CD OE2 sing N N 171
GLU OE2 HE2 sing N N 172
GLU OXT HXT sing N N 173
GLY N CA sing N N 174
GLY N H sing N N 175
GLY N H2 sing N N 176
GLY CA C sing N N 177
GLY CA HA2 sing N N 178
GLY CA HA3 sing N N 179
GLY C O doub N N 180
GLY C OXT sing N N 181
GLY OXT HXT sing N N 182
HIS N CA sing N N 183
HIS N H sing N N 184
HIS N H2 sing N N 185
HIS CA C sing N N 186
HIS CA CB sing N N 187
HIS CA HA sing N N 188
HIS C O doub N N 189
HIS C OXT sing N N 190
HIS CB CG sing N N 191
HIS CB HB2 sing N N 192
HIS CB HB3 sing N N 193
HIS CG ND1 sing Y N 194
HIS CG CD2 doub Y N 195
HIS ND1 CE1 doub Y N 196
HIS ND1 HD1 sing N N 197
HIS CD2 NE2 sing Y N 198
HIS CD2 HD2 sing N N 199
HIS CE1 NE2 sing Y N 200
HIS CE1 HE1 sing N N 201
HIS NE2 HE2 sing N N 202
HIS OXT HXT sing N N 203
HOH O H1 sing N N 204
HOH O H2 sing N N 205
ILE N CA sing N N 206
ILE N H sing N N 207
ILE N H2 sing N N 208
ILE CA C sing N N 209
ILE CA CB sing N N 210
ILE CA HA sing N N 211
ILE C O doub N N 212
ILE C OXT sing N N 213
ILE CB CG1 sing N N 214
ILE CB CG2 sing N N 215
ILE CB HB sing N N 216
ILE CG1 CD1 sing N N 217
ILE CG1 HG12 sing N N 218
ILE CG1 HG13 sing N N 219
ILE CG2 HG21 sing N N 220
ILE CG2 HG22 sing N N 221
ILE CG2 HG23 sing N N 222
ILE CD1 HD11 sing N N 223
ILE CD1 HD12 sing N N 224
ILE CD1 HD13 sing N N 225
ILE OXT HXT sing N N 226
LEU N CA sing N N 227
LEU N H sing N N 228
LEU N H2 sing N N 229
LEU CA C sing N N 230
LEU CA CB sing N N 231
LEU CA HA sing N N 232
LEU C O doub N N 233
LEU C OXT sing N N 234
LEU CB CG sing N N 235
LEU CB HB2 sing N N 236
LEU CB HB3 sing N N 237
LEU CG CD1 sing N N 238
LEU CG CD2 sing N N 239
LEU CG HG sing N N 240
LEU CD1 HD11 sing N N 241
LEU CD1 HD12 sing N N 242
LEU CD1 HD13 sing N N 243
LEU CD2 HD21 sing N N 244
LEU CD2 HD22 sing N N 245
LEU CD2 HD23 sing N N 246
LEU OXT HXT sing N N 247
LYS N CA sing N N 248
LYS N H sing N N 249
LYS N H2 sing N N 250
LYS CA C sing N N 251
LYS CA CB sing N N 252
LYS CA HA sing N N 253
LYS C O doub N N 254
LYS C OXT sing N N 255
LYS CB CG sing N N 256
LYS CB HB2 sing N N 257
LYS CB HB3 sing N N 258
LYS CG CD sing N N 259
LYS CG HG2 sing N N 260
LYS CG HG3 sing N N 261
LYS CD CE sing N N 262
LYS CD HD2 sing N N 263
LYS CD HD3 sing N N 264
LYS CE NZ sing N N 265
LYS CE HE2 sing N N 266
LYS CE HE3 sing N N 267
LYS NZ HZ1 sing N N 268
LYS NZ HZ2 sing N N 269
LYS NZ HZ3 sing N N 270
LYS OXT HXT sing N N 271
MET N CA sing N N 272
MET N H sing N N 273
MET N H2 sing N N 274
MET CA C sing N N 275
MET CA CB sing N N 276
MET CA HA sing N N 277
MET C O doub N N 278
MET C OXT sing N N 279
MET CB CG sing N N 280
MET CB HB2 sing N N 281
MET CB HB3 sing N N 282
MET CG SD sing N N 283
MET CG HG2 sing N N 284
MET CG HG3 sing N N 285
MET SD CE sing N N 286
MET CE HE1 sing N N 287
MET CE HE2 sing N N 288
MET CE HE3 sing N N 289
MET OXT HXT sing N N 290
NPO C1 C2 doub Y N 291
NPO C1 C6 sing Y N 292
NPO C1 N1 sing N N 293
NPO C2 C3 sing Y N 294
NPO C2 H2 sing N N 295
NPO C3 C4 doub Y N 296
NPO C3 H3 sing N N 297
NPO C4 C5 sing Y N 298
NPO C4 OH sing N N 299
NPO C5 C6 doub Y N 300
NPO C5 H5 sing N N 301
NPO C6 H6 sing N N 302
NPO OH HO sing N N 303
NPO N1 O2 sing N N 304
NPO N1 O3 doub N N 305
PHE N CA sing N N 306
PHE N H sing N N 307
PHE N H2 sing N N 308
PHE CA C sing N N 309
PHE CA CB sing N N 310
PHE CA HA sing N N 311
PHE C O doub N N 312
PHE C OXT sing N N 313
PHE CB CG sing N N 314
PHE CB HB2 sing N N 315
PHE CB HB3 sing N N 316
PHE CG CD1 doub Y N 317
PHE CG CD2 sing Y N 318
PHE CD1 CE1 sing Y N 319
PHE CD1 HD1 sing N N 320
PHE CD2 CE2 doub Y N 321
PHE CD2 HD2 sing N N 322
PHE CE1 CZ doub Y N 323
PHE CE1 HE1 sing N N 324
PHE CE2 CZ sing Y N 325
PHE CE2 HE2 sing N N 326
PHE CZ HZ sing N N 327
PHE OXT HXT sing N N 328
PRO N CA sing N N 329
PRO N CD sing N N 330
PRO N H sing N N 331
PRO CA C sing N N 332
PRO CA CB sing N N 333
PRO CA HA sing N N 334
PRO C O doub N N 335
PRO C OXT sing N N 336
PRO CB CG sing N N 337
PRO CB HB2 sing N N 338
PRO CB HB3 sing N N 339
PRO CG CD sing N N 340
PRO CG HG2 sing N N 341
PRO CG HG3 sing N N 342
PRO CD HD2 sing N N 343
PRO CD HD3 sing N N 344
PRO OXT HXT sing N N 345
SER N CA sing N N 346
SER N H sing N N 347
SER N H2 sing N N 348
SER CA C sing N N 349
SER CA CB sing N N 350
SER CA HA sing N N 351
SER C O doub N N 352
SER C OXT sing N N 353
SER CB OG sing N N 354
SER CB HB2 sing N N 355
SER CB HB3 sing N N 356
SER OG HG sing N N 357
SER OXT HXT sing N N 358
SO4 S O1 doub N N 359
SO4 S O2 doub N N 360
SO4 S O3 sing N N 361
SO4 S O4 sing N N 362
THR N CA sing N N 363
THR N H sing N N 364
THR N H2 sing N N 365
THR CA C sing N N 366
THR CA CB sing N N 367
THR CA HA sing N N 368
THR C O doub N N 369
THR C OXT sing N N 370
THR CB OG1 sing N N 371
THR CB CG2 sing N N 372
THR CB HB sing N N 373
THR OG1 HG1 sing N N 374
THR CG2 HG21 sing N N 375
THR CG2 HG22 sing N N 376
THR CG2 HG23 sing N N 377
THR OXT HXT sing N N 378
TRP N CA sing N N 379
TRP N H sing N N 380
TRP N H2 sing N N 381
TRP CA C sing N N 382
TRP CA CB sing N N 383
TRP CA HA sing N N 384
TRP C O doub N N 385
TRP C OXT sing N N 386
TRP CB CG sing N N 387
TRP CB HB2 sing N N 388
TRP CB HB3 sing N N 389
TRP CG CD1 doub Y N 390
TRP CG CD2 sing Y N 391
TRP CD1 NE1 sing Y N 392
TRP CD1 HD1 sing N N 393
TRP CD2 CE2 doub Y N 394
TRP CD2 CE3 sing Y N 395
TRP NE1 CE2 sing Y N 396
TRP NE1 HE1 sing N N 397
TRP CE2 CZ2 sing Y N 398
TRP CE3 CZ3 doub Y N 399
TRP CE3 HE3 sing N N 400
TRP CZ2 CH2 doub Y N 401
TRP CZ2 HZ2 sing N N 402
TRP CZ3 CH2 sing Y N 403
TRP CZ3 HZ3 sing N N 404
TRP CH2 HH2 sing N N 405
TRP OXT HXT sing N N 406
TYR N CA sing N N 407
TYR N H sing N N 408
TYR N H2 sing N N 409
TYR CA C sing N N 410
TYR CA CB sing N N 411
TYR CA HA sing N N 412
TYR C O doub N N 413
TYR C OXT sing N N 414
TYR CB CG sing N N 415
TYR CB HB2 sing N N 416
TYR CB HB3 sing N N 417
TYR CG CD1 doub Y N 418
TYR CG CD2 sing Y N 419
TYR CD1 CE1 sing Y N 420
TYR CD1 HD1 sing N N 421
TYR CD2 CE2 doub Y N 422
TYR CD2 HD2 sing N N 423
TYR CE1 CZ doub Y N 424
TYR CE1 HE1 sing N N 425
TYR CE2 CZ sing Y N 426
TYR CE2 HE2 sing N N 427
TYR CZ OH sing N N 428
TYR OH HH sing N N 429
TYR OXT HXT sing N N 430
VAL N CA sing N N 431
VAL N H sing N N 432
VAL N H2 sing N N 433
VAL CA C sing N N 434
VAL CA CB sing N N 435
VAL CA HA sing N N 436
VAL C O doub N N 437
VAL C OXT sing N N 438
VAL CB CG1 sing N N 439
VAL CB CG2 sing N N 440
VAL CB HB sing N N 441
VAL CG1 HG11 sing N N 442
VAL CG1 HG12 sing N N 443
VAL CG1 HG13 sing N N 444
VAL CG2 HG21 sing N N 445
VAL CG2 HG22 sing N N 446
VAL CG2 HG23 sing N N 447
VAL OXT HXT sing N N 448
#
loop_
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_mon_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.hetero
B 2 A2G 1 B A2G 1 B TFN 251 n
B 2 GAL 2 B GAL 2 B TFN 251 n
C 2 A2G 1 C A2G 1 C TFN 252 n
C 2 GAL 2 C GAL 2 C TFN 252 n
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
A2G 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpNAca
A2G 'COMMON NAME' GMML 1.0 N-acetyl-a-D-galactopyranosamine
A2G 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GalpNAc
A2G 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GalNAc
GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb
GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose
GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp
GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal
#
_pdbx_entity_branch.entity_id 2
_pdbx_entity_branch.type oligosaccharide
#
loop_
_pdbx_entity_branch_descriptor.ordinal
_pdbx_entity_branch_descriptor.entity_id
_pdbx_entity_branch_descriptor.descriptor
_pdbx_entity_branch_descriptor.type
_pdbx_entity_branch_descriptor.program
_pdbx_entity_branch_descriptor.program_version
1 2 DGalpb1-3DGalpNAca1-ROH 'Glycam Condensed Sequence' GMML 1.0
2 2 'WURCS=2.0/2,2,1/[a2112h-1a_1-5_2*NCC/3=O][a2112h-1b_1-5]/1-2/a3-b1' WURCS PDB2Glycan 1.1.0
3 2 '[][D-1-deoxy-GalpNAc]{[(3+1)][b-D-Galp]{}}' LINUCS PDB-CARE ?
#
_pdbx_entity_branch_link.link_id 1
_pdbx_entity_branch_link.entity_id 2
_pdbx_entity_branch_link.entity_branch_list_num_1 2
_pdbx_entity_branch_link.comp_id_1 GAL
_pdbx_entity_branch_link.atom_id_1 C1
_pdbx_entity_branch_link.leaving_atom_id_1 O1
_pdbx_entity_branch_link.entity_branch_list_num_2 1
_pdbx_entity_branch_link.comp_id_2 A2G
_pdbx_entity_branch_link.atom_id_2 O3
_pdbx_entity_branch_link.leaving_atom_id_2 HO3
_pdbx_entity_branch_link.value_order sing
_pdbx_entity_branch_link.details ?
#
loop_
_pdbx_entity_branch_list.entity_id
_pdbx_entity_branch_list.comp_id
_pdbx_entity_branch_list.num
_pdbx_entity_branch_list.hetero
2 A2G 1 n
2 GAL 2 n
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
3 P-NITROPHENOL NPO
4 'SULFATE ION' SO4
5 water HOH
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 2NN8
_pdbx_initial_refinement_model.details 'PDB ENTRY 2NN8'
#