HEADER HYDROLASE 03-JUN-11 3AZX TITLE CRYSTAL STRUCTURE OF THE LAMINARINASE CATALYTIC DOMAIN FROM THERMOTOGA TITLE 2 MARITIMA MSB8 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LAMINARINASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 204-466; COMPND 5 EC: 3.2.1.39; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 243274; SOURCE 4 STRAIN: MSB8, ATCC43589; SOURCE 5 GENE: TM_0024; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL-21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-21A KEYWDS BETA-JELLY ROLL FOLD, GLYCOSYL HYDROLASE FAMILY 16, LAMINARINASE, KEYWDS 2 ENDO-1, 3-BETA-GLUCANASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR W.Y.JENG,N.C.WANG,A.H.J.WANG REVDAT 3 01-NOV-23 3AZX 1 REMARK SEQADV LINK REVDAT 2 19-JUN-13 3AZX 1 JRNL REVDAT 1 23-NOV-11 3AZX 0 JRNL AUTH W.Y.JENG,N.C.WANG,C.T.LIN,L.F.SHYUR,A.H.WANG JRNL TITL CRYSTAL STRUCTURES OF THE LAMINARINASE CATALYTIC DOMAIN FROM JRNL TITL 2 THERMOTOGA MARITIMA MSB8 IN COMPLEX WITH INHIBITORS: JRNL TITL 3 ESSENTIAL RESIDUES FOR BETA-1,3 AND BETA-1,4 GLUCAN JRNL TITL 4 SELECTION. JRNL REF J.BIOL.CHEM. V. 286 45030 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 22065588 JRNL DOI 10.1074/JBC.M111.271213 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.60 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 62297 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3167 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 8207 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.60 REMARK 3 BIN R VALUE (WORKING SET) : 0.2880 REMARK 3 BIN FREE R VALUE SET COUNT : 392 REMARK 3 BIN FREE R VALUE : 0.3660 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4080 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 359 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.10000 REMARK 3 B22 (A**2) : 1.78000 REMARK 3 B33 (A**2) : -0.83000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.30000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.125 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.098 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.906 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4214 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5740 ; 1.394 ; 1.925 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 502 ; 7.145 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 224 ;34.527 ;24.911 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 636 ;12.659 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;16.273 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 566 ; 0.105 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3366 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2482 ; 1.226 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3988 ; 1.983 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1732 ; 3.169 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1752 ; 4.587 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4214 ; 1.630 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7 A 258 REMARK 3 ORIGIN FOR THE GROUP (A): 14.1520 9.9667 12.3434 REMARK 3 T TENSOR REMARK 3 T11: 0.0299 T22: 0.0201 REMARK 3 T33: 0.0308 T12: 0.0045 REMARK 3 T13: -0.0189 T23: -0.0092 REMARK 3 L TENSOR REMARK 3 L11: 1.1469 L22: 0.6949 REMARK 3 L33: 1.6607 L12: 0.0694 REMARK 3 L13: 0.0860 L23: -0.1240 REMARK 3 S TENSOR REMARK 3 S11: -0.1286 S12: -0.0939 S13: 0.1104 REMARK 3 S21: 0.0487 S22: 0.0044 S23: -0.0593 REMARK 3 S31: -0.0651 S32: 0.0716 S33: 0.1242 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 7 B 258 REMARK 3 ORIGIN FOR THE GROUP (A): -1.7356 -0.1109 49.0813 REMARK 3 T TENSOR REMARK 3 T11: 0.0380 T22: 0.0406 REMARK 3 T33: 0.0201 T12: 0.0206 REMARK 3 T13: 0.0197 T23: 0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.6932 L22: 0.7063 REMARK 3 L33: 1.5338 L12: 0.2070 REMARK 3 L13: 0.0167 L23: 0.0612 REMARK 3 S TENSOR REMARK 3 S11: -0.0391 S12: 0.0094 S13: 0.0230 REMARK 3 S21: -0.0596 S22: -0.0403 S23: -0.0074 REMARK 3 S31: 0.0789 S32: 0.0329 S33: 0.0794 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3AZX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-JUN-11. REMARK 100 THE DEPOSITION ID IS D_1000029903. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : LN2-COOLED FIXED-EXIT DOUBLE REMARK 200 CRYSTAL SI(111) MONOCHROMATOR REMARK 200 OPTICS : VERTICALLY COLLIMATING REMARK 200 PREMIRROR, TOROIDAL FOCUSING REMARK 200 MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62313 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.49600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2HYK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10-15% (W/V) PEG 8000, 0.25-0.45 M REMARK 280 KH2PO4, 20% GLYCEROL, 10MM CACL2, PH 8.0, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 50.28350 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.07600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 50.28350 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.07600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 ASP A 3 REMARK 465 GLU A 4 REMARK 465 ASP A 5 REMARK 465 LYS A 6 REMARK 465 PRO A 259 REMARK 465 GLU A 260 REMARK 465 THR A 261 REMARK 465 ILE A 262 REMARK 465 THR A 263 REMARK 465 GLY A 264 REMARK 465 VAL A 265 REMARK 465 GLU A 266 REMARK 465 HIS A 267 REMARK 465 HIS A 268 REMARK 465 HIS A 269 REMARK 465 HIS A 270 REMARK 465 HIS A 271 REMARK 465 HIS A 272 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 ASP B 3 REMARK 465 GLU B 4 REMARK 465 ASP B 5 REMARK 465 LYS B 6 REMARK 465 PRO B 259 REMARK 465 GLU B 260 REMARK 465 THR B 261 REMARK 465 ILE B 262 REMARK 465 THR B 263 REMARK 465 GLY B 264 REMARK 465 VAL B 265 REMARK 465 GLU B 266 REMARK 465 HIS B 267 REMARK 465 HIS B 268 REMARK 465 HIS B 269 REMARK 465 HIS B 270 REMARK 465 HIS B 271 REMARK 465 HIS B 272 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 606 O HOH A 621 2.03 REMARK 500 OD2 ASP B 19 O HOH B 464 2.10 REMARK 500 OG SER A 156 O HOH A 418 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 445 O HOH A 615 4545 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 20 -104.43 -127.96 REMARK 500 GLU A 75 -7.73 -59.59 REMARK 500 TYR A 96 140.10 83.47 REMARK 500 ASP A 217 20.64 -142.21 REMARK 500 ASP A 237 -159.73 -129.26 REMARK 500 TRP B 43 19.62 50.99 REMARK 500 GLU B 54 38.28 -141.12 REMARK 500 TYR B 96 142.67 80.33 REMARK 500 TYR B 155 65.27 -152.61 REMARK 500 PHE B 216 60.37 -101.87 REMARK 500 ASP B 217 22.83 -143.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 17 O REMARK 620 2 ASP A 19 OD1 70.6 REMARK 620 3 GLY A 61 O 96.5 91.6 REMARK 620 4 ASP A 249 OD1 146.6 142.3 89.8 REMARK 620 5 ASP A 249 O 73.5 143.8 88.3 73.9 REMARK 620 6 HOH A 429 O 146.6 76.1 85.9 66.4 139.9 REMARK 620 7 HOH A 546 O 95.8 91.0 167.6 80.8 96.7 83.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 17 O REMARK 620 2 ASP B 19 OD1 71.2 REMARK 620 3 GLY B 61 O 91.8 88.7 REMARK 620 4 ASP B 249 OD1 147.6 140.5 95.0 REMARK 620 5 ASP B 249 O 71.0 141.8 87.9 77.7 REMARK 620 6 HOH B 507 O 93.4 92.2 174.7 81.0 94.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3AZY RELATED DB: PDB REMARK 900 RELATED ID: 3AZZ RELATED DB: PDB REMARK 900 RELATED ID: 3B00 RELATED DB: PDB REMARK 900 RELATED ID: 3B01 RELATED DB: PDB DBREF 3AZX A 2 264 UNP Q9WXN1 Q9WXN1_THEMA 204 466 DBREF 3AZX B 2 264 UNP Q9WXN1 Q9WXN1_THEMA 204 466 SEQADV 3AZX MET A 1 UNP Q9WXN1 EXPRESSION TAG SEQADV 3AZX VAL A 265 UNP Q9WXN1 EXPRESSION TAG SEQADV 3AZX GLU A 266 UNP Q9WXN1 EXPRESSION TAG SEQADV 3AZX HIS A 267 UNP Q9WXN1 EXPRESSION TAG SEQADV 3AZX HIS A 268 UNP Q9WXN1 EXPRESSION TAG SEQADV 3AZX HIS A 269 UNP Q9WXN1 EXPRESSION TAG SEQADV 3AZX HIS A 270 UNP Q9WXN1 EXPRESSION TAG SEQADV 3AZX HIS A 271 UNP Q9WXN1 EXPRESSION TAG SEQADV 3AZX HIS A 272 UNP Q9WXN1 EXPRESSION TAG SEQADV 3AZX MET B 1 UNP Q9WXN1 EXPRESSION TAG SEQADV 3AZX VAL B 265 UNP Q9WXN1 EXPRESSION TAG SEQADV 3AZX GLU B 266 UNP Q9WXN1 EXPRESSION TAG SEQADV 3AZX HIS B 267 UNP Q9WXN1 EXPRESSION TAG SEQADV 3AZX HIS B 268 UNP Q9WXN1 EXPRESSION TAG SEQADV 3AZX HIS B 269 UNP Q9WXN1 EXPRESSION TAG SEQADV 3AZX HIS B 270 UNP Q9WXN1 EXPRESSION TAG SEQADV 3AZX HIS B 271 UNP Q9WXN1 EXPRESSION TAG SEQADV 3AZX HIS B 272 UNP Q9WXN1 EXPRESSION TAG SEQRES 1 A 272 MET GLU ASP GLU ASP LYS VAL GLU ASP TRP GLN LEU VAL SEQRES 2 A 272 TRP SER GLN GLU PHE ASP ASP GLY VAL ILE ASP PRO ASN SEQRES 3 A 272 ILE TRP ASN PHE GLU ILE GLY ASN GLY HIS ALA LYS GLY SEQRES 4 A 272 ILE PRO GLY TRP GLY ASN GLY GLU LEU GLU TYR TYR THR SEQRES 5 A 272 ASP GLU ASN ALA PHE VAL GLU ASN GLY CYS LEU VAL ILE SEQRES 6 A 272 GLU ALA ARG LYS GLU GLN VAL SER ASP GLU TYR GLY THR SEQRES 7 A 272 TYR ASP TYR THR SER ALA ARG MET THR THR GLU GLY LYS SEQRES 8 A 272 PHE GLU ILE LYS TYR GLY LYS ILE GLU ILE ARG ALA LYS SEQRES 9 A 272 LEU PRO LYS GLY LYS GLY ILE TRP PRO ALA LEU TRP MET SEQRES 10 A 272 LEU GLY ASN ASN ILE GLY GLU VAL GLY TRP PRO THR CYS SEQRES 11 A 272 GLY GLU ILE ASP ILE MET GLU MET LEU GLY HIS ASP THR SEQRES 12 A 272 ARG THR VAL TYR GLY THR ALA HIS GLY PRO GLY TYR SER SEQRES 13 A 272 GLY GLY ALA SER ILE GLY VAL ALA TYR HIS LEU PRO GLU SEQRES 14 A 272 GLY VAL PRO ASP PHE SER GLU ASP PHE HIS ILE PHE SER SEQRES 15 A 272 ILE GLU TRP ASP GLU ASP GLU VAL GLU TRP TYR VAL ASP SEQRES 16 A 272 GLY GLN LEU TYR HIS VAL LEU SER LYS ASP GLU LEU ALA SEQRES 17 A 272 GLU LEU GLY LEU GLU TRP VAL PHE ASP HIS PRO PHE PHE SEQRES 18 A 272 LEU ILE LEU ASN VAL ALA VAL GLY GLY TYR TRP PRO GLY SEQRES 19 A 272 TYR PRO ASP GLU THR THR GLN PHE PRO GLN ARG MET TYR SEQRES 20 A 272 ILE ASP TYR ILE ARG VAL TYR LYS ASP MET ASN PRO GLU SEQRES 21 A 272 THR ILE THR GLY VAL GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 272 MET GLU ASP GLU ASP LYS VAL GLU ASP TRP GLN LEU VAL SEQRES 2 B 272 TRP SER GLN GLU PHE ASP ASP GLY VAL ILE ASP PRO ASN SEQRES 3 B 272 ILE TRP ASN PHE GLU ILE GLY ASN GLY HIS ALA LYS GLY SEQRES 4 B 272 ILE PRO GLY TRP GLY ASN GLY GLU LEU GLU TYR TYR THR SEQRES 5 B 272 ASP GLU ASN ALA PHE VAL GLU ASN GLY CYS LEU VAL ILE SEQRES 6 B 272 GLU ALA ARG LYS GLU GLN VAL SER ASP GLU TYR GLY THR SEQRES 7 B 272 TYR ASP TYR THR SER ALA ARG MET THR THR GLU GLY LYS SEQRES 8 B 272 PHE GLU ILE LYS TYR GLY LYS ILE GLU ILE ARG ALA LYS SEQRES 9 B 272 LEU PRO LYS GLY LYS GLY ILE TRP PRO ALA LEU TRP MET SEQRES 10 B 272 LEU GLY ASN ASN ILE GLY GLU VAL GLY TRP PRO THR CYS SEQRES 11 B 272 GLY GLU ILE ASP ILE MET GLU MET LEU GLY HIS ASP THR SEQRES 12 B 272 ARG THR VAL TYR GLY THR ALA HIS GLY PRO GLY TYR SER SEQRES 13 B 272 GLY GLY ALA SER ILE GLY VAL ALA TYR HIS LEU PRO GLU SEQRES 14 B 272 GLY VAL PRO ASP PHE SER GLU ASP PHE HIS ILE PHE SER SEQRES 15 B 272 ILE GLU TRP ASP GLU ASP GLU VAL GLU TRP TYR VAL ASP SEQRES 16 B 272 GLY GLN LEU TYR HIS VAL LEU SER LYS ASP GLU LEU ALA SEQRES 17 B 272 GLU LEU GLY LEU GLU TRP VAL PHE ASP HIS PRO PHE PHE SEQRES 18 B 272 LEU ILE LEU ASN VAL ALA VAL GLY GLY TYR TRP PRO GLY SEQRES 19 B 272 TYR PRO ASP GLU THR THR GLN PHE PRO GLN ARG MET TYR SEQRES 20 B 272 ILE ASP TYR ILE ARG VAL TYR LYS ASP MET ASN PRO GLU SEQRES 21 B 272 THR ILE THR GLY VAL GLU HIS HIS HIS HIS HIS HIS HET CA A 301 1 HET CA B 301 1 HETNAM CA CALCIUM ION FORMUL 3 CA 2(CA 2+) FORMUL 5 HOH *359(H2 O) HELIX 1 1 GLY A 35 GLY A 39 5 5 HELIX 2 2 ILE A 40 ASN A 45 5 6 HELIX 3 3 ASN A 121 GLY A 126 1 6 HELIX 4 4 SER A 156 SER A 160 5 5 HELIX 5 5 LYS A 204 LEU A 210 1 7 HELIX 6 6 GLY B 35 GLY B 39 5 5 HELIX 7 7 ILE B 40 ASN B 45 5 6 HELIX 8 8 ASN B 121 GLY B 126 1 6 HELIX 9 9 SER B 156 SER B 160 5 5 HELIX 10 10 LYS B 204 LEU B 210 1 7 SHEET 1 A 4 TRP A 10 GLN A 16 0 SHEET 2 A 4 GLN A 244 ASP A 256 -1 O VAL A 253 N TRP A 14 SHEET 3 A 4 CYS A 62 ASP A 74 -1 N LEU A 63 O ILE A 248 SHEET 4 A 4 ALA A 56 GLU A 59 -1 N PHE A 57 O VAL A 64 SHEET 1 B 8 GLU A 49 TYR A 51 0 SHEET 2 B 8 GLY A 77 SER A 83 1 O TYR A 81 N TYR A 50 SHEET 3 B 8 CYS A 62 ASP A 74 -1 N VAL A 72 O TYR A 79 SHEET 4 B 8 GLN A 244 ASP A 256 -1 O ILE A 248 N LEU A 63 SHEET 5 B 8 GLY A 97 LYS A 104 -1 N GLU A 100 O ARG A 252 SHEET 6 B 8 HIS A 179 ASP A 186 -1 O PHE A 181 N ILE A 101 SHEET 7 B 8 GLU A 189 VAL A 194 -1 O GLU A 189 N ASP A 186 SHEET 8 B 8 GLN A 197 SER A 203 -1 O LEU A 202 N VAL A 190 SHEET 1 C 4 ASN A 29 PHE A 30 0 SHEET 2 C 4 ARG A 85 THR A 87 -1 O THR A 87 N ASN A 29 SHEET 3 C 4 PHE A 220 VAL A 228 -1 O LEU A 224 N MET A 86 SHEET 4 C 4 GLU A 93 ILE A 94 -1 N ILE A 94 O PHE A 220 SHEET 1 D 7 ASN A 29 PHE A 30 0 SHEET 2 D 7 ARG A 85 THR A 87 -1 O THR A 87 N ASN A 29 SHEET 3 D 7 PHE A 220 VAL A 228 -1 O LEU A 224 N MET A 86 SHEET 4 D 7 ILE A 111 GLY A 119 -1 N TRP A 116 O ILE A 223 SHEET 5 D 7 GLU A 132 GLU A 137 -1 O MET A 136 N LEU A 115 SHEET 6 D 7 THR A 145 HIS A 151 -1 O THR A 149 N ASP A 134 SHEET 7 D 7 ILE A 161 HIS A 166 -1 O TYR A 165 N VAL A 146 SHEET 1 E 4 TRP B 10 GLN B 16 0 SHEET 2 E 4 GLN B 244 ASP B 256 -1 O VAL B 253 N TRP B 14 SHEET 3 E 4 CYS B 62 SER B 73 -1 N LEU B 63 O ILE B 248 SHEET 4 E 4 ALA B 56 GLU B 59 -1 N PHE B 57 O VAL B 64 SHEET 1 F 8 GLU B 49 TYR B 51 0 SHEET 2 F 8 THR B 78 SER B 83 1 O TYR B 81 N TYR B 50 SHEET 3 F 8 CYS B 62 SER B 73 -1 N VAL B 72 O TYR B 79 SHEET 4 F 8 GLN B 244 ASP B 256 -1 O ILE B 248 N LEU B 63 SHEET 5 F 8 GLY B 97 LYS B 104 -1 N LYS B 104 O TYR B 247 SHEET 6 F 8 HIS B 179 TRP B 185 -1 O PHE B 181 N ILE B 101 SHEET 7 F 8 GLU B 189 VAL B 194 -1 O TYR B 193 N SER B 182 SHEET 8 F 8 GLN B 197 SER B 203 -1 O LEU B 202 N VAL B 190 SHEET 1 G 4 ASN B 29 PHE B 30 0 SHEET 2 G 4 ARG B 85 THR B 87 -1 O THR B 87 N ASN B 29 SHEET 3 G 4 PHE B 220 VAL B 228 -1 O LEU B 224 N MET B 86 SHEET 4 G 4 GLU B 93 ILE B 94 -1 N ILE B 94 O PHE B 220 SHEET 1 H 7 ASN B 29 PHE B 30 0 SHEET 2 H 7 ARG B 85 THR B 87 -1 O THR B 87 N ASN B 29 SHEET 3 H 7 PHE B 220 VAL B 228 -1 O LEU B 224 N MET B 86 SHEET 4 H 7 ILE B 111 GLY B 119 -1 N TRP B 116 O ILE B 223 SHEET 5 H 7 GLU B 132 MET B 138 -1 O MET B 136 N LEU B 115 SHEET 6 H 7 THR B 145 HIS B 151 -1 O THR B 149 N ASP B 134 SHEET 7 H 7 ILE B 161 HIS B 166 -1 O TYR B 165 N VAL B 146 LINK O GLU A 17 CA CA A 301 1555 1555 2.35 LINK OD1 ASP A 19 CA CA A 301 1555 1555 2.59 LINK O GLY A 61 CA CA A 301 1555 1555 2.29 LINK OD1 ASP A 249 CA CA A 301 1555 1555 2.35 LINK O ASP A 249 CA CA A 301 1555 1555 2.44 LINK CA CA A 301 O HOH A 429 1555 1555 2.50 LINK CA CA A 301 O HOH A 546 1555 1555 2.41 LINK O GLU B 17 CA CA B 301 1555 1555 2.44 LINK OD1 ASP B 19 CA CA B 301 1555 1555 2.60 LINK O GLY B 61 CA CA B 301 1555 1555 2.34 LINK OD1 ASP B 249 CA CA B 301 1555 1555 2.43 LINK O ASP B 249 CA CA B 301 1555 1555 2.50 LINK CA CA B 301 O HOH B 507 1555 1555 2.22 CISPEP 1 TRP A 127 PRO A 128 0 7.05 CISPEP 2 PHE A 242 PRO A 243 0 5.52 CISPEP 3 TRP B 127 PRO B 128 0 2.70 CISPEP 4 PHE B 242 PRO B 243 0 0.51 SITE 1 AC1 6 GLU A 17 ASP A 19 GLY A 61 ASP A 249 SITE 2 AC1 6 HOH A 429 HOH A 546 SITE 1 AC2 5 GLU B 17 ASP B 19 GLY B 61 ASP B 249 SITE 2 AC2 5 HOH B 507 CRYST1 100.567 56.152 126.431 90.00 105.26 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009944 0.000000 0.002713 0.00000 SCALE2 0.000000 0.017809 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008199 0.00000