data_3B21 # _entry.id 3B21 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3B21 pdb_00003b21 10.2210/pdb3b21/pdb RCSB RCSB029979 ? ? WWPDB D_1000029979 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-02-22 2 'Structure model' 1 1 2012-03-14 3 'Structure model' 1 2 2012-04-04 4 'Structure model' 1 3 2024-10-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_entry_details 5 4 'Structure model' pdbx_modification_feature 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3B21 _pdbx_database_status.recvd_initial_deposition_date 2011-07-19 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sanada, T.' 1 'Kim, M.' 2 'Sasakawa, C.' 3 'Mizushima, T.' 4 # _citation.id primary _citation.title 'The Shigella flexneri effector OspI deamidates UBC13 to dampen the inflammatory response' _citation.journal_abbrev Nature _citation.journal_volume 483 _citation.page_first 623 _citation.page_last 626 _citation.year 2012 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22407319 _citation.pdbx_database_id_DOI 10.1038/nature10894 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sanada, T.' 1 ? primary 'Kim, M.' 2 ? primary 'Mimuro, H.' 3 ? primary 'Suzuki, M.' 4 ? primary 'Ogawa, M.' 5 ? primary 'Oyama, A.' 6 ? primary 'Ashida, H.' 7 ? primary 'Kobayashi, T.' 8 ? primary 'Koyama, T.' 9 ? primary 'Nagai, S.' 10 ? primary 'Shibata, Y.' 11 ? primary 'Gohda, J.' 12 ? primary 'Inoue, J.I.' 13 ? primary 'Mizushima, T.' 14 ? primary 'Sasakawa, C.' 15 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ORF169b 24150.873 1 ? ? ? ? 2 water nat water 18.015 127 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name OspI # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPLGSPEFMINGVSLQGTAGYEAHTEEGNVNVKKLLESLNSKSLGDMDKDSELAATLQKMINPSGGDGNCSGCALHACMA MLGYGVREAPVPNEISEYMTGFFHRHLEQIDSEGIVSHPNETYSKFRERIAENILQNTSKGSVVMISIEQATHWIAGFND GEKIMFLDVQTGKGFNLYDPVEKSPDAFVDENSSVQVIHVSDQEFDHYANSSSWKSKRLC ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLGSPEFMINGVSLQGTAGYEAHTEEGNVNVKKLLESLNSKSLGDMDKDSELAATLQKMINPSGGDGNCSGCALHACMA MLGYGVREAPVPNEISEYMTGFFHRHLEQIDSEGIVSHPNETYSKFRERIAENILQNTSKGSVVMISIEQATHWIAGFND GEKIMFLDVQTGKGFNLYDPVEKSPDAFVDENSSVQVIHVSDQEFDHYANSSSWKSKRLC ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 PRO n 1 7 GLU n 1 8 PHE n 1 9 MET n 1 10 ILE n 1 11 ASN n 1 12 GLY n 1 13 VAL n 1 14 SER n 1 15 LEU n 1 16 GLN n 1 17 GLY n 1 18 THR n 1 19 ALA n 1 20 GLY n 1 21 TYR n 1 22 GLU n 1 23 ALA n 1 24 HIS n 1 25 THR n 1 26 GLU n 1 27 GLU n 1 28 GLY n 1 29 ASN n 1 30 VAL n 1 31 ASN n 1 32 VAL n 1 33 LYS n 1 34 LYS n 1 35 LEU n 1 36 LEU n 1 37 GLU n 1 38 SER n 1 39 LEU n 1 40 ASN n 1 41 SER n 1 42 LYS n 1 43 SER n 1 44 LEU n 1 45 GLY n 1 46 ASP n 1 47 MET n 1 48 ASP n 1 49 LYS n 1 50 ASP n 1 51 SER n 1 52 GLU n 1 53 LEU n 1 54 ALA n 1 55 ALA n 1 56 THR n 1 57 LEU n 1 58 GLN n 1 59 LYS n 1 60 MET n 1 61 ILE n 1 62 ASN n 1 63 PRO n 1 64 SER n 1 65 GLY n 1 66 GLY n 1 67 ASP n 1 68 GLY n 1 69 ASN n 1 70 CYS n 1 71 SER n 1 72 GLY n 1 73 CYS n 1 74 ALA n 1 75 LEU n 1 76 HIS n 1 77 ALA n 1 78 CYS n 1 79 MET n 1 80 ALA n 1 81 MET n 1 82 LEU n 1 83 GLY n 1 84 TYR n 1 85 GLY n 1 86 VAL n 1 87 ARG n 1 88 GLU n 1 89 ALA n 1 90 PRO n 1 91 VAL n 1 92 PRO n 1 93 ASN n 1 94 GLU n 1 95 ILE n 1 96 SER n 1 97 GLU n 1 98 TYR n 1 99 MET n 1 100 THR n 1 101 GLY n 1 102 PHE n 1 103 PHE n 1 104 HIS n 1 105 ARG n 1 106 HIS n 1 107 LEU n 1 108 GLU n 1 109 GLN n 1 110 ILE n 1 111 ASP n 1 112 SER n 1 113 GLU n 1 114 GLY n 1 115 ILE n 1 116 VAL n 1 117 SER n 1 118 HIS n 1 119 PRO n 1 120 ASN n 1 121 GLU n 1 122 THR n 1 123 TYR n 1 124 SER n 1 125 LYS n 1 126 PHE n 1 127 ARG n 1 128 GLU n 1 129 ARG n 1 130 ILE n 1 131 ALA n 1 132 GLU n 1 133 ASN n 1 134 ILE n 1 135 LEU n 1 136 GLN n 1 137 ASN n 1 138 THR n 1 139 SER n 1 140 LYS n 1 141 GLY n 1 142 SER n 1 143 VAL n 1 144 VAL n 1 145 MET n 1 146 ILE n 1 147 SER n 1 148 ILE n 1 149 GLU n 1 150 GLN n 1 151 ALA n 1 152 THR n 1 153 HIS n 1 154 TRP n 1 155 ILE n 1 156 ALA n 1 157 GLY n 1 158 PHE n 1 159 ASN n 1 160 ASP n 1 161 GLY n 1 162 GLU n 1 163 LYS n 1 164 ILE n 1 165 MET n 1 166 PHE n 1 167 LEU n 1 168 ASP n 1 169 VAL n 1 170 GLN n 1 171 THR n 1 172 GLY n 1 173 LYS n 1 174 GLY n 1 175 PHE n 1 176 ASN n 1 177 LEU n 1 178 TYR n 1 179 ASP n 1 180 PRO n 1 181 VAL n 1 182 GLU n 1 183 LYS n 1 184 SER n 1 185 PRO n 1 186 ASP n 1 187 ALA n 1 188 PHE n 1 189 VAL n 1 190 ASP n 1 191 GLU n 1 192 ASN n 1 193 SER n 1 194 SER n 1 195 VAL n 1 196 GLN n 1 197 VAL n 1 198 ILE n 1 199 HIS n 1 200 VAL n 1 201 SER n 1 202 ASP n 1 203 GLN n 1 204 GLU n 1 205 PHE n 1 206 ASP n 1 207 HIS n 1 208 TYR n 1 209 ALA n 1 210 ASN n 1 211 SER n 1 212 SER n 1 213 SER n 1 214 TRP n 1 215 LYS n 1 216 SER n 1 217 LYS n 1 218 ARG n 1 219 LEU n 1 220 CYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ORF169b _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 2a _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Shigella flexneri' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 623 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX6P _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -7 ? ? ? A . n A 1 2 PRO 2 -6 ? ? ? A . n A 1 3 LEU 3 -5 ? ? ? A . n A 1 4 GLY 4 -4 ? ? ? A . n A 1 5 SER 5 -3 ? ? ? A . n A 1 6 PRO 6 -2 ? ? ? A . n A 1 7 GLU 7 -1 ? ? ? A . n A 1 8 PHE 8 0 ? ? ? A . n A 1 9 MET 9 1 ? ? ? A . n A 1 10 ILE 10 2 ? ? ? A . n A 1 11 ASN 11 3 ? ? ? A . n A 1 12 GLY 12 4 ? ? ? A . n A 1 13 VAL 13 5 ? ? ? A . n A 1 14 SER 14 6 ? ? ? A . n A 1 15 LEU 15 7 ? ? ? A . n A 1 16 GLN 16 8 ? ? ? A . n A 1 17 GLY 17 9 ? ? ? A . n A 1 18 THR 18 10 ? ? ? A . n A 1 19 ALA 19 11 ? ? ? A . n A 1 20 GLY 20 12 ? ? ? A . n A 1 21 TYR 21 13 ? ? ? A . n A 1 22 GLU 22 14 ? ? ? A . n A 1 23 ALA 23 15 ? ? ? A . n A 1 24 HIS 24 16 ? ? ? A . n A 1 25 THR 25 17 ? ? ? A . n A 1 26 GLU 26 18 ? ? ? A . n A 1 27 GLU 27 19 ? ? ? A . n A 1 28 GLY 28 20 ? ? ? A . n A 1 29 ASN 29 21 21 ASN ASN A . n A 1 30 VAL 30 22 22 VAL VAL A . n A 1 31 ASN 31 23 23 ASN ASN A . n A 1 32 VAL 32 24 24 VAL VAL A . n A 1 33 LYS 33 25 25 LYS LYS A . n A 1 34 LYS 34 26 26 LYS LYS A . n A 1 35 LEU 35 27 27 LEU LEU A . n A 1 36 LEU 36 28 28 LEU LEU A . n A 1 37 GLU 37 29 29 GLU GLU A . n A 1 38 SER 38 30 30 SER SER A . n A 1 39 LEU 39 31 31 LEU LEU A . n A 1 40 ASN 40 32 32 ASN ASN A . n A 1 41 SER 41 33 33 SER SER A . n A 1 42 LYS 42 34 34 LYS LYS A . n A 1 43 SER 43 35 35 SER SER A . n A 1 44 LEU 44 36 36 LEU LEU A . n A 1 45 GLY 45 37 37 GLY GLY A . n A 1 46 ASP 46 38 38 ASP ASP A . n A 1 47 MET 47 39 39 MET MET A . n A 1 48 ASP 48 40 40 ASP ASP A . n A 1 49 LYS 49 41 41 LYS LYS A . n A 1 50 ASP 50 42 42 ASP ASP A . n A 1 51 SER 51 43 43 SER SER A . n A 1 52 GLU 52 44 44 GLU GLU A . n A 1 53 LEU 53 45 45 LEU LEU A . n A 1 54 ALA 54 46 46 ALA ALA A . n A 1 55 ALA 55 47 47 ALA ALA A . n A 1 56 THR 56 48 48 THR THR A . n A 1 57 LEU 57 49 49 LEU LEU A . n A 1 58 GLN 58 50 50 GLN GLN A . n A 1 59 LYS 59 51 51 LYS LYS A . n A 1 60 MET 60 52 52 MET MET A . n A 1 61 ILE 61 53 53 ILE ILE A . n A 1 62 ASN 62 54 54 ASN ASN A . n A 1 63 PRO 63 55 55 PRO PRO A . n A 1 64 SER 64 56 56 SER SER A . n A 1 65 GLY 65 57 57 GLY GLY A . n A 1 66 GLY 66 58 58 GLY GLY A . n A 1 67 ASP 67 59 59 ASP ASP A . n A 1 68 GLY 68 60 60 GLY GLY A . n A 1 69 ASN 69 61 61 ASN ASN A . n A 1 70 CYS 70 62 62 CYS CYS A . n A 1 71 SER 71 63 63 SER SER A . n A 1 72 GLY 72 64 64 GLY GLY A . n A 1 73 CYS 73 65 65 CYS CYS A . n A 1 74 ALA 74 66 66 ALA ALA A . n A 1 75 LEU 75 67 67 LEU LEU A . n A 1 76 HIS 76 68 68 HIS HIS A . n A 1 77 ALA 77 69 69 ALA ALA A . n A 1 78 CYS 78 70 70 CYS CYS A . n A 1 79 MET 79 71 71 MET MET A . n A 1 80 ALA 80 72 72 ALA ALA A . n A 1 81 MET 81 73 73 MET MET A . n A 1 82 LEU 82 74 74 LEU LEU A . n A 1 83 GLY 83 75 75 GLY GLY A . n A 1 84 TYR 84 76 76 TYR TYR A . n A 1 85 GLY 85 77 77 GLY GLY A . n A 1 86 VAL 86 78 78 VAL VAL A . n A 1 87 ARG 87 79 79 ARG ARG A . n A 1 88 GLU 88 80 80 GLU GLU A . n A 1 89 ALA 89 81 81 ALA ALA A . n A 1 90 PRO 90 82 82 PRO PRO A . n A 1 91 VAL 91 83 83 VAL VAL A . n A 1 92 PRO 92 84 84 PRO PRO A . n A 1 93 ASN 93 85 85 ASN ASN A . n A 1 94 GLU 94 86 86 GLU GLU A . n A 1 95 ILE 95 87 87 ILE ILE A . n A 1 96 SER 96 88 88 SER SER A . n A 1 97 GLU 97 89 89 GLU GLU A . n A 1 98 TYR 98 90 90 TYR TYR A . n A 1 99 MET 99 91 91 MET MET A . n A 1 100 THR 100 92 92 THR THR A . n A 1 101 GLY 101 93 93 GLY GLY A . n A 1 102 PHE 102 94 94 PHE PHE A . n A 1 103 PHE 103 95 95 PHE PHE A . n A 1 104 HIS 104 96 96 HIS HIS A . n A 1 105 ARG 105 97 97 ARG ARG A . n A 1 106 HIS 106 98 98 HIS HIS A . n A 1 107 LEU 107 99 99 LEU LEU A . n A 1 108 GLU 108 100 100 GLU GLU A . n A 1 109 GLN 109 101 101 GLN GLN A . n A 1 110 ILE 110 102 102 ILE ILE A . n A 1 111 ASP 111 103 103 ASP ASP A . n A 1 112 SER 112 104 104 SER SER A . n A 1 113 GLU 113 105 105 GLU GLU A . n A 1 114 GLY 114 106 106 GLY GLY A . n A 1 115 ILE 115 107 107 ILE ILE A . n A 1 116 VAL 116 108 108 VAL VAL A . n A 1 117 SER 117 109 109 SER SER A . n A 1 118 HIS 118 110 110 HIS HIS A . n A 1 119 PRO 119 111 111 PRO PRO A . n A 1 120 ASN 120 112 112 ASN ASN A . n A 1 121 GLU 121 113 113 GLU GLU A . n A 1 122 THR 122 114 114 THR THR A . n A 1 123 TYR 123 115 115 TYR TYR A . n A 1 124 SER 124 116 116 SER SER A . n A 1 125 LYS 125 117 117 LYS LYS A . n A 1 126 PHE 126 118 118 PHE PHE A . n A 1 127 ARG 127 119 119 ARG ARG A . n A 1 128 GLU 128 120 120 GLU GLU A . n A 1 129 ARG 129 121 121 ARG ARG A . n A 1 130 ILE 130 122 122 ILE ILE A . n A 1 131 ALA 131 123 123 ALA ALA A . n A 1 132 GLU 132 124 124 GLU GLU A . n A 1 133 ASN 133 125 125 ASN ASN A . n A 1 134 ILE 134 126 126 ILE ILE A . n A 1 135 LEU 135 127 127 LEU LEU A . n A 1 136 GLN 136 128 128 GLN GLN A . n A 1 137 ASN 137 129 129 ASN ASN A . n A 1 138 THR 138 130 130 THR THR A . n A 1 139 SER 139 131 131 SER SER A . n A 1 140 LYS 140 132 132 LYS LYS A . n A 1 141 GLY 141 133 133 GLY GLY A . n A 1 142 SER 142 134 134 SER SER A . n A 1 143 VAL 143 135 135 VAL VAL A . n A 1 144 VAL 144 136 136 VAL VAL A . n A 1 145 MET 145 137 137 MET MET A . n A 1 146 ILE 146 138 138 ILE ILE A . n A 1 147 SER 147 139 139 SER SER A . n A 1 148 ILE 148 140 140 ILE ILE A . n A 1 149 GLU 149 141 141 GLU GLU A . n A 1 150 GLN 150 142 142 GLN GLN A . n A 1 151 ALA 151 143 143 ALA ALA A . n A 1 152 THR 152 144 144 THR THR A . n A 1 153 HIS 153 145 145 HIS HIS A . n A 1 154 TRP 154 146 146 TRP TRP A . n A 1 155 ILE 155 147 147 ILE ILE A . n A 1 156 ALA 156 148 148 ALA ALA A . n A 1 157 GLY 157 149 149 GLY GLY A . n A 1 158 PHE 158 150 150 PHE PHE A . n A 1 159 ASN 159 151 151 ASN ASN A . n A 1 160 ASP 160 152 152 ASP ASP A . n A 1 161 GLY 161 153 153 GLY GLY A . n A 1 162 GLU 162 154 154 GLU GLU A . n A 1 163 LYS 163 155 155 LYS LYS A . n A 1 164 ILE 164 156 156 ILE ILE A . n A 1 165 MET 165 157 157 MET MET A . n A 1 166 PHE 166 158 158 PHE PHE A . n A 1 167 LEU 167 159 159 LEU LEU A . n A 1 168 ASP 168 160 160 ASP ASP A . n A 1 169 VAL 169 161 161 VAL VAL A . n A 1 170 GLN 170 162 162 GLN GLN A . n A 1 171 THR 171 163 163 THR THR A . n A 1 172 GLY 172 164 164 GLY GLY A . n A 1 173 LYS 173 165 165 LYS LYS A . n A 1 174 GLY 174 166 166 GLY GLY A . n A 1 175 PHE 175 167 167 PHE PHE A . n A 1 176 ASN 176 168 168 ASN ASN A . n A 1 177 LEU 177 169 169 LEU LEU A . n A 1 178 TYR 178 170 170 TYR TYR A . n A 1 179 ASP 179 171 171 ASP ASP A . n A 1 180 PRO 180 172 172 PRO PRO A . n A 1 181 VAL 181 173 173 VAL VAL A . n A 1 182 GLU 182 174 174 GLU GLU A . n A 1 183 LYS 183 175 175 LYS LYS A . n A 1 184 SER 184 176 176 SER SER A . n A 1 185 PRO 185 177 177 PRO PRO A . n A 1 186 ASP 186 178 178 ASP ASP A . n A 1 187 ALA 187 179 179 ALA ALA A . n A 1 188 PHE 188 180 180 PHE PHE A . n A 1 189 VAL 189 181 181 VAL VAL A . n A 1 190 ASP 190 182 182 ASP ASP A . n A 1 191 GLU 191 183 183 GLU GLU A . n A 1 192 ASN 192 184 184 ASN ASN A . n A 1 193 SER 193 185 185 SER SER A . n A 1 194 SER 194 186 186 SER SER A . n A 1 195 VAL 195 187 187 VAL VAL A . n A 1 196 GLN 196 188 188 GLN GLN A . n A 1 197 VAL 197 189 189 VAL VAL A . n A 1 198 ILE 198 190 190 ILE ILE A . n A 1 199 HIS 199 191 191 HIS HIS A . n A 1 200 VAL 200 192 192 VAL VAL A . n A 1 201 SER 201 193 193 SER SER A . n A 1 202 ASP 202 194 194 ASP ASP A . n A 1 203 GLN 203 195 195 GLN GLN A . n A 1 204 GLU 204 196 196 GLU GLU A . n A 1 205 PHE 205 197 197 PHE PHE A . n A 1 206 ASP 206 198 198 ASP ASP A . n A 1 207 HIS 207 199 199 HIS HIS A . n A 1 208 TYR 208 200 200 TYR TYR A . n A 1 209 ALA 209 201 201 ALA ALA A . n A 1 210 ASN 210 202 202 ASN ASN A . n A 1 211 SER 211 203 203 SER SER A . n A 1 212 SER 212 204 204 SER SER A . n A 1 213 SER 213 205 205 SER SER A . n A 1 214 TRP 214 206 206 TRP TRP A . n A 1 215 LYS 215 207 207 LYS LYS A . n A 1 216 SER 216 208 208 SER SER A . n A 1 217 LYS 217 209 209 LYS LYS A . n A 1 218 ARG 218 210 210 ARG ARG A . n A 1 219 LEU 219 211 211 LEU LEU A . n A 1 220 CYS 220 212 212 CYS CYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 213 1 HOH HOH A . B 2 HOH 2 214 2 HOH HOH A . B 2 HOH 3 215 3 HOH HOH A . B 2 HOH 4 216 4 HOH HOH A . B 2 HOH 5 217 5 HOH HOH A . B 2 HOH 6 218 6 HOH HOH A . B 2 HOH 7 219 7 HOH HOH A . B 2 HOH 8 220 8 HOH HOH A . B 2 HOH 9 221 9 HOH HOH A . B 2 HOH 10 222 10 HOH HOH A . B 2 HOH 11 223 11 HOH HOH A . B 2 HOH 12 224 12 HOH HOH A . B 2 HOH 13 225 13 HOH HOH A . B 2 HOH 14 226 14 HOH HOH A . B 2 HOH 15 227 15 HOH HOH A . B 2 HOH 16 228 16 HOH HOH A . B 2 HOH 17 229 17 HOH HOH A . B 2 HOH 18 230 18 HOH HOH A . B 2 HOH 19 231 19 HOH HOH A . B 2 HOH 20 232 20 HOH HOH A . B 2 HOH 21 233 21 HOH HOH A . B 2 HOH 22 234 22 HOH HOH A . B 2 HOH 23 235 23 HOH HOH A . B 2 HOH 24 236 24 HOH HOH A . B 2 HOH 25 237 25 HOH HOH A . B 2 HOH 26 238 26 HOH HOH A . B 2 HOH 27 239 27 HOH HOH A . B 2 HOH 28 240 28 HOH HOH A . B 2 HOH 29 241 29 HOH HOH A . B 2 HOH 30 242 30 HOH HOH A . B 2 HOH 31 243 31 HOH HOH A . B 2 HOH 32 244 32 HOH HOH A . B 2 HOH 33 245 33 HOH HOH A . B 2 HOH 34 246 34 HOH HOH A . B 2 HOH 35 247 35 HOH HOH A . B 2 HOH 36 248 36 HOH HOH A . B 2 HOH 37 249 37 HOH HOH A . B 2 HOH 38 250 38 HOH HOH A . B 2 HOH 39 251 39 HOH HOH A . B 2 HOH 40 252 40 HOH HOH A . B 2 HOH 41 253 41 HOH HOH A . B 2 HOH 42 254 42 HOH HOH A . B 2 HOH 43 255 43 HOH HOH A . B 2 HOH 44 256 44 HOH HOH A . B 2 HOH 45 257 45 HOH HOH A . B 2 HOH 46 258 46 HOH HOH A . B 2 HOH 47 259 47 HOH HOH A . B 2 HOH 48 260 48 HOH HOH A . B 2 HOH 49 261 49 HOH HOH A . B 2 HOH 50 262 50 HOH HOH A . B 2 HOH 51 263 51 HOH HOH A . B 2 HOH 52 264 52 HOH HOH A . B 2 HOH 53 265 53 HOH HOH A . B 2 HOH 54 266 54 HOH HOH A . B 2 HOH 55 267 55 HOH HOH A . B 2 HOH 56 268 56 HOH HOH A . B 2 HOH 57 269 57 HOH HOH A . B 2 HOH 58 270 59 HOH HOH A . B 2 HOH 59 271 60 HOH HOH A . B 2 HOH 60 272 61 HOH HOH A . B 2 HOH 61 273 62 HOH HOH A . B 2 HOH 62 274 63 HOH HOH A . B 2 HOH 63 275 64 HOH HOH A . B 2 HOH 64 276 65 HOH HOH A . B 2 HOH 65 277 66 HOH HOH A . B 2 HOH 66 278 67 HOH HOH A . B 2 HOH 67 279 68 HOH HOH A . B 2 HOH 68 280 69 HOH HOH A . B 2 HOH 69 281 70 HOH HOH A . B 2 HOH 70 282 71 HOH HOH A . B 2 HOH 71 283 72 HOH HOH A . B 2 HOH 72 284 73 HOH HOH A . B 2 HOH 73 285 74 HOH HOH A . B 2 HOH 74 286 75 HOH HOH A . B 2 HOH 75 287 76 HOH HOH A . B 2 HOH 76 288 77 HOH HOH A . B 2 HOH 77 289 78 HOH HOH A . B 2 HOH 78 290 79 HOH HOH A . B 2 HOH 79 291 80 HOH HOH A . B 2 HOH 80 292 81 HOH HOH A . B 2 HOH 81 293 82 HOH HOH A . B 2 HOH 82 294 83 HOH HOH A . B 2 HOH 83 295 84 HOH HOH A . B 2 HOH 84 296 85 HOH HOH A . B 2 HOH 85 297 86 HOH HOH A . B 2 HOH 86 298 87 HOH HOH A . B 2 HOH 87 299 88 HOH HOH A . B 2 HOH 88 300 89 HOH HOH A . B 2 HOH 89 301 90 HOH HOH A . B 2 HOH 90 302 91 HOH HOH A . B 2 HOH 91 303 92 HOH HOH A . B 2 HOH 92 304 93 HOH HOH A . B 2 HOH 93 305 94 HOH HOH A . B 2 HOH 94 306 95 HOH HOH A . B 2 HOH 95 307 96 HOH HOH A . B 2 HOH 96 308 97 HOH HOH A . B 2 HOH 97 309 98 HOH HOH A . B 2 HOH 98 310 99 HOH HOH A . B 2 HOH 99 311 100 HOH HOH A . B 2 HOH 100 312 101 HOH HOH A . B 2 HOH 101 313 102 HOH HOH A . B 2 HOH 102 314 103 HOH HOH A . B 2 HOH 103 315 104 HOH HOH A . B 2 HOH 104 316 105 HOH HOH A . B 2 HOH 105 317 106 HOH HOH A . B 2 HOH 106 318 107 HOH HOH A . B 2 HOH 107 319 108 HOH HOH A . B 2 HOH 108 320 109 HOH HOH A . B 2 HOH 109 321 111 HOH HOH A . B 2 HOH 110 322 112 HOH HOH A . B 2 HOH 111 323 113 HOH HOH A . B 2 HOH 112 324 114 HOH HOH A . B 2 HOH 113 325 115 HOH HOH A . B 2 HOH 114 326 116 HOH HOH A . B 2 HOH 115 327 117 HOH HOH A . B 2 HOH 116 328 118 HOH HOH A . B 2 HOH 117 329 119 HOH HOH A . B 2 HOH 118 330 120 HOH HOH A . B 2 HOH 119 331 121 HOH HOH A . B 2 HOH 120 332 122 HOH HOH A . B 2 HOH 121 333 123 HOH HOH A . B 2 HOH 122 334 124 HOH HOH A . B 2 HOH 123 335 125 HOH HOH A . B 2 HOH 124 336 126 HOH HOH A . B 2 HOH 125 337 127 HOH HOH A . B 2 HOH 126 338 128 HOH HOH A . B 2 HOH 127 339 129 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MLPHARE phasing . ? 1 REFMAC refinement 5.5.0109 ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # _cell.entry_id 3B21 _cell.length_a 67.699 _cell.length_b 91.237 _cell.length_c 67.862 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3B21 _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3B21 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.20 _exptl_crystal.density_percent_sol 44.18 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 288 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '0.1M MES, 0.1M NaAcetate, 1.0M NaCl, 24%(w/v) PEG 8000, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 288K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'Bruker DIP-6040' _diffrn_detector.pdbx_collection_date 2007-12-13 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.90 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL44XU' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL44XU _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.90 # _reflns.entry_id 3B21 _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.0 _reflns.number_obs 14220 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.098 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.1 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.0 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.35 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 6.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3B21 _refine.ls_number_reflns_obs 13480 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 45.62 _refine.ls_d_res_high 2.01 _refine.ls_percent_reflns_obs 98.67 _refine.ls_R_factor_obs 0.18359 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18138 _refine.ls_R_factor_R_free 0.22562 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 715 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.942 _refine.correlation_coeff_Fo_to_Fc_free 0.912 _refine.B_iso_mean 16.513 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] -0.01 _refine.aniso_B[3][3] 0.01 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.179 _refine.pdbx_overall_ESU_R_Free 0.161 _refine.overall_SU_ML 0.102 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 3.545 _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1491 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 127 _refine_hist.number_atoms_total 1618 _refine_hist.d_res_high 2.01 _refine_hist.d_res_low 45.62 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.007 0.021 ? 1529 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 0.966 1.941 ? 2066 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.728 5.000 ? 195 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.508 25.676 ? 74 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.569 15.000 ? 269 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14.153 15.000 ? 5 'X-RAY DIFFRACTION' ? r_chiral_restr 0.071 0.200 ? 223 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.021 ? 1167 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.711 1.500 ? 957 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.871 2.000 ? 1540 'X-RAY DIFFRACTION' ? r_scbond_it 4.554 3.000 ? 572 'X-RAY DIFFRACTION' ? r_scangle_it 7.257 4.500 ? 524 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.008 _refine_ls_shell.d_res_low 2.060 _refine_ls_shell.number_reflns_R_work 840 _refine_ls_shell.R_factor_R_work 0.179 _refine_ls_shell.percent_reflns_obs 84.81 _refine_ls_shell.R_factor_R_free 0.219 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 48 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _database_PDB_matrix.entry_id 3B21 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3B21 _struct.title 'Crystal structure of OspI from Shigella flexineri' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3B21 _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.text 'Shigella, Bacterial protein, effector, type 3 secretion system, UNKNOWN FUNCTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8VSD5_SHIFL _struct_ref.pdbx_db_accession Q8VSD5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MINGVSLQGTAGYEAHTEEGNVNVKKLLESLNSKSLGDMDKDSELAATLQKMINPSGGDGNCSGCALHACMAMLGYGVRE APVPNEISEYMTGFFHRHLEQIDSEGIVSHPNETYSKFRERIAENILQNTSKGSVVMISIEQATHWIAGFNDGEKIMFLD VQTGKGFNLYDPVEKSPDAFVDENSSVQVIHVSDQEFDHYANSSSWKSKRLC ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3B21 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 9 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 220 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8VSD5 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 212 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 212 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3B21 GLY A 1 ? UNP Q8VSD5 ? ? 'expression tag' -7 1 1 3B21 PRO A 2 ? UNP Q8VSD5 ? ? 'expression tag' -6 2 1 3B21 LEU A 3 ? UNP Q8VSD5 ? ? 'expression tag' -5 3 1 3B21 GLY A 4 ? UNP Q8VSD5 ? ? 'expression tag' -4 4 1 3B21 SER A 5 ? UNP Q8VSD5 ? ? 'expression tag' -3 5 1 3B21 PRO A 6 ? UNP Q8VSD5 ? ? 'expression tag' -2 6 1 3B21 GLU A 7 ? UNP Q8VSD5 ? ? 'expression tag' -1 7 1 3B21 PHE A 8 ? UNP Q8VSD5 ? ? 'expression tag' 0 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 31 ? SER A 41 ? ASN A 23 SER A 33 1 ? 11 HELX_P HELX_P2 2 GLY A 45 ? ASN A 62 ? GLY A 37 ASN A 54 1 ? 18 HELX_P HELX_P3 3 CYS A 70 ? LEU A 82 ? CYS A 62 LEU A 74 1 ? 13 HELX_P HELX_P4 4 VAL A 91 ? PHE A 102 ? VAL A 83 PHE A 94 5 ? 12 HELX_P HELX_P5 5 HIS A 106 ? ASP A 111 ? HIS A 98 ASP A 103 1 ? 6 HELX_P HELX_P6 6 THR A 122 ? THR A 138 ? THR A 114 THR A 130 1 ? 17 HELX_P HELX_P7 7 SER A 201 ? ASN A 210 ? SER A 193 ASN A 202 1 ? 10 HELX_P HELX_P8 8 SER A 211 ? LYS A 217 ? SER A 203 LYS A 209 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 70 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id A _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 73 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 62 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 65 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.055 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id CYS _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 70 _pdbx_modification_feature.label_alt_id A _pdbx_modification_feature.modified_residue_label_comp_id CYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 73 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id CYS _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 62 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id CYS _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 65 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom SG _pdbx_modification_feature.modified_residue_id_linking_atom SG _pdbx_modification_feature.modified_residue_id . _pdbx_modification_feature.ref_pcm_id . _pdbx_modification_feature.ref_comp_id . _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Disulfide bridge' # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 115 ? VAL A 116 ? ILE A 107 VAL A 108 A 2 SER A 194 ? ILE A 198 ? SER A 186 ILE A 190 A 3 VAL A 143 ? ILE A 148 ? VAL A 135 ILE A 140 A 4 HIS A 153 ? ASN A 159 ? HIS A 145 ASN A 151 A 5 ILE A 164 ? LEU A 167 ? ILE A 156 LEU A 159 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 115 ? N ILE A 107 O VAL A 195 ? O VAL A 187 A 2 3 O ILE A 198 ? O ILE A 190 N MET A 145 ? N MET A 137 A 3 4 N ILE A 146 ? N ILE A 138 O ILE A 155 ? O ILE A 147 A 4 5 N ALA A 156 ? N ALA A 148 O LEU A 167 ? O LEU A 159 # _pdbx_entry_details.entry_id 3B21 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OD1 A ASN 85 ? ? O A HOH 339 ? ? 2.14 2 1 OG A SER 131 ? ? O A HOH 274 ? ? 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 61 ? ? -101.93 71.23 2 1 TYR A 90 ? ? -161.27 -57.47 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -7 ? A GLY 1 2 1 Y 1 A PRO -6 ? A PRO 2 3 1 Y 1 A LEU -5 ? A LEU 3 4 1 Y 1 A GLY -4 ? A GLY 4 5 1 Y 1 A SER -3 ? A SER 5 6 1 Y 1 A PRO -2 ? A PRO 6 7 1 Y 1 A GLU -1 ? A GLU 7 8 1 Y 1 A PHE 0 ? A PHE 8 9 1 Y 1 A MET 1 ? A MET 9 10 1 Y 1 A ILE 2 ? A ILE 10 11 1 Y 1 A ASN 3 ? A ASN 11 12 1 Y 1 A GLY 4 ? A GLY 12 13 1 Y 1 A VAL 5 ? A VAL 13 14 1 Y 1 A SER 6 ? A SER 14 15 1 Y 1 A LEU 7 ? A LEU 15 16 1 Y 1 A GLN 8 ? A GLN 16 17 1 Y 1 A GLY 9 ? A GLY 17 18 1 Y 1 A THR 10 ? A THR 18 19 1 Y 1 A ALA 11 ? A ALA 19 20 1 Y 1 A GLY 12 ? A GLY 20 21 1 Y 1 A TYR 13 ? A TYR 21 22 1 Y 1 A GLU 14 ? A GLU 22 23 1 Y 1 A ALA 15 ? A ALA 23 24 1 Y 1 A HIS 16 ? A HIS 24 25 1 Y 1 A THR 17 ? A THR 25 26 1 Y 1 A GLU 18 ? A GLU 26 27 1 Y 1 A GLU 19 ? A GLU 27 28 1 Y 1 A GLY 20 ? A GLY 28 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _atom_sites.entry_id 3B21 _atom_sites.fract_transf_matrix[1][1] 0.014771 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010960 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014736 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_