HEADER TRANSFERASE 22-OCT-07 3B3J TITLE THE 2.55 A CRYSTAL STRUCTURE OF THE APO CATALYTIC DOMAIN OF TITLE 2 COACTIVATOR-ASSOCIATED ARGININE METHYL TRANSFERASE I(CARM1:28-507, TITLE 3 RESIDUES 28-146 AND 479-507 NOT ORDERED) COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE-ARGININE METHYLTRANSFERASE CARM1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTEIN ARGININE N-METHYLTRANSFERASE 4, COACTIVATOR- COMPND 5 ASSOCIATED ARGININE METHYLTRANSFERASE 1; COMPND 6 EC: 2.1.1.125, 2.1.1.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: CARM1, PRMT4; SOURCE 6 EXPRESSION_SYSTEM: UNIDENTIFIED BACULOVIRUS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10469; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: SF9 KEYWDS PROTEIN ARGININE METHYLTRANSFERASE 4, APO CATALYTIC DOMAIN, CHROMATIN KEYWDS 2 REGULATOR, MRNA PROCESSING, MRNA SPLICING, NUCLEUS, S-ADENOSYL-L- KEYWDS 3 METHIONINE, TRANSCRIPTION, TRANSCRIPTION REGULATION, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR N.TROFFER-CHARLIER,V.CURA,P.HASSENBOEHLER,D.MORAS,J.CAVARELLI REVDAT 4 21-FEB-24 3B3J 1 REMARK REVDAT 3 13-JUL-11 3B3J 1 VERSN REVDAT 2 24-FEB-09 3B3J 1 VERSN REVDAT 1 06-NOV-07 3B3J 0 JRNL AUTH N.TROFFER-CHARLIER,V.CURA,P.HASSENBOEHLER,D.MORAS, JRNL AUTH 2 J.CAVARELLI JRNL TITL FUNCTIONAL INSIGHTS FROM STRUCTURES OF JRNL TITL 2 COACTIVATOR-ASSOCIATED ARGININE METHYLTRANSFERASE 1 DOMAINS. JRNL REF EMBO J. V. 26 4391 2007 JRNL REFN ISSN 0261-4189 JRNL PMID 17882262 JRNL DOI 10.1038/SJ.EMBOJ.7601855 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH N.TROFFER-CHARLIER,V.CURA,P.HASSENBOEHLER,D.MORAS, REMARK 1 AUTH 2 J.CAVARELLI REMARK 1 TITL EXPRESSION, PURIFICATION, CRYSTALLIZATION AND PRELIMINARY REMARK 1 TITL 2 CRYSTALLOGRAPHIC STUDY OF ISOLATED MODULES OF THE MOUSE REMARK 1 TITL 3 COACTIVATOR-ASSOCIATED ARGININE METHYLTRANSFERASE 1. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. 63 330 2007 REMARK 1 REFN ESSN 1744-3091 REMARK 1 PMID 17401209 REMARK 1 DOI 10.1107/S1744309107011785 REMARK 2 REMARK 2 RESOLUTION. 2.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 117.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 21499 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.237 REMARK 3 R VALUE (WORKING SET) : 0.235 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1165 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.62 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1578 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.34 REMARK 3 BIN R VALUE (WORKING SET) : 0.2810 REMARK 3 BIN FREE R VALUE SET COUNT : 83 REMARK 3 BIN FREE R VALUE : 0.3560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2664 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 54 REMARK 3 SOLVENT ATOMS : 35 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 67.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.30000 REMARK 3 B22 (A**2) : 0.30000 REMARK 3 B33 (A**2) : -0.45000 REMARK 3 B12 (A**2) : 0.15000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.313 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.250 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.175 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.135 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.919 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.901 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2787 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3771 ; 1.532 ; 1.961 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 331 ; 7.009 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 129 ;35.622 ;24.031 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 457 ;19.569 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;17.023 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 406 ; 0.118 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2147 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1026 ; 0.226 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1877 ; 0.319 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 105 ; 0.153 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 42 ; 0.139 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 3 ; 0.231 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1710 ; 0.892 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2684 ; 1.596 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1223 ; 2.176 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1087 ; 3.520 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 147 A 478 REMARK 3 ORIGIN FOR THE GROUP (A): 50.5300 16.7160 57.1940 REMARK 3 T TENSOR REMARK 3 T11: 0.0196 T22: -0.1190 REMARK 3 T33: -0.0309 T12: 0.0727 REMARK 3 T13: 0.0418 T23: -0.0503 REMARK 3 L TENSOR REMARK 3 L11: 0.7771 L22: 1.0917 REMARK 3 L33: 2.5901 L12: -0.0022 REMARK 3 L13: -0.1703 L23: 0.4591 REMARK 3 S TENSOR REMARK 3 S11: 0.0722 S12: 0.0747 S13: 0.1349 REMARK 3 S21: -0.1637 S22: -0.0959 S23: 0.2001 REMARK 3 S31: -0.0254 S32: -0.0317 S33: 0.0237 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3B3J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-OCT-07. REMARK 100 THE DEPOSITION ID IS D_1000045033. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAY-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21499 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.550 REMARK 200 RESOLUTION RANGE LOW (A) : 117.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 11.60 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : 0.06400 REMARK 200 FOR THE DATA SET : 25.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 11.50 REMARK 200 R MERGE FOR SHELL (I) : 0.28200 REMARK 200 R SYM FOR SHELL (I) : 0.28200 REMARK 200 FOR SHELL : 6.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5% MPD, 100MM SODIUM CITRATE, 100 MM REMARK 280 NACL, 100 MM BENZAMIDINE CHLORIDE, PH 5.6, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.53600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 41.76800 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 83.53600 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 41.76800 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 83.53600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 41.76800 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 83.53600 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 41.76800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 28 REMARK 465 THR A 29 REMARK 465 VAL A 30 REMARK 465 SER A 31 REMARK 465 VAL A 32 REMARK 465 PHE A 33 REMARK 465 PRO A 34 REMARK 465 GLY A 35 REMARK 465 ALA A 36 REMARK 465 ARG A 37 REMARK 465 LEU A 38 REMARK 465 LEU A 39 REMARK 465 THR A 40 REMARK 465 ILE A 41 REMARK 465 GLY A 42 REMARK 465 ASP A 43 REMARK 465 ALA A 44 REMARK 465 ASN A 45 REMARK 465 GLY A 46 REMARK 465 GLU A 47 REMARK 465 ILE A 48 REMARK 465 GLN A 49 REMARK 465 ARG A 50 REMARK 465 HIS A 51 REMARK 465 ALA A 52 REMARK 465 GLU A 53 REMARK 465 GLN A 54 REMARK 465 GLN A 55 REMARK 465 ALA A 56 REMARK 465 LEU A 57 REMARK 465 ARG A 58 REMARK 465 LEU A 59 REMARK 465 GLU A 60 REMARK 465 VAL A 61 REMARK 465 ARG A 62 REMARK 465 ALA A 63 REMARK 465 GLY A 64 REMARK 465 PRO A 65 REMARK 465 ASP A 66 REMARK 465 ALA A 67 REMARK 465 ALA A 68 REMARK 465 GLY A 69 REMARK 465 ILE A 70 REMARK 465 ALA A 71 REMARK 465 LEU A 72 REMARK 465 TYR A 73 REMARK 465 SER A 74 REMARK 465 HIS A 75 REMARK 465 GLU A 76 REMARK 465 ASP A 77 REMARK 465 VAL A 78 REMARK 465 CYS A 79 REMARK 465 VAL A 80 REMARK 465 PHE A 81 REMARK 465 LYS A 82 REMARK 465 CYS A 83 REMARK 465 SER A 84 REMARK 465 VAL A 85 REMARK 465 SER A 86 REMARK 465 ARG A 87 REMARK 465 GLU A 88 REMARK 465 THR A 89 REMARK 465 GLU A 90 REMARK 465 CYS A 91 REMARK 465 SER A 92 REMARK 465 ARG A 93 REMARK 465 VAL A 94 REMARK 465 GLY A 95 REMARK 465 ARG A 96 REMARK 465 GLN A 97 REMARK 465 SER A 98 REMARK 465 PHE A 99 REMARK 465 ILE A 100 REMARK 465 ILE A 101 REMARK 465 THR A 102 REMARK 465 LEU A 103 REMARK 465 GLY A 104 REMARK 465 CYS A 105 REMARK 465 ASN A 106 REMARK 465 SER A 107 REMARK 465 VAL A 108 REMARK 465 LEU A 109 REMARK 465 ILE A 110 REMARK 465 GLN A 111 REMARK 465 PHE A 112 REMARK 465 ALA A 113 REMARK 465 THR A 114 REMARK 465 PRO A 115 REMARK 465 HIS A 116 REMARK 465 ASP A 117 REMARK 465 PHE A 118 REMARK 465 CYS A 119 REMARK 465 SER A 120 REMARK 465 PHE A 121 REMARK 465 TYR A 122 REMARK 465 ASN A 123 REMARK 465 ILE A 124 REMARK 465 LEU A 125 REMARK 465 LYS A 126 REMARK 465 THR A 127 REMARK 465 CYS A 128 REMARK 465 ARG A 129 REMARK 465 GLY A 130 REMARK 465 HIS A 131 REMARK 465 THR A 132 REMARK 465 LEU A 133 REMARK 465 GLU A 134 REMARK 465 ARG A 135 REMARK 465 SER A 136 REMARK 465 VAL A 137 REMARK 465 PHE A 138 REMARK 465 SER A 139 REMARK 465 GLU A 140 REMARK 465 ARG A 141 REMARK 465 THR A 142 REMARK 465 GLU A 143 REMARK 465 GLU A 144 REMARK 465 SER A 145 REMARK 465 SER A 146 REMARK 465 GLY A 479 REMARK 465 THR A 480 REMARK 465 THR A 481 REMARK 465 PRO A 482 REMARK 465 SER A 483 REMARK 465 PRO A 484 REMARK 465 PRO A 485 REMARK 465 PRO A 486 REMARK 465 GLY A 487 REMARK 465 SER A 488 REMARK 465 HIS A 489 REMARK 465 TYR A 490 REMARK 465 THR A 491 REMARK 465 SER A 492 REMARK 465 PRO A 493 REMARK 465 SER A 494 REMARK 465 GLU A 495 REMARK 465 ASN A 496 REMARK 465 MET A 497 REMARK 465 TRP A 498 REMARK 465 ASN A 499 REMARK 465 THR A 500 REMARK 465 GLY A 501 REMARK 465 SER A 502 REMARK 465 THR A 503 REMARK 465 TYR A 504 REMARK 465 ASN A 505 REMARK 465 LEU A 506 REMARK 465 SER A 507 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP A 345 N ARG A 347 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 295 CA - CB - CG ANGL. DEV. = 14.4 DEGREES REMARK 500 ASP A 300 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG A 420 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 148 123.10 80.37 REMARK 500 CYS A 194 143.95 70.40 REMARK 500 ASP A 300 81.98 -163.65 REMARK 500 ASP A 345 46.38 -91.29 REMARK 500 ILE A 346 -23.18 43.79 REMARK 500 THR A 407 132.42 77.44 REMARK 500 THR A 410 -39.09 -159.04 REMARK 500 LEU A 413 -158.48 -144.05 REMARK 500 SER A 448 -148.72 -136.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEN A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEN A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEN A 3001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEN A 4001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEN A 5001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEN A 6001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3B3F RELATED DB: PDB REMARK 900 RELATED ID: 3B3G RELATED DB: PDB REMARK 900 RELATED ID: 2OQB RELATED DB: PDB DBREF 3B3J A 28 507 UNP Q4AE70 CARM1_RAT 28 507 SEQRES 1 A 480 ALA THR VAL SER VAL PHE PRO GLY ALA ARG LEU LEU THR SEQRES 2 A 480 ILE GLY ASP ALA ASN GLY GLU ILE GLN ARG HIS ALA GLU SEQRES 3 A 480 GLN GLN ALA LEU ARG LEU GLU VAL ARG ALA GLY PRO ASP SEQRES 4 A 480 ALA ALA GLY ILE ALA LEU TYR SER HIS GLU ASP VAL CYS SEQRES 5 A 480 VAL PHE LYS CYS SER VAL SER ARG GLU THR GLU CYS SER SEQRES 6 A 480 ARG VAL GLY ARG GLN SER PHE ILE ILE THR LEU GLY CYS SEQRES 7 A 480 ASN SER VAL LEU ILE GLN PHE ALA THR PRO HIS ASP PHE SEQRES 8 A 480 CYS SER PHE TYR ASN ILE LEU LYS THR CYS ARG GLY HIS SEQRES 9 A 480 THR LEU GLU ARG SER VAL PHE SER GLU ARG THR GLU GLU SEQRES 10 A 480 SER SER ALA VAL GLN TYR PHE GLN PHE TYR GLY TYR LEU SEQRES 11 A 480 SER GLN GLN GLN ASN MET MET GLN ASP TYR VAL ARG THR SEQRES 12 A 480 GLY THR TYR GLN ARG ALA ILE LEU GLN ASN HIS THR ASP SEQRES 13 A 480 PHE LYS ASP LYS ILE VAL LEU ASP VAL GLY CYS GLY SER SEQRES 14 A 480 GLY ILE LEU SER PHE PHE ALA ALA GLN ALA GLY ALA ARG SEQRES 15 A 480 LYS ILE TYR ALA VAL GLU ALA SER THR MET ALA GLN HIS SEQRES 16 A 480 ALA GLU VAL LEU VAL LYS SER ASN ASN LEU THR ASP ARG SEQRES 17 A 480 ILE VAL VAL ILE PRO GLY LYS VAL GLU GLU VAL SER LEU SEQRES 18 A 480 PRO GLU GLN VAL ASP ILE ILE ILE SER GLU PRO MET GLY SEQRES 19 A 480 TYR MET LEU PHE ASN GLU ARG MET LEU GLU SER TYR LEU SEQRES 20 A 480 HIS ALA LYS LYS TYR LEU LYS PRO SER GLY ASN MET PHE SEQRES 21 A 480 PRO THR ILE GLY ASP VAL HIS LEU ALA PRO PHE THR ASP SEQRES 22 A 480 GLU GLN LEU TYR MET GLU GLN PHE THR LYS ALA ASN PHE SEQRES 23 A 480 TRP TYR GLN PRO SER PHE HIS GLY VAL ASP LEU SER ALA SEQRES 24 A 480 LEU ARG GLY ALA ALA VAL ASP GLU TYR PHE ARG GLN PRO SEQRES 25 A 480 VAL VAL ASP THR PHE ASP ILE ARG ILE LEU MET ALA LYS SEQRES 26 A 480 SER VAL LYS TYR THR VAL ASN PHE LEU GLU ALA LYS GLU SEQRES 27 A 480 GLY ASP LEU HIS ARG ILE GLU ILE PRO PHE LYS PHE HIS SEQRES 28 A 480 MET LEU HIS SER GLY LEU VAL HIS GLY LEU ALA PHE TRP SEQRES 29 A 480 PHE ASP VAL ALA PHE ILE GLY SER ILE MET THR VAL TRP SEQRES 30 A 480 LEU SER THR ALA PRO THR GLU PRO LEU THR HIS TRP TYR SEQRES 31 A 480 GLN VAL ARG CYS LEU PHE GLN SER PRO LEU PHE ALA LYS SEQRES 32 A 480 ALA GLY ASP THR LEU SER GLY THR CYS LEU LEU ILE ALA SEQRES 33 A 480 ASN LYS ARG GLN SER TYR ASP ILE SER ILE VAL ALA GLN SEQRES 34 A 480 VAL ASP GLN THR GLY SER LYS SER SER ASN LEU LEU ASP SEQRES 35 A 480 LEU LYS ASN PRO PHE PHE ARG TYR THR GLY THR THR PRO SEQRES 36 A 480 SER PRO PRO PRO GLY SER HIS TYR THR SER PRO SER GLU SEQRES 37 A 480 ASN MET TRP ASN THR GLY SER THR TYR ASN LEU SER HET BEN A1001 9 HET BEN A2001 9 HET BEN A3001 9 HET BEN A4001 9 HET BEN A5001 9 HET BEN A6001 9 HETNAM BEN BENZAMIDINE FORMUL 2 BEN 6(C7 H8 N2) FORMUL 8 HOH *35(H2 O) HELIX 1 1 TYR A 154 TYR A 156 5 3 HELIX 2 2 SER A 158 ASN A 180 1 23 HELIX 3 3 HIS A 181 PHE A 184 5 4 HELIX 4 4 GLY A 197 ALA A 206 1 10 HELIX 5 5 ALA A 216 ASN A 230 1 15 HELIX 6 6 MET A 260 PHE A 265 1 6 HELIX 7 7 ASN A 266 ALA A 276 1 11 HELIX 8 8 ASP A 300 GLN A 316 1 17 HELIX 9 9 LEU A 324 ALA A 326 5 3 HELIX 10 10 LEU A 327 PHE A 336 1 10 SHEET 1 A 3 GLN A 149 GLN A 152 0 SHEET 2 A 3 PHE A 474 TYR A 477 -1 O PHE A 475 N PHE A 151 SHEET 3 A 3 VAL A 340 VAL A 341 1 N VAL A 341 O PHE A 474 SHEET 1 B 5 ILE A 236 PRO A 240 0 SHEET 2 B 5 LYS A 210 GLU A 215 1 N ALA A 213 O ILE A 239 SHEET 3 B 5 ILE A 188 VAL A 192 1 N ASP A 191 O TYR A 212 SHEET 4 B 5 VAL A 252 ILE A 256 1 O ILE A 256 N LEU A 190 SHEET 5 B 5 LEU A 280 PHE A 287 1 O PHE A 287 N ILE A 255 SHEET 1 C 4 VAL A 354 ASN A 359 0 SHEET 2 C 4 ILE A 290 PHE A 298 -1 N GLY A 291 O VAL A 358 SHEET 3 C 4 GLY A 383 ILE A 397 -1 O ASP A 393 N ASP A 292 SHEET 4 C 4 THR A 402 TRP A 404 -1 O VAL A 403 N PHE A 396 SHEET 1 D 4 VAL A 354 ASN A 359 0 SHEET 2 D 4 ILE A 290 PHE A 298 -1 N GLY A 291 O VAL A 358 SHEET 3 D 4 GLY A 383 ILE A 397 -1 O ASP A 393 N ASP A 292 SHEET 4 D 4 TYR A 417 ALA A 429 -1 O VAL A 419 N PHE A 390 SHEET 1 E 4 ARG A 370 HIS A 378 0 SHEET 2 E 4 THR A 434 ALA A 443 -1 O CYS A 439 N ILE A 373 SHEET 3 E 4 TYR A 449 VAL A 457 -1 O ASP A 450 N ILE A 442 SHEET 4 E 4 LYS A 463 ASP A 469 -1 O LEU A 468 N ILE A 451 CISPEP 1 PHE A 287 PRO A 288 0 2.43 SITE 1 AC1 5 GLU A 334 ARG A 337 ASP A 450 LEU A 467 SITE 2 AC1 5 ASP A 469 SITE 1 AC2 6 PHE A 153 TYR A 156 LEU A 157 GLN A 165 SITE 2 AC2 6 PHE A 475 HOH A6030 SITE 1 AC3 5 HIS A 275 GLU A 365 ILE A 442 ASP A 450 SITE 2 AC3 5 SER A 452 SITE 1 AC4 7 PHE A 153 TYR A 154 TRP A 416 TYR A 417 SITE 2 AC4 7 GLN A 418 HOH A6009 HOH A6030 SITE 1 AC5 4 LYS A 277 LYS A 281 LEU A 361 GLU A 362 SITE 1 AC6 6 LEU A 264 LEU A 270 GLY A 291 ASP A 292 SITE 2 AC6 6 PHE A 360 ILE A 371 CRYST1 136.022 136.022 125.304 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007352 0.004245 0.000000 0.00000 SCALE2 0.000000 0.008489 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007981 0.00000