HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 25-OCT-07 3B57 TITLE CRYSTAL STRUCTURE OF THE LIN1889 PROTEIN (Q92AN1) FROM LISTERIA TITLE 2 INNOCUA. NORTHEAST STRUCTURAL CONSORTIUM TARGET LKR65 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIN1889 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA INNOCUA CLIP11262; SOURCE 3 ORGANISM_TAXID: 272626; SOURCE 4 STRAIN: CLIP11262 / SEROVAR 6A; SOURCE 5 GENE: LIN1889; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LIN1889, Q92AN1, NESG, STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, UNKNOWN KEYWDS 3 FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR A.P.KUZIN,M.ABASHIDZE,J.SEETHARAMAN,J.BENACH,F.FOROUHAR,S.M.VOROBIEV, AUTHOR 2 H.WANG,H.JANJUA,K.CUNNINGHAM,L.-C.MA,R.XIAO,J.LIU,M.C.BARAN, AUTHOR 3 T.B.ACTON,B.ROST,G.T.MONTELIONE,L.TONG,J.F.HUNT,NORTHEAST STRUCTURAL AUTHOR 4 GENOMICS CONSORTIUM (NESG) REVDAT 3 24-JAN-18 3B57 1 AUTHOR JRNL REVDAT 2 24-FEB-09 3B57 1 VERSN REVDAT 1 06-NOV-07 3B57 0 JRNL AUTH A.P.KUZIN,M.ABASHIDZE,J.SEETHARAMAN,J.BENACH,F.FOROUHAR, JRNL AUTH 2 S.M.VOROBIEV,H.WANG,H.JANJUA,K.CUNNINGHAM,L.-C.MA,R.XIAO, JRNL AUTH 3 J.LIU,M.C.BARAN,T.B.ACTON,B.ROST,G.T.MONTELIONE,L.TONG, JRNL AUTH 4 J.F.HUNT JRNL TITL CRYSTAL STRUCTURE OF THE LIN1889 PROTEIN (Q92AN1) FROM JRNL TITL 2 LISTERIA INNOCUA. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.72 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 69895.960 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 93.1 REMARK 3 NUMBER OF REFLECTIONS : 12200 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 624 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.010 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.19 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 84.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1721 REMARK 3 BIN R VALUE (WORKING SET) : 0.2850 REMARK 3 BIN FREE R VALUE : 0.3320 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 99 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.033 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1468 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.34 REMARK 3 ESD FROM SIGMAA (A) : 0.44 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.44 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.59 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.048 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 19.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.710 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.517 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.703 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.924 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.123 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : BULK SOLVENT MODEL USED REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 22.08 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : ION.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE FRIEDEL PAIRS WERE USED IN PHASING REMARK 4 REMARK 4 3B57 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-OCT-07. REMARK 100 THE DEPOSITION ID IS D_1000045093. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97900 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13151 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 44.720 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SNB REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: THE STRUCTURE FACTOR FILE CONTAINS FRIEDEL PAIRS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M (NH4)2HPO4, 100 MM MOPS, PH 7.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+3/4,X+1/4,-Z+1/4 REMARK 290 14555 -Y+3/4,-X+3/4,-Z+3/4 REMARK 290 15555 Y+1/4,-X+1/4,Z+3/4 REMARK 290 16555 -Y+1/4,X+3/4,Z+1/4 REMARK 290 17555 X+3/4,Z+1/4,-Y+1/4 REMARK 290 18555 -X+1/4,Z+3/4,Y+1/4 REMARK 290 19555 -X+3/4,-Z+3/4,-Y+3/4 REMARK 290 20555 X+1/4,-Z+1/4,Y+3/4 REMARK 290 21555 Z+3/4,Y+1/4,-X+1/4 REMARK 290 22555 Z+1/4,-Y+1/4,X+3/4 REMARK 290 23555 -Z+1/4,Y+3/4,X+1/4 REMARK 290 24555 -Z+3/4,-Y+3/4,-X+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 63.24350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.24350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 63.24350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.24350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 63.24350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 63.24350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 63.24350 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 63.24350 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 63.24350 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 63.24350 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 63.24350 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 63.24350 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 63.24350 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 63.24350 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 63.24350 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 63.24350 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 63.24350 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 63.24350 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 94.86525 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 31.62175 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 31.62175 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 94.86525 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 94.86525 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 94.86525 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 31.62175 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 31.62175 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 94.86525 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 31.62175 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 94.86525 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 31.62175 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 94.86525 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 31.62175 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 31.62175 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 31.62175 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 94.86525 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 31.62175 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 94.86525 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 94.86525 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 94.86525 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 31.62175 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 31.62175 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 94.86525 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 94.86525 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 31.62175 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 31.62175 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 31.62175 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 31.62175 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 94.86525 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 31.62175 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 94.86525 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 31.62175 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 94.86525 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 94.86525 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 94.86525 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2820 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 31.62175 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 158.10875 REMARK 350 BIOMT3 2 1.000000 0.000000 0.000000 -31.62175 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 19 REMARK 465 ASN A 20 REMARK 465 GLU A 21 REMARK 465 THR A 22 REMARK 465 THR A 23 REMARK 465 GLY A 24 REMARK 465 ILE A 63 REMARK 465 LYS A 64 REMARK 465 LEU A 65 REMARK 465 THR A 66 REMARK 465 THR A 67 REMARK 465 ASP A 68 REMARK 465 GLU A 69 REMARK 465 PHE A 102 REMARK 465 LYS A 103 REMARK 465 LYS A 104 REMARK 465 GLY A 105 REMARK 465 LYS A 106 REMARK 465 ASN A 107 REMARK 465 THR A 108 REMARK 465 PHE A 109 REMARK 465 LYS A 110 REMARK 465 ASN A 152 REMARK 465 HIS A 204 REMARK 465 HIS A 205 REMARK 465 HIS A 206 REMARK 465 HIS A 207 REMARK 465 HIS A 208 REMARK 465 HIS A 209 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 16 39.04 -83.53 REMARK 500 ASP A 26 -166.44 -77.38 REMARK 500 SER A 42 -5.91 -57.75 REMARK 500 VAL A 100 -78.95 -91.06 REMARK 500 HIS A 143 19.52 -144.55 REMARK 500 ASN A 149 90.77 -176.80 REMARK 500 LYS A 164 -84.06 -114.92 REMARK 500 LEU A 165 -68.96 -21.93 REMARK 500 LYS A 169 -31.81 -39.51 REMARK 500 ASN A 173 49.98 -109.65 REMARK 500 VAL A 201 84.79 58.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 210 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: LKR65 RELATED DB: TARGETDB REMARK 900 RELATED ID: 2QGS RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF SE1688 PROTEIN FROM STAPHYLOCOCCUS EPIDERMIDIS DBREF 3B57 A 1 201 UNP Q92AN1 Q92AN1_LISIN 1 201 SEQADV 3B57 LEU A 202 UNP Q92AN1 EXPRESSION TAG SEQADV 3B57 GLU A 203 UNP Q92AN1 EXPRESSION TAG SEQADV 3B57 HIS A 204 UNP Q92AN1 EXPRESSION TAG SEQADV 3B57 HIS A 205 UNP Q92AN1 EXPRESSION TAG SEQADV 3B57 HIS A 206 UNP Q92AN1 EXPRESSION TAG SEQADV 3B57 HIS A 207 UNP Q92AN1 EXPRESSION TAG SEQADV 3B57 HIS A 208 UNP Q92AN1 EXPRESSION TAG SEQADV 3B57 HIS A 209 UNP Q92AN1 EXPRESSION TAG SEQRES 1 A 209 MSE ASN LYS GLU GLU ILE ILE LEU SER ALA LYS ASN TRP SEQRES 2 A 209 MSE HIS SER HIS PHE GLU ASN GLU THR THR GLY HIS ASP SEQRES 3 A 209 TRP SER HIS ILE LYS ARG VAL TRP LYS LEU SER LYS GLU SEQRES 4 A 209 ILE GLN SER LYS GLU GLY GLY ASP LEU PHE THR ILE GLU SEQRES 5 A 209 LEU ALA ALA LEU PHE HIS ASP TYR SER ASP ILE LYS LEU SEQRES 6 A 209 THR THR ASP GLU GLN GLU ALA THR LYS THR LEU ILE ASN SEQRES 7 A 209 TRP MSE GLU THR LYS GLU ILE PRO SER GLU LEU ILE LYS SEQRES 8 A 209 LYS ILE ILE ARG ILE ILE GLN SER VAL SER PHE LYS LYS SEQRES 9 A 209 GLY LYS ASN THR PHE LYS ALA LEU THR ILE GLU GLU LYS SEQRES 10 A 209 ILE VAL GLN ASP ALA ASP ARG LEU ASP ALA ILE GLY ALA SEQRES 11 A 209 ILE GLY ILE ALA ARG THR PHE THR TYR GLY GLY ALA HIS SEQRES 12 A 209 ASN ARG GLU ILE ALA ASN GLN ASN ASN PRO LYS ASN THR SEQRES 13 A 209 THR LEU GLN HIS PHE TYR ASP LYS LEU LEU LEU ILE LYS SEQRES 14 A 209 ASP GLN LEU ASN THR GLU THR ALA LYS THR ILE ALA LYS SEQRES 15 A 209 GLU LYS GLN LYS ILE MSE GLN ASP PHE ILE GLN ALA LEU SEQRES 16 A 209 GLU LYS GLU LEU LYS VAL LEU GLU HIS HIS HIS HIS HIS SEQRES 17 A 209 HIS MODRES 3B57 MSE A 1 MET SELENOMETHIONINE MODRES 3B57 MSE A 14 MET SELENOMETHIONINE MODRES 3B57 MSE A 80 MET SELENOMETHIONINE MODRES 3B57 MSE A 188 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 14 8 HET MSE A 80 8 HET MSE A 188 8 HET MG A 210 1 HETNAM MSE SELENOMETHIONINE HETNAM MG MAGNESIUM ION FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 2 MG MG 2+ HELIX 1 1 ASN A 2 SER A 16 1 15 HELIX 2 2 ASP A 26 GLY A 45 1 20 HELIX 3 3 ASP A 47 HIS A 58 1 12 HELIX 4 4 GLN A 70 LYS A 83 1 14 HELIX 5 5 PRO A 86 SER A 101 1 16 HELIX 6 6 THR A 113 ASP A 126 1 14 HELIX 7 7 ILE A 128 GLY A 141 1 14 HELIX 8 8 THR A 156 LYS A 164 1 9 HELIX 9 9 LYS A 164 LEU A 172 1 9 HELIX 10 10 THR A 174 ILE A 180 1 7 HELIX 11 11 ALA A 181 LEU A 199 1 19 LINK C MSE A 1 N ASN A 2 1555 1555 1.33 LINK C TRP A 13 N MSE A 14 1555 1555 1.33 LINK C MSE A 14 N HIS A 15 1555 1555 1.33 LINK C TRP A 79 N MSE A 80 1555 1555 1.33 LINK C MSE A 80 N GLU A 81 1555 1555 1.33 LINK C ILE A 187 N MSE A 188 1555 1555 1.32 LINK C MSE A 188 N GLN A 189 1555 1555 1.33 SITE 1 AC1 4 HIS A 29 HIS A 58 ASP A 59 ASP A 123 CRYST1 126.487 126.487 126.487 90.00 90.00 90.00 P 41 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007906 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007906 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007906 0.00000 HETATM 1 N MSE A 1 70.683 35.557 49.134 1.00 82.56 N HETATM 2 CA MSE A 1 70.653 37.028 49.367 1.00 82.35 C HETATM 3 C MSE A 1 69.313 37.626 48.950 1.00 80.56 C HETATM 4 O MSE A 1 68.789 37.301 47.882 1.00 80.77 O HETATM 5 CB MSE A 1 71.774 37.705 48.577 1.00 85.35 C HETATM 6 CG MSE A 1 71.788 37.340 47.097 1.00 88.53 C HETATM 7 SE MSE A 1 72.576 38.701 45.931 1.00 94.49 SE HETATM 8 CE MSE A 1 71.131 38.864 44.674 1.00 90.85 C