HEADER TRANSFERASE 28-OCT-07 3B6B TITLE CRYSTAL STRUCTURE OF ACANTHAMOEBA POLYPHAGA MIMIVIRUS NUCLEOSIDE TITLE 2 DIPHOSPHATE KINASE COMPLEXED WITH DGDP COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOSIDE DIPHOSPHATE KINASE; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 SYNONYM: NDK, NDP KINASE; COMPND 5 EC: 2.7.4.6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACANTHAMOEBA POLYPHAGA MIMIVIRUS; SOURCE 3 ORGANISM_COMMON: APMV; SOURCE 4 ORGANISM_TAXID: 212035; SOURCE 5 GENE: NDK; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) ROSETTA PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PDIGS02 KEYWDS NDK, PHOSPHOTRANSFERASE, NUCLEOTIDE BINDING PROTEIN, ATP-BINDING, KEYWDS 2 KINASE, MAGNESIUM, METAL-BINDING, NUCLEOTIDE METABOLISM, NUCLEOTIDE- KEYWDS 3 BINDING, PHOSPHORYLATION, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.JEUDY,A.LARTIGUE,J.M.CLAVERIE,C.ABERGEL REVDAT 6 30-AUG-23 3B6B 1 REMARK SEQADV REVDAT 5 07-JUL-09 3B6B 1 JRNL REVDAT 4 26-MAY-09 3B6B 1 JRNL REVDAT 3 24-FEB-09 3B6B 1 VERSN REVDAT 2 25-NOV-08 3B6B 1 REMARK REVDAT 1 04-NOV-08 3B6B 0 JRNL AUTH S.JEUDY,A.LARTIGUE,J.M.CLAVERIE,C.ABERGEL JRNL TITL DISSECTING THE UNIQUE NUCLEOTIDE SPECIFICITY OF MIMIVIRUS JRNL TITL 2 NUCLEOSIDE DIPHOSPHATE KINASE. JRNL REF J.VIROL. V. 83 7142 2009 JRNL REFN ISSN 0022-538X JRNL PMID 19439473 JRNL DOI 10.1128/JVI.00511-09 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 70883 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3757 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5166 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.42 REMARK 3 BIN R VALUE (WORKING SET) : 0.2520 REMARK 3 BIN FREE R VALUE SET COUNT : 258 REMARK 3 BIN FREE R VALUE : 0.2860 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6303 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 168 REMARK 3 SOLVENT ATOMS : 327 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.03000 REMARK 3 B33 (A**2) : -0.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.161 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.145 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.101 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.611 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6599 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8937 ; 1.305 ; 1.990 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 778 ; 5.999 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 316 ;35.467 ;24.304 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1185 ;15.230 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 48 ;20.477 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 984 ; 0.100 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4912 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3038 ; 0.199 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 4541 ; 0.304 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 452 ; 0.131 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 3 ; 0.221 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 104 ; 0.213 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 13 ; 0.167 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4041 ; 0.699 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6340 ; 1.223 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2974 ; 1.673 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2597 ; 2.836 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3B6B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-DEC-07. REMARK 100 THE DEPOSITION ID IS D_1000045132. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-APR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM30A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98025 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 72791 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 76.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : 0.06000 REMARK 200 FOR THE DATA SET : 7.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.30300 REMARK 200 R SYM FOR SHELL (I) : 0.30300 REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1B8Q REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40-45% MPD, 0.1M HEPES, PH 7.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 92.06000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 92.06000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 39.91950 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 76.26400 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 39.91950 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 76.26400 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 92.06000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 39.91950 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 76.26400 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 92.06000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 39.91950 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 76.26400 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 159.67800 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 92.06000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -19 REMARK 465 TYR A -18 REMARK 465 TYR A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 LEU A -10 REMARK 465 GLU A -9 REMARK 465 SER A -8 REMARK 465 THR A -7 REMARK 465 SER A -6 REMARK 465 LEU A -5 REMARK 465 TYR A -4 REMARK 465 LYS A -3 REMARK 465 LYS A -2 REMARK 465 ALA A -1 REMARK 465 THR A 131 REMARK 465 LYS A 132 REMARK 465 MET A 133 REMARK 465 GLU A 134 REMARK 465 THR A 135 REMARK 465 ASP A 136 REMARK 465 ASN A 137 REMARK 465 SER B -19 REMARK 465 TYR B -18 REMARK 465 TYR B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 LEU B -10 REMARK 465 GLU B -9 REMARK 465 SER B -8 REMARK 465 THR B -7 REMARK 465 SER B -6 REMARK 465 LEU B -5 REMARK 465 TYR B -4 REMARK 465 LYS B -3 REMARK 465 LYS B -2 REMARK 465 ALA B -1 REMARK 465 GLY B 0 REMARK 465 GLU B 130 REMARK 465 THR B 131 REMARK 465 LYS B 132 REMARK 465 MET B 133 REMARK 465 GLU B 134 REMARK 465 THR B 135 REMARK 465 ASP B 136 REMARK 465 ASN B 137 REMARK 465 SER C -19 REMARK 465 TYR C -18 REMARK 465 TYR C -17 REMARK 465 HIS C -16 REMARK 465 HIS C -15 REMARK 465 HIS C -14 REMARK 465 HIS C -13 REMARK 465 HIS C -12 REMARK 465 HIS C -11 REMARK 465 LEU C -10 REMARK 465 GLU C -9 REMARK 465 SER C -8 REMARK 465 THR C -7 REMARK 465 SER C -6 REMARK 465 LEU C -5 REMARK 465 TYR C -4 REMARK 465 LYS C -3 REMARK 465 LYS C -2 REMARK 465 ALA C -1 REMARK 465 LYS C 132 REMARK 465 MET C 133 REMARK 465 GLU C 134 REMARK 465 THR C 135 REMARK 465 ASP C 136 REMARK 465 ASN C 137 REMARK 465 SER D -19 REMARK 465 TYR D -18 REMARK 465 TYR D -17 REMARK 465 HIS D -16 REMARK 465 HIS D -15 REMARK 465 HIS D -14 REMARK 465 HIS D -13 REMARK 465 HIS D -12 REMARK 465 HIS D -11 REMARK 465 LEU D -10 REMARK 465 GLU D -9 REMARK 465 SER D -8 REMARK 465 THR D -7 REMARK 465 SER D -6 REMARK 465 LEU D -5 REMARK 465 TYR D -4 REMARK 465 LYS D -3 REMARK 465 LYS D -2 REMARK 465 ALA D -1 REMARK 465 THR D 131 REMARK 465 LYS D 132 REMARK 465 MET D 133 REMARK 465 GLU D 134 REMARK 465 THR D 135 REMARK 465 ASP D 136 REMARK 465 ASN D 137 REMARK 465 SER E -19 REMARK 465 TYR E -18 REMARK 465 TYR E -17 REMARK 465 HIS E -16 REMARK 465 HIS E -15 REMARK 465 HIS E -14 REMARK 465 HIS E -13 REMARK 465 HIS E -12 REMARK 465 HIS E -11 REMARK 465 LEU E -10 REMARK 465 GLU E -9 REMARK 465 SER E -8 REMARK 465 THR E -7 REMARK 465 SER E -6 REMARK 465 LEU E -5 REMARK 465 TYR E -4 REMARK 465 LYS E -3 REMARK 465 LYS E -2 REMARK 465 ALA E -1 REMARK 465 THR E 131 REMARK 465 LYS E 132 REMARK 465 MET E 133 REMARK 465 GLU E 134 REMARK 465 THR E 135 REMARK 465 ASP E 136 REMARK 465 ASN E 137 REMARK 465 SER F -19 REMARK 465 TYR F -18 REMARK 465 TYR F -17 REMARK 465 HIS F -16 REMARK 465 HIS F -15 REMARK 465 HIS F -14 REMARK 465 HIS F -13 REMARK 465 HIS F -12 REMARK 465 HIS F -11 REMARK 465 LEU F -10 REMARK 465 GLU F -9 REMARK 465 SER F -8 REMARK 465 THR F -7 REMARK 465 SER F -6 REMARK 465 LEU F -5 REMARK 465 TYR F -4 REMARK 465 LYS F -3 REMARK 465 LYS F -2 REMARK 465 ALA F -1 REMARK 465 GLU F 130 REMARK 465 THR F 131 REMARK 465 LYS F 132 REMARK 465 MET F 133 REMARK 465 GLU F 134 REMARK 465 THR F 135 REMARK 465 ASP F 136 REMARK 465 ASN F 137 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 MG MG D 138 O2B DGI D 142 1.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 104 40.65 -151.77 REMARK 500 LEU A 110 -43.46 75.59 REMARK 500 ASN B 29 20.87 80.12 REMARK 500 ASN B 104 41.79 -151.40 REMARK 500 LEU B 110 -38.61 76.20 REMARK 500 ASN C 104 39.39 -145.79 REMARK 500 LEU C 110 -38.10 75.69 REMARK 500 GLU C 130 53.79 -69.18 REMARK 500 ASN D 29 20.44 81.41 REMARK 500 ASN D 104 40.37 -148.67 REMARK 500 LEU D 110 -41.54 73.65 REMARK 500 ASN E 104 39.78 -155.13 REMARK 500 LEU E 110 -40.43 79.47 REMARK 500 ASN F 104 41.17 -150.71 REMARK 500 LEU F 110 -37.36 76.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 138 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 138 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 138 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DGI A 139 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DGI B 140 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DGI C 141 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DGI D 142 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DGI E 143 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DGI F 144 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2B8P RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ACANTHAMOEBA POLYPHAGA MIMIVIRUS NDK, THE REMARK 900 FIRST VIRAL NUCLEOSIDE DIPHOSPHATE KINASE DBREF 3B6B A 2 137 UNP Q5UQL3 NDK_MIMIV 2 137 DBREF 3B6B B 2 137 UNP Q5UQL3 NDK_MIMIV 2 137 DBREF 3B6B C 2 137 UNP Q5UQL3 NDK_MIMIV 2 137 DBREF 3B6B D 2 137 UNP Q5UQL3 NDK_MIMIV 2 137 DBREF 3B6B E 2 137 UNP Q5UQL3 NDK_MIMIV 2 137 DBREF 3B6B F 2 137 UNP Q5UQL3 NDK_MIMIV 2 137 SEQADV 3B6B SER A -19 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B TYR A -18 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B TYR A -17 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS A -16 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS A -15 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS A -14 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS A -13 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS A -12 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS A -11 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LEU A -10 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B GLU A -9 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B SER A -8 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B THR A -7 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B SER A -6 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LEU A -5 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B TYR A -4 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LYS A -3 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LYS A -2 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B ALA A -1 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B GLY A 0 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LEU A 1 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B SER B -19 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B TYR B -18 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B TYR B -17 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS B -16 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS B -15 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS B -14 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS B -13 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS B -12 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS B -11 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LEU B -10 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B GLU B -9 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B SER B -8 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B THR B -7 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B SER B -6 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LEU B -5 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B TYR B -4 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LYS B -3 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LYS B -2 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B ALA B -1 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B GLY B 0 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LEU B 1 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B SER C -19 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B TYR C -18 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B TYR C -17 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS C -16 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS C -15 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS C -14 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS C -13 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS C -12 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS C -11 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LEU C -10 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B GLU C -9 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B SER C -8 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B THR C -7 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B SER C -6 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LEU C -5 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B TYR C -4 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LYS C -3 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LYS C -2 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B ALA C -1 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B GLY C 0 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LEU C 1 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B SER D -19 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B TYR D -18 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B TYR D -17 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS D -16 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS D -15 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS D -14 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS D -13 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS D -12 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS D -11 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LEU D -10 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B GLU D -9 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B SER D -8 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B THR D -7 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B SER D -6 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LEU D -5 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B TYR D -4 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LYS D -3 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LYS D -2 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B ALA D -1 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B GLY D 0 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LEU D 1 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B SER E -19 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B TYR E -18 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B TYR E -17 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS E -16 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS E -15 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS E -14 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS E -13 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS E -12 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS E -11 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LEU E -10 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B GLU E -9 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B SER E -8 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B THR E -7 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B SER E -6 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LEU E -5 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B TYR E -4 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LYS E -3 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LYS E -2 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B ALA E -1 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B GLY E 0 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LEU E 1 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B SER F -19 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B TYR F -18 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B TYR F -17 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS F -16 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS F -15 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS F -14 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS F -13 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS F -12 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B HIS F -11 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LEU F -10 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B GLU F -9 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B SER F -8 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B THR F -7 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B SER F -6 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LEU F -5 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B TYR F -4 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LYS F -3 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LYS F -2 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B ALA F -1 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B GLY F 0 UNP Q5UQL3 EXPRESSION TAG SEQADV 3B6B LEU F 1 UNP Q5UQL3 EXPRESSION TAG SEQRES 1 A 157 SER TYR TYR HIS HIS HIS HIS HIS HIS LEU GLU SER THR SEQRES 2 A 157 SER LEU TYR LYS LYS ALA GLY LEU GLN ARG THR LEU VAL SEQRES 3 A 157 LEU ILE LYS PRO ASP ALA PHE GLU ARG SER LEU VAL ALA SEQRES 4 A 157 GLU ILE MET GLY ARG ILE GLU LYS LYS ASN PHE LYS ILE SEQRES 5 A 157 VAL SER MET LYS PHE TRP SER LYS ALA PRO ARG ASN LEU SEQRES 6 A 157 ILE GLU GLN HIS TYR LYS GLU HIS SER GLU GLN SER TYR SEQRES 7 A 157 PHE ASN ASP ASN CYS ASP PHE MET VAL SER GLY PRO ILE SEQRES 8 A 157 ILE SER ILE VAL TYR GLU GLY THR ASP ALA ILE SER LYS SEQRES 9 A 157 ILE ARG ARG LEU GLN GLY ASN ILE LEU THR PRO GLY THR SEQRES 10 A 157 ILE ARG GLY ASP LEU ALA ASN ASP ILE ARG GLU ASN LEU SEQRES 11 A 157 ILE HIS ALA SER ASP SER GLU ASP SER ALA VAL ASP GLU SEQRES 12 A 157 ILE SER ILE TRP PHE PRO GLU THR LYS MET GLU THR ASP SEQRES 13 A 157 ASN SEQRES 1 B 157 SER TYR TYR HIS HIS HIS HIS HIS HIS LEU GLU SER THR SEQRES 2 B 157 SER LEU TYR LYS LYS ALA GLY LEU GLN ARG THR LEU VAL SEQRES 3 B 157 LEU ILE LYS PRO ASP ALA PHE GLU ARG SER LEU VAL ALA SEQRES 4 B 157 GLU ILE MET GLY ARG ILE GLU LYS LYS ASN PHE LYS ILE SEQRES 5 B 157 VAL SER MET LYS PHE TRP SER LYS ALA PRO ARG ASN LEU SEQRES 6 B 157 ILE GLU GLN HIS TYR LYS GLU HIS SER GLU GLN SER TYR SEQRES 7 B 157 PHE ASN ASP ASN CYS ASP PHE MET VAL SER GLY PRO ILE SEQRES 8 B 157 ILE SER ILE VAL TYR GLU GLY THR ASP ALA ILE SER LYS SEQRES 9 B 157 ILE ARG ARG LEU GLN GLY ASN ILE LEU THR PRO GLY THR SEQRES 10 B 157 ILE ARG GLY ASP LEU ALA ASN ASP ILE ARG GLU ASN LEU SEQRES 11 B 157 ILE HIS ALA SER ASP SER GLU ASP SER ALA VAL ASP GLU SEQRES 12 B 157 ILE SER ILE TRP PHE PRO GLU THR LYS MET GLU THR ASP SEQRES 13 B 157 ASN SEQRES 1 C 157 SER TYR TYR HIS HIS HIS HIS HIS HIS LEU GLU SER THR SEQRES 2 C 157 SER LEU TYR LYS LYS ALA GLY LEU GLN ARG THR LEU VAL SEQRES 3 C 157 LEU ILE LYS PRO ASP ALA PHE GLU ARG SER LEU VAL ALA SEQRES 4 C 157 GLU ILE MET GLY ARG ILE GLU LYS LYS ASN PHE LYS ILE SEQRES 5 C 157 VAL SER MET LYS PHE TRP SER LYS ALA PRO ARG ASN LEU SEQRES 6 C 157 ILE GLU GLN HIS TYR LYS GLU HIS SER GLU GLN SER TYR SEQRES 7 C 157 PHE ASN ASP ASN CYS ASP PHE MET VAL SER GLY PRO ILE SEQRES 8 C 157 ILE SER ILE VAL TYR GLU GLY THR ASP ALA ILE SER LYS SEQRES 9 C 157 ILE ARG ARG LEU GLN GLY ASN ILE LEU THR PRO GLY THR SEQRES 10 C 157 ILE ARG GLY ASP LEU ALA ASN ASP ILE ARG GLU ASN LEU SEQRES 11 C 157 ILE HIS ALA SER ASP SER GLU ASP SER ALA VAL ASP GLU SEQRES 12 C 157 ILE SER ILE TRP PHE PRO GLU THR LYS MET GLU THR ASP SEQRES 13 C 157 ASN SEQRES 1 D 157 SER TYR TYR HIS HIS HIS HIS HIS HIS LEU GLU SER THR SEQRES 2 D 157 SER LEU TYR LYS LYS ALA GLY LEU GLN ARG THR LEU VAL SEQRES 3 D 157 LEU ILE LYS PRO ASP ALA PHE GLU ARG SER LEU VAL ALA SEQRES 4 D 157 GLU ILE MET GLY ARG ILE GLU LYS LYS ASN PHE LYS ILE SEQRES 5 D 157 VAL SER MET LYS PHE TRP SER LYS ALA PRO ARG ASN LEU SEQRES 6 D 157 ILE GLU GLN HIS TYR LYS GLU HIS SER GLU GLN SER TYR SEQRES 7 D 157 PHE ASN ASP ASN CYS ASP PHE MET VAL SER GLY PRO ILE SEQRES 8 D 157 ILE SER ILE VAL TYR GLU GLY THR ASP ALA ILE SER LYS SEQRES 9 D 157 ILE ARG ARG LEU GLN GLY ASN ILE LEU THR PRO GLY THR SEQRES 10 D 157 ILE ARG GLY ASP LEU ALA ASN ASP ILE ARG GLU ASN LEU SEQRES 11 D 157 ILE HIS ALA SER ASP SER GLU ASP SER ALA VAL ASP GLU SEQRES 12 D 157 ILE SER ILE TRP PHE PRO GLU THR LYS MET GLU THR ASP SEQRES 13 D 157 ASN SEQRES 1 E 157 SER TYR TYR HIS HIS HIS HIS HIS HIS LEU GLU SER THR SEQRES 2 E 157 SER LEU TYR LYS LYS ALA GLY LEU GLN ARG THR LEU VAL SEQRES 3 E 157 LEU ILE LYS PRO ASP ALA PHE GLU ARG SER LEU VAL ALA SEQRES 4 E 157 GLU ILE MET GLY ARG ILE GLU LYS LYS ASN PHE LYS ILE SEQRES 5 E 157 VAL SER MET LYS PHE TRP SER LYS ALA PRO ARG ASN LEU SEQRES 6 E 157 ILE GLU GLN HIS TYR LYS GLU HIS SER GLU GLN SER TYR SEQRES 7 E 157 PHE ASN ASP ASN CYS ASP PHE MET VAL SER GLY PRO ILE SEQRES 8 E 157 ILE SER ILE VAL TYR GLU GLY THR ASP ALA ILE SER LYS SEQRES 9 E 157 ILE ARG ARG LEU GLN GLY ASN ILE LEU THR PRO GLY THR SEQRES 10 E 157 ILE ARG GLY ASP LEU ALA ASN ASP ILE ARG GLU ASN LEU SEQRES 11 E 157 ILE HIS ALA SER ASP SER GLU ASP SER ALA VAL ASP GLU SEQRES 12 E 157 ILE SER ILE TRP PHE PRO GLU THR LYS MET GLU THR ASP SEQRES 13 E 157 ASN SEQRES 1 F 157 SER TYR TYR HIS HIS HIS HIS HIS HIS LEU GLU SER THR SEQRES 2 F 157 SER LEU TYR LYS LYS ALA GLY LEU GLN ARG THR LEU VAL SEQRES 3 F 157 LEU ILE LYS PRO ASP ALA PHE GLU ARG SER LEU VAL ALA SEQRES 4 F 157 GLU ILE MET GLY ARG ILE GLU LYS LYS ASN PHE LYS ILE SEQRES 5 F 157 VAL SER MET LYS PHE TRP SER LYS ALA PRO ARG ASN LEU SEQRES 6 F 157 ILE GLU GLN HIS TYR LYS GLU HIS SER GLU GLN SER TYR SEQRES 7 F 157 PHE ASN ASP ASN CYS ASP PHE MET VAL SER GLY PRO ILE SEQRES 8 F 157 ILE SER ILE VAL TYR GLU GLY THR ASP ALA ILE SER LYS SEQRES 9 F 157 ILE ARG ARG LEU GLN GLY ASN ILE LEU THR PRO GLY THR SEQRES 10 F 157 ILE ARG GLY ASP LEU ALA ASN ASP ILE ARG GLU ASN LEU SEQRES 11 F 157 ILE HIS ALA SER ASP SER GLU ASP SER ALA VAL ASP GLU SEQRES 12 F 157 ILE SER ILE TRP PHE PRO GLU THR LYS MET GLU THR ASP SEQRES 13 F 157 ASN HET MG A 138 1 HET DGI A 139 27 HET MG B 138 1 HET DGI B 140 27 HET MG C 138 1 HET DGI C 141 27 HET MG D 138 1 HET DGI D 142 27 HET MG E 138 1 HET DGI E 143 27 HET MG F 138 1 HET DGI F 144 27 HETNAM MG MAGNESIUM ION HETNAM DGI 2'-DEOXYGUANOSINE-5'-DIPHOSPHATE FORMUL 7 MG 6(MG 2+) FORMUL 8 DGI 6(C10 H15 N5 O10 P2) FORMUL 19 HOH *327(H2 O) HELIX 1 1 LYS A 9 ARG A 15 1 7 HELIX 2 2 LEU A 17 LYS A 28 1 12 HELIX 3 3 PRO A 42 TYR A 50 1 9 HELIX 4 4 LYS A 51 SER A 54 5 4 HELIX 5 5 TYR A 58 VAL A 67 1 10 HELIX 6 6 ASP A 80 GLY A 90 1 11 HELIX 7 7 THR A 97 ALA A 103 1 7 HELIX 8 8 SER A 116 PHE A 128 1 13 HELIX 9 9 LYS B 9 ARG B 15 1 7 HELIX 10 10 LEU B 17 LYS B 28 1 12 HELIX 11 11 PRO B 42 TYR B 50 1 9 HELIX 12 12 LYS B 51 SER B 54 5 4 HELIX 13 13 TYR B 58 VAL B 67 1 10 HELIX 14 14 ASP B 80 GLY B 90 1 11 HELIX 15 15 THR B 97 ALA B 103 1 7 HELIX 16 16 SER B 116 PHE B 128 1 13 HELIX 17 17 LYS C 9 ARG C 15 1 7 HELIX 18 18 LEU C 17 LYS C 28 1 12 HELIX 19 19 PRO C 42 TYR C 50 1 9 HELIX 20 20 LYS C 51 SER C 54 5 4 HELIX 21 21 TYR C 58 VAL C 67 1 10 HELIX 22 22 ASP C 80 GLY C 90 1 11 HELIX 23 23 THR C 97 ALA C 103 1 7 HELIX 24 24 SER C 116 PHE C 128 1 13 HELIX 25 25 LYS D 9 ARG D 15 1 7 HELIX 26 26 LEU D 17 LYS D 28 1 12 HELIX 27 27 PRO D 42 TYR D 50 1 9 HELIX 28 28 LYS D 51 SER D 54 5 4 HELIX 29 29 TYR D 58 SER D 68 1 11 HELIX 30 30 ASP D 80 GLY D 90 1 11 HELIX 31 31 THR D 97 ALA D 103 1 7 HELIX 32 32 SER D 116 PHE D 128 1 13 HELIX 33 33 LYS E 9 ARG E 15 1 7 HELIX 34 34 LEU E 17 LYS E 28 1 12 HELIX 35 35 PRO E 42 TYR E 50 1 9 HELIX 36 36 LYS E 51 SER E 54 5 4 HELIX 37 37 TYR E 58 VAL E 67 1 10 HELIX 38 38 ASP E 80 GLY E 90 1 11 HELIX 39 39 THR E 97 ALA E 103 1 7 HELIX 40 40 SER E 116 PHE E 128 1 13 HELIX 41 41 LYS F 9 ARG F 15 1 7 HELIX 42 42 LEU F 17 LYS F 28 1 12 HELIX 43 43 PRO F 42 TYR F 50 1 9 HELIX 44 44 LYS F 51 SER F 54 5 4 HELIX 45 45 TYR F 58 VAL F 67 1 10 HELIX 46 46 ASP F 80 GLY F 90 1 11 HELIX 47 47 THR F 97 ALA F 103 1 7 HELIX 48 48 SER F 116 PHE F 128 1 13 SHEET 1 A 4 LYS A 31 TRP A 38 0 SHEET 2 A 4 ILE A 71 THR A 79 -1 O VAL A 75 N VAL A 33 SHEET 3 A 4 LEU A 1 ILE A 8 -1 N VAL A 6 O ILE A 74 SHEET 4 A 4 ILE A 111 ALA A 113 -1 O HIS A 112 N LEU A 7 SHEET 1 B 4 LYS B 31 TRP B 38 0 SHEET 2 B 4 ILE B 71 GLY B 78 -1 O ILE B 71 N TRP B 38 SHEET 3 B 4 GLN B 2 ILE B 8 -1 N VAL B 6 O ILE B 74 SHEET 4 B 4 ILE B 111 ALA B 113 -1 O HIS B 112 N LEU B 7 SHEET 1 C 4 LYS C 31 TRP C 38 0 SHEET 2 C 4 ILE C 71 THR C 79 -1 O VAL C 75 N VAL C 33 SHEET 3 C 4 LEU C 1 ILE C 8 -1 N VAL C 6 O ILE C 74 SHEET 4 C 4 ILE C 111 ALA C 113 -1 O HIS C 112 N LEU C 7 SHEET 1 D 4 LYS D 31 TRP D 38 0 SHEET 2 D 4 ILE D 71 THR D 79 -1 O VAL D 75 N VAL D 33 SHEET 3 D 4 LEU D 1 ILE D 8 -1 N VAL D 6 O ILE D 74 SHEET 4 D 4 ILE D 111 ALA D 113 -1 O HIS D 112 N LEU D 7 SHEET 1 E 4 LYS E 31 TRP E 38 0 SHEET 2 E 4 ILE E 71 THR E 79 -1 O VAL E 75 N VAL E 33 SHEET 3 E 4 LEU E 1 ILE E 8 -1 N VAL E 6 O ILE E 74 SHEET 4 E 4 ILE E 111 ALA E 113 -1 O HIS E 112 N LEU E 7 SHEET 1 F 4 LYS F 31 TRP F 38 0 SHEET 2 F 4 ILE F 71 THR F 79 -1 O VAL F 75 N SER F 34 SHEET 3 F 4 LEU F 1 ILE F 8 -1 N VAL F 6 O ILE F 74 SHEET 4 F 4 ILE F 111 ALA F 113 -1 O HIS F 112 N LEU F 7 SITE 1 AC1 2 ARG A 86 ARG A 99 SITE 1 AC2 1 HIS B 53 SITE 1 AC3 2 ARG D 86 ARG D 99 SITE 1 AC4 11 LYS A 9 HIS A 53 TYR A 58 ASN A 62 SITE 2 AC4 11 ARG A 86 ARG A 99 ILE A 106 ARG A 107 SITE 3 AC4 11 ASN A 109 ASP A 115 HOH A 181 SITE 1 AC5 10 LYS B 9 TYR B 50 HIS B 53 TYR B 58 SITE 2 AC5 10 ARG B 86 ARG B 99 ILE B 106 ARG B 107 SITE 3 AC5 10 ASN B 109 HIS B 112 SITE 1 AC6 12 LYS C 9 TYR C 50 HIS C 53 TYR C 58 SITE 2 AC6 12 ASN C 62 ARG C 86 ARG C 99 ILE C 106 SITE 3 AC6 12 ARG C 107 ASN C 109 HIS C 112 HOH C 185 SITE 1 AC7 9 LYS D 9 HIS D 53 TYR D 58 ASN D 62 SITE 2 AC7 9 ARG D 86 ARG D 99 ILE D 106 ARG D 107 SITE 3 AC7 9 ASN D 109 SITE 1 AC8 10 LYS E 9 HIS E 53 TYR E 58 ASN E 62 SITE 2 AC8 10 ARG E 86 ARG E 99 ILE E 106 ARG E 107 SITE 3 AC8 10 ASN E 109 HOH E 202 SITE 1 AC9 12 LYS F 9 TYR F 50 HIS F 53 TYR F 58 SITE 2 AC9 12 ASN F 62 ARG F 86 GLN F 89 ARG F 99 SITE 3 AC9 12 ILE F 106 ARG F 107 ASN F 109 HIS F 112 CRYST1 79.839 152.528 184.120 90.00 90.00 90.00 C 2 2 21 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012525 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006556 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005431 0.00000