data_3B6L # _entry.id 3B6L # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3B6L pdb_00003b6l 10.2210/pdb3b6l/pdb RCSB RCSB045142 ? ? WWPDB D_1000045142 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3B6L _pdbx_database_status.recvd_initial_deposition_date 2007-10-29 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Michaux, C.' 1 'Pouyez, J.' 2 'Wouters, J.' 3 'Prive, G.G.' 4 # _citation.id primary _citation.title 'Protecting role of cosolvents in protein denaturation by SDS: a structural study.' _citation.journal_abbrev 'BMC Struct.Biol.' _citation.journal_volume 8 _citation.page_first 29 _citation.page_last 35 _citation.year 2008 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1472-6807 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18522744 _citation.pdbx_database_id_DOI 10.1186/1472-6807-8-29 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Michaux, C.' 1 ? primary 'Pouyez, J.' 2 ? primary 'Wouters, J.' 3 ? primary 'Prive, G.G.' 4 ? # _cell.entry_id 3B6L _cell.length_a 77.595 _cell.length_b 77.595 _cell.length_c 37.567 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3B6L _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Lysozyme C' 16257.660 1 3.2.1.17 ? ? ? 2 non-polymer syn 'DODECYL SULFATE' 266.397 1 ? ? ? ? 3 water nat water 18.015 64 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '1,4-beta-N-acetylmuramidase C, Allergen Gal d 4, Allergen Gal d IV' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MRSLLILVLCFLPLAALGKVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRW WCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; _entity_poly.pdbx_seq_one_letter_code_can ;MRSLLILVLCFLPLAALGKVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRW WCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ARG n 1 3 SER n 1 4 LEU n 1 5 LEU n 1 6 ILE n 1 7 LEU n 1 8 VAL n 1 9 LEU n 1 10 CYS n 1 11 PHE n 1 12 LEU n 1 13 PRO n 1 14 LEU n 1 15 ALA n 1 16 ALA n 1 17 LEU n 1 18 GLY n 1 19 LYS n 1 20 VAL n 1 21 PHE n 1 22 GLY n 1 23 ARG n 1 24 CYS n 1 25 GLU n 1 26 LEU n 1 27 ALA n 1 28 ALA n 1 29 ALA n 1 30 MET n 1 31 LYS n 1 32 ARG n 1 33 HIS n 1 34 GLY n 1 35 LEU n 1 36 ASP n 1 37 ASN n 1 38 TYR n 1 39 ARG n 1 40 GLY n 1 41 TYR n 1 42 SER n 1 43 LEU n 1 44 GLY n 1 45 ASN n 1 46 TRP n 1 47 VAL n 1 48 CYS n 1 49 ALA n 1 50 ALA n 1 51 LYS n 1 52 PHE n 1 53 GLU n 1 54 SER n 1 55 ASN n 1 56 PHE n 1 57 ASN n 1 58 THR n 1 59 GLN n 1 60 ALA n 1 61 THR n 1 62 ASN n 1 63 ARG n 1 64 ASN n 1 65 THR n 1 66 ASP n 1 67 GLY n 1 68 SER n 1 69 THR n 1 70 ASP n 1 71 TYR n 1 72 GLY n 1 73 ILE n 1 74 LEU n 1 75 GLN n 1 76 ILE n 1 77 ASN n 1 78 SER n 1 79 ARG n 1 80 TRP n 1 81 TRP n 1 82 CYS n 1 83 ASN n 1 84 ASP n 1 85 GLY n 1 86 ARG n 1 87 THR n 1 88 PRO n 1 89 GLY n 1 90 SER n 1 91 ARG n 1 92 ASN n 1 93 LEU n 1 94 CYS n 1 95 ASN n 1 96 ILE n 1 97 PRO n 1 98 CYS n 1 99 SER n 1 100 ALA n 1 101 LEU n 1 102 LEU n 1 103 SER n 1 104 SER n 1 105 ASP n 1 106 ILE n 1 107 THR n 1 108 ALA n 1 109 SER n 1 110 VAL n 1 111 ASN n 1 112 CYS n 1 113 ALA n 1 114 LYS n 1 115 LYS n 1 116 ILE n 1 117 VAL n 1 118 SER n 1 119 ASP n 1 120 GLY n 1 121 ASN n 1 122 GLY n 1 123 MET n 1 124 ASN n 1 125 ALA n 1 126 TRP n 1 127 VAL n 1 128 ALA n 1 129 TRP n 1 130 ARG n 1 131 ASN n 1 132 ARG n 1 133 CYS n 1 134 LYS n 1 135 GLY n 1 136 THR n 1 137 ASP n 1 138 VAL n 1 139 GLN n 1 140 ALA n 1 141 TRP n 1 142 ILE n 1 143 ARG n 1 144 GLY n 1 145 CYS n 1 146 ARG n 1 147 LEU n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name Chicken _entity_src_nat.pdbx_organism_scientific 'Gallus gallus' _entity_src_nat.pdbx_ncbi_taxonomy_id ? _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue 'egg white' _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LYSC_CHICK _struct_ref.pdbx_db_accession P00698 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MRSLLILVLCFLPLAALGKVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRW WCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3B6L _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 147 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00698 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 147 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1983 _struct_ref_seq.pdbx_auth_seq_align_end 2129 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SDS non-polymer . 'DODECYL SULFATE' ? 'C12 H26 O4 S' 266.397 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3B6L _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.70 _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 300 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_details '100mM sodium acetate buffer pH 4.6 and 2M sodium formate, VAPOR DIFFUSION, HANGING DROP, temperature 300K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'BRUKER PROTEUM' _diffrn_detector.pdbx_collection_date 2005-11-23 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3B6L _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 34.7 _reflns.d_resolution_high 2.3 _reflns.number_obs 5468 _reflns.number_all ? _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.082 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 21.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.3 _reflns_shell.d_res_low ? _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.022 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 8.5 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3B6L _refine.ls_number_reflns_obs 5195 _refine.ls_number_reflns_all 5088 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 34.7 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 99.72 _refine.ls_R_factor_obs 0.20236 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20180 _refine.ls_R_factor_R_free 0.21400 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.5 _refine.ls_number_reflns_R_free 244 _refine.ls_number_parameters 4351 _refine.ls_number_restraints 4208 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.912 _refine.correlation_coeff_Fo_to_Fc_free 0.903 _refine.B_iso_mean 16.934 _refine.aniso_B[1][1] -0.32 _refine.aniso_B[2][2] -0.32 _refine.aniso_B[3][3] 0.64 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 1Z55 _refine.pdbx_method_to_determine_struct 'AB INITIO' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.621 _refine.pdbx_overall_ESU_R_Free 0.234 _refine.overall_SU_ML 0.123 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 4.978 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3B6L _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 0 _refine_analyze.occupancy_sum_hydrogen 0.00 _refine_analyze.occupancy_sum_non_hydrogen 1083.00 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1001 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 17 _refine_hist.number_atoms_solvent 64 _refine_hist.number_atoms_total 1082 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 34.7 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.028 0.021 ? 1037 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.781 1.918 ? 1402 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.409 5.000 ? 128 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 38.857 22.857 ? 49 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 21.229 15.000 ? 164 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 22.302 15.000 ? 11 'X-RAY DIFFRACTION' ? r_chiral_restr 0.070 0.200 ? 145 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 790 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.265 0.200 ? 640 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.323 0.200 ? 700 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.232 0.200 ? 91 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.253 0.200 ? 41 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.254 0.200 ? 18 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 4.122 1.500 ? 645 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 6.421 2.000 ? 1007 'X-RAY DIFFRACTION' ? r_scbond_it 8.511 3.000 ? 457 'X-RAY DIFFRACTION' ? r_scangle_it 9.285 4.500 ? 395 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.300 _refine_ls_shell.d_res_low 2.360 _refine_ls_shell.number_reflns_R_work 380 _refine_ls_shell.R_factor_R_work 0.297 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.341 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 14 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine.entry_id 3B6L _pdbx_refine.R_factor_all_no_cutoff 0.1976 _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff 0.1827 _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff 4669 _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3B6L _struct.title 'Crystal structure of lysozyme folded in SDS and 2-methyl-2,4-pentanediol' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3B6L _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'egg-white lysozyme, protein-SDS complex, MPD, Allergen, Antimicrobial, Bacteriolytic enzyme, Glycosidase, Hydrolase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 22 ? HIS A 33 ? GLY A 2004 HIS A 2015 1 ? 12 HELX_P HELX_P2 2 ASN A 37 ? TYR A 41 ? ASN A 2019 TYR A 2023 5 ? 5 HELX_P HELX_P3 3 SER A 42 ? ASN A 55 ? SER A 2024 ASN A 2037 1 ? 14 HELX_P HELX_P4 4 PRO A 97 ? SER A 103 ? PRO A 2079 SER A 2085 5 ? 7 HELX_P HELX_P5 5 ILE A 106 ? VAL A 117 ? ILE A 2088 VAL A 2099 1 ? 12 HELX_P HELX_P6 6 ASN A 121 ? ALA A 125 ? ASN A 2103 ALA A 2107 5 ? 5 HELX_P HELX_P7 7 TRP A 126 ? CYS A 133 ? TRP A 2108 CYS A 2115 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 24 SG ? ? ? 1_555 A CYS 145 SG ? ? A CYS 2006 A CYS 2127 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf2 disulf ? ? A CYS 48 SG ? ? ? 1_555 A CYS 133 SG ? ? A CYS 2030 A CYS 2115 1_555 ? ? ? ? ? ? ? 2.016 ? ? disulf3 disulf ? ? A CYS 82 SG ? ? ? 1_555 A CYS 98 SG ? ? A CYS 2064 A CYS 2080 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf4 disulf ? ? A CYS 94 SG ? ? ? 1_555 A CYS 112 SG ? ? A CYS 2076 A CYS 2094 1_555 ? ? ? ? ? ? ? 2.022 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 61 ? ARG A 63 ? THR A 2043 ARG A 2045 A 2 THR A 69 ? TYR A 71 ? THR A 2051 TYR A 2053 A 3 ILE A 76 ? ASN A 77 ? ILE A 2058 ASN A 2059 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASN A 62 ? N ASN A 2044 O ASP A 70 ? O ASP A 2052 A 2 3 N TYR A 71 ? N TYR A 2053 O ILE A 76 ? O ILE A 2058 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id SDS _struct_site.pdbx_auth_seq_id 2300 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 13 _struct_site.details 'BINDING SITE FOR RESIDUE SDS A 2300' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 13 SER A 78 ? SER A 2060 . ? 1_555 ? 2 AC1 13 CYS A 82 ? CYS A 2064 . ? 1_555 ? 3 AC1 13 ASN A 83 ? ASN A 2065 . ? 1_555 ? 4 AC1 13 ASP A 84 ? ASP A 2066 . ? 1_555 ? 5 AC1 13 GLY A 85 ? GLY A 2067 . ? 1_555 ? 6 AC1 13 ARG A 86 ? ARG A 2068 . ? 1_555 ? 7 AC1 13 THR A 87 ? THR A 2069 . ? 1_555 ? 8 AC1 13 PRO A 88 ? PRO A 2070 . ? 1_555 ? 9 AC1 13 SER A 90 ? SER A 2072 . ? 1_555 ? 10 AC1 13 ARG A 91 ? ARG A 2073 . ? 1_555 ? 11 AC1 13 ASN A 92 ? ASN A 2074 . ? 1_555 ? 12 AC1 13 LEU A 93 ? LEU A 2075 . ? 1_555 ? 13 AC1 13 ASN A 95 ? ASN A 2077 . ? 1_555 ? # _database_PDB_matrix.entry_id 3B6L _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 3B6L _atom_sites.fract_transf_matrix[1][1] 0.012887 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012887 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.026619 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1983 ? ? ? A . n A 1 2 ARG 2 1984 ? ? ? A . n A 1 3 SER 3 1985 ? ? ? A . n A 1 4 LEU 4 1986 ? ? ? A . n A 1 5 LEU 5 1987 ? ? ? A . n A 1 6 ILE 6 1988 ? ? ? A . n A 1 7 LEU 7 1989 ? ? ? A . n A 1 8 VAL 8 1990 ? ? ? A . n A 1 9 LEU 9 1991 ? ? ? A . n A 1 10 CYS 10 1992 ? ? ? A . n A 1 11 PHE 11 1993 ? ? ? A . n A 1 12 LEU 12 1994 ? ? ? A . n A 1 13 PRO 13 1995 ? ? ? A . n A 1 14 LEU 14 1996 ? ? ? A . n A 1 15 ALA 15 1997 ? ? ? A . n A 1 16 ALA 16 1998 ? ? ? A . n A 1 17 LEU 17 1999 ? ? ? A . n A 1 18 GLY 18 2000 ? ? ? A . n A 1 19 LYS 19 2001 2001 LYS LYS A . n A 1 20 VAL 20 2002 2002 VAL VAL A . n A 1 21 PHE 21 2003 2003 PHE PHE A . n A 1 22 GLY 22 2004 2004 GLY GLY A . n A 1 23 ARG 23 2005 2005 ARG ARG A . n A 1 24 CYS 24 2006 2006 CYS CYS A . n A 1 25 GLU 25 2007 2007 GLU GLU A . n A 1 26 LEU 26 2008 2008 LEU LEU A . n A 1 27 ALA 27 2009 2009 ALA ALA A . n A 1 28 ALA 28 2010 2010 ALA ALA A . n A 1 29 ALA 29 2011 2011 ALA ALA A . n A 1 30 MET 30 2012 2012 MET MET A . n A 1 31 LYS 31 2013 2013 LYS LYS A . n A 1 32 ARG 32 2014 2014 ARG ARG A . n A 1 33 HIS 33 2015 2015 HIS HIS A . n A 1 34 GLY 34 2016 2016 GLY GLY A . n A 1 35 LEU 35 2017 2017 LEU LEU A . n A 1 36 ASP 36 2018 2018 ASP ASP A . n A 1 37 ASN 37 2019 2019 ASN ASN A . n A 1 38 TYR 38 2020 2020 TYR TYR A . n A 1 39 ARG 39 2021 2021 ARG ARG A . n A 1 40 GLY 40 2022 2022 GLY GLY A . n A 1 41 TYR 41 2023 2023 TYR TYR A . n A 1 42 SER 42 2024 2024 SER SER A . n A 1 43 LEU 43 2025 2025 LEU LEU A . n A 1 44 GLY 44 2026 2026 GLY GLY A . n A 1 45 ASN 45 2027 2027 ASN ASN A . n A 1 46 TRP 46 2028 2028 TRP TRP A . n A 1 47 VAL 47 2029 2029 VAL VAL A . n A 1 48 CYS 48 2030 2030 CYS CYS A . n A 1 49 ALA 49 2031 2031 ALA ALA A . n A 1 50 ALA 50 2032 2032 ALA ALA A . n A 1 51 LYS 51 2033 2033 LYS LYS A . n A 1 52 PHE 52 2034 2034 PHE PHE A . n A 1 53 GLU 53 2035 2035 GLU GLU A . n A 1 54 SER 54 2036 2036 SER SER A . n A 1 55 ASN 55 2037 2037 ASN ASN A . n A 1 56 PHE 56 2038 2038 PHE PHE A . n A 1 57 ASN 57 2039 2039 ASN ASN A . n A 1 58 THR 58 2040 2040 THR THR A . n A 1 59 GLN 59 2041 2041 GLN GLN A . n A 1 60 ALA 60 2042 2042 ALA ALA A . n A 1 61 THR 61 2043 2043 THR THR A . n A 1 62 ASN 62 2044 2044 ASN ASN A . n A 1 63 ARG 63 2045 2045 ARG ARG A . n A 1 64 ASN 64 2046 2046 ASN ASN A . n A 1 65 THR 65 2047 2047 THR THR A . n A 1 66 ASP 66 2048 2048 ASP ASP A . n A 1 67 GLY 67 2049 2049 GLY GLY A . n A 1 68 SER 68 2050 2050 SER SER A . n A 1 69 THR 69 2051 2051 THR THR A . n A 1 70 ASP 70 2052 2052 ASP ASP A . n A 1 71 TYR 71 2053 2053 TYR TYR A . n A 1 72 GLY 72 2054 2054 GLY GLY A . n A 1 73 ILE 73 2055 2055 ILE ILE A . n A 1 74 LEU 74 2056 2056 LEU LEU A . n A 1 75 GLN 75 2057 2057 GLN GLN A . n A 1 76 ILE 76 2058 2058 ILE ILE A . n A 1 77 ASN 77 2059 2059 ASN ASN A . n A 1 78 SER 78 2060 2060 SER SER A . n A 1 79 ARG 79 2061 2061 ARG ARG A . n A 1 80 TRP 80 2062 2062 TRP TRP A . n A 1 81 TRP 81 2063 2063 TRP TRP A . n A 1 82 CYS 82 2064 2064 CYS CYS A . n A 1 83 ASN 83 2065 2065 ASN ASN A . n A 1 84 ASP 84 2066 2066 ASP ASP A . n A 1 85 GLY 85 2067 2067 GLY GLY A . n A 1 86 ARG 86 2068 2068 ARG ARG A . n A 1 87 THR 87 2069 2069 THR THR A . n A 1 88 PRO 88 2070 2070 PRO PRO A . n A 1 89 GLY 89 2071 2071 GLY GLY A . n A 1 90 SER 90 2072 2072 SER SER A . n A 1 91 ARG 91 2073 2073 ARG ARG A . n A 1 92 ASN 92 2074 2074 ASN ASN A . n A 1 93 LEU 93 2075 2075 LEU LEU A . n A 1 94 CYS 94 2076 2076 CYS CYS A . n A 1 95 ASN 95 2077 2077 ASN ASN A . n A 1 96 ILE 96 2078 2078 ILE ILE A . n A 1 97 PRO 97 2079 2079 PRO PRO A . n A 1 98 CYS 98 2080 2080 CYS CYS A . n A 1 99 SER 99 2081 2081 SER SER A . n A 1 100 ALA 100 2082 2082 ALA ALA A . n A 1 101 LEU 101 2083 2083 LEU LEU A . n A 1 102 LEU 102 2084 2084 LEU LEU A . n A 1 103 SER 103 2085 2085 SER SER A . n A 1 104 SER 104 2086 2086 SER SER A . n A 1 105 ASP 105 2087 2087 ASP ASP A . n A 1 106 ILE 106 2088 2088 ILE ILE A . n A 1 107 THR 107 2089 2089 THR THR A . n A 1 108 ALA 108 2090 2090 ALA ALA A . n A 1 109 SER 109 2091 2091 SER SER A . n A 1 110 VAL 110 2092 2092 VAL VAL A . n A 1 111 ASN 111 2093 2093 ASN ASN A . n A 1 112 CYS 112 2094 2094 CYS CYS A . n A 1 113 ALA 113 2095 2095 ALA ALA A . n A 1 114 LYS 114 2096 2096 LYS LYS A . n A 1 115 LYS 115 2097 2097 LYS LYS A . n A 1 116 ILE 116 2098 2098 ILE ILE A . n A 1 117 VAL 117 2099 2099 VAL VAL A . n A 1 118 SER 118 2100 2100 SER SER A . n A 1 119 ASP 119 2101 2101 ASP ASP A . n A 1 120 GLY 120 2102 2102 GLY GLY A . n A 1 121 ASN 121 2103 2103 ASN ASN A . n A 1 122 GLY 122 2104 2104 GLY GLY A . n A 1 123 MET 123 2105 2105 MET MET A . n A 1 124 ASN 124 2106 2106 ASN ASN A . n A 1 125 ALA 125 2107 2107 ALA ALA A . n A 1 126 TRP 126 2108 2108 TRP TRP A . n A 1 127 VAL 127 2109 2109 VAL VAL A . n A 1 128 ALA 128 2110 2110 ALA ALA A . n A 1 129 TRP 129 2111 2111 TRP TRP A . n A 1 130 ARG 130 2112 2112 ARG ARG A . n A 1 131 ASN 131 2113 2113 ASN ASN A . n A 1 132 ARG 132 2114 2114 ARG ARG A . n A 1 133 CYS 133 2115 2115 CYS CYS A . n A 1 134 LYS 134 2116 2116 LYS LYS A . n A 1 135 GLY 135 2117 2117 GLY GLY A . n A 1 136 THR 136 2118 2118 THR THR A . n A 1 137 ASP 137 2119 2119 ASP ASP A . n A 1 138 VAL 138 2120 2120 VAL VAL A . n A 1 139 GLN 139 2121 2121 GLN GLN A . n A 1 140 ALA 140 2122 2122 ALA ALA A . n A 1 141 TRP 141 2123 2123 TRP TRP A . n A 1 142 ILE 142 2124 2124 ILE ILE A . n A 1 143 ARG 143 2125 2125 ARG ARG A . n A 1 144 GLY 144 2126 2126 GLY GLY A . n A 1 145 CYS 145 2127 2127 CYS CYS A . n A 1 146 ARG 146 2128 2128 ARG ARG A . n A 1 147 LEU 147 2129 2129 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SDS 1 2300 2300 SDS SDS A . C 3 HOH 1 4001 4001 HOH HOH A . C 3 HOH 2 4002 4002 HOH HOH A . C 3 HOH 3 4003 4003 HOH HOH A . C 3 HOH 4 4004 4004 HOH HOH A . C 3 HOH 5 4005 4005 HOH HOH A . C 3 HOH 6 4006 4006 HOH HOH A . C 3 HOH 7 4007 4007 HOH HOH A . C 3 HOH 8 4008 4008 HOH HOH A . C 3 HOH 9 4009 4009 HOH HOH A . C 3 HOH 10 4010 4010 HOH HOH A . C 3 HOH 11 4011 4011 HOH HOH A . C 3 HOH 12 4012 4012 HOH HOH A . C 3 HOH 13 4013 4013 HOH HOH A . C 3 HOH 14 4014 4014 HOH HOH A . C 3 HOH 15 4015 4015 HOH HOH A . C 3 HOH 16 4016 4016 HOH HOH A . C 3 HOH 17 4017 4017 HOH HOH A . C 3 HOH 18 4018 4018 HOH HOH A . C 3 HOH 19 4019 4019 HOH HOH A . C 3 HOH 20 4020 4020 HOH HOH A . C 3 HOH 21 4021 4021 HOH HOH A . C 3 HOH 22 4022 4022 HOH HOH A . C 3 HOH 23 4023 4023 HOH HOH A . C 3 HOH 24 4024 4024 HOH HOH A . C 3 HOH 25 4025 4025 HOH HOH A . C 3 HOH 26 4026 4026 HOH HOH A . C 3 HOH 27 4027 4027 HOH HOH A . C 3 HOH 28 4028 4028 HOH HOH A . C 3 HOH 29 4029 4029 HOH HOH A . C 3 HOH 30 4030 4030 HOH HOH A . C 3 HOH 31 4032 4032 HOH HOH A . C 3 HOH 32 4034 4034 HOH HOH A . C 3 HOH 33 4035 4035 HOH HOH A . C 3 HOH 34 4036 4036 HOH HOH A . C 3 HOH 35 4037 4037 HOH HOH A . C 3 HOH 36 4038 4038 HOH HOH A . C 3 HOH 37 4039 4039 HOH HOH A . C 3 HOH 38 4040 4040 HOH HOH A . C 3 HOH 39 4041 4041 HOH HOH A . C 3 HOH 40 4042 4042 HOH HOH A . C 3 HOH 41 4043 4043 HOH HOH A . C 3 HOH 42 4044 4044 HOH HOH A . C 3 HOH 43 4045 4045 HOH HOH A . C 3 HOH 44 4046 4046 HOH HOH A . C 3 HOH 45 4047 4047 HOH HOH A . C 3 HOH 46 4048 4048 HOH HOH A . C 3 HOH 47 4050 4050 HOH HOH A . C 3 HOH 48 4051 4051 HOH HOH A . C 3 HOH 49 4052 4052 HOH HOH A . C 3 HOH 50 4053 4053 HOH HOH A . C 3 HOH 51 4054 4054 HOH HOH A . C 3 HOH 52 4055 4055 HOH HOH A . C 3 HOH 53 4057 4057 HOH HOH A . C 3 HOH 54 4058 4058 HOH HOH A . C 3 HOH 55 4059 4059 HOH HOH A . C 3 HOH 56 4060 4060 HOH HOH A . C 3 HOH 57 4061 4061 HOH HOH A . C 3 HOH 58 4062 4062 HOH HOH A . C 3 HOH 59 4063 4063 HOH HOH A . C 3 HOH 60 4064 4064 HOH HOH A . C 3 HOH 61 4065 4065 HOH HOH A . C 3 HOH 62 4066 4066 HOH HOH A . C 3 HOH 63 4068 4068 HOH HOH A . C 3 HOH 64 4069 4069 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-07-01 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2019-07-24 4 'Structure model' 1 3 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' Advisory 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Derived calculations' 9 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_unobs_or_zero_occ_atoms 2 3 'Structure model' software 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' database_2 6 4 'Structure model' pdbx_initial_refinement_model 7 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 8 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 3 'Structure model' '_software.version' 4 4 'Structure model' '_database_2.pdbx_DOI' 5 4 'Structure model' '_database_2.pdbx_database_accession' 6 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 7 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 8 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 SHELXL-97 refinement . ? 2 'PROTEUM PLUS' 'data reduction' PLUS ? 3 'PROTEUM PLUS' 'data scaling' PLUS ? 4 SHELX phasing . ? 5 SHELX 'model building' . ? 6 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 CG _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLN _pdbx_validate_close_contact.auth_seq_id_1 2121 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 4041 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.04 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CD A ARG 2014 ? ? NE A ARG 2014 ? ? CZ A ARG 2014 ? ? 132.95 123.60 9.35 1.40 N 2 1 NE A ARG 2014 ? ? CZ A ARG 2014 ? ? NH1 A ARG 2014 ? ? 123.45 120.30 3.15 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 2038 ? ? 87.65 15.44 2 1 TRP A 2062 ? ? -136.73 -39.57 3 1 ARG A 2068 ? ? -140.03 14.79 4 1 THR A 2069 ? ? -113.37 78.06 5 1 ALA A 2122 ? ? 165.33 -32.93 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A GLN 2121 ? CG ? A GLN 139 CG 2 1 Y 0 A GLN 2121 ? CD ? A GLN 139 CD 3 1 Y 0 A GLN 2121 ? OE1 ? A GLN 139 OE1 4 1 Y 0 A GLN 2121 ? NE2 ? A GLN 139 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1983 ? A MET 1 2 1 Y 1 A ARG 1984 ? A ARG 2 3 1 Y 1 A SER 1985 ? A SER 3 4 1 Y 1 A LEU 1986 ? A LEU 4 5 1 Y 1 A LEU 1987 ? A LEU 5 6 1 Y 1 A ILE 1988 ? A ILE 6 7 1 Y 1 A LEU 1989 ? A LEU 7 8 1 Y 1 A VAL 1990 ? A VAL 8 9 1 Y 1 A LEU 1991 ? A LEU 9 10 1 Y 1 A CYS 1992 ? A CYS 10 11 1 Y 1 A PHE 1993 ? A PHE 11 12 1 Y 1 A LEU 1994 ? A LEU 12 13 1 Y 1 A PRO 1995 ? A PRO 13 14 1 Y 1 A LEU 1996 ? A LEU 14 15 1 Y 1 A ALA 1997 ? A ALA 15 16 1 Y 1 A ALA 1998 ? A ALA 16 17 1 Y 1 A LEU 1999 ? A LEU 17 18 1 Y 1 A GLY 2000 ? A GLY 18 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SDS S S N N 290 SDS O1S O N N 291 SDS O2S O N N 292 SDS O3S O N N 293 SDS O4 O N N 294 SDS C1 C N N 295 SDS C2 C N N 296 SDS C3 C N N 297 SDS C4 C N N 298 SDS C5 C N N 299 SDS C6 C N N 300 SDS C7 C N N 301 SDS C8 C N N 302 SDS C9 C N N 303 SDS C10 C N N 304 SDS C11 C N N 305 SDS C12 C N N 306 SDS H3S H N N 307 SDS H1C1 H N N 308 SDS H1C2 H N N 309 SDS H2C1 H N N 310 SDS H2C2 H N N 311 SDS H2C3 H N N 312 SDS H3C1 H N N 313 SDS H3C2 H N N 314 SDS H4C1 H N N 315 SDS H4C2 H N N 316 SDS H5C1 H N N 317 SDS H5C2 H N N 318 SDS H6C1 H N N 319 SDS H6C2 H N N 320 SDS H7C1 H N N 321 SDS H7C2 H N N 322 SDS H8C1 H N N 323 SDS H8C2 H N N 324 SDS H9C1 H N N 325 SDS H9C2 H N N 326 SDS H101 H N N 327 SDS H102 H N N 328 SDS H111 H N N 329 SDS H112 H N N 330 SDS H121 H N N 331 SDS H122 H N N 332 SER N N N N 333 SER CA C N S 334 SER C C N N 335 SER O O N N 336 SER CB C N N 337 SER OG O N N 338 SER OXT O N N 339 SER H H N N 340 SER H2 H N N 341 SER HA H N N 342 SER HB2 H N N 343 SER HB3 H N N 344 SER HG H N N 345 SER HXT H N N 346 THR N N N N 347 THR CA C N S 348 THR C C N N 349 THR O O N N 350 THR CB C N R 351 THR OG1 O N N 352 THR CG2 C N N 353 THR OXT O N N 354 THR H H N N 355 THR H2 H N N 356 THR HA H N N 357 THR HB H N N 358 THR HG1 H N N 359 THR HG21 H N N 360 THR HG22 H N N 361 THR HG23 H N N 362 THR HXT H N N 363 TRP N N N N 364 TRP CA C N S 365 TRP C C N N 366 TRP O O N N 367 TRP CB C N N 368 TRP CG C Y N 369 TRP CD1 C Y N 370 TRP CD2 C Y N 371 TRP NE1 N Y N 372 TRP CE2 C Y N 373 TRP CE3 C Y N 374 TRP CZ2 C Y N 375 TRP CZ3 C Y N 376 TRP CH2 C Y N 377 TRP OXT O N N 378 TRP H H N N 379 TRP H2 H N N 380 TRP HA H N N 381 TRP HB2 H N N 382 TRP HB3 H N N 383 TRP HD1 H N N 384 TRP HE1 H N N 385 TRP HE3 H N N 386 TRP HZ2 H N N 387 TRP HZ3 H N N 388 TRP HH2 H N N 389 TRP HXT H N N 390 TYR N N N N 391 TYR CA C N S 392 TYR C C N N 393 TYR O O N N 394 TYR CB C N N 395 TYR CG C Y N 396 TYR CD1 C Y N 397 TYR CD2 C Y N 398 TYR CE1 C Y N 399 TYR CE2 C Y N 400 TYR CZ C Y N 401 TYR OH O N N 402 TYR OXT O N N 403 TYR H H N N 404 TYR H2 H N N 405 TYR HA H N N 406 TYR HB2 H N N 407 TYR HB3 H N N 408 TYR HD1 H N N 409 TYR HD2 H N N 410 TYR HE1 H N N 411 TYR HE2 H N N 412 TYR HH H N N 413 TYR HXT H N N 414 VAL N N N N 415 VAL CA C N S 416 VAL C C N N 417 VAL O O N N 418 VAL CB C N N 419 VAL CG1 C N N 420 VAL CG2 C N N 421 VAL OXT O N N 422 VAL H H N N 423 VAL H2 H N N 424 VAL HA H N N 425 VAL HB H N N 426 VAL HG11 H N N 427 VAL HG12 H N N 428 VAL HG13 H N N 429 VAL HG21 H N N 430 VAL HG22 H N N 431 VAL HG23 H N N 432 VAL HXT H N N 433 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SDS S O1S doub N N 277 SDS S O2S sing N N 278 SDS S O3S sing N N 279 SDS S O4 doub N N 280 SDS O2S C1 sing N N 281 SDS O3S H3S sing N N 282 SDS C1 C12 sing N N 283 SDS C1 H1C1 sing N N 284 SDS C1 H1C2 sing N N 285 SDS C2 C3 sing N N 286 SDS C2 H2C1 sing N N 287 SDS C2 H2C2 sing N N 288 SDS C2 H2C3 sing N N 289 SDS C3 C4 sing N N 290 SDS C3 H3C1 sing N N 291 SDS C3 H3C2 sing N N 292 SDS C4 C5 sing N N 293 SDS C4 H4C1 sing N N 294 SDS C4 H4C2 sing N N 295 SDS C5 C6 sing N N 296 SDS C5 H5C1 sing N N 297 SDS C5 H5C2 sing N N 298 SDS C6 C7 sing N N 299 SDS C6 H6C1 sing N N 300 SDS C6 H6C2 sing N N 301 SDS C7 C8 sing N N 302 SDS C7 H7C1 sing N N 303 SDS C7 H7C2 sing N N 304 SDS C8 C9 sing N N 305 SDS C8 H8C1 sing N N 306 SDS C8 H8C2 sing N N 307 SDS C9 C10 sing N N 308 SDS C9 H9C1 sing N N 309 SDS C9 H9C2 sing N N 310 SDS C10 C11 sing N N 311 SDS C10 H101 sing N N 312 SDS C10 H102 sing N N 313 SDS C11 C12 sing N N 314 SDS C11 H111 sing N N 315 SDS C11 H112 sing N N 316 SDS C12 H121 sing N N 317 SDS C12 H122 sing N N 318 SER N CA sing N N 319 SER N H sing N N 320 SER N H2 sing N N 321 SER CA C sing N N 322 SER CA CB sing N N 323 SER CA HA sing N N 324 SER C O doub N N 325 SER C OXT sing N N 326 SER CB OG sing N N 327 SER CB HB2 sing N N 328 SER CB HB3 sing N N 329 SER OG HG sing N N 330 SER OXT HXT sing N N 331 THR N CA sing N N 332 THR N H sing N N 333 THR N H2 sing N N 334 THR CA C sing N N 335 THR CA CB sing N N 336 THR CA HA sing N N 337 THR C O doub N N 338 THR C OXT sing N N 339 THR CB OG1 sing N N 340 THR CB CG2 sing N N 341 THR CB HB sing N N 342 THR OG1 HG1 sing N N 343 THR CG2 HG21 sing N N 344 THR CG2 HG22 sing N N 345 THR CG2 HG23 sing N N 346 THR OXT HXT sing N N 347 TRP N CA sing N N 348 TRP N H sing N N 349 TRP N H2 sing N N 350 TRP CA C sing N N 351 TRP CA CB sing N N 352 TRP CA HA sing N N 353 TRP C O doub N N 354 TRP C OXT sing N N 355 TRP CB CG sing N N 356 TRP CB HB2 sing N N 357 TRP CB HB3 sing N N 358 TRP CG CD1 doub Y N 359 TRP CG CD2 sing Y N 360 TRP CD1 NE1 sing Y N 361 TRP CD1 HD1 sing N N 362 TRP CD2 CE2 doub Y N 363 TRP CD2 CE3 sing Y N 364 TRP NE1 CE2 sing Y N 365 TRP NE1 HE1 sing N N 366 TRP CE2 CZ2 sing Y N 367 TRP CE3 CZ3 doub Y N 368 TRP CE3 HE3 sing N N 369 TRP CZ2 CH2 doub Y N 370 TRP CZ2 HZ2 sing N N 371 TRP CZ3 CH2 sing Y N 372 TRP CZ3 HZ3 sing N N 373 TRP CH2 HH2 sing N N 374 TRP OXT HXT sing N N 375 TYR N CA sing N N 376 TYR N H sing N N 377 TYR N H2 sing N N 378 TYR CA C sing N N 379 TYR CA CB sing N N 380 TYR CA HA sing N N 381 TYR C O doub N N 382 TYR C OXT sing N N 383 TYR CB CG sing N N 384 TYR CB HB2 sing N N 385 TYR CB HB3 sing N N 386 TYR CG CD1 doub Y N 387 TYR CG CD2 sing Y N 388 TYR CD1 CE1 sing Y N 389 TYR CD1 HD1 sing N N 390 TYR CD2 CE2 doub Y N 391 TYR CD2 HD2 sing N N 392 TYR CE1 CZ doub Y N 393 TYR CE1 HE1 sing N N 394 TYR CE2 CZ sing Y N 395 TYR CE2 HE2 sing N N 396 TYR CZ OH sing N N 397 TYR OH HH sing N N 398 TYR OXT HXT sing N N 399 VAL N CA sing N N 400 VAL N H sing N N 401 VAL N H2 sing N N 402 VAL CA C sing N N 403 VAL CA CB sing N N 404 VAL CA HA sing N N 405 VAL C O doub N N 406 VAL C OXT sing N N 407 VAL CB CG1 sing N N 408 VAL CB CG2 sing N N 409 VAL CB HB sing N N 410 VAL CG1 HG11 sing N N 411 VAL CG1 HG12 sing N N 412 VAL CG1 HG13 sing N N 413 VAL CG2 HG21 sing N N 414 VAL CG2 HG22 sing N N 415 VAL CG2 HG23 sing N N 416 VAL OXT HXT sing N N 417 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'DODECYL SULFATE' SDS 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1Z55 _pdbx_initial_refinement_model.details ? #