data_3B7C # _entry.id 3B7C # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3B7C pdb_00003b7c 10.2210/pdb3b7c/pdb RCSB RCSB045169 ? ? WWPDB D_1000045169 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 378232 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3B7C _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-10-30 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of NTF-2 like protein of unknown function (NP_715767.1) from Shewanella oneidensis at 1.70 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3B7C _cell.length_a 66.190 _cell.length_b 66.190 _cell.length_c 126.070 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3B7C _symmetry.Int_Tables_number 179 _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uncharacterized protein' 14478.497 1 ? ? ? ? 2 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 6 ? ? ? ? 4 water nat water 18.015 162 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)PTDDIVQLLKGQEEAWNRGDLDAY(MSE)QGYWQNEQL(MSE)LISNGKFRNGWDETLAAYKKNYPDKESLGEL KFTIKEIK(MSE)LSNYAA(MSE)VVGRWDLKRLKDTPTGVFTLLVEKIDDRWVIT(MSE)DHSSD ; _entity_poly.pdbx_seq_one_letter_code_can ;GMPTDDIVQLLKGQEEAWNRGDLDAYMQGYWQNEQLMLISNGKFRNGWDETLAAYKKNYPDKESLGELKFTIKEIKMLSN YAAMVVGRWDLKRLKDTPTGVFTLLVEKIDDRWVITMDHSSD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 378232 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 PRO n 1 4 THR n 1 5 ASP n 1 6 ASP n 1 7 ILE n 1 8 VAL n 1 9 GLN n 1 10 LEU n 1 11 LEU n 1 12 LYS n 1 13 GLY n 1 14 GLN n 1 15 GLU n 1 16 GLU n 1 17 ALA n 1 18 TRP n 1 19 ASN n 1 20 ARG n 1 21 GLY n 1 22 ASP n 1 23 LEU n 1 24 ASP n 1 25 ALA n 1 26 TYR n 1 27 MSE n 1 28 GLN n 1 29 GLY n 1 30 TYR n 1 31 TRP n 1 32 GLN n 1 33 ASN n 1 34 GLU n 1 35 GLN n 1 36 LEU n 1 37 MSE n 1 38 LEU n 1 39 ILE n 1 40 SER n 1 41 ASN n 1 42 GLY n 1 43 LYS n 1 44 PHE n 1 45 ARG n 1 46 ASN n 1 47 GLY n 1 48 TRP n 1 49 ASP n 1 50 GLU n 1 51 THR n 1 52 LEU n 1 53 ALA n 1 54 ALA n 1 55 TYR n 1 56 LYS n 1 57 LYS n 1 58 ASN n 1 59 TYR n 1 60 PRO n 1 61 ASP n 1 62 LYS n 1 63 GLU n 1 64 SER n 1 65 LEU n 1 66 GLY n 1 67 GLU n 1 68 LEU n 1 69 LYS n 1 70 PHE n 1 71 THR n 1 72 ILE n 1 73 LYS n 1 74 GLU n 1 75 ILE n 1 76 LYS n 1 77 MSE n 1 78 LEU n 1 79 SER n 1 80 ASN n 1 81 TYR n 1 82 ALA n 1 83 ALA n 1 84 MSE n 1 85 VAL n 1 86 VAL n 1 87 GLY n 1 88 ARG n 1 89 TRP n 1 90 ASP n 1 91 LEU n 1 92 LYS n 1 93 ARG n 1 94 LEU n 1 95 LYS n 1 96 ASP n 1 97 THR n 1 98 PRO n 1 99 THR n 1 100 GLY n 1 101 VAL n 1 102 PHE n 1 103 THR n 1 104 LEU n 1 105 LEU n 1 106 VAL n 1 107 GLU n 1 108 LYS n 1 109 ILE n 1 110 ASP n 1 111 ASP n 1 112 ARG n 1 113 TRP n 1 114 VAL n 1 115 ILE n 1 116 THR n 1 117 MSE n 1 118 ASP n 1 119 HIS n 1 120 SER n 1 121 SER n 1 122 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Shewanella _entity_src_gen.pdbx_gene_src_gene 'NP_715767.1, SO_0125' _entity_src_gen.gene_src_species 'Shewanella oneidensis' _entity_src_gen.gene_src_strain MR-1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Shewanella oneidensis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 211586 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name speedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8EKG8_SHEON _struct_ref.pdbx_db_accession Q8EKG8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MPTDDIVQLLKGQEEAWNRGDLDAYMQGYWQNEQLMLISNGKFRNGWDETLAAYKKNYPDKESLGELKFTIKEIKMLSNY AAMVVGRWDLKRLKDTPTGVFTLLVEKIDDRWVITMDHSSD ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3B7C _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 122 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8EKG8 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 121 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 121 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3B7C _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q8EKG8 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3B7C # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.75 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 55.32 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details 'NANODROP, 0.2M CaCl2, 20.0% Isopropanol, 0.1M Acetate pH 4.6, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.details ? _diffrn_detector.pdbx_collection_date 2007-10-04 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9537 1.0 2 0.9797 1.0 3 0.9795 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline 8.2.2 _diffrn_source.type 'ALS BEAMLINE 8.2.2' _diffrn_source.pdbx_wavelength_list '0.9537, 0.9797, 0.9795' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ALS # _reflns.entry_id 3B7C _reflns.d_resolution_high 1.70 _reflns.d_resolution_low 29.298 _reflns.number_obs 18701 _reflns.pdbx_Rmerge_I_obs 0.060 _reflns.pdbx_netI_over_sigmaI 19.590 _reflns.percent_possible_obs 99.500 _reflns.B_iso_Wilson_estimate 18.49 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.70 1.76 16372 ? 3249 0.561 2.8 ? ? ? ? ? 97.10 1 1 1.76 1.83 19135 ? 3397 0.436 3.9 ? ? ? ? ? 100.00 2 1 1.83 1.91 18635 ? 3294 0.321 5.2 ? ? ? ? ? 100.00 3 1 1.91 2.02 20988 ? 3702 0.203 8.1 ? ? ? ? ? 100.00 4 1 2.02 2.14 18382 ? 3237 0.136 12.0 ? ? ? ? ? 100.00 5 1 2.14 2.31 19785 ? 3481 0.100 15.9 ? ? ? ? ? 99.90 6 1 2.31 2.54 19302 ? 3393 0.077 19.7 ? ? ? ? ? 100.00 7 1 2.54 2.90 18821 ? 3332 0.050 28.9 ? ? ? ? ? 100.00 8 1 2.90 3.66 19193 ? 3457 0.031 44.3 ? ? ? ? ? 99.80 9 1 3.66 29.298 18413 ? 3369 0.024 54.7 ? ? ? ? ? 98.10 10 1 # _refine.entry_id 3B7C _refine.ls_d_res_high 1.700 _refine.ls_d_res_low 29.298 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.920 _refine.ls_number_reflns_obs 18638 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. CHLORIDE ION FROM THE CRYSTALLIZATION CONDITIONS AND ETHYLENE GLYCOL FROM THE CRYO CONDITIONS ARE MODELED IN THE STRUCTURE. 5. THE UNEXPLAINED ELECTRON DENSITY AROUND RESIDUE 44 WAS NOT MODELED. ; _refine.ls_R_factor_obs 0.186 _refine.ls_R_factor_R_work 0.184 _refine.ls_R_factor_R_free 0.214 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 953 _refine.B_iso_mean 14.308 _refine.aniso_B[1][1] 0.360 _refine.aniso_B[2][2] 0.360 _refine.aniso_B[3][3] -0.540 _refine.aniso_B[1][2] 0.180 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.956 _refine.correlation_coeff_Fo_to_Fc_free 0.943 _refine.pdbx_overall_ESU_R 0.102 _refine.pdbx_overall_ESU_R_Free 0.100 _refine.overall_SU_ML 0.066 _refine.overall_SU_B 3.906 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 975 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 25 _refine_hist.number_atoms_solvent 162 _refine_hist.number_atoms_total 1162 _refine_hist.d_res_high 1.700 _refine_hist.d_res_low 29.298 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1143 0.018 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 785 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1550 1.635 1.960 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 1917 0.884 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 145 6.298 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 54 39.502 25.185 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 208 14.140 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 6 9.549 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 163 0.096 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1305 0.008 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 228 0.003 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 219 0.218 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 850 0.200 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 523 0.179 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 638 0.088 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 124 0.214 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 23 0.172 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 42 0.295 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 20 0.189 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 742 2.380 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 274 0.615 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1110 2.790 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 528 5.785 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 440 7.620 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.70 _refine_ls_shell.d_res_low 1.75 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.780 _refine_ls_shell.number_reflns_R_work 1265 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.232 _refine_ls_shell.R_factor_R_free 0.245 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 73 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1338 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3B7C _struct.title 'CRYSTAL STRUCTURE OF A NTF-2 LIKE PROTEIN OF UNKNOWN FUNCTION (SO_0125) FROM SHEWANELLA ONEIDENSIS MR-1 AT 1.70 A RESOLUTION' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;NTF-2 LIKE PROTEIN, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, UNKNOWN FUNCTION ; _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.entry_id 3B7C # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 MSE A 2 ? ARG A 20 ? MSE A 1 ARG A 19 1 ? 19 HELX_P HELX_P2 2 ASP A 22 ? GLN A 28 ? ASP A 21 GLN A 27 1 ? 7 HELX_P HELX_P3 3 GLY A 47 ? TYR A 59 ? GLY A 46 TYR A 58 1 ? 13 HELX_P HELX_P4 4 ASP A 61 ? LEU A 65 ? ASP A 60 LEU A 64 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 2 C ? ? ? 1_555 A PRO 3 N ? ? A MSE 1 A PRO 2 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale2 covale both ? A TYR 26 C ? ? ? 1_555 A MSE 27 N ? ? A TYR 25 A MSE 26 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale3 covale both ? A MSE 27 C ? ? ? 1_555 A GLN 28 N ? ? A MSE 26 A GLN 27 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale4 covale both ? A LEU 36 C ? ? ? 1_555 A MSE 37 N A ? A LEU 35 A MSE 36 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale5 covale both ? A LEU 36 C ? ? ? 1_555 A MSE 37 N B ? A LEU 35 A MSE 36 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale6 covale both ? A MSE 37 C A ? ? 1_555 A LEU 38 N A ? A MSE 36 A LEU 37 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale7 covale both ? A MSE 37 C B ? ? 1_555 A LEU 38 N B ? A MSE 36 A LEU 37 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale8 covale both ? A LYS 76 C ? ? ? 1_555 A MSE 77 N ? ? A LYS 75 A MSE 76 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale9 covale both ? A MSE 77 C ? ? ? 1_555 A LEU 78 N ? ? A MSE 76 A LEU 77 1_555 ? ? ? ? ? ? ? 1.314 ? ? covale10 covale both ? A ALA 83 C ? ? ? 1_555 A MSE 84 N A ? A ALA 82 A MSE 83 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale11 covale both ? A ALA 83 C ? ? ? 1_555 A MSE 84 N B ? A ALA 82 A MSE 83 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale12 covale both ? A MSE 84 C A ? ? 1_555 A VAL 85 N ? ? A MSE 83 A VAL 84 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale13 covale both ? A MSE 84 C B ? ? 1_555 A VAL 85 N ? ? A MSE 83 A VAL 84 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale14 covale both ? A THR 116 C ? ? ? 1_555 A MSE 117 N ? ? A THR 115 A MSE 116 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale15 covale both ? A MSE 117 C ? ? ? 1_555 A ASP 118 N ? ? A MSE 116 A ASP 117 1_555 ? ? ? ? ? ? ? 1.331 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 44 ? ASN A 46 ? PHE A 43 ASN A 45 A 2 MSE A 37 ? ILE A 39 ? MSE A 36 ILE A 38 A 3 ARG A 112 ? SER A 121 ? ARG A 111 SER A 120 A 4 THR A 99 ? ILE A 109 ? THR A 98 ILE A 108 A 5 ALA A 82 ? LYS A 92 ? ALA A 81 LYS A 91 A 6 GLU A 67 ? SER A 79 ? GLU A 66 SER A 78 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ARG A 45 ? O ARG A 44 N LEU A 38 ? N LEU A 37 A 2 3 N ILE A 39 ? N ILE A 38 O ASP A 118 ? O ASP A 117 A 3 4 O HIS A 119 ? O HIS A 118 N THR A 103 ? N THR A 102 A 4 5 O LEU A 104 ? O LEU A 103 N VAL A 85 ? N VAL A 84 A 5 6 O VAL A 86 ? O VAL A 85 N LYS A 73 ? N LYS A 72 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CL 122 ? 3 'BINDING SITE FOR RESIDUE CL A 122' AC2 Software A EDO 123 ? 8 'BINDING SITE FOR RESIDUE EDO A 123' AC3 Software A EDO 124 ? 3 'BINDING SITE FOR RESIDUE EDO A 124' AC4 Software A EDO 125 ? 8 'BINDING SITE FOR RESIDUE EDO A 125' AC5 Software A EDO 126 ? 4 'BINDING SITE FOR RESIDUE EDO A 126' AC6 Software A EDO 127 ? 7 'BINDING SITE FOR RESIDUE EDO A 127' AC7 Software A EDO 128 ? 7 'BINDING SITE FOR RESIDUE EDO A 128' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 SER A 79 ? SER A 78 . ? 1_555 ? 2 AC1 3 ASN A 80 ? ASN A 79 . ? 1_555 ? 3 AC1 3 HOH I . ? HOH A 212 . ? 1_555 ? 4 AC2 8 VAL A 8 ? VAL A 7 . ? 1_555 ? 5 AC2 8 LYS A 12 ? LYS A 11 . ? 1_555 ? 6 AC2 8 GLU A 15 ? GLU A 14 . ? 1_555 ? 7 AC2 8 LYS A 69 ? LYS A 68 . ? 1_555 ? 8 AC2 8 PHE A 70 ? PHE A 69 . ? 1_555 ? 9 AC2 8 HOH I . ? HOH A 165 . ? 1_555 ? 10 AC2 8 HOH I . ? HOH A 239 . ? 1_555 ? 11 AC2 8 HOH I . ? HOH A 255 . ? 1_555 ? 12 AC3 3 GLY A 21 ? GLY A 20 . ? 1_555 ? 13 AC3 3 TYR A 59 ? TYR A 58 . ? 1_555 ? 14 AC3 3 HOH I . ? HOH A 234 . ? 1_555 ? 15 AC4 8 PRO A 60 ? PRO A 59 . ? 8_665 ? 16 AC4 8 ASP A 61 ? ASP A 60 . ? 8_665 ? 17 AC4 8 SER A 64 ? SER A 63 . ? 8_665 ? 18 AC4 8 MSE A 77 ? MSE A 76 . ? 1_555 ? 19 AC4 8 SER A 79 ? SER A 78 . ? 1_555 ? 20 AC4 8 ASN A 80 ? ASN A 79 . ? 1_555 ? 21 AC4 8 HOH I . ? HOH A 157 . ? 1_555 ? 22 AC4 8 HOH I . ? HOH A 212 . ? 1_555 ? 23 AC5 4 GLU A 67 ? GLU A 66 . ? 1_555 ? 24 AC5 4 ASP A 90 ? ASP A 89 . ? 1_555 ? 25 AC5 4 LYS A 92 ? LYS A 91 . ? 1_555 ? 26 AC5 4 HOH I . ? HOH A 219 . ? 1_555 ? 27 AC6 7 TRP A 89 ? TRP A 88 . ? 1_555 ? 28 AC6 7 PRO A 98 ? PRO A 97 . ? 1_555 ? 29 AC6 7 THR A 99 ? THR A 98 . ? 1_555 ? 30 AC6 7 ASP A 111 ? ASP A 110 . ? 8_565 ? 31 AC6 7 ASP A 122 ? ASP A 121 . ? 1_555 ? 32 AC6 7 HOH I . ? HOH A 194 . ? 1_555 ? 33 AC6 7 HOH I . ? HOH A 223 . ? 1_555 ? 34 AC7 7 GLN A 14 ? GLN A 13 . ? 1_555 ? 35 AC7 7 TYR A 26 ? TYR A 25 . ? 1_555 ? 36 AC7 7 TYR A 30 ? TYR A 29 . ? 1_555 ? 37 AC7 7 PHE A 70 ? PHE A 69 . ? 1_555 ? 38 AC7 7 ILE A 115 ? ILE A 114 . ? 1_555 ? 39 AC7 7 ASP A 118 ? ASP A 117 . ? 1_555 ? 40 AC7 7 HOH I . ? HOH A 175 . ? 1_555 ? # _atom_sites.entry_id 3B7C _atom_sites.fract_transf_matrix[1][1] 0.015108 _atom_sites.fract_transf_matrix[1][2] 0.008723 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017445 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007932 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 PRO 3 2 2 PRO PRO A . n A 1 4 THR 4 3 3 THR THR A . n A 1 5 ASP 5 4 4 ASP ASP A . n A 1 6 ASP 6 5 5 ASP ASP A . n A 1 7 ILE 7 6 6 ILE ILE A . n A 1 8 VAL 8 7 7 VAL VAL A . n A 1 9 GLN 9 8 8 GLN GLN A . n A 1 10 LEU 10 9 9 LEU LEU A . n A 1 11 LEU 11 10 10 LEU LEU A . n A 1 12 LYS 12 11 11 LYS LYS A . n A 1 13 GLY 13 12 12 GLY GLY A . n A 1 14 GLN 14 13 13 GLN GLN A . n A 1 15 GLU 15 14 14 GLU GLU A . n A 1 16 GLU 16 15 15 GLU GLU A . n A 1 17 ALA 17 16 16 ALA ALA A . n A 1 18 TRP 18 17 17 TRP TRP A . n A 1 19 ASN 19 18 18 ASN ASN A . n A 1 20 ARG 20 19 19 ARG ARG A . n A 1 21 GLY 21 20 20 GLY GLY A . n A 1 22 ASP 22 21 21 ASP ASP A . n A 1 23 LEU 23 22 22 LEU LEU A . n A 1 24 ASP 24 23 23 ASP ASP A . n A 1 25 ALA 25 24 24 ALA ALA A . n A 1 26 TYR 26 25 25 TYR TYR A . n A 1 27 MSE 27 26 26 MSE MSE A . n A 1 28 GLN 28 27 27 GLN GLN A . n A 1 29 GLY 29 28 28 GLY GLY A . n A 1 30 TYR 30 29 29 TYR TYR A . n A 1 31 TRP 31 30 30 TRP TRP A . n A 1 32 GLN 32 31 31 GLN GLN A . n A 1 33 ASN 33 32 32 ASN ASN A . n A 1 34 GLU 34 33 33 GLU GLU A . n A 1 35 GLN 35 34 34 GLN GLN A . n A 1 36 LEU 36 35 35 LEU LEU A . n A 1 37 MSE 37 36 36 MSE MSE A . n A 1 38 LEU 38 37 37 LEU LEU A . n A 1 39 ILE 39 38 38 ILE ILE A . n A 1 40 SER 40 39 39 SER SER A . n A 1 41 ASN 41 40 40 ASN ASN A . n A 1 42 GLY 42 41 41 GLY GLY A . n A 1 43 LYS 43 42 42 LYS LYS A . n A 1 44 PHE 44 43 43 PHE PHE A . n A 1 45 ARG 45 44 44 ARG ARG A . n A 1 46 ASN 46 45 45 ASN ASN A . n A 1 47 GLY 47 46 46 GLY GLY A . n A 1 48 TRP 48 47 47 TRP TRP A . n A 1 49 ASP 49 48 48 ASP ASP A . n A 1 50 GLU 50 49 49 GLU GLU A . n A 1 51 THR 51 50 50 THR THR A . n A 1 52 LEU 52 51 51 LEU LEU A . n A 1 53 ALA 53 52 52 ALA ALA A . n A 1 54 ALA 54 53 53 ALA ALA A . n A 1 55 TYR 55 54 54 TYR TYR A . n A 1 56 LYS 56 55 55 LYS LYS A . n A 1 57 LYS 57 56 56 LYS LYS A . n A 1 58 ASN 58 57 57 ASN ASN A . n A 1 59 TYR 59 58 58 TYR TYR A . n A 1 60 PRO 60 59 59 PRO PRO A . n A 1 61 ASP 61 60 60 ASP ASP A . n A 1 62 LYS 62 61 61 LYS LYS A . n A 1 63 GLU 63 62 62 GLU GLU A . n A 1 64 SER 64 63 63 SER SER A . n A 1 65 LEU 65 64 64 LEU LEU A . n A 1 66 GLY 66 65 65 GLY GLY A . n A 1 67 GLU 67 66 66 GLU GLU A . n A 1 68 LEU 68 67 67 LEU LEU A . n A 1 69 LYS 69 68 68 LYS LYS A . n A 1 70 PHE 70 69 69 PHE PHE A . n A 1 71 THR 71 70 70 THR THR A . n A 1 72 ILE 72 71 71 ILE ILE A . n A 1 73 LYS 73 72 72 LYS LYS A . n A 1 74 GLU 74 73 73 GLU GLU A . n A 1 75 ILE 75 74 74 ILE ILE A . n A 1 76 LYS 76 75 75 LYS LYS A . n A 1 77 MSE 77 76 76 MSE MSE A . n A 1 78 LEU 78 77 77 LEU LEU A . n A 1 79 SER 79 78 78 SER SER A . n A 1 80 ASN 80 79 79 ASN ASN A . n A 1 81 TYR 81 80 80 TYR TYR A . n A 1 82 ALA 82 81 81 ALA ALA A . n A 1 83 ALA 83 82 82 ALA ALA A . n A 1 84 MSE 84 83 83 MSE MSE A . n A 1 85 VAL 85 84 84 VAL VAL A . n A 1 86 VAL 86 85 85 VAL VAL A . n A 1 87 GLY 87 86 86 GLY GLY A . n A 1 88 ARG 88 87 87 ARG ARG A . n A 1 89 TRP 89 88 88 TRP TRP A . n A 1 90 ASP 90 89 89 ASP ASP A . n A 1 91 LEU 91 90 90 LEU LEU A . n A 1 92 LYS 92 91 91 LYS LYS A . n A 1 93 ARG 93 92 92 ARG ARG A . n A 1 94 LEU 94 93 93 LEU LEU A . n A 1 95 LYS 95 94 94 LYS LYS A . n A 1 96 ASP 96 95 95 ASP ASP A . n A 1 97 THR 97 96 96 THR THR A . n A 1 98 PRO 98 97 97 PRO PRO A . n A 1 99 THR 99 98 98 THR THR A . n A 1 100 GLY 100 99 99 GLY GLY A . n A 1 101 VAL 101 100 100 VAL VAL A . n A 1 102 PHE 102 101 101 PHE PHE A . n A 1 103 THR 103 102 102 THR THR A . n A 1 104 LEU 104 103 103 LEU LEU A . n A 1 105 LEU 105 104 104 LEU LEU A . n A 1 106 VAL 106 105 105 VAL VAL A . n A 1 107 GLU 107 106 106 GLU GLU A . n A 1 108 LYS 108 107 107 LYS LYS A . n A 1 109 ILE 109 108 108 ILE ILE A . n A 1 110 ASP 110 109 109 ASP ASP A . n A 1 111 ASP 111 110 110 ASP ASP A . n A 1 112 ARG 112 111 111 ARG ARG A . n A 1 113 TRP 113 112 112 TRP TRP A . n A 1 114 VAL 114 113 113 VAL VAL A . n A 1 115 ILE 115 114 114 ILE ILE A . n A 1 116 THR 116 115 115 THR THR A . n A 1 117 MSE 117 116 116 MSE MSE A . n A 1 118 ASP 118 117 117 ASP ASP A . n A 1 119 HIS 119 118 118 HIS HIS A . n A 1 120 SER 120 119 119 SER SER A . n A 1 121 SER 121 120 120 SER SER A . n A 1 122 ASP 122 121 121 ASP ASP A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL 1 122 1 CL CL A . C 3 EDO 1 123 2 EDO EDO A . D 3 EDO 1 124 3 EDO EDO A . E 3 EDO 1 125 4 EDO EDO A . F 3 EDO 1 126 5 EDO EDO A . G 3 EDO 1 127 6 EDO EDO A . H 3 EDO 1 128 7 EDO EDO A . I 4 HOH 1 129 8 HOH HOH A . I 4 HOH 2 130 9 HOH HOH A . I 4 HOH 3 131 10 HOH HOH A . I 4 HOH 4 132 11 HOH HOH A . I 4 HOH 5 133 12 HOH HOH A . I 4 HOH 6 134 13 HOH HOH A . I 4 HOH 7 135 14 HOH HOH A . I 4 HOH 8 136 15 HOH HOH A . I 4 HOH 9 137 16 HOH HOH A . I 4 HOH 10 138 17 HOH HOH A . I 4 HOH 11 139 18 HOH HOH A . I 4 HOH 12 140 19 HOH HOH A . I 4 HOH 13 141 20 HOH HOH A . I 4 HOH 14 142 21 HOH HOH A . I 4 HOH 15 143 22 HOH HOH A . I 4 HOH 16 144 23 HOH HOH A . I 4 HOH 17 145 24 HOH HOH A . I 4 HOH 18 146 25 HOH HOH A . I 4 HOH 19 147 26 HOH HOH A . I 4 HOH 20 148 27 HOH HOH A . I 4 HOH 21 149 28 HOH HOH A . I 4 HOH 22 150 29 HOH HOH A . I 4 HOH 23 151 30 HOH HOH A . I 4 HOH 24 152 31 HOH HOH A . I 4 HOH 25 153 32 HOH HOH A . I 4 HOH 26 154 33 HOH HOH A . I 4 HOH 27 155 34 HOH HOH A . I 4 HOH 28 156 35 HOH HOH A . I 4 HOH 29 157 36 HOH HOH A . I 4 HOH 30 158 37 HOH HOH A . I 4 HOH 31 159 38 HOH HOH A . I 4 HOH 32 160 39 HOH HOH A . I 4 HOH 33 161 40 HOH HOH A . I 4 HOH 34 162 41 HOH HOH A . I 4 HOH 35 163 42 HOH HOH A . I 4 HOH 36 164 43 HOH HOH A . I 4 HOH 37 165 44 HOH HOH A . I 4 HOH 38 166 45 HOH HOH A . I 4 HOH 39 167 46 HOH HOH A . I 4 HOH 40 168 47 HOH HOH A . I 4 HOH 41 169 48 HOH HOH A . I 4 HOH 42 170 49 HOH HOH A . I 4 HOH 43 171 50 HOH HOH A . I 4 HOH 44 172 51 HOH HOH A . I 4 HOH 45 173 52 HOH HOH A . I 4 HOH 46 174 53 HOH HOH A . I 4 HOH 47 175 54 HOH HOH A . I 4 HOH 48 176 55 HOH HOH A . I 4 HOH 49 177 56 HOH HOH A . I 4 HOH 50 178 57 HOH HOH A . I 4 HOH 51 179 58 HOH HOH A . I 4 HOH 52 180 59 HOH HOH A . I 4 HOH 53 181 60 HOH HOH A . I 4 HOH 54 182 61 HOH HOH A . I 4 HOH 55 183 62 HOH HOH A . I 4 HOH 56 184 63 HOH HOH A . I 4 HOH 57 185 64 HOH HOH A . I 4 HOH 58 186 65 HOH HOH A . I 4 HOH 59 187 66 HOH HOH A . I 4 HOH 60 188 67 HOH HOH A . I 4 HOH 61 189 68 HOH HOH A . I 4 HOH 62 190 69 HOH HOH A . I 4 HOH 63 191 70 HOH HOH A . I 4 HOH 64 192 71 HOH HOH A . I 4 HOH 65 193 72 HOH HOH A . I 4 HOH 66 194 73 HOH HOH A . I 4 HOH 67 195 74 HOH HOH A . I 4 HOH 68 196 75 HOH HOH A . I 4 HOH 69 197 76 HOH HOH A . I 4 HOH 70 198 77 HOH HOH A . I 4 HOH 71 199 78 HOH HOH A . I 4 HOH 72 200 79 HOH HOH A . I 4 HOH 73 201 80 HOH HOH A . I 4 HOH 74 202 81 HOH HOH A . I 4 HOH 75 203 82 HOH HOH A . I 4 HOH 76 204 83 HOH HOH A . I 4 HOH 77 205 84 HOH HOH A . I 4 HOH 78 206 85 HOH HOH A . I 4 HOH 79 207 86 HOH HOH A . I 4 HOH 80 208 87 HOH HOH A . I 4 HOH 81 209 88 HOH HOH A . I 4 HOH 82 210 89 HOH HOH A . I 4 HOH 83 211 90 HOH HOH A . I 4 HOH 84 212 91 HOH HOH A . I 4 HOH 85 213 92 HOH HOH A . I 4 HOH 86 214 93 HOH HOH A . I 4 HOH 87 215 94 HOH HOH A . I 4 HOH 88 216 95 HOH HOH A . I 4 HOH 89 217 96 HOH HOH A . I 4 HOH 90 218 97 HOH HOH A . I 4 HOH 91 219 98 HOH HOH A . I 4 HOH 92 220 99 HOH HOH A . I 4 HOH 93 221 100 HOH HOH A . I 4 HOH 94 222 101 HOH HOH A . I 4 HOH 95 223 102 HOH HOH A . I 4 HOH 96 224 103 HOH HOH A . I 4 HOH 97 225 104 HOH HOH A . I 4 HOH 98 226 105 HOH HOH A . I 4 HOH 99 227 106 HOH HOH A . I 4 HOH 100 228 107 HOH HOH A . I 4 HOH 101 229 108 HOH HOH A . I 4 HOH 102 230 109 HOH HOH A . I 4 HOH 103 231 110 HOH HOH A . I 4 HOH 104 232 111 HOH HOH A . I 4 HOH 105 233 112 HOH HOH A . I 4 HOH 106 234 113 HOH HOH A . I 4 HOH 107 235 114 HOH HOH A . I 4 HOH 108 236 115 HOH HOH A . I 4 HOH 109 237 116 HOH HOH A . I 4 HOH 110 238 117 HOH HOH A . I 4 HOH 111 239 118 HOH HOH A . I 4 HOH 112 240 119 HOH HOH A . I 4 HOH 113 241 120 HOH HOH A . I 4 HOH 114 242 121 HOH HOH A . I 4 HOH 115 243 122 HOH HOH A . I 4 HOH 116 244 123 HOH HOH A . I 4 HOH 117 245 124 HOH HOH A . I 4 HOH 118 246 125 HOH HOH A . I 4 HOH 119 247 126 HOH HOH A . I 4 HOH 120 248 127 HOH HOH A . I 4 HOH 121 249 128 HOH HOH A . I 4 HOH 122 250 129 HOH HOH A . I 4 HOH 123 251 130 HOH HOH A . I 4 HOH 124 252 131 HOH HOH A . I 4 HOH 125 253 132 HOH HOH A . I 4 HOH 126 254 133 HOH HOH A . I 4 HOH 127 255 134 HOH HOH A . I 4 HOH 128 256 135 HOH HOH A . I 4 HOH 129 257 136 HOH HOH A . I 4 HOH 130 258 137 HOH HOH A . I 4 HOH 131 259 138 HOH HOH A . I 4 HOH 132 260 139 HOH HOH A . I 4 HOH 133 261 140 HOH HOH A . I 4 HOH 134 262 141 HOH HOH A . I 4 HOH 135 263 142 HOH HOH A . I 4 HOH 136 264 143 HOH HOH A . I 4 HOH 137 265 144 HOH HOH A . I 4 HOH 138 266 145 HOH HOH A . I 4 HOH 139 267 146 HOH HOH A . I 4 HOH 140 268 147 HOH HOH A . I 4 HOH 141 269 148 HOH HOH A . I 4 HOH 142 270 149 HOH HOH A . I 4 HOH 143 271 150 HOH HOH A . I 4 HOH 144 272 151 HOH HOH A . I 4 HOH 145 273 152 HOH HOH A . I 4 HOH 146 274 153 HOH HOH A . I 4 HOH 147 275 154 HOH HOH A . I 4 HOH 148 276 155 HOH HOH A . I 4 HOH 149 277 156 HOH HOH A . I 4 HOH 150 278 157 HOH HOH A . I 4 HOH 151 279 158 HOH HOH A . I 4 HOH 152 280 159 HOH HOH A . I 4 HOH 153 281 160 HOH HOH A . I 4 HOH 154 282 161 HOH HOH A . I 4 HOH 155 283 162 HOH HOH A . I 4 HOH 156 284 163 HOH HOH A . I 4 HOH 157 285 164 HOH HOH A . I 4 HOH 158 286 165 HOH HOH A . I 4 HOH 159 287 166 HOH HOH A . I 4 HOH 160 288 167 HOH HOH A . I 4 HOH 161 289 168 HOH HOH A . I 4 HOH 162 290 169 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 27 A MSE 26 ? MET SELENOMETHIONINE 3 A MSE 37 A MSE 36 ? MET SELENOMETHIONINE 4 A MSE 77 A MSE 76 ? MET SELENOMETHIONINE 5 A MSE 84 A MSE 83 ? MET SELENOMETHIONINE 6 A MSE 117 A MSE 116 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_assembly_prop.biol_id 1 _pdbx_struct_assembly_prop.type 'ABSA (A^2)' _pdbx_struct_assembly_prop.value 2160 _pdbx_struct_assembly_prop.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 12_564 x,x-y+1,-z-1/6 0.5000000000 0.8660254038 0.0000000000 -33.0950000000 0.8660254038 -0.5000000000 0.0000000000 57.3222214765 0.0000000000 0.0000000000 -1.0000000000 -21.0116666667 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-11-13 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Source and taxonomy' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' software 3 4 'Structure model' struct_conn 4 5 'Structure model' database_2 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -8.4327 _pdbx_refine_tls.origin_y 28.8831 _pdbx_refine_tls.origin_z 1.3111 _pdbx_refine_tls.T[1][1] -0.0453 _pdbx_refine_tls.T[2][2] 0.0273 _pdbx_refine_tls.T[3][3] -0.0258 _pdbx_refine_tls.T[1][2] 0.0017 _pdbx_refine_tls.T[1][3] -0.0062 _pdbx_refine_tls.T[2][3] 0.0251 _pdbx_refine_tls.L[1][1] 1.1943 _pdbx_refine_tls.L[2][2] 1.5679 _pdbx_refine_tls.L[3][3] 0.9847 _pdbx_refine_tls.L[1][2] 0.9562 _pdbx_refine_tls.L[1][3] -0.5350 _pdbx_refine_tls.L[2][3] -0.4634 _pdbx_refine_tls.S[1][1] -0.0716 _pdbx_refine_tls.S[2][2] -0.0627 _pdbx_refine_tls.S[3][3] 0.1342 _pdbx_refine_tls.S[1][2] -0.2068 _pdbx_refine_tls.S[1][3] -0.1080 _pdbx_refine_tls.S[2][3] -0.0761 _pdbx_refine_tls.S[2][1] -0.0250 _pdbx_refine_tls.S[3][1] 0.0154 _pdbx_refine_tls.S[3][2] 0.0701 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 2 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 122 _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 1 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 121 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/xscale_program.html ? ? 5 PDB_EXTRACT 3.000 'July 2, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 6 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 SOLVE . ? ? ? ? phasing ? ? ? 10 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ; SEQUENCE THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; # _pdbx_entry_details.entry_id 3B7C _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;REMARK 999 SEQUENCE: THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. REMARK 999 ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 39 ? ? -103.14 -161.26 2 1 SER A 39 ? ? -103.14 -162.73 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 11 ? CE ? A LYS 12 CE 2 1 Y 1 A LYS 11 ? NZ ? A LYS 12 NZ 3 1 Y 1 A LYS 42 ? CG ? A LYS 43 CG 4 1 Y 1 A LYS 42 ? CD ? A LYS 43 CD 5 1 Y 1 A LYS 42 ? CE ? A LYS 43 CE 6 1 Y 1 A LYS 42 ? NZ ? A LYS 43 NZ 7 1 Y 1 A ARG 44 ? CD ? A ARG 45 CD 8 1 Y 1 A ARG 44 ? NE ? A ARG 45 NE 9 1 Y 1 A ARG 44 ? CZ ? A ARG 45 CZ 10 1 Y 1 A ARG 44 ? NH1 ? A ARG 45 NH1 11 1 Y 1 A ARG 44 ? NH2 ? A ARG 45 NH2 12 1 Y 1 A LYS 61 ? CG ? A LYS 62 CG 13 1 Y 1 A LYS 61 ? CD ? A LYS 62 CD 14 1 Y 1 A LYS 61 ? CE ? A LYS 62 CE 15 1 Y 1 A LYS 61 ? NZ ? A LYS 62 NZ 16 1 Y 1 A LYS 91 ? CD ? A LYS 92 CD 17 1 Y 1 A LYS 91 ? CE ? A LYS 92 CE 18 1 Y 1 A LYS 91 ? NZ ? A LYS 92 NZ # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id GLY _pdbx_unobs_or_zero_occ_residues.auth_seq_id 0 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id GLY _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 1,2-ETHANEDIOL EDO 4 water HOH #