data_3B81 # _entry.id 3B81 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3B81 pdb_00003b81 10.2210/pdb3b81/pdb RCSB RCSB045194 ? ? WWPDB D_1000045194 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 379155 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3B81 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-10-31 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Crystal structure of predicted DNA-binding transcriptional regulator of TetR/AcrR family (NP_350189.1) from Clostridium acetobutylicum at 2.10 A resolution ; _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3B81 _cell.length_a 89.967 _cell.length_b 89.967 _cell.length_c 70.274 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3B81 _symmetry.Int_Tables_number 94 _symmetry.space_group_name_H-M 'P 42 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Transcriptional regulator, AcrR family' 23461.463 1 ? ? ? ? 2 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 3 ? ? ? ? 4 water nat water 18.015 82 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)SRTNINFNNKRTELANKIWDIFIANGYENTTLAFIINKLGISKGALYHYFSSKEECADAAIENRVAFFSNEVLK ESEEGLNSIERLKKILLAGIKITSVNEQVKEINSPSNKIFHQKL(MSE)VAIIKYFAPIYADIISQGNEEGVFKVKYPLE TAEIILTLSHFYLDEDLFKWKKED(MSE)SLKLTAFKETLIKILDADEDTFDFIK ; _entity_poly.pdbx_seq_one_letter_code_can ;GMSRTNINFNNKRTELANKIWDIFIANGYENTTLAFIINKLGISKGALYHYFSSKEECADAAIENRVAFFSNEVLKESEE GLNSIERLKKILLAGIKITSVNEQVKEINSPSNKIFHQKLMVAIIKYFAPIYADIISQGNEEGVFKVKYPLETAEIILTL SHFYLDEDLFKWKKEDMSLKLTAFKETLIKILDADEDTFDFIK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 379155 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 SER n 1 4 ARG n 1 5 THR n 1 6 ASN n 1 7 ILE n 1 8 ASN n 1 9 PHE n 1 10 ASN n 1 11 ASN n 1 12 LYS n 1 13 ARG n 1 14 THR n 1 15 GLU n 1 16 LEU n 1 17 ALA n 1 18 ASN n 1 19 LYS n 1 20 ILE n 1 21 TRP n 1 22 ASP n 1 23 ILE n 1 24 PHE n 1 25 ILE n 1 26 ALA n 1 27 ASN n 1 28 GLY n 1 29 TYR n 1 30 GLU n 1 31 ASN n 1 32 THR n 1 33 THR n 1 34 LEU n 1 35 ALA n 1 36 PHE n 1 37 ILE n 1 38 ILE n 1 39 ASN n 1 40 LYS n 1 41 LEU n 1 42 GLY n 1 43 ILE n 1 44 SER n 1 45 LYS n 1 46 GLY n 1 47 ALA n 1 48 LEU n 1 49 TYR n 1 50 HIS n 1 51 TYR n 1 52 PHE n 1 53 SER n 1 54 SER n 1 55 LYS n 1 56 GLU n 1 57 GLU n 1 58 CYS n 1 59 ALA n 1 60 ASP n 1 61 ALA n 1 62 ALA n 1 63 ILE n 1 64 GLU n 1 65 ASN n 1 66 ARG n 1 67 VAL n 1 68 ALA n 1 69 PHE n 1 70 PHE n 1 71 SER n 1 72 ASN n 1 73 GLU n 1 74 VAL n 1 75 LEU n 1 76 LYS n 1 77 GLU n 1 78 SER n 1 79 GLU n 1 80 GLU n 1 81 GLY n 1 82 LEU n 1 83 ASN n 1 84 SER n 1 85 ILE n 1 86 GLU n 1 87 ARG n 1 88 LEU n 1 89 LYS n 1 90 LYS n 1 91 ILE n 1 92 LEU n 1 93 LEU n 1 94 ALA n 1 95 GLY n 1 96 ILE n 1 97 LYS n 1 98 ILE n 1 99 THR n 1 100 SER n 1 101 VAL n 1 102 ASN n 1 103 GLU n 1 104 GLN n 1 105 VAL n 1 106 LYS n 1 107 GLU n 1 108 ILE n 1 109 ASN n 1 110 SER n 1 111 PRO n 1 112 SER n 1 113 ASN n 1 114 LYS n 1 115 ILE n 1 116 PHE n 1 117 HIS n 1 118 GLN n 1 119 LYS n 1 120 LEU n 1 121 MSE n 1 122 VAL n 1 123 ALA n 1 124 ILE n 1 125 ILE n 1 126 LYS n 1 127 TYR n 1 128 PHE n 1 129 ALA n 1 130 PRO n 1 131 ILE n 1 132 TYR n 1 133 ALA n 1 134 ASP n 1 135 ILE n 1 136 ILE n 1 137 SER n 1 138 GLN n 1 139 GLY n 1 140 ASN n 1 141 GLU n 1 142 GLU n 1 143 GLY n 1 144 VAL n 1 145 PHE n 1 146 LYS n 1 147 VAL n 1 148 LYS n 1 149 TYR n 1 150 PRO n 1 151 LEU n 1 152 GLU n 1 153 THR n 1 154 ALA n 1 155 GLU n 1 156 ILE n 1 157 ILE n 1 158 LEU n 1 159 THR n 1 160 LEU n 1 161 SER n 1 162 HIS n 1 163 PHE n 1 164 TYR n 1 165 LEU n 1 166 ASP n 1 167 GLU n 1 168 ASP n 1 169 LEU n 1 170 PHE n 1 171 LYS n 1 172 TRP n 1 173 LYS n 1 174 LYS n 1 175 GLU n 1 176 ASP n 1 177 MSE n 1 178 SER n 1 179 LEU n 1 180 LYS n 1 181 LEU n 1 182 THR n 1 183 ALA n 1 184 PHE n 1 185 LYS n 1 186 GLU n 1 187 THR n 1 188 LEU n 1 189 ILE n 1 190 LYS n 1 191 ILE n 1 192 LEU n 1 193 ASP n 1 194 ALA n 1 195 ASP n 1 196 GLU n 1 197 ASP n 1 198 THR n 1 199 PHE n 1 200 ASP n 1 201 PHE n 1 202 ILE n 1 203 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Clostridium _entity_src_gen.pdbx_gene_src_gene 'NP_350189.1, CA_C3606' _entity_src_gen.gene_src_species 'Clostridium acetobutylicum' _entity_src_gen.gene_src_strain 'DSM 792, JCM 1419, LMG 5710, VKM B-1787' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Clostridium acetobutylicum ATCC 824' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 272562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name speedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q97D74_CLOAB _struct_ref.pdbx_db_accession Q97D74 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSRTNINFNNKRTELANKIWDIFIANGYENTTLAFIINKLGISKGALYHYFSSKEECADAAIENRVAFFSNEVLKESEEG LNSIERLKKILLAGIKITSVNEQVKEINSPSNKIFHQKLMVAIIKYFAPIYADIISQGNEEGVFKVKYPLETAEIILTLS HFYLDEDLFKWKKEDMSLKLTAFKETLIKILDADEDTFDFIK ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3B81 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 203 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q97D74 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 202 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 202 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3B81 _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q97D74 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3B81 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.03 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 59.41 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details 'NANODROP, 25.0% Ethylene glycol, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.details ? _diffrn_detector.pdbx_collection_date 2007-10-05 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9798 1.0 2 0.9537 1.0 3 0.9796 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline 8.2.2 _diffrn_source.type 'ALS BEAMLINE 8.2.2' _diffrn_source.pdbx_wavelength_list '0.9798, 0.9537, 0.9796' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ALS # _reflns.entry_id 3B81 _reflns.d_resolution_high 2.10 _reflns.d_resolution_low 29.988 _reflns.number_obs 17429 _reflns.pdbx_Rmerge_I_obs 0.089 _reflns.pdbx_netI_over_sigmaI 6.000 _reflns.pdbx_Rsym_value 0.089 _reflns.pdbx_redundancy 6.500 _reflns.percent_possible_obs 100.000 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.10 2.15 ? 8668 ? 0.983 0.7 0.983 ? 6.80 ? 1282 100.00 1 1 2.15 2.21 ? 8210 ? 0.771 0.9 0.771 ? 6.80 ? 1208 100.00 2 1 2.21 2.28 ? 7544 ? 0.741 0.5 0.741 ? 6.30 ? 1198 100.00 3 1 2.28 2.35 ? 7866 ? 0.501 1.5 0.501 ? 6.80 ? 1165 100.00 4 1 2.35 2.42 ? 7703 ? 0.445 1.7 0.445 ? 6.70 ? 1144 100.00 5 1 2.42 2.51 ? 7304 ? 0.320 2.3 0.320 ? 6.70 ? 1085 100.00 6 1 2.51 2.60 ? 7104 ? 0.276 2.7 0.276 ? 6.70 ? 1056 100.00 7 1 2.60 2.71 ? 6553 ? 0.217 3.3 0.217 ? 6.50 ? 1012 100.00 8 1 2.71 2.83 ? 6606 ? 0.171 4.3 0.171 ? 6.70 ? 989 100.00 9 1 2.83 2.97 ? 6231 ? 0.140 5.3 0.140 ? 6.70 ? 936 100.00 10 1 2.97 3.13 ? 5876 ? 0.102 6.9 0.102 ? 6.60 ? 891 100.00 11 1 3.13 3.32 ? 5616 ? 0.075 9.3 0.075 ? 6.50 ? 858 100.00 12 1 3.32 3.55 ? 5107 ? 0.070 9.2 0.070 ? 6.30 ? 813 100.00 13 1 3.55 3.83 ? 4696 ? 0.058 10.8 0.058 ? 6.30 ? 744 100.00 14 1 3.83 4.20 ? 4290 ? 0.051 12.4 0.051 ? 6.10 ? 701 100.00 15 1 4.20 4.70 ? 3862 ? 0.051 12.0 0.051 ? 6.00 ? 644 100.00 16 1 4.70 5.42 ? 3182 ? 0.066 9.1 0.066 ? 5.50 ? 575 100.00 17 1 5.42 6.64 ? 3002 ? 0.069 8.8 0.069 ? 6.10 ? 494 100.00 18 1 6.64 9.39 ? 2414 ? 0.034 18.5 0.034 ? 6.20 ? 390 100.00 19 1 9.39 29.988 ? 1322 ? 0.027 23.2 0.027 ? 5.40 ? 244 97.10 20 1 # _refine.entry_id 3B81 _refine.ls_d_res_high 2.100 _refine.ls_d_res_low 29.988 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.900 _refine.ls_number_reflns_obs 17389 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. RESIDUES 0-5, 96-106, AND 200-202 ARE DISORDERED AND NOT INCLUDED IN THE MODEL. 5. EDO MOLECULES FROM THE CRYO SOLUTION ARE MODELED. ; _refine.ls_R_factor_obs 0.204 _refine.ls_R_factor_R_work 0.203 _refine.ls_R_factor_R_free 0.234 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 882 _refine.B_iso_mean 41.914 _refine.aniso_B[1][1] -1.650 _refine.aniso_B[2][2] -1.650 _refine.aniso_B[3][3] 3.290 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.954 _refine.correlation_coeff_Fo_to_Fc_free 0.953 _refine.pdbx_overall_ESU_R 0.172 _refine.pdbx_overall_ESU_R_Free 0.155 _refine.overall_SU_ML 0.148 _refine.overall_SU_B 11.790 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1468 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 13 _refine_hist.number_atoms_solvent 82 _refine_hist.number_atoms_total 1563 _refine_hist.d_res_high 2.100 _refine_hist.d_res_low 29.988 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1543 0.016 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1050 0.003 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2084 1.514 1.963 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2586 1.298 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 193 3.409 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 71 33.353 25.634 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 288 11.533 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 3 20.909 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 238 0.098 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1684 0.006 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 305 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 302 0.176 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 898 0.124 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 740 0.159 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 691 0.072 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 48 0.096 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 13 0.128 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 39 0.135 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 15 0.089 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 927 1.621 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 375 0.329 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1501 3.054 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 633 4.707 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 577 7.034 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.100 _refine_ls_shell.d_res_low 2.155 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.920 _refine_ls_shell.number_reflns_R_work 1223 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.274 _refine_ls_shell.R_factor_R_free 0.292 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 56 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1279 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3B81 _struct.title ;Crystal structure of predicted DNA-binding transcriptional regulator of TetR/AcrR family (NP_350189.1) from Clostridium acetobutylicum at 2.10 A resolution ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;NP_350189.1, predicted DNA-binding transcriptional regulator of TetR/AcrR family, Bacterial regulatory proteins, tetR family, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, Transcription regulation, TRANSCRIPTION REGULATOR ; _struct_keywords.pdbx_keywords 'TRANSCRIPTION REGULATOR' _struct_keywords.entry_id 3B81 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 8 ? GLY A 28 ? ASN A 7 GLY A 27 1 ? 21 HELX_P HELX_P2 2 THR A 33 ? GLY A 42 ? THR A 32 GLY A 41 1 ? 10 HELX_P HELX_P3 3 SER A 44 ? HIS A 50 ? SER A 43 HIS A 49 1 ? 7 HELX_P HELX_P4 4 SER A 54 ? SER A 78 ? SER A 53 SER A 77 1 ? 25 HELX_P HELX_P5 5 ASN A 83 ? LEU A 93 ? ASN A 82 LEU A 92 1 ? 11 HELX_P HELX_P6 6 SER A 110 ? GLY A 143 ? SER A 109 GLY A 142 1 ? 34 HELX_P HELX_P7 7 TYR A 149 ? PHE A 163 ? TYR A 148 PHE A 162 1 ? 15 HELX_P HELX_P8 8 ASP A 166 ? LYS A 171 ? ASP A 165 LYS A 170 1 ? 6 HELX_P HELX_P9 9 LYS A 173 ? GLU A 175 ? LYS A 172 GLU A 174 5 ? 3 HELX_P HELX_P10 10 ASP A 176 ? ASP A 193 ? ASP A 175 ASP A 192 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LEU 120 C ? ? ? 1_555 A MSE 121 N ? ? A LEU 119 A MSE 120 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale2 covale both ? A MSE 121 C ? ? ? 1_555 A VAL 122 N ? ? A MSE 120 A VAL 121 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale3 covale both ? A ASP 176 C ? ? ? 1_555 A MSE 177 N ? ? A ASP 175 A MSE 176 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale4 covale both ? A MSE 177 C ? ? ? 1_555 A SER 178 N ? ? A MSE 176 A SER 177 1_555 ? ? ? ? ? ? ? 1.329 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NA 203 ? 3 'BINDING SITE FOR RESIDUE NA A 203' AC2 Software A EDO 204 ? 4 'BINDING SITE FOR RESIDUE EDO A 204' AC3 Software A EDO 205 ? 4 'BINDING SITE FOR RESIDUE EDO A 205' AC4 Software A EDO 206 ? 7 'BINDING SITE FOR RESIDUE EDO A 206' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 GLU A 152 ? GLU A 151 . ? 1_555 ? 2 AC1 3 GLU A 155 ? GLU A 154 . ? 1_555 ? 3 AC1 3 LYS A 180 ? LYS A 179 . ? 7_556 ? 4 AC2 4 ARG A 13 ? ARG A 12 . ? 1_555 ? 5 AC2 4 GLU A 57 ? GLU A 56 . ? 1_555 ? 6 AC2 4 ALA A 61 ? ALA A 60 . ? 1_555 ? 7 AC2 4 GLU A 64 ? GLU A 63 . ? 1_555 ? 8 AC3 4 ILE A 91 ? ILE A 90 . ? 1_555 ? 9 AC3 4 ALA A 94 ? ALA A 93 . ? 1_555 ? 10 AC3 4 TYR A 132 ? TYR A 131 . ? 1_555 ? 11 AC3 4 HIS A 162 ? HIS A 161 . ? 1_555 ? 12 AC4 7 GLY A 46 ? GLY A 45 . ? 1_555 ? 13 AC4 7 GLY A 143 ? GLY A 142 . ? 5_545 ? 14 AC4 7 LYS A 146 ? LYS A 145 . ? 6_455 ? 15 AC4 7 LYS A 148 ? LYS A 147 . ? 6_455 ? 16 AC4 7 ASP A 195 ? ASP A 194 . ? 5_545 ? 17 AC4 7 HOH F . ? HOH A 232 . ? 5_545 ? 18 AC4 7 HOH F . ? HOH A 266 . ? 1_555 ? # _atom_sites.entry_id 3B81 _atom_sites.fract_transf_matrix[1][1] 0.011115 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011115 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014230 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N NA O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 ? ? ? A . n A 1 3 SER 3 2 ? ? ? A . n A 1 4 ARG 4 3 ? ? ? A . n A 1 5 THR 5 4 ? ? ? A . n A 1 6 ASN 6 5 ? ? ? A . n A 1 7 ILE 7 6 6 ILE ILE A . n A 1 8 ASN 8 7 7 ASN ASN A . n A 1 9 PHE 9 8 8 PHE PHE A . n A 1 10 ASN 10 9 9 ASN ASN A . n A 1 11 ASN 11 10 10 ASN ASN A . n A 1 12 LYS 12 11 11 LYS LYS A . n A 1 13 ARG 13 12 12 ARG ARG A . n A 1 14 THR 14 13 13 THR THR A . n A 1 15 GLU 15 14 14 GLU GLU A . n A 1 16 LEU 16 15 15 LEU LEU A . n A 1 17 ALA 17 16 16 ALA ALA A . n A 1 18 ASN 18 17 17 ASN ASN A . n A 1 19 LYS 19 18 18 LYS LYS A . n A 1 20 ILE 20 19 19 ILE ILE A . n A 1 21 TRP 21 20 20 TRP TRP A . n A 1 22 ASP 22 21 21 ASP ASP A . n A 1 23 ILE 23 22 22 ILE ILE A . n A 1 24 PHE 24 23 23 PHE PHE A . n A 1 25 ILE 25 24 24 ILE ILE A . n A 1 26 ALA 26 25 25 ALA ALA A . n A 1 27 ASN 27 26 26 ASN ASN A . n A 1 28 GLY 28 27 27 GLY GLY A . n A 1 29 TYR 29 28 28 TYR TYR A . n A 1 30 GLU 30 29 29 GLU GLU A . n A 1 31 ASN 31 30 30 ASN ASN A . n A 1 32 THR 32 31 31 THR THR A . n A 1 33 THR 33 32 32 THR THR A . n A 1 34 LEU 34 33 33 LEU LEU A . n A 1 35 ALA 35 34 34 ALA ALA A . n A 1 36 PHE 36 35 35 PHE PHE A . n A 1 37 ILE 37 36 36 ILE ILE A . n A 1 38 ILE 38 37 37 ILE ILE A . n A 1 39 ASN 39 38 38 ASN ASN A . n A 1 40 LYS 40 39 39 LYS LYS A . n A 1 41 LEU 41 40 40 LEU LEU A . n A 1 42 GLY 42 41 41 GLY GLY A . n A 1 43 ILE 43 42 42 ILE ILE A . n A 1 44 SER 44 43 43 SER SER A . n A 1 45 LYS 45 44 44 LYS LYS A . n A 1 46 GLY 46 45 45 GLY GLY A . n A 1 47 ALA 47 46 46 ALA ALA A . n A 1 48 LEU 48 47 47 LEU LEU A . n A 1 49 TYR 49 48 48 TYR TYR A . n A 1 50 HIS 50 49 49 HIS HIS A . n A 1 51 TYR 51 50 50 TYR TYR A . n A 1 52 PHE 52 51 51 PHE PHE A . n A 1 53 SER 53 52 52 SER SER A . n A 1 54 SER 54 53 53 SER SER A . n A 1 55 LYS 55 54 54 LYS LYS A . n A 1 56 GLU 56 55 55 GLU GLU A . n A 1 57 GLU 57 56 56 GLU GLU A . n A 1 58 CYS 58 57 57 CYS CYS A . n A 1 59 ALA 59 58 58 ALA ALA A . n A 1 60 ASP 60 59 59 ASP ASP A . n A 1 61 ALA 61 60 60 ALA ALA A . n A 1 62 ALA 62 61 61 ALA ALA A . n A 1 63 ILE 63 62 62 ILE ILE A . n A 1 64 GLU 64 63 63 GLU GLU A . n A 1 65 ASN 65 64 64 ASN ASN A . n A 1 66 ARG 66 65 65 ARG ARG A . n A 1 67 VAL 67 66 66 VAL VAL A . n A 1 68 ALA 68 67 67 ALA ALA A . n A 1 69 PHE 69 68 68 PHE PHE A . n A 1 70 PHE 70 69 69 PHE PHE A . n A 1 71 SER 71 70 70 SER SER A . n A 1 72 ASN 72 71 71 ASN ASN A . n A 1 73 GLU 73 72 72 GLU GLU A . n A 1 74 VAL 74 73 73 VAL VAL A . n A 1 75 LEU 75 74 74 LEU LEU A . n A 1 76 LYS 76 75 75 LYS LYS A . n A 1 77 GLU 77 76 76 GLU GLU A . n A 1 78 SER 78 77 77 SER SER A . n A 1 79 GLU 79 78 78 GLU GLU A . n A 1 80 GLU 80 79 79 GLU GLU A . n A 1 81 GLY 81 80 80 GLY GLY A . n A 1 82 LEU 82 81 81 LEU LEU A . n A 1 83 ASN 83 82 82 ASN ASN A . n A 1 84 SER 84 83 83 SER SER A . n A 1 85 ILE 85 84 84 ILE ILE A . n A 1 86 GLU 86 85 85 GLU GLU A . n A 1 87 ARG 87 86 86 ARG ARG A . n A 1 88 LEU 88 87 87 LEU LEU A . n A 1 89 LYS 89 88 88 LYS LYS A . n A 1 90 LYS 90 89 89 LYS LYS A . n A 1 91 ILE 91 90 90 ILE ILE A . n A 1 92 LEU 92 91 91 LEU LEU A . n A 1 93 LEU 93 92 92 LEU LEU A . n A 1 94 ALA 94 93 93 ALA ALA A . n A 1 95 GLY 95 94 94 GLY GLY A . n A 1 96 ILE 96 95 95 ILE ILE A . n A 1 97 LYS 97 96 ? ? ? A . n A 1 98 ILE 98 97 ? ? ? A . n A 1 99 THR 99 98 ? ? ? A . n A 1 100 SER 100 99 ? ? ? A . n A 1 101 VAL 101 100 ? ? ? A . n A 1 102 ASN 102 101 ? ? ? A . n A 1 103 GLU 103 102 ? ? ? A . n A 1 104 GLN 104 103 ? ? ? A . n A 1 105 VAL 105 104 ? ? ? A . n A 1 106 LYS 106 105 ? ? ? A . n A 1 107 GLU 107 106 ? ? ? A . n A 1 108 ILE 108 107 107 ILE ILE A . n A 1 109 ASN 109 108 108 ASN ASN A . n A 1 110 SER 110 109 109 SER SER A . n A 1 111 PRO 111 110 110 PRO PRO A . n A 1 112 SER 112 111 111 SER SER A . n A 1 113 ASN 113 112 112 ASN ASN A . n A 1 114 LYS 114 113 113 LYS LYS A . n A 1 115 ILE 115 114 114 ILE ILE A . n A 1 116 PHE 116 115 115 PHE PHE A . n A 1 117 HIS 117 116 116 HIS HIS A . n A 1 118 GLN 118 117 117 GLN GLN A . n A 1 119 LYS 119 118 118 LYS LYS A . n A 1 120 LEU 120 119 119 LEU LEU A . n A 1 121 MSE 121 120 120 MSE MSE A . n A 1 122 VAL 122 121 121 VAL VAL A . n A 1 123 ALA 123 122 122 ALA ALA A . n A 1 124 ILE 124 123 123 ILE ILE A . n A 1 125 ILE 125 124 124 ILE ILE A . n A 1 126 LYS 126 125 125 LYS LYS A . n A 1 127 TYR 127 126 126 TYR TYR A . n A 1 128 PHE 128 127 127 PHE PHE A . n A 1 129 ALA 129 128 128 ALA ALA A . n A 1 130 PRO 130 129 129 PRO PRO A . n A 1 131 ILE 131 130 130 ILE ILE A . n A 1 132 TYR 132 131 131 TYR TYR A . n A 1 133 ALA 133 132 132 ALA ALA A . n A 1 134 ASP 134 133 133 ASP ASP A . n A 1 135 ILE 135 134 134 ILE ILE A . n A 1 136 ILE 136 135 135 ILE ILE A . n A 1 137 SER 137 136 136 SER SER A . n A 1 138 GLN 138 137 137 GLN GLN A . n A 1 139 GLY 139 138 138 GLY GLY A . n A 1 140 ASN 140 139 139 ASN ASN A . n A 1 141 GLU 141 140 140 GLU GLU A . n A 1 142 GLU 142 141 141 GLU GLU A . n A 1 143 GLY 143 142 142 GLY GLY A . n A 1 144 VAL 144 143 143 VAL VAL A . n A 1 145 PHE 145 144 144 PHE PHE A . n A 1 146 LYS 146 145 145 LYS LYS A . n A 1 147 VAL 147 146 146 VAL VAL A . n A 1 148 LYS 148 147 147 LYS LYS A . n A 1 149 TYR 149 148 148 TYR TYR A . n A 1 150 PRO 150 149 149 PRO PRO A . n A 1 151 LEU 151 150 150 LEU LEU A . n A 1 152 GLU 152 151 151 GLU GLU A . n A 1 153 THR 153 152 152 THR THR A . n A 1 154 ALA 154 153 153 ALA ALA A . n A 1 155 GLU 155 154 154 GLU GLU A . n A 1 156 ILE 156 155 155 ILE ILE A . n A 1 157 ILE 157 156 156 ILE ILE A . n A 1 158 LEU 158 157 157 LEU LEU A . n A 1 159 THR 159 158 158 THR THR A . n A 1 160 LEU 160 159 159 LEU LEU A . n A 1 161 SER 161 160 160 SER SER A . n A 1 162 HIS 162 161 161 HIS HIS A . n A 1 163 PHE 163 162 162 PHE PHE A . n A 1 164 TYR 164 163 163 TYR TYR A . n A 1 165 LEU 165 164 164 LEU LEU A . n A 1 166 ASP 166 165 165 ASP ASP A . n A 1 167 GLU 167 166 166 GLU GLU A . n A 1 168 ASP 168 167 167 ASP ASP A . n A 1 169 LEU 169 168 168 LEU LEU A . n A 1 170 PHE 170 169 169 PHE PHE A . n A 1 171 LYS 171 170 170 LYS LYS A . n A 1 172 TRP 172 171 171 TRP TRP A . n A 1 173 LYS 173 172 172 LYS LYS A . n A 1 174 LYS 174 173 173 LYS LYS A . n A 1 175 GLU 175 174 174 GLU GLU A . n A 1 176 ASP 176 175 175 ASP ASP A . n A 1 177 MSE 177 176 176 MSE MSE A . n A 1 178 SER 178 177 177 SER SER A . n A 1 179 LEU 179 178 178 LEU LEU A . n A 1 180 LYS 180 179 179 LYS LYS A . n A 1 181 LEU 181 180 180 LEU LEU A . n A 1 182 THR 182 181 181 THR THR A . n A 1 183 ALA 183 182 182 ALA ALA A . n A 1 184 PHE 184 183 183 PHE PHE A . n A 1 185 LYS 185 184 184 LYS LYS A . n A 1 186 GLU 186 185 185 GLU GLU A . n A 1 187 THR 187 186 186 THR THR A . n A 1 188 LEU 188 187 187 LEU LEU A . n A 1 189 ILE 189 188 188 ILE ILE A . n A 1 190 LYS 190 189 189 LYS LYS A . n A 1 191 ILE 191 190 190 ILE ILE A . n A 1 192 LEU 192 191 191 LEU LEU A . n A 1 193 ASP 193 192 192 ASP ASP A . n A 1 194 ALA 194 193 193 ALA ALA A . n A 1 195 ASP 195 194 194 ASP ASP A . n A 1 196 GLU 196 195 195 GLU GLU A . n A 1 197 ASP 197 196 196 ASP ASP A . n A 1 198 THR 198 197 197 THR THR A . n A 1 199 PHE 199 198 198 PHE PHE A . n A 1 200 ASP 200 199 199 ASP ASP A . n A 1 201 PHE 201 200 ? ? ? A . n A 1 202 ILE 202 201 ? ? ? A . n A 1 203 LYS 203 202 ? ? ? A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA 1 203 1 NA NA A . C 3 EDO 1 204 2 EDO EDO A . D 3 EDO 1 205 3 EDO EDO A . E 3 EDO 1 206 4 EDO EDO A . F 4 HOH 1 207 5 HOH HOH A . F 4 HOH 2 208 6 HOH HOH A . F 4 HOH 3 209 7 HOH HOH A . F 4 HOH 4 210 8 HOH HOH A . F 4 HOH 5 211 9 HOH HOH A . F 4 HOH 6 212 10 HOH HOH A . F 4 HOH 7 213 11 HOH HOH A . F 4 HOH 8 214 12 HOH HOH A . F 4 HOH 9 215 13 HOH HOH A . F 4 HOH 10 216 14 HOH HOH A . F 4 HOH 11 217 15 HOH HOH A . F 4 HOH 12 218 16 HOH HOH A . F 4 HOH 13 219 17 HOH HOH A . F 4 HOH 14 220 18 HOH HOH A . F 4 HOH 15 221 19 HOH HOH A . F 4 HOH 16 222 20 HOH HOH A . F 4 HOH 17 223 21 HOH HOH A . F 4 HOH 18 224 22 HOH HOH A . F 4 HOH 19 225 23 HOH HOH A . F 4 HOH 20 226 24 HOH HOH A . F 4 HOH 21 227 25 HOH HOH A . F 4 HOH 22 228 26 HOH HOH A . F 4 HOH 23 229 27 HOH HOH A . F 4 HOH 24 230 28 HOH HOH A . F 4 HOH 25 231 29 HOH HOH A . F 4 HOH 26 232 30 HOH HOH A . F 4 HOH 27 233 31 HOH HOH A . F 4 HOH 28 234 32 HOH HOH A . F 4 HOH 29 235 33 HOH HOH A . F 4 HOH 30 236 34 HOH HOH A . F 4 HOH 31 237 35 HOH HOH A . F 4 HOH 32 238 36 HOH HOH A . F 4 HOH 33 239 37 HOH HOH A . F 4 HOH 34 240 38 HOH HOH A . F 4 HOH 35 241 39 HOH HOH A . F 4 HOH 36 242 40 HOH HOH A . F 4 HOH 37 243 41 HOH HOH A . F 4 HOH 38 244 42 HOH HOH A . F 4 HOH 39 245 43 HOH HOH A . F 4 HOH 40 246 44 HOH HOH A . F 4 HOH 41 247 45 HOH HOH A . F 4 HOH 42 248 46 HOH HOH A . F 4 HOH 43 249 47 HOH HOH A . F 4 HOH 44 250 48 HOH HOH A . F 4 HOH 45 251 49 HOH HOH A . F 4 HOH 46 252 50 HOH HOH A . F 4 HOH 47 253 51 HOH HOH A . F 4 HOH 48 254 52 HOH HOH A . F 4 HOH 49 255 53 HOH HOH A . F 4 HOH 50 256 54 HOH HOH A . F 4 HOH 51 257 55 HOH HOH A . F 4 HOH 52 258 56 HOH HOH A . F 4 HOH 53 259 57 HOH HOH A . F 4 HOH 54 260 58 HOH HOH A . F 4 HOH 55 261 59 HOH HOH A . F 4 HOH 56 262 60 HOH HOH A . F 4 HOH 57 263 61 HOH HOH A . F 4 HOH 58 264 62 HOH HOH A . F 4 HOH 59 265 63 HOH HOH A . F 4 HOH 60 266 64 HOH HOH A . F 4 HOH 61 267 65 HOH HOH A . F 4 HOH 62 268 66 HOH HOH A . F 4 HOH 63 269 67 HOH HOH A . F 4 HOH 64 270 68 HOH HOH A . F 4 HOH 65 271 69 HOH HOH A . F 4 HOH 66 272 70 HOH HOH A . F 4 HOH 67 273 71 HOH HOH A . F 4 HOH 68 274 72 HOH HOH A . F 4 HOH 69 275 73 HOH HOH A . F 4 HOH 70 276 74 HOH HOH A . F 4 HOH 71 277 75 HOH HOH A . F 4 HOH 72 278 76 HOH HOH A . F 4 HOH 73 279 77 HOH HOH A . F 4 HOH 74 280 78 HOH HOH A . F 4 HOH 75 281 79 HOH HOH A . F 4 HOH 76 282 80 HOH HOH A . F 4 HOH 77 283 81 HOH HOH A . F 4 HOH 78 284 82 HOH HOH A . F 4 HOH 79 285 83 HOH HOH A . F 4 HOH 80 286 84 HOH HOH A . F 4 HOH 81 287 85 HOH HOH A . F 4 HOH 82 288 86 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 121 A MSE 120 ? MET SELENOMETHIONINE 2 A MSE 177 A MSE 176 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_prop.biol_id 1 _pdbx_struct_assembly_prop.type 'ABSA (A^2)' _pdbx_struct_assembly_prop.value 3150 _pdbx_struct_assembly_prop.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_556 y,x,-z+1 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 70.2740000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 285 ? F HOH . 2 1 A HOH 287 ? F HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-11-20 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' software 3 4 'Structure model' struct_conn 4 5 'Structure model' database_2 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 20.5790 _pdbx_refine_tls.origin_y 29.9530 _pdbx_refine_tls.origin_z 25.1760 _pdbx_refine_tls.T[1][1] 0.0730 _pdbx_refine_tls.T[2][2] 0.0676 _pdbx_refine_tls.T[3][3] 0.0024 _pdbx_refine_tls.T[1][2] -0.0517 _pdbx_refine_tls.T[1][3] -0.0758 _pdbx_refine_tls.T[2][3] 0.0077 _pdbx_refine_tls.L[1][1] 3.2687 _pdbx_refine_tls.L[2][2] 2.8600 _pdbx_refine_tls.L[3][3] 0.4864 _pdbx_refine_tls.L[1][2] 2.3471 _pdbx_refine_tls.L[1][3] 0.5889 _pdbx_refine_tls.L[2][3] 1.0913 _pdbx_refine_tls.S[1][1] -0.2318 _pdbx_refine_tls.S[2][2] 0.0590 _pdbx_refine_tls.S[3][3] 0.1728 _pdbx_refine_tls.S[1][2] 0.2803 _pdbx_refine_tls.S[1][3] 0.3750 _pdbx_refine_tls.S[2][3] 0.5192 _pdbx_refine_tls.S[2][1] -0.3561 _pdbx_refine_tls.S[3][1] 0.0273 _pdbx_refine_tls.S[3][2] -0.1497 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 7 A 96 ? A 6 A 95 'X-RAY DIFFRACTION' ? 2 1 A 108 A 200 ? A 107 A 199 'X-RAY DIFFRACTION' ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 SCALA . ? other 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/INDEX.html Fortran_77 ? 5 PDB_EXTRACT 3.000 'July 2, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 6 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 7 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 SHARP . ? ? ? ? phasing ? ? ? 10 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ; SEQUENCE THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; # _pdbx_entry_details.entry_id 3B81 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;REMARK 999 SEQUENCE: THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 86 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 86 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 86 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.47 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 3.17 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 108 ? ? -108.09 63.21 2 1 PHE A 198 ? ? -109.52 47.71 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 11 ? CG ? A LYS 12 CG 2 1 Y 1 A LYS 11 ? CD ? A LYS 12 CD 3 1 Y 1 A LYS 11 ? CE ? A LYS 12 CE 4 1 Y 1 A LYS 11 ? NZ ? A LYS 12 NZ 5 1 Y 1 A GLU 14 ? CG ? A GLU 15 CG 6 1 Y 1 A GLU 14 ? CD ? A GLU 15 CD 7 1 Y 1 A GLU 14 ? OE1 ? A GLU 15 OE1 8 1 Y 1 A GLU 14 ? OE2 ? A GLU 15 OE2 9 1 Y 1 A LYS 75 ? CD ? A LYS 76 CD 10 1 Y 1 A LYS 75 ? CE ? A LYS 76 CE 11 1 Y 1 A LYS 75 ? NZ ? A LYS 76 NZ 12 1 Y 1 A GLU 78 ? CD ? A GLU 79 CD 13 1 Y 1 A GLU 78 ? OE1 ? A GLU 79 OE1 14 1 Y 1 A GLU 78 ? OE2 ? A GLU 79 OE2 15 1 Y 1 A LYS 170 ? CE ? A LYS 171 CE 16 1 Y 1 A LYS 170 ? NZ ? A LYS 171 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A MSE 1 ? A MSE 2 3 1 Y 1 A SER 2 ? A SER 3 4 1 Y 1 A ARG 3 ? A ARG 4 5 1 Y 1 A THR 4 ? A THR 5 6 1 Y 1 A ASN 5 ? A ASN 6 7 1 Y 1 A LYS 96 ? A LYS 97 8 1 Y 1 A ILE 97 ? A ILE 98 9 1 Y 1 A THR 98 ? A THR 99 10 1 Y 1 A SER 99 ? A SER 100 11 1 Y 1 A VAL 100 ? A VAL 101 12 1 Y 1 A ASN 101 ? A ASN 102 13 1 Y 1 A GLU 102 ? A GLU 103 14 1 Y 1 A GLN 103 ? A GLN 104 15 1 Y 1 A VAL 104 ? A VAL 105 16 1 Y 1 A LYS 105 ? A LYS 106 17 1 Y 1 A GLU 106 ? A GLU 107 18 1 Y 1 A PHE 200 ? A PHE 201 19 1 Y 1 A ILE 201 ? A ILE 202 20 1 Y 1 A LYS 202 ? A LYS 203 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SODIUM ION' NA 3 1,2-ETHANEDIOL EDO 4 water HOH #