HEADER TRANSFERASE 11-NOV-07 3BBW TITLE CRYSTAL STRUCTURE OF THE ERBB4 KINASE IN ITS INACTIVE CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: RECEPTOR TYROSINE-PROTEIN KINASE ERBB-4; COMPND 3 CHAIN: B, A; COMPND 4 SYNONYM: P180ERBB4, TYROSINE KINASE-TYPE CELL SURFACE RECEPTOR HER4; COMPND 5 EC: 2.7.10.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ERBB4, HER4; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: SF9; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PFASTBAC KEYWDS INACTIVE KINASE CONFORMATION, ALTERNATIVE SPLICING, ATP-BINDING, KEYWDS 2 GLYCOPROTEIN, MEMBRANE, NUCLEOTIDE-BINDING, PHOSPHORYLATION, KEYWDS 3 RECEPTOR, TRANSFERASE, TRANSMEMBRANE, TYROSINE-PROTEIN KINASE EXPDTA X-RAY DIFFRACTION AUTHOR C.QIU REVDAT 5 21-FEB-24 3BBW 1 REMARK REVDAT 4 25-OCT-17 3BBW 1 REMARK REVDAT 3 24-FEB-09 3BBW 1 VERSN REVDAT 2 25-MAR-08 3BBW 1 JRNL REVDAT 1 12-FEB-08 3BBW 0 JRNL AUTH C.QIU,M.K.TARRANT,S.H.CHOI,A.SATHYAMURTHY,R.BOSE,S.BANJADE, JRNL AUTH 2 A.PAL,W.G.BORNMANN,M.A.LEMMON,P.A.COLE,D.J.LEAHY JRNL TITL MECHANISM OF ACTIVATION AND INHIBITION OF THE HER4/ERBB4 JRNL TITL 2 KINASE. JRNL REF STRUCTURE V. 16 460 2008 JRNL REFN ISSN 0969-2126 JRNL PMID 18334220 JRNL DOI 10.1016/J.STR.2007.12.016 REMARK 2 REMARK 2 RESOLUTION. 4.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 9034 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.305 REMARK 3 R VALUE (WORKING SET) : 0.302 REMARK 3 FREE R VALUE : 0.354 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 428 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 4.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 4.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 592 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.54 REMARK 3 BIN R VALUE (WORKING SET) : 0.3380 REMARK 3 BIN FREE R VALUE SET COUNT : 25 REMARK 3 BIN FREE R VALUE : 0.2850 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4354 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -8.46000 REMARK 3 B22 (A**2) : -8.46000 REMARK 3 B33 (A**2) : 12.69000 REMARK 3 B12 (A**2) : -4.23000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 1.030 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 1.216 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 90.276 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.759 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.667 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4454 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6024 ; 1.639 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 537 ; 8.146 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 185 ;32.893 ;23.405 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 823 ;19.019 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 31 ;15.000 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 676 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3261 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2099 ; 0.244 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2943 ; 0.316 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 144 ; 0.182 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 35 ; 0.307 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.144 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2791 ; 0.320 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4398 ; 0.561 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1918 ; 0.505 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1626 ; 0.827 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : B A REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 B 683 B 966 1 REMARK 3 1 A 683 A 966 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 B (A): 2149 ; 0.050 ; 0.050 REMARK 3 TIGHT THERMAL 1 B (A**2): 2149 ; 0.060 ; 0.500 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3BBW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-NOV-07. REMARK 100 THE DEPOSITION ID IS D_1000045331. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAY-07 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CAMD REMARK 200 BEAMLINE : GCPCC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9061 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : 0.25300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.3 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.66700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.2 M NACL, 0.2 M MGCL2, 0.1 M HEPES, REMARK 280 PH 7.0, 2% HEXAFLUOROISOPROPANOL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.44500 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 120.89000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 90.66750 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 151.11250 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 30.22250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 677 REMARK 465 THR B 678 REMARK 465 ALA B 679 REMARK 465 PRO B 680 REMARK 465 ASN B 681 REMARK 465 GLN B 682 REMARK 465 THR B 731 REMARK 465 THR B 732 REMARK 465 GLU B 844 REMARK 465 GLY B 845 REMARK 465 ASP B 846 REMARK 465 GLU B 847 REMARK 465 LYS B 848 REMARK 465 GLU B 849 REMARK 465 TYR B 850 REMARK 465 ASN B 851 REMARK 465 ALA B 852 REMARK 465 ASP B 853 REMARK 465 GLY B 854 REMARK 465 GLY B 855 REMARK 465 LYS B 856 REMARK 465 MET B 857 REMARK 465 ASN B 974 REMARK 465 ASP B 975 REMARK 465 SER B 976 REMARK 465 LYS B 977 REMARK 465 PHE B 978 REMARK 465 PHE B 979 REMARK 465 GLN B 980 REMARK 465 ASN B 981 REMARK 465 LEU B 982 REMARK 465 LEU B 983 REMARK 465 ASP B 984 REMARK 465 GLU B 985 REMARK 465 GLU B 986 REMARK 465 ASP B 987 REMARK 465 LEU B 988 REMARK 465 GLU B 989 REMARK 465 ASP B 990 REMARK 465 MET B 991 REMARK 465 MET B 992 REMARK 465 ASP B 993 REMARK 465 ALA B 994 REMARK 465 GLU B 995 REMARK 465 GLU B 996 REMARK 465 TYR B 997 REMARK 465 LEU B 998 REMARK 465 VAL B 999 REMARK 465 PRO B 1000 REMARK 465 GLN B 1001 REMARK 465 ALA B 1002 REMARK 465 PHE B 1003 REMARK 465 ASN B 1004 REMARK 465 GLY A 677 REMARK 465 THR A 678 REMARK 465 ALA A 679 REMARK 465 PRO A 680 REMARK 465 ASN A 681 REMARK 465 GLN A 682 REMARK 465 THR A 731 REMARK 465 THR A 732 REMARK 465 GLU A 844 REMARK 465 GLY A 845 REMARK 465 ASP A 846 REMARK 465 GLU A 847 REMARK 465 LYS A 848 REMARK 465 GLU A 849 REMARK 465 TYR A 850 REMARK 465 ASN A 851 REMARK 465 ALA A 852 REMARK 465 ASP A 853 REMARK 465 GLY A 854 REMARK 465 GLY A 855 REMARK 465 LYS A 856 REMARK 465 MET A 857 REMARK 465 ARG A 967 REMARK 465 MET A 968 REMARK 465 LYS A 969 REMARK 465 LEU A 970 REMARK 465 PRO A 971 REMARK 465 SER A 972 REMARK 465 PRO A 973 REMARK 465 ASN A 974 REMARK 465 ASP A 975 REMARK 465 SER A 976 REMARK 465 LYS A 977 REMARK 465 PHE A 978 REMARK 465 PHE A 979 REMARK 465 GLN A 980 REMARK 465 ASN A 981 REMARK 465 LEU A 982 REMARK 465 LEU A 983 REMARK 465 ASP A 984 REMARK 465 GLU A 985 REMARK 465 GLU A 986 REMARK 465 ASP A 987 REMARK 465 LEU A 988 REMARK 465 GLU A 989 REMARK 465 ASP A 990 REMARK 465 MET A 991 REMARK 465 MET A 992 REMARK 465 ASP A 993 REMARK 465 ALA A 994 REMARK 465 GLU A 995 REMARK 465 GLU A 996 REMARK 465 TYR A 997 REMARK 465 LEU A 998 REMARK 465 VAL A 999 REMARK 465 PRO A 1000 REMARK 465 GLN A 1001 REMARK 465 ALA A 1002 REMARK 465 PHE A 1003 REMARK 465 ASN A 1004 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 722 C - N - CD ANGL. DEV. = -18.1 DEGREES REMARK 500 PRO B 918 C - N - CA ANGL. DEV. = 9.3 DEGREES REMARK 500 PRO A 722 C - N - CD ANGL. DEV. = -18.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL B 696 -77.72 -104.05 REMARK 500 GLU B 715 135.61 -39.26 REMARK 500 GLU B 717 53.60 -148.81 REMARK 500 PRO B 722 99.89 -3.83 REMARK 500 ALA B 736 74.18 -61.14 REMARK 500 PRO B 753 97.70 -43.84 REMARK 500 HIS B 754 17.86 102.82 REMARK 500 LYS B 787 -45.34 -20.95 REMARK 500 ARG B 817 -13.68 84.17 REMARK 500 ASP B 818 52.41 -150.95 REMARK 500 ARG B 870 39.88 30.44 REMARK 500 PHE B 891 16.77 86.12 REMARK 500 ARG B 902 2.52 -65.08 REMARK 500 PRO B 918 -48.46 -28.34 REMARK 500 ALA B 946 -70.18 -56.80 REMARK 500 ASP B 965 21.11 86.31 REMARK 500 ASP B 966 -7.28 66.20 REMARK 500 SER B 972 -131.74 -119.68 REMARK 500 VAL A 696 -75.17 -104.18 REMARK 500 GLU A 717 51.54 -145.45 REMARK 500 PRO A 722 98.74 -3.47 REMARK 500 ALA A 736 74.42 -62.57 REMARK 500 PRO A 753 98.92 -44.17 REMARK 500 HIS A 754 17.15 106.95 REMARK 500 LYS A 787 -43.53 -23.14 REMARK 500 ARG A 817 -11.24 83.05 REMARK 500 ASP A 818 52.07 -151.09 REMARK 500 ARG A 870 38.47 30.92 REMARK 500 PRO A 918 -50.66 -26.94 REMARK 500 ALA A 946 -71.20 -56.81 REMARK 500 ASP A 965 22.52 81.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ILE B 721 PRO B 722 114.40 REMARK 500 HIS B 752 PRO B 753 120.77 REMARK 500 ILE A 721 PRO A 722 114.54 REMARK 500 HIS A 752 PRO A 753 118.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3BBT RELATED DB: PDB REMARK 900 RELATED ID: 3BCE RELATED DB: PDB DBREF 3BBW B 677 1004 UNP Q15303 ERBB4_HUMAN 702 1029 DBREF 3BBW A 677 1004 UNP Q15303 ERBB4_HUMAN 702 1029 SEQRES 1 B 328 GLY THR ALA PRO ASN GLN ALA GLN LEU ARG ILE LEU LYS SEQRES 2 B 328 GLU THR GLU LEU LYS ARG VAL LYS VAL LEU GLY SER GLY SEQRES 3 B 328 ALA PHE GLY THR VAL TYR LYS GLY ILE TRP VAL PRO GLU SEQRES 4 B 328 GLY GLU THR VAL LYS ILE PRO VAL ALA ILE LYS ILE LEU SEQRES 5 B 328 ASN GLU THR THR GLY PRO LYS ALA ASN VAL GLU PHE MET SEQRES 6 B 328 ASP GLU ALA LEU ILE MET ALA SER MET ASP HIS PRO HIS SEQRES 7 B 328 LEU VAL ARG LEU LEU GLY VAL CYS LEU SER PRO THR ILE SEQRES 8 B 328 GLN LEU VAL THR GLN LEU MET PRO HIS GLY CYS LEU LEU SEQRES 9 B 328 GLU TYR VAL HIS GLU HIS LYS ASP ASN ILE GLY SER GLN SEQRES 10 B 328 LEU LEU LEU ASN TRP CYS VAL GLN ILE ALA LYS GLY MET SEQRES 11 B 328 MET TYR LEU GLU GLU ARG ARG LEU VAL HIS ARG ASP LEU SEQRES 12 B 328 ALA ALA ARG ASN VAL LEU VAL LYS SER PRO ASN HIS VAL SEQRES 13 B 328 LYS ILE THR ASP PHE GLY LEU ALA ARG LEU LEU GLU GLY SEQRES 14 B 328 ASP GLU LYS GLU TYR ASN ALA ASP GLY GLY LYS MET PRO SEQRES 15 B 328 ILE LYS TRP MET ALA LEU GLU CYS ILE HIS TYR ARG LYS SEQRES 16 B 328 PHE THR HIS GLN SER ASP VAL TRP SER TYR GLY VAL THR SEQRES 17 B 328 ILE TRP GLU LEU MET THR PHE GLY GLY LYS PRO TYR ASP SEQRES 18 B 328 GLY ILE PRO THR ARG GLU ILE PRO ASP LEU LEU GLU LYS SEQRES 19 B 328 GLY GLU ARG LEU PRO GLN PRO PRO ILE CYS THR ILE ASP SEQRES 20 B 328 VAL TYR MET VAL MET VAL LYS CYS TRP MET ILE ASP ALA SEQRES 21 B 328 ASP SER ARG PRO LYS PHE LYS GLU LEU ALA ALA GLU PHE SEQRES 22 B 328 SER ARG MET ALA ARG ASP PRO GLN ARG TYR LEU VAL ILE SEQRES 23 B 328 GLN GLY ASP ASP ARG MET LYS LEU PRO SER PRO ASN ASP SEQRES 24 B 328 SER LYS PHE PHE GLN ASN LEU LEU ASP GLU GLU ASP LEU SEQRES 25 B 328 GLU ASP MET MET ASP ALA GLU GLU TYR LEU VAL PRO GLN SEQRES 26 B 328 ALA PHE ASN SEQRES 1 A 328 GLY THR ALA PRO ASN GLN ALA GLN LEU ARG ILE LEU LYS SEQRES 2 A 328 GLU THR GLU LEU LYS ARG VAL LYS VAL LEU GLY SER GLY SEQRES 3 A 328 ALA PHE GLY THR VAL TYR LYS GLY ILE TRP VAL PRO GLU SEQRES 4 A 328 GLY GLU THR VAL LYS ILE PRO VAL ALA ILE LYS ILE LEU SEQRES 5 A 328 ASN GLU THR THR GLY PRO LYS ALA ASN VAL GLU PHE MET SEQRES 6 A 328 ASP GLU ALA LEU ILE MET ALA SER MET ASP HIS PRO HIS SEQRES 7 A 328 LEU VAL ARG LEU LEU GLY VAL CYS LEU SER PRO THR ILE SEQRES 8 A 328 GLN LEU VAL THR GLN LEU MET PRO HIS GLY CYS LEU LEU SEQRES 9 A 328 GLU TYR VAL HIS GLU HIS LYS ASP ASN ILE GLY SER GLN SEQRES 10 A 328 LEU LEU LEU ASN TRP CYS VAL GLN ILE ALA LYS GLY MET SEQRES 11 A 328 MET TYR LEU GLU GLU ARG ARG LEU VAL HIS ARG ASP LEU SEQRES 12 A 328 ALA ALA ARG ASN VAL LEU VAL LYS SER PRO ASN HIS VAL SEQRES 13 A 328 LYS ILE THR ASP PHE GLY LEU ALA ARG LEU LEU GLU GLY SEQRES 14 A 328 ASP GLU LYS GLU TYR ASN ALA ASP GLY GLY LYS MET PRO SEQRES 15 A 328 ILE LYS TRP MET ALA LEU GLU CYS ILE HIS TYR ARG LYS SEQRES 16 A 328 PHE THR HIS GLN SER ASP VAL TRP SER TYR GLY VAL THR SEQRES 17 A 328 ILE TRP GLU LEU MET THR PHE GLY GLY LYS PRO TYR ASP SEQRES 18 A 328 GLY ILE PRO THR ARG GLU ILE PRO ASP LEU LEU GLU LYS SEQRES 19 A 328 GLY GLU ARG LEU PRO GLN PRO PRO ILE CYS THR ILE ASP SEQRES 20 A 328 VAL TYR MET VAL MET VAL LYS CYS TRP MET ILE ASP ALA SEQRES 21 A 328 ASP SER ARG PRO LYS PHE LYS GLU LEU ALA ALA GLU PHE SEQRES 22 A 328 SER ARG MET ALA ARG ASP PRO GLN ARG TYR LEU VAL ILE SEQRES 23 A 328 GLN GLY ASP ASP ARG MET LYS LEU PRO SER PRO ASN ASP SEQRES 24 A 328 SER LYS PHE PHE GLN ASN LEU LEU ASP GLU GLU ASP LEU SEQRES 25 A 328 GLU ASP MET MET ASP ALA GLU GLU TYR LEU VAL PRO GLN SEQRES 26 A 328 ALA PHE ASN HELIX 1 1 ASN B 737 MET B 750 1 14 HELIX 2 2 CYS B 778 HIS B 786 1 9 HELIX 3 3 GLY B 791 ARG B 813 1 23 HELIX 4 4 GLY B 838 LEU B 843 1 6 HELIX 5 5 PRO B 858 MET B 862 5 5 HELIX 6 6 ALA B 863 ARG B 870 1 8 HELIX 7 7 THR B 873 THR B 890 1 18 HELIX 8 8 GLU B 903 GLY B 911 1 9 HELIX 9 9 THR B 921 TRP B 932 1 12 HELIX 10 10 LYS B 941 ALA B 953 1 13 HELIX 11 11 ARG B 954 TYR B 959 5 6 HELIX 12 12 ASN A 737 MET A 750 1 14 HELIX 13 13 CYS A 778 HIS A 786 1 9 HELIX 14 14 GLY A 791 ARG A 813 1 23 HELIX 15 15 GLY A 838 LEU A 843 1 6 HELIX 16 16 PRO A 858 MET A 862 5 5 HELIX 17 17 ALA A 863 ARG A 870 1 8 HELIX 18 18 THR A 873 THR A 890 1 18 HELIX 19 19 GLU A 903 GLY A 911 1 9 HELIX 20 20 THR A 921 TRP A 932 1 12 HELIX 21 21 LYS A 941 ALA A 953 1 13 HELIX 22 22 ARG A 954 TYR A 959 5 6 SHEET 1 A 6 ARG B 686 ILE B 687 0 SHEET 2 A 6 LEU B 758 CYS B 762 1 O VAL B 761 N ARG B 686 SHEET 3 A 6 GLN B 768 GLN B 772 -1 O VAL B 770 N GLY B 760 SHEET 4 A 6 ILE B 721 LEU B 728 -1 N ALA B 724 O THR B 771 SHEET 5 A 6 GLY B 705 TRP B 712 -1 N GLY B 710 O VAL B 723 SHEET 6 A 6 LEU B 693 SER B 701 -1 N GLY B 700 O VAL B 707 SHEET 1 B 2 VAL B 824 SER B 828 0 SHEET 2 B 2 HIS B 831 ILE B 834 -1 O LYS B 833 N LEU B 825 SHEET 1 C 6 ARG A 686 ILE A 687 0 SHEET 2 C 6 LEU A 758 CYS A 762 1 O VAL A 761 N ARG A 686 SHEET 3 C 6 GLN A 768 GLN A 772 -1 O VAL A 770 N GLY A 760 SHEET 4 C 6 ILE A 721 LEU A 728 -1 N ALA A 724 O THR A 771 SHEET 5 C 6 GLY A 705 TRP A 712 -1 N TYR A 708 O ILE A 725 SHEET 6 C 6 LEU A 693 SER A 701 -1 N GLY A 700 O VAL A 707 SHEET 1 D 2 VAL A 824 SER A 828 0 SHEET 2 D 2 HIS A 831 ILE A 834 -1 O HIS A 831 N SER A 828 CISPEP 1 GLY B 733 PRO B 734 0 -4.62 CISPEP 2 SER B 972 PRO B 973 0 0.35 CISPEP 3 GLY A 733 PRO A 734 0 -1.87 CRYST1 102.746 102.746 181.335 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009733 0.005619 0.000000 0.00000 SCALE2 0.000000 0.011238 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005515 0.00000