data_3BCI # _entry.id 3BCI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3BCI RCSB RCSB045351 WWPDB D_1000045351 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1dsb 'Crystal structure of the dsba protein required for disulphide bond formation in vivo' unspecified PDB 1bed 'Structure of disulfide oxidoreductase' unspecified PDB 3BCK . unspecified PDB 3BD2 . unspecified # _pdbx_database_status.entry_id 3BCI _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2007-11-12 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Heras, B.' 1 'Thony-Meyer, L.' 2 'Martin, J.L.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Staphylococcus aureus DsbA Does Not Have a Destabilizing Disulfide: A NEW PARADIGM FOR BACTERIAL OXIDATIVE FOLDING' J.Biol.Chem. 283 4261 4271 2008 JBCHA3 US 0021-9258 0071 ? 18077463 10.1074/jbc.M707838200 1 'Expression and crystallization of DsbA from Staphylococcus aureus' 'Acta Crystallogr.,Sect.F' 63 953 956 2007 ? DK 1744-3091 ? ? 18007049 10.1107/S174430910704821X # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Heras, B.' 1 primary 'Kurz, M.' 2 primary 'Jarrott, R.' 3 primary 'Shouldice, S.R.' 4 primary 'Frei, P.' 5 primary 'Robin, G.' 6 primary 'Cemazar, M.' 7 primary 'Thony-Meyer, L.' 8 primary 'Glockshuber, R.' 9 primary 'Martin, J.L.' 10 1 'Heras, B.' 11 1 'Kurz, M.' 12 1 'Jarrott, R.' 13 1 'Byriel, K.A.' 14 1 'Jones, A.' 15 1 'Thony-Meyer, L.' 16 1 'Martin, J.L.' 17 # _cell.length_a 72.099 _cell.length_b 72.099 _cell.length_c 92.098 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 3BCI _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 65' _symmetry.entry_id 3BCI _symmetry.Int_Tables_number 170 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Disulfide bond protein A' 21809.979 1 ? ? 'residues in database 24-199' ? 2 water nat water 18.015 231 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Thiol:disulfide oxidoreductase DsbA' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MASATTSSKNGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLAFLGKDSIVGSRASHAVLMYAPKSFL DFQKQLFAAQQDENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSKSWKAAEKDKKIAKDNHIKTTPTAFINGEKV EDPYDYESYEKLLKDKIKLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MASATTSSKNGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLAFLGKDSIVGSRASHAVLMYAPKSFL DFQKQLFAAQQDENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSKSWKAAEKDKKIAKDNHIKTTPTAFINGEKV EDPYDYESYEKLLKDKIKLEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 SER n 1 4 ALA n 1 5 THR n 1 6 THR n 1 7 SER n 1 8 SER n 1 9 LYS n 1 10 ASN n 1 11 GLY n 1 12 LYS n 1 13 PRO n 1 14 LEU n 1 15 VAL n 1 16 VAL n 1 17 VAL n 1 18 TYR n 1 19 GLY n 1 20 ASP n 1 21 TYR n 1 22 LYS n 1 23 CYS n 1 24 PRO n 1 25 TYR n 1 26 CYS n 1 27 LYS n 1 28 GLU n 1 29 LEU n 1 30 ASP n 1 31 GLU n 1 32 LYS n 1 33 VAL n 1 34 MET n 1 35 PRO n 1 36 LYS n 1 37 LEU n 1 38 ARG n 1 39 LYS n 1 40 ASN n 1 41 TYR n 1 42 ILE n 1 43 ASP n 1 44 ASN n 1 45 HIS n 1 46 LYS n 1 47 VAL n 1 48 GLU n 1 49 TYR n 1 50 GLN n 1 51 PHE n 1 52 VAL n 1 53 ASN n 1 54 LEU n 1 55 ALA n 1 56 PHE n 1 57 LEU n 1 58 GLY n 1 59 LYS n 1 60 ASP n 1 61 SER n 1 62 ILE n 1 63 VAL n 1 64 GLY n 1 65 SER n 1 66 ARG n 1 67 ALA n 1 68 SER n 1 69 HIS n 1 70 ALA n 1 71 VAL n 1 72 LEU n 1 73 MET n 1 74 TYR n 1 75 ALA n 1 76 PRO n 1 77 LYS n 1 78 SER n 1 79 PHE n 1 80 LEU n 1 81 ASP n 1 82 PHE n 1 83 GLN n 1 84 LYS n 1 85 GLN n 1 86 LEU n 1 87 PHE n 1 88 ALA n 1 89 ALA n 1 90 GLN n 1 91 GLN n 1 92 ASP n 1 93 GLU n 1 94 ASN n 1 95 LYS n 1 96 GLU n 1 97 TRP n 1 98 LEU n 1 99 THR n 1 100 LYS n 1 101 GLU n 1 102 LEU n 1 103 LEU n 1 104 ASP n 1 105 LYS n 1 106 HIS n 1 107 ILE n 1 108 LYS n 1 109 GLN n 1 110 LEU n 1 111 HIS n 1 112 LEU n 1 113 ASP n 1 114 LYS n 1 115 GLU n 1 116 THR n 1 117 GLU n 1 118 ASN n 1 119 LYS n 1 120 ILE n 1 121 ILE n 1 122 LYS n 1 123 ASP n 1 124 TYR n 1 125 LYS n 1 126 THR n 1 127 LYS n 1 128 ASP n 1 129 SER n 1 130 LYS n 1 131 SER n 1 132 TRP n 1 133 LYS n 1 134 ALA n 1 135 ALA n 1 136 GLU n 1 137 LYS n 1 138 ASP n 1 139 LYS n 1 140 LYS n 1 141 ILE n 1 142 ALA n 1 143 LYS n 1 144 ASP n 1 145 ASN n 1 146 HIS n 1 147 ILE n 1 148 LYS n 1 149 THR n 1 150 THR n 1 151 PRO n 1 152 THR n 1 153 ALA n 1 154 PHE n 1 155 ILE n 1 156 ASN n 1 157 GLY n 1 158 GLU n 1 159 LYS n 1 160 VAL n 1 161 GLU n 1 162 ASP n 1 163 PRO n 1 164 TYR n 1 165 ASP n 1 166 TYR n 1 167 GLU n 1 168 SER n 1 169 TYR n 1 170 GLU n 1 171 LYS n 1 172 LEU n 1 173 LEU n 1 174 LYS n 1 175 ASP n 1 176 LYS n 1 177 ILE n 1 178 LYS n 1 179 LEU n 1 180 GLU n 1 181 HIS n 1 182 HIS n 1 183 HIS n 1 184 HIS n 1 185 HIS n 1 186 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Staphylococcus _entity_src_gen.pdbx_gene_src_gene AAG41993 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain BB270 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Staphylococcus aureus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1280 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3) pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET21a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9EYL5_STAAU _struct_ref.pdbx_db_accession Q9EYL5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SATTSSKNGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLAFLGKDSIVGSRASHAVLMYAPKSFLDF QKQLFAAQQDENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSKSWKAAEKDKKIAKDNHIKTTPTAFINGEKVED PYDYESYEKLLKDKIK ; _struct_ref.pdbx_align_begin 24 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3BCI _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 178 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9EYL5 _struct_ref_seq.db_align_beg 24 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 199 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 6 _struct_ref_seq.pdbx_auth_seq_align_end 181 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3BCI MET A 1 ? UNP Q9EYL5 ? ? 'EXPRESSION TAG' 4 1 1 3BCI ALA A 2 ? UNP Q9EYL5 ? ? 'EXPRESSION TAG' 5 2 1 3BCI LEU A 179 ? UNP Q9EYL5 ? ? 'EXPRESSION TAG' 182 3 1 3BCI GLU A 180 ? UNP Q9EYL5 ? ? 'EXPRESSION TAG' 183 4 1 3BCI HIS A 181 ? UNP Q9EYL5 ? ? 'EXPRESSION TAG' 184 5 1 3BCI HIS A 182 ? UNP Q9EYL5 ? ? 'EXPRESSION TAG' 185 6 1 3BCI HIS A 183 ? UNP Q9EYL5 ? ? 'EXPRESSION TAG' 186 7 1 3BCI HIS A 184 ? UNP Q9EYL5 ? ? 'EXPRESSION TAG' 187 8 1 3BCI HIS A 185 ? UNP Q9EYL5 ? ? 'EXPRESSION TAG' 188 9 1 3BCI HIS A 186 ? UNP Q9EYL5 ? ? 'EXPRESSION TAG' 189 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3BCI _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.168319 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 65.49 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '28-30% PEG 3350, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 100 ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 'IMAGE PLATE' 'RIGAKU RAXIS IV' 2004-12-16 'Osmic Confocal Max-Flux optics' 2 CCD 'ADSC QUANTUM 210' 2005-06-09 ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.monochromator _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.pdbx_scattering_type 1 1 'SINGLE WAVELENGTH' 'Osmic Confocal MaxFlux' M x-ray 2 1 MAD 'Double flat crystal, Si(111)' M x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.54 1.0 2 0.9796 1.0 3 0.9797 1.0 4 0.95373 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline 1 'ROTATING ANODE' 'RIGAKU FR-E+ SUPERBRIGHT' ? 1.54 ? ? 2 SYNCHROTRON 'ALS BEAMLINE 8.3.1' ? '0.9796, 0.9797, 0.95373' ALS 8.3.1 # _reflns.entry_id 3BCI _reflns.d_resolution_high 1.80 _reflns.d_resolution_low 37.06 _reflns.limit_h_max 34 _reflns.limit_h_min 0 _reflns.limit_k_max 34 _reflns.limit_k_min 0 _reflns.limit_l_max 50 _reflns.limit_l_min 0 _reflns.number_all 24921 _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_F_max 460920.71 _reflns.observed_criterion_F_min 2.970000 _reflns.B_iso_Wilson_estimate 25.1 _reflns.observed_criterion_sigma_I ? _reflns.number_obs 24921 _reflns.percent_possible_obs 99.1 _reflns.pdbx_Rmerge_I_obs 0.05 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 21.9 _reflns.pdbx_redundancy 9.5 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1,2 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.8 _reflns_shell.d_res_low 1.86 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 91.6 _reflns_shell.Rmerge_I_obs 0.387 _reflns_shell.meanI_over_sigI_obs 3.3 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 3.59 _reflns_shell.number_unique_all 2272 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3BCI _refine.ls_number_reflns_all 24756 _refine.ls_number_reflns_obs 24569 _refine.ls_percent_reflns_obs 99.200 _refine.ls_d_res_high 1.810 _refine.ls_d_res_low 29.57 _refine.B_iso_min 16.26 _refine.B_iso_max 85.88 _refine.B_iso_mean 35.140 _refine.occupancy_min 0.20 _refine.occupancy_max 1.00 _refine.aniso_B[1][1] -3.827 _refine.aniso_B[2][2] -3.827 _refine.aniso_B[3][3] 7.654 _refine.aniso_B[1][2] -2.399 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_param_bsol 48.282 _refine.solvent_model_param_ksol 0.313641 _refine.solvent_model_details 'CNS bulk solvent model used' _refine.ls_R_factor_R_work 0.198 _refine.ls_R_factor_R_free 0.219 _refine.ls_R_factor_R_free_error 0.004 _refine.ls_number_reflns_R_free 2432 _refine.ls_percent_reflns_R_free 9.800 _refine.details ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_ls_sigma_I ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_isotropic_thermal_model anisotropic _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3BCI _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.pdbx_Luzzati_d_res_high_obs 1.81 _refine_analyze.Luzzati_coordinate_error_obs 0.20 _refine_analyze.Luzzati_sigma_a_obs 0.36 _refine_analyze.Luzzati_coordinate_error_free 0.24 _refine_analyze.Luzzati_sigma_a_free 0.40 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1393 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 231 _refine_hist.number_atoms_total 1624 _refine_hist.d_res_high 1.810 _refine_hist.d_res_low 29.57 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 . ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 . ? ? 'X-RAY DIFFRACTION' ? x_torsion_deg 20.9 . ? ? 'X-RAY DIFFRACTION' ? x_torsion_impr_deg 0.70 . ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.R_factor_all _refine_ls_shell.pdbx_refine_id 1.81 1.89 3089 2897 2609 93.8 0.384 0.404 0.024 288 9.9 . . . 'X-RAY DIFFRACTION' 1.89 1.99 3082 3078 2778 99.8 0.307 0.331 0.019 300 9.7 . . . 'X-RAY DIFFRACTION' 1.99 2.12 3091 3087 2796 99.9 0.240 0.280 0.016 291 9.4 . . . 'X-RAY DIFFRACTION' 2.12 2.28 3083 3082 2769 99.9 0.183 0.224 0.013 313 10.2 . . . 'X-RAY DIFFRACTION' 2.28 2.51 3089 3087 2779 99.9 0.189 0.216 0.012 308 10.0 . . . 'X-RAY DIFFRACTION' 2.51 2.87 3102 3102 2782 100.0 0.187 0.231 0.013 320 10.3 . . . 'X-RAY DIFFRACTION' 2.87 3.62 3099 3099 2791 100.0 0.185 0.211 0.012 308 9.9 . . . 'X-RAY DIFFRACTION' 3.62 29.57 3137 3137 2833 100.0 0.168 0.170 0.010 304 9.7 . . . 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 carbohydrate.param carbohydrate.top 'X-RAY DIFFRACTION' 3 water.param ? 'X-RAY DIFFRACTION' # _struct.entry_id 3BCI _struct.title 'Crystal Structure of Staphylococcus aureus DsbA' _struct.pdbx_descriptor 'Disulfide bond protein A' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3BCI _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text 'thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre, oxidoreductase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 CYS A 23 ? TYR A 41 ? CYS A 26 TYR A 44 1 ? 19 HELX_P HELX_P2 2 ASP A 60 ? ALA A 75 ? ASP A 63 ALA A 78 1 ? 16 HELX_P HELX_P3 3 SER A 78 ? ALA A 89 ? SER A 81 ALA A 92 1 ? 12 HELX_P HELX_P4 4 THR A 99 ? GLN A 109 ? THR A 102 GLN A 112 1 ? 11 HELX_P HELX_P5 5 ASP A 113 ? THR A 126 ? ASP A 116 THR A 129 1 ? 14 HELX_P HELX_P6 6 SER A 129 ? ASN A 145 ? SER A 132 ASN A 148 1 ? 17 HELX_P HELX_P7 7 ASP A 165 ? ASP A 175 ? ASP A 168 ASP A 178 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 23 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id B _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 26 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id B _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 26 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 29 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.035 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id THR _struct_mon_prot_cis.label_seq_id 150 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id THR _struct_mon_prot_cis.auth_seq_id 153 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 151 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 154 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.03 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 48 ? ASN A 53 ? GLU A 51 ASN A 56 A 2 LEU A 14 ? GLY A 19 ? LEU A 17 GLY A 22 A 3 THR A 152 ? ILE A 155 ? THR A 155 ILE A 158 A 4 GLU A 158 ? LYS A 159 ? GLU A 161 LYS A 162 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLU A 48 ? O GLU A 51 N VAL A 15 ? N VAL A 18 A 2 3 N VAL A 16 ? N VAL A 19 O PHE A 154 ? O PHE A 157 A 3 4 N ILE A 155 ? N ILE A 158 O GLU A 158 ? O GLU A 161 # _atom_sites.entry_id 3BCI _atom_sites.fract_transf_matrix[1][1] 0.013870 _atom_sites.fract_transf_matrix[1][2] 0.008008 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016015 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010858 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 4 ? ? ? A . n A 1 2 ALA 2 5 ? ? ? A . n A 1 3 SER 3 6 ? ? ? A . n A 1 4 ALA 4 7 ? ? ? A . n A 1 5 THR 5 8 ? ? ? A . n A 1 6 THR 6 9 ? ? ? A . n A 1 7 SER 7 10 ? ? ? A . n A 1 8 SER 8 11 ? ? ? A . n A 1 9 LYS 9 12 ? ? ? A . n A 1 10 ASN 10 13 ? ? ? A . n A 1 11 GLY 11 14 14 GLY GLY A . n A 1 12 LYS 12 15 15 LYS LYS A . n A 1 13 PRO 13 16 16 PRO PRO A . n A 1 14 LEU 14 17 17 LEU LEU A . n A 1 15 VAL 15 18 18 VAL VAL A . n A 1 16 VAL 16 19 19 VAL VAL A . n A 1 17 VAL 17 20 20 VAL VAL A . n A 1 18 TYR 18 21 21 TYR TYR A . n A 1 19 GLY 19 22 22 GLY GLY A . n A 1 20 ASP 20 23 23 ASP ASP A . n A 1 21 TYR 21 24 24 TYR TYR A . n A 1 22 LYS 22 25 25 LYS LYS A . n A 1 23 CYS 23 26 26 CYS CYS A . n A 1 24 PRO 24 27 27 PRO PRO A . n A 1 25 TYR 25 28 28 TYR TYR A . n A 1 26 CYS 26 29 29 CYS CYS A . n A 1 27 LYS 27 30 30 LYS LYS A . n A 1 28 GLU 28 31 31 GLU GLU A . n A 1 29 LEU 29 32 32 LEU LEU A . n A 1 30 ASP 30 33 33 ASP ASP A . n A 1 31 GLU 31 34 34 GLU GLU A . n A 1 32 LYS 32 35 35 LYS LYS A . n A 1 33 VAL 33 36 36 VAL VAL A . n A 1 34 MET 34 37 37 MET MET A . n A 1 35 PRO 35 38 38 PRO PRO A . n A 1 36 LYS 36 39 39 LYS LYS A . n A 1 37 LEU 37 40 40 LEU LEU A . n A 1 38 ARG 38 41 41 ARG ARG A . n A 1 39 LYS 39 42 42 LYS LYS A . n A 1 40 ASN 40 43 43 ASN ASN A . n A 1 41 TYR 41 44 44 TYR TYR A . n A 1 42 ILE 42 45 45 ILE ILE A . n A 1 43 ASP 43 46 46 ASP ASP A . n A 1 44 ASN 44 47 47 ASN ASN A . n A 1 45 HIS 45 48 48 HIS HIS A . n A 1 46 LYS 46 49 49 LYS LYS A . n A 1 47 VAL 47 50 50 VAL VAL A . n A 1 48 GLU 48 51 51 GLU GLU A . n A 1 49 TYR 49 52 52 TYR TYR A . n A 1 50 GLN 50 53 53 GLN GLN A . n A 1 51 PHE 51 54 54 PHE PHE A . n A 1 52 VAL 52 55 55 VAL VAL A . n A 1 53 ASN 53 56 56 ASN ASN A . n A 1 54 LEU 54 57 57 LEU LEU A . n A 1 55 ALA 55 58 58 ALA ALA A . n A 1 56 PHE 56 59 59 PHE PHE A . n A 1 57 LEU 57 60 60 LEU LEU A . n A 1 58 GLY 58 61 61 GLY GLY A . n A 1 59 LYS 59 62 62 LYS LYS A . n A 1 60 ASP 60 63 63 ASP ASP A . n A 1 61 SER 61 64 64 SER SER A . n A 1 62 ILE 62 65 65 ILE ILE A . n A 1 63 VAL 63 66 66 VAL VAL A . n A 1 64 GLY 64 67 67 GLY GLY A . n A 1 65 SER 65 68 68 SER SER A . n A 1 66 ARG 66 69 69 ARG ARG A . n A 1 67 ALA 67 70 70 ALA ALA A . n A 1 68 SER 68 71 71 SER SER A . n A 1 69 HIS 69 72 72 HIS HIS A . n A 1 70 ALA 70 73 73 ALA ALA A . n A 1 71 VAL 71 74 74 VAL VAL A . n A 1 72 LEU 72 75 75 LEU LEU A . n A 1 73 MET 73 76 76 MET MET A . n A 1 74 TYR 74 77 77 TYR TYR A . n A 1 75 ALA 75 78 78 ALA ALA A . n A 1 76 PRO 76 79 79 PRO PRO A . n A 1 77 LYS 77 80 80 LYS LYS A . n A 1 78 SER 78 81 81 SER SER A . n A 1 79 PHE 79 82 82 PHE PHE A . n A 1 80 LEU 80 83 83 LEU LEU A . n A 1 81 ASP 81 84 84 ASP ASP A . n A 1 82 PHE 82 85 85 PHE PHE A . n A 1 83 GLN 83 86 86 GLN GLN A . n A 1 84 LYS 84 87 87 LYS LYS A . n A 1 85 GLN 85 88 88 GLN GLN A . n A 1 86 LEU 86 89 89 LEU LEU A . n A 1 87 PHE 87 90 90 PHE PHE A . n A 1 88 ALA 88 91 91 ALA ALA A . n A 1 89 ALA 89 92 92 ALA ALA A . n A 1 90 GLN 90 93 93 GLN GLN A . n A 1 91 GLN 91 94 94 GLN GLN A . n A 1 92 ASP 92 95 95 ASP ASP A . n A 1 93 GLU 93 96 96 GLU GLU A . n A 1 94 ASN 94 97 97 ASN ASN A . n A 1 95 LYS 95 98 98 LYS LYS A . n A 1 96 GLU 96 99 99 GLU GLU A . n A 1 97 TRP 97 100 100 TRP TRP A . n A 1 98 LEU 98 101 101 LEU LEU A . n A 1 99 THR 99 102 102 THR THR A . n A 1 100 LYS 100 103 103 LYS LYS A . n A 1 101 GLU 101 104 104 GLU GLU A . n A 1 102 LEU 102 105 105 LEU LEU A . n A 1 103 LEU 103 106 106 LEU LEU A . n A 1 104 ASP 104 107 107 ASP ASP A . n A 1 105 LYS 105 108 108 LYS LYS A . n A 1 106 HIS 106 109 109 HIS HIS A . n A 1 107 ILE 107 110 110 ILE ILE A . n A 1 108 LYS 108 111 111 LYS LYS A . n A 1 109 GLN 109 112 112 GLN GLN A . n A 1 110 LEU 110 113 113 LEU LEU A . n A 1 111 HIS 111 114 114 HIS HIS A . n A 1 112 LEU 112 115 115 LEU LEU A . n A 1 113 ASP 113 116 116 ASP ASP A . n A 1 114 LYS 114 117 117 LYS LYS A . n A 1 115 GLU 115 118 118 GLU GLU A . n A 1 116 THR 116 119 119 THR THR A . n A 1 117 GLU 117 120 120 GLU GLU A . n A 1 118 ASN 118 121 121 ASN ASN A . n A 1 119 LYS 119 122 122 LYS LYS A . n A 1 120 ILE 120 123 123 ILE ILE A . n A 1 121 ILE 121 124 124 ILE ILE A . n A 1 122 LYS 122 125 125 LYS LYS A . n A 1 123 ASP 123 126 126 ASP ASP A . n A 1 124 TYR 124 127 127 TYR TYR A . n A 1 125 LYS 125 128 128 LYS LYS A . n A 1 126 THR 126 129 129 THR THR A . n A 1 127 LYS 127 130 130 LYS LYS A . n A 1 128 ASP 128 131 131 ASP ASP A . n A 1 129 SER 129 132 132 SER SER A . n A 1 130 LYS 130 133 133 LYS LYS A . n A 1 131 SER 131 134 134 SER SER A . n A 1 132 TRP 132 135 135 TRP TRP A . n A 1 133 LYS 133 136 136 LYS LYS A . n A 1 134 ALA 134 137 137 ALA ALA A . n A 1 135 ALA 135 138 138 ALA ALA A . n A 1 136 GLU 136 139 139 GLU GLU A . n A 1 137 LYS 137 140 140 LYS LYS A . n A 1 138 ASP 138 141 141 ASP ASP A . n A 1 139 LYS 139 142 142 LYS LYS A . n A 1 140 LYS 140 143 143 LYS LYS A . n A 1 141 ILE 141 144 144 ILE ILE A . n A 1 142 ALA 142 145 145 ALA ALA A . n A 1 143 LYS 143 146 146 LYS LYS A . n A 1 144 ASP 144 147 147 ASP ASP A . n A 1 145 ASN 145 148 148 ASN ASN A . n A 1 146 HIS 146 149 149 HIS HIS A . n A 1 147 ILE 147 150 150 ILE ILE A . n A 1 148 LYS 148 151 151 LYS LYS A . n A 1 149 THR 149 152 152 THR THR A . n A 1 150 THR 150 153 153 THR THR A . n A 1 151 PRO 151 154 154 PRO PRO A . n A 1 152 THR 152 155 155 THR THR A . n A 1 153 ALA 153 156 156 ALA ALA A . n A 1 154 PHE 154 157 157 PHE PHE A . n A 1 155 ILE 155 158 158 ILE ILE A . n A 1 156 ASN 156 159 159 ASN ASN A . n A 1 157 GLY 157 160 160 GLY GLY A . n A 1 158 GLU 158 161 161 GLU GLU A . n A 1 159 LYS 159 162 162 LYS LYS A . n A 1 160 VAL 160 163 163 VAL VAL A . n A 1 161 GLU 161 164 164 GLU GLU A . n A 1 162 ASP 162 165 165 ASP ASP A . n A 1 163 PRO 163 166 166 PRO PRO A . n A 1 164 TYR 164 167 167 TYR TYR A . n A 1 165 ASP 165 168 168 ASP ASP A . n A 1 166 TYR 166 169 169 TYR TYR A . n A 1 167 GLU 167 170 170 GLU GLU A . n A 1 168 SER 168 171 171 SER SER A . n A 1 169 TYR 169 172 172 TYR TYR A . n A 1 170 GLU 170 173 173 GLU GLU A . n A 1 171 LYS 171 174 174 LYS LYS A . n A 1 172 LEU 172 175 175 LEU LEU A . n A 1 173 LEU 173 176 176 LEU LEU A . n A 1 174 LYS 174 177 177 LYS LYS A . n A 1 175 ASP 175 178 178 ASP ASP A . n A 1 176 LYS 176 179 ? ? ? A . n A 1 177 ILE 177 180 ? ? ? A . n A 1 178 LYS 178 181 ? ? ? A . n A 1 179 LEU 179 182 ? ? ? A . n A 1 180 GLU 180 183 ? ? ? A . n A 1 181 HIS 181 184 ? ? ? A . n A 1 182 HIS 182 185 ? ? ? A . n A 1 183 HIS 183 186 ? ? ? A . n A 1 184 HIS 184 187 ? ? ? A . n A 1 185 HIS 185 188 ? ? ? A . n A 1 186 HIS 186 189 ? ? ? A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-12-11 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Version format compliance' # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.990 _diffrn_reflns.pdbx_d_res_low 50.000 _diffrn_reflns.pdbx_number_obs 19033 _diffrn_reflns.pdbx_Rmerge_I_obs 0.088 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 0.87 _diffrn_reflns.av_sigmaI_over_netI 10.50 _diffrn_reflns.pdbx_redundancy 8.20 _diffrn_reflns.pdbx_percent_possible_obs 100.00 _diffrn_reflns.number 156671 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 4.29 50.00 ? ? 0.059 ? 1.600 8.30 99.90 1 3.40 4.29 ? ? 0.063 ? 1.406 8.50 100.00 1 2.97 3.40 ? ? 0.077 ? 1.037 8.50 100.00 1 2.70 2.97 ? ? 0.097 ? 0.898 8.60 100.00 1 2.51 2.70 ? ? 0.119 ? 0.705 8.50 100.00 1 2.36 2.51 ? ? 0.143 ? 0.679 8.50 100.00 1 2.24 2.36 ? ? 0.173 ? 0.632 8.50 100.00 1 2.14 2.24 ? ? 0.205 ? 0.580 8.50 100.00 1 2.06 2.14 ? ? 0.249 ? 0.551 7.80 100.00 1 1.99 2.06 ? ? 0.315 ? 0.503 6.50 99.70 # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal d*TREK 9.1SSI 'Mar 19 2004' package 'Pflugrath, J.W.' jwp@RigakuMSC.com 'data scaling' http://www.msc.com/protein/dtrek.html ? ? 1 CNS 1.1 1998 package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 2 PDB_EXTRACT 3.004 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 3 CrystalClear . ? ? ? ? 'data collection' ? ? ? 4 d*TREK . ? ? ? ? 'data reduction' ? ? ? 5 SOLVE . ? ? ? ? phasing ? ? ? 6 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 44 ? ? -138.32 -30.13 2 1 GLN A 94 ? ? -113.15 -168.47 3 1 LYS A 151 ? ? -90.09 -61.15 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 4 ? A MET 1 2 1 Y 1 A ALA 5 ? A ALA 2 3 1 Y 1 A SER 6 ? A SER 3 4 1 Y 1 A ALA 7 ? A ALA 4 5 1 Y 1 A THR 8 ? A THR 5 6 1 Y 1 A THR 9 ? A THR 6 7 1 Y 1 A SER 10 ? A SER 7 8 1 Y 1 A SER 11 ? A SER 8 9 1 Y 1 A LYS 12 ? A LYS 9 10 1 Y 1 A ASN 13 ? A ASN 10 11 1 Y 1 A LYS 179 ? A LYS 176 12 1 Y 1 A ILE 180 ? A ILE 177 13 1 Y 1 A LYS 181 ? A LYS 178 14 1 Y 1 A LEU 182 ? A LEU 179 15 1 Y 1 A GLU 183 ? A GLU 180 16 1 Y 1 A HIS 184 ? A HIS 181 17 1 Y 1 A HIS 185 ? A HIS 182 18 1 Y 1 A HIS 186 ? A HIS 183 19 1 Y 1 A HIS 187 ? A HIS 184 20 1 Y 1 A HIS 188 ? A HIS 185 21 1 Y 1 A HIS 189 ? A HIS 186 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 1001 1001 HOH HOH A . B 2 HOH 2 1002 1002 HOH HOH A . B 2 HOH 3 1003 1003 HOH HOH A . B 2 HOH 4 1004 1004 HOH HOH A . B 2 HOH 5 1005 1005 HOH HOH A . B 2 HOH 6 1006 1006 HOH HOH A . B 2 HOH 7 1007 1007 HOH HOH A . B 2 HOH 8 1008 1008 HOH HOH A . B 2 HOH 9 1009 1009 HOH HOH A . B 2 HOH 10 1010 1010 HOH HOH A . B 2 HOH 11 1011 1011 HOH HOH A . B 2 HOH 12 1012 1012 HOH HOH A . B 2 HOH 13 1013 1013 HOH HOH A . B 2 HOH 14 1014 1014 HOH HOH A . B 2 HOH 15 1015 1015 HOH HOH A . B 2 HOH 16 1016 1016 HOH HOH A . B 2 HOH 17 1017 1017 HOH HOH A . B 2 HOH 18 1018 1018 HOH HOH A . B 2 HOH 19 1019 1019 HOH HOH A . B 2 HOH 20 1020 1020 HOH HOH A . B 2 HOH 21 1021 1021 HOH HOH A . B 2 HOH 22 1022 1022 HOH HOH A . B 2 HOH 23 1023 1023 HOH HOH A . B 2 HOH 24 1024 1024 HOH HOH A . B 2 HOH 25 1025 1025 HOH HOH A . B 2 HOH 26 1026 1026 HOH HOH A . B 2 HOH 27 1027 1027 HOH HOH A . B 2 HOH 28 1028 1028 HOH HOH A . B 2 HOH 29 1029 1029 HOH HOH A . B 2 HOH 30 1030 1030 HOH HOH A . B 2 HOH 31 1031 1031 HOH HOH A . B 2 HOH 32 1032 1032 HOH HOH A . B 2 HOH 33 1033 1033 HOH HOH A . B 2 HOH 34 1034 1034 HOH HOH A . B 2 HOH 35 1035 1035 HOH HOH A . B 2 HOH 36 1036 1036 HOH HOH A . B 2 HOH 37 1037 1037 HOH HOH A . B 2 HOH 38 1038 1038 HOH HOH A . B 2 HOH 39 1039 1039 HOH HOH A . B 2 HOH 40 1040 1040 HOH HOH A . B 2 HOH 41 1041 1041 HOH HOH A . B 2 HOH 42 1042 1042 HOH HOH A . B 2 HOH 43 1043 1043 HOH HOH A . B 2 HOH 44 1044 1044 HOH HOH A . B 2 HOH 45 1045 1045 HOH HOH A . B 2 HOH 46 1046 1046 HOH HOH A . B 2 HOH 47 1047 1047 HOH HOH A . B 2 HOH 48 1048 1048 HOH HOH A . B 2 HOH 49 1049 1049 HOH HOH A . B 2 HOH 50 1050 1050 HOH HOH A . B 2 HOH 51 1051 1051 HOH HOH A . B 2 HOH 52 1052 1052 HOH HOH A . B 2 HOH 53 1053 1053 HOH HOH A . B 2 HOH 54 1054 1054 HOH HOH A . B 2 HOH 55 1055 1055 HOH HOH A . B 2 HOH 56 1056 1056 HOH HOH A . B 2 HOH 57 1057 1057 HOH HOH A . B 2 HOH 58 1058 1058 HOH HOH A . B 2 HOH 59 1059 1059 HOH HOH A . B 2 HOH 60 1060 1060 HOH HOH A . B 2 HOH 61 1061 1061 HOH HOH A . B 2 HOH 62 1062 1062 HOH HOH A . B 2 HOH 63 1063 1063 HOH HOH A . B 2 HOH 64 1064 1064 HOH HOH A . B 2 HOH 65 1065 1065 HOH HOH A . B 2 HOH 66 1066 1066 HOH HOH A . B 2 HOH 67 1067 1067 HOH HOH A . B 2 HOH 68 1068 1068 HOH HOH A . B 2 HOH 69 1069 1069 HOH HOH A . B 2 HOH 70 1070 1070 HOH HOH A . B 2 HOH 71 1071 1071 HOH HOH A . B 2 HOH 72 1072 1072 HOH HOH A . B 2 HOH 73 1073 1073 HOH HOH A . B 2 HOH 74 1074 1074 HOH HOH A . B 2 HOH 75 1075 1075 HOH HOH A . B 2 HOH 76 1076 1076 HOH HOH A . B 2 HOH 77 1077 1077 HOH HOH A . B 2 HOH 78 1078 1078 HOH HOH A . B 2 HOH 79 1079 1079 HOH HOH A . B 2 HOH 80 1080 1080 HOH HOH A . B 2 HOH 81 1081 1081 HOH HOH A . B 2 HOH 82 1082 1082 HOH HOH A . B 2 HOH 83 1083 1083 HOH HOH A . B 2 HOH 84 1084 1084 HOH HOH A . B 2 HOH 85 1085 1085 HOH HOH A . B 2 HOH 86 1086 1086 HOH HOH A . B 2 HOH 87 1087 1087 HOH HOH A . B 2 HOH 88 1088 1088 HOH HOH A . B 2 HOH 89 1089 1089 HOH HOH A . B 2 HOH 90 1090 1090 HOH HOH A . B 2 HOH 91 1091 1091 HOH HOH A . B 2 HOH 92 1092 1092 HOH HOH A . B 2 HOH 93 1093 1093 HOH HOH A . B 2 HOH 94 1094 1094 HOH HOH A . B 2 HOH 95 1095 1095 HOH HOH A . B 2 HOH 96 1096 1096 HOH HOH A . B 2 HOH 97 1097 1097 HOH HOH A . B 2 HOH 98 1098 1098 HOH HOH A . B 2 HOH 99 1099 1099 HOH HOH A . B 2 HOH 100 1100 1100 HOH HOH A . B 2 HOH 101 1101 1101 HOH HOH A . B 2 HOH 102 1102 1102 HOH HOH A . B 2 HOH 103 1103 1103 HOH HOH A . B 2 HOH 104 1104 1104 HOH HOH A . B 2 HOH 105 1105 1105 HOH HOH A . B 2 HOH 106 1106 1106 HOH HOH A . B 2 HOH 107 1107 1107 HOH HOH A . B 2 HOH 108 1108 1108 HOH HOH A . B 2 HOH 109 1109 1109 HOH HOH A . B 2 HOH 110 1110 1110 HOH HOH A . B 2 HOH 111 1111 1111 HOH HOH A . B 2 HOH 112 1112 1112 HOH HOH A . B 2 HOH 113 1113 1113 HOH HOH A . B 2 HOH 114 1114 1114 HOH HOH A . B 2 HOH 115 1115 1115 HOH HOH A . B 2 HOH 116 1116 1116 HOH HOH A . B 2 HOH 117 1117 1117 HOH HOH A . B 2 HOH 118 1118 1118 HOH HOH A . B 2 HOH 119 1119 1119 HOH HOH A . B 2 HOH 120 1120 1120 HOH HOH A . B 2 HOH 121 1121 1121 HOH HOH A . B 2 HOH 122 1122 1122 HOH HOH A . B 2 HOH 123 1123 1123 HOH HOH A . B 2 HOH 124 1124 1124 HOH HOH A . B 2 HOH 125 1125 1125 HOH HOH A . B 2 HOH 126 1126 1126 HOH HOH A . B 2 HOH 127 1127 1127 HOH HOH A . B 2 HOH 128 1128 1128 HOH HOH A . B 2 HOH 129 1129 1129 HOH HOH A . B 2 HOH 130 1130 1130 HOH HOH A . B 2 HOH 131 1131 1131 HOH HOH A . B 2 HOH 132 1132 1132 HOH HOH A . B 2 HOH 133 1133 1133 HOH HOH A . B 2 HOH 134 1134 1134 HOH HOH A . B 2 HOH 135 1135 1135 HOH HOH A . B 2 HOH 136 1136 1136 HOH HOH A . B 2 HOH 137 1137 1137 HOH HOH A . B 2 HOH 138 1138 1138 HOH HOH A . B 2 HOH 139 1139 1139 HOH HOH A . B 2 HOH 140 1140 1140 HOH HOH A . B 2 HOH 141 1141 1141 HOH HOH A . B 2 HOH 142 1142 1142 HOH HOH A . B 2 HOH 143 1143 1143 HOH HOH A . B 2 HOH 144 1144 1144 HOH HOH A . B 2 HOH 145 1145 1145 HOH HOH A . B 2 HOH 146 1146 1146 HOH HOH A . B 2 HOH 147 1147 1147 HOH HOH A . B 2 HOH 148 1148 1148 HOH HOH A . B 2 HOH 149 1149 1149 HOH HOH A . B 2 HOH 150 1150 1150 HOH HOH A . B 2 HOH 151 1151 1151 HOH HOH A . B 2 HOH 152 1152 1152 HOH HOH A . B 2 HOH 153 1153 1153 HOH HOH A . B 2 HOH 154 1154 1154 HOH HOH A . B 2 HOH 155 1155 1155 HOH HOH A . B 2 HOH 156 1156 1156 HOH HOH A . B 2 HOH 157 1157 1157 HOH HOH A . B 2 HOH 158 1158 1158 HOH HOH A . B 2 HOH 159 1159 1159 HOH HOH A . B 2 HOH 160 1160 1160 HOH HOH A . B 2 HOH 161 1161 1161 HOH HOH A . B 2 HOH 162 1162 1162 HOH HOH A . B 2 HOH 163 1163 1163 HOH HOH A . B 2 HOH 164 1164 1164 HOH HOH A . B 2 HOH 165 1165 1165 HOH HOH A . B 2 HOH 166 1166 1166 HOH HOH A . B 2 HOH 167 1167 1167 HOH HOH A . B 2 HOH 168 1168 1168 HOH HOH A . B 2 HOH 169 1169 1169 HOH HOH A . B 2 HOH 170 1170 1170 HOH HOH A . B 2 HOH 171 1171 1171 HOH HOH A . B 2 HOH 172 1172 1172 HOH HOH A . B 2 HOH 173 1173 1173 HOH HOH A . B 2 HOH 174 1174 1174 HOH HOH A . B 2 HOH 175 1175 1175 HOH HOH A . B 2 HOH 176 1176 1176 HOH HOH A . B 2 HOH 177 1177 1177 HOH HOH A . B 2 HOH 178 1178 1178 HOH HOH A . B 2 HOH 179 1179 1179 HOH HOH A . B 2 HOH 180 1180 1180 HOH HOH A . B 2 HOH 181 1181 1181 HOH HOH A . B 2 HOH 182 1182 1182 HOH HOH A . B 2 HOH 183 1183 1183 HOH HOH A . B 2 HOH 184 1184 1184 HOH HOH A . B 2 HOH 185 1185 1185 HOH HOH A . B 2 HOH 186 1186 1186 HOH HOH A . B 2 HOH 187 1187 1187 HOH HOH A . B 2 HOH 188 1188 1188 HOH HOH A . B 2 HOH 189 1189 1189 HOH HOH A . B 2 HOH 190 1190 1190 HOH HOH A . B 2 HOH 191 1191 1191 HOH HOH A . B 2 HOH 192 1192 1192 HOH HOH A . B 2 HOH 193 1193 1193 HOH HOH A . B 2 HOH 194 1194 1194 HOH HOH A . B 2 HOH 195 1195 1195 HOH HOH A . B 2 HOH 196 1196 1196 HOH HOH A . B 2 HOH 197 1197 1197 HOH HOH A . B 2 HOH 198 1198 1198 HOH HOH A . B 2 HOH 199 1199 1199 HOH HOH A . B 2 HOH 200 1200 1200 HOH HOH A . B 2 HOH 201 1201 1201 HOH HOH A . B 2 HOH 202 1202 1202 HOH HOH A . B 2 HOH 203 1203 1203 HOH HOH A . B 2 HOH 204 1204 1204 HOH HOH A . B 2 HOH 205 1205 1205 HOH HOH A . B 2 HOH 206 1206 1206 HOH HOH A . B 2 HOH 207 1207 1207 HOH HOH A . B 2 HOH 208 1208 1208 HOH HOH A . B 2 HOH 209 1209 1209 HOH HOH A . B 2 HOH 210 1210 1210 HOH HOH A . B 2 HOH 211 1211 1211 HOH HOH A . B 2 HOH 212 1212 1212 HOH HOH A . B 2 HOH 213 1213 1213 HOH HOH A . B 2 HOH 214 1214 1214 HOH HOH A . B 2 HOH 215 1215 1215 HOH HOH A . B 2 HOH 216 1216 1216 HOH HOH A . B 2 HOH 217 1217 1217 HOH HOH A . B 2 HOH 218 1218 1218 HOH HOH A . B 2 HOH 219 1219 1219 HOH HOH A . B 2 HOH 220 1220 1220 HOH HOH A . B 2 HOH 221 1221 1221 HOH HOH A . B 2 HOH 222 1222 1222 HOH HOH A . B 2 HOH 223 1223 1223 HOH HOH A . B 2 HOH 224 1224 1224 HOH HOH A . B 2 HOH 225 1225 1225 HOH HOH A . B 2 HOH 226 1226 1226 HOH HOH A . B 2 HOH 227 1227 1227 HOH HOH A . B 2 HOH 228 1228 1228 HOH HOH A . B 2 HOH 229 1229 1229 HOH HOH A . B 2 HOH 230 1230 1230 HOH HOH A . B 2 HOH 231 1231 1231 HOH HOH A . #