HEADER HYDROLASE 13-NOV-07 3BCP TITLE CRYSTAL STRUCTURE OF THE SWAPPED NON COVALENT FORM OF P19A/L28Q/N67D TITLE 2 BS-RNASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SEMINAL RIBONUCLEASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: SEMINAL RNASE, S-RNASE, RIBONUCLEASE BS-1; COMPND 5 EC: 3.1.27.5; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: CATTLE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 GENE: SRN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-22B(+) KEYWDS DOMAIN SWAPPING, BOVINE SEMINAL RIBONUCLEASE, NON COVALENT DIMER, KEYWDS 2 ANTITUMOR ACTIVITY, ALLOSTERIC ENZYME, ENDONUCLEASE, HYDROLASE, KEYWDS 3 SECRETED EXPDTA X-RAY DIFFRACTION AUTHOR A.MERLINO,C.ERCOLE,D.PICONE,E.PIZZO,L.MAZZARELLA,F.SICA REVDAT 5 01-NOV-23 3BCP 1 REMARK REVDAT 4 10-NOV-21 3BCP 1 SEQADV LINK REVDAT 3 16-MAR-10 3BCP 1 REMARK REVDAT 2 24-FEB-09 3BCP 1 VERSN REVDAT 1 12-FEB-08 3BCP 0 JRNL AUTH A.MERLINO,C.ERCOLE,D.PICONE,E.PIZZO,L.MAZZARELLA,F.SICA JRNL TITL THE BURIED DIVERSITY OF BOVINE SEMINAL RIBONUCLEASE: SHAPE JRNL TITL 2 AND CYTOTOXICITY OF THE SWAPPED NON-COVALENT FORM OF THE JRNL TITL 3 ENZYME JRNL REF J.MOL.BIOL. V. 376 427 2008 JRNL REFN ISSN 0022-2836 JRNL PMID 18164315 JRNL DOI 10.1016/J.JMB.2007.11.008 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH F.SICA,A.DI FIORE,A.MERLINO,L.MAZZARELLA REMARK 1 TITL STRUCTURE AND STABILITY OF THE NON-COVALENT SWAPPED DIMER OF REMARK 1 TITL 2 BOVINE SEMINAL RIBONUCLEASE: AN ENZYME TAILORED TO EVADE REMARK 1 TITL 3 RIBONUCLEASE PROTEIN INHIBITOR REMARK 1 REF J.BIOL.CHEM. V. 279 36753 2004 REMARK 1 REFN ISSN 0021-9258 REMARK 1 PMID 15192098 REMARK 1 DOI 10.1074/JBC.M405655200 REMARK 1 REFERENCE 2 REMARK 1 AUTH A.MERLINO,L.VITAGLIANO,F.SICA,A.ZAGARI,L.MAZZARELLA REMARK 1 TITL POPULATION SHIFT VS INDUCED FIT: THE CASE OF BOVINE SEMINAL REMARK 1 TITL 2 RIBONUCLEASE SWAPPING DIMER REMARK 1 REF BIOPOLYMERS V. 73 689 2004 REMARK 1 REFN ISSN 0006-3525 REMARK 1 PMID 15048772 REMARK 1 DOI 10.1002/BIP.20016 REMARK 1 REFERENCE 3 REMARK 1 AUTH L.MAZZARELLA,S.CAPASSO,D.DEMASI,G.DI LORENZO,C.A.MATTIA, REMARK 1 AUTH 2 A.ZAGARI REMARK 1 TITL BOVINE SEMINAL RIBONUCLEASE: STRUCTURE AT 1.9 A RESOLUTION REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 49 389 1993 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 15299514 REMARK 1 DOI 10.1107/S0907444993003403 REMARK 1 REFERENCE 4 REMARK 1 AUTH F.SICA,A.DI FIORE,A.ZAGARI,L.MAZZARELLA REMARK 1 TITL THE UNSWAPPED CHAIN OF BOVINE SEMINAL RIBONUCLEASE: CRYSTAL REMARK 1 TITL 2 STRUCTURE OF THE FREE AND LIGANDED MONOMERIC DERIVATIVE REMARK 1 REF PROTEINS V. 52 263 2003 REMARK 1 REFN ISSN 0887-3585 REMARK 1 PMID 12833549 REMARK 1 DOI 10.1002/PROT.10407 REMARK 1 REFERENCE 5 REMARK 1 AUTH L.VITAGLIANO,S.ADINOLFI,F.SICA,A.MERLINO,A.ZAGARI, REMARK 1 AUTH 2 L.MAZZARELLA REMARK 1 TITL A POTENTIAL ALLOSTERIC SUBSITE GENERATED BY DOMAIN SWAPPING REMARK 1 TITL 2 IN BOVINE SEMINAL RIBONUCLEASE REMARK 1 REF J.MOL.BIOL. V. 293 569 1999 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 10543951 REMARK 1 DOI 10.1006/JMBI.1999.3158 REMARK 1 REFERENCE 6 REMARK 1 AUTH L.VITAGLIANO,S.ADINOLFI,A.RICCIO,F.SICA,A.ZAGARI, REMARK 1 AUTH 2 L.MAZZARELLA REMARK 1 TITL BINDING OF A SUBSTRATE ANALOG TO A DOMAIN SWAPPING PROTEIN: REMARK 1 TITL 2 X-RAY STRUCTURE OF THE COMPLEX OF BOVINE SEMINAL REMARK 1 TITL 3 RIBONUCLEASE WITH URIDYLYL(2',5')ADENOSINE REMARK 1 REF PROTEIN SCI. V. 7 1691 1998 REMARK 1 REFN ISSN 0961-8368 REMARK 1 PMID 10082366 REMARK 2 REMARK 2 RESOLUTION. 2.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 4.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 11094 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.238 REMARK 3 FREE R VALUE : 0.323 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1166 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3792 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 62 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.500 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 28.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.600 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NON CRYSTALLOGRAPHIC SYMMETRY REMARK 3 RESTRAINTS WERE USED DURING THE REFINEMENT. THE STRUCTURE HAS REMARK 3 BEEN REFINED USING DATA UP TO 2.57 A RESOLUTION. THESE DATA ARE REMARK 3 CHARACTERIZED BY A BETTER I/SIGMA(I) VALUE (4.2) AND BY A BETTER REMARK 3 VALUE OF RSYM (28.0 %) OF THE HIGHEST RESOLUTION SHELL (2.64- REMARK 3 2.57). REMARK 4 REMARK 4 3BCP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-NOV-07. REMARK 100 THE DEPOSITION ID IS D_1000045357. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-OCT-05 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ELETTRA REMARK 200 BEAMLINE : 5.2R REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17849 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.470 REMARK 200 RESOLUTION RANGE LOW (A) : 28.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1R5D REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 27% W/V PEG 8000, 0.1M SODIUM REMARK 280 PHOSPHATE, 0.2M CALCIUM CHLORIDE, 0.1M CACODILATE PH 5.3-5.9, PH REMARK 280 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.36100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.58300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.20200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.58300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.36100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.20200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3350 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3380 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10620 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 14 67.58 -151.67 REMARK 500 ASN A 17 104.41 -31.16 REMARK 500 ALA A 19 17.25 -159.39 REMARK 500 GLN A 60 -144.92 -81.70 REMARK 500 ASP A 67 -81.35 -67.19 REMARK 500 ASN A 71 -126.92 -65.91 REMARK 500 CYS A 72 150.15 59.12 REMARK 500 ASN A 94 76.20 -106.89 REMARK 500 ALA A 122 -162.18 -179.35 REMARK 500 ASP B 14 72.93 -166.93 REMARK 500 ASN B 17 63.52 25.92 REMARK 500 ALA B 19 -13.39 141.39 REMARK 500 ARG B 33 38.32 -83.34 REMARK 500 LYS B 34 69.78 25.64 REMARK 500 GLN B 60 -151.98 -94.72 REMARK 500 LYS B 66 25.97 -66.30 REMARK 500 ASP B 67 -89.60 -106.31 REMARK 500 ASN B 71 9.46 173.20 REMARK 500 ASN B 94 75.00 -108.66 REMARK 500 ALA B 122 -173.20 177.13 REMARK 500 ASP C 14 88.69 -161.94 REMARK 500 ASN C 17 150.66 53.50 REMARK 500 CYS C 58 -17.92 -46.72 REMARK 500 GLN C 60 -145.12 -108.46 REMARK 500 LYS C 66 -13.21 -45.16 REMARK 500 ASP C 67 -110.09 -66.97 REMARK 500 THR C 70 101.06 -46.46 REMARK 500 ASN C 71 31.30 -156.82 REMARK 500 PRO C 93 42.32 -95.74 REMARK 500 ALA C 122 -169.13 -179.18 REMARK 500 ASP D 14 72.87 -166.45 REMARK 500 ASN D 17 101.95 -44.45 REMARK 500 SER D 18 12.30 -69.27 REMARK 500 LYS D 34 33.50 76.74 REMARK 500 HIS D 48 53.69 -117.52 REMARK 500 GLN D 60 -152.20 -100.69 REMARK 500 LYS D 113 91.84 161.17 REMARK 500 SER D 115 96.78 -66.02 REMARK 500 ALA D 122 -159.11 178.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3BCM RELATED DB: PDB REMARK 900 THE SAME PROTEIN, UNSWAPPED FORM REMARK 900 RELATED ID: 3BCO RELATED DB: PDB REMARK 900 THE SAME PROTEIN, SWAPPED FORM DBREF 3BCP A 1 124 UNP P00669 RNS_BOVIN 27 150 DBREF 3BCP B 1 124 UNP P00669 RNS_BOVIN 27 150 DBREF 3BCP C 1 124 UNP P00669 RNS_BOVIN 27 150 DBREF 3BCP D 1 124 UNP P00669 RNS_BOVIN 27 150 SEQADV 3BCP ALA A 19 UNP P00669 PRO 45 ENGINEERED MUTATION SEQADV 3BCP GLN A 28 UNP P00669 LEU 54 ENGINEERED MUTATION SEQADV 3BCP ASP A 67 UNP P00669 ASN 93 ENGINEERED MUTATION SEQADV 3BCP ALA B 19 UNP P00669 PRO 45 ENGINEERED MUTATION SEQADV 3BCP GLN B 28 UNP P00669 LEU 54 ENGINEERED MUTATION SEQADV 3BCP ASP B 67 UNP P00669 ASN 93 ENGINEERED MUTATION SEQADV 3BCP ALA C 19 UNP P00669 PRO 45 ENGINEERED MUTATION SEQADV 3BCP GLN C 28 UNP P00669 LEU 54 ENGINEERED MUTATION SEQADV 3BCP ASP C 67 UNP P00669 ASN 93 ENGINEERED MUTATION SEQADV 3BCP ALA D 19 UNP P00669 PRO 45 ENGINEERED MUTATION SEQADV 3BCP GLN D 28 UNP P00669 LEU 54 ENGINEERED MUTATION SEQADV 3BCP ASP D 67 UNP P00669 ASN 93 ENGINEERED MUTATION SEQRES 1 A 124 LYS GLU SER ALA ALA ALA LYS PHE GLU ARG GLN HIS MET SEQRES 2 A 124 ASP SER GLY ASN SER ALA SER SER SER SER ASN TYR CYS SEQRES 3 A 124 ASN GLN MET MET YCM YCM ARG LYS MET THR GLN GLY LYS SEQRES 4 A 124 CYS LYS PRO VAL ASN THR PHE VAL HIS GLU SER LEU ALA SEQRES 5 A 124 ASP VAL LYS ALA VAL CYS SER GLN LYS LYS VAL THR CYS SEQRES 6 A 124 LYS ASP GLY GLN THR ASN CYS TYR GLN SER LYS SER THR SEQRES 7 A 124 MET ARG ILE THR ASP CYS ARG GLU THR GLY SER SER LYS SEQRES 8 A 124 TYR PRO ASN CYS ALA TYR LYS THR THR GLN VAL GLU LYS SEQRES 9 A 124 HIS ILE ILE VAL ALA CYS GLY GLY LYS PRO SER VAL PRO SEQRES 10 A 124 VAL HIS PHE ASP ALA SER VAL SEQRES 1 B 124 LYS GLU SER ALA ALA ALA LYS PHE GLU ARG GLN HIS MET SEQRES 2 B 124 ASP SER GLY ASN SER ALA SER SER SER SER ASN TYR CYS SEQRES 3 B 124 ASN GLN MET MET YCM YCM ARG LYS MET THR GLN GLY LYS SEQRES 4 B 124 CYS LYS PRO VAL ASN THR PHE VAL HIS GLU SER LEU ALA SEQRES 5 B 124 ASP VAL LYS ALA VAL CYS SER GLN LYS LYS VAL THR CYS SEQRES 6 B 124 LYS ASP GLY GLN THR ASN CYS TYR GLN SER LYS SER THR SEQRES 7 B 124 MET ARG ILE THR ASP CYS ARG GLU THR GLY SER SER LYS SEQRES 8 B 124 TYR PRO ASN CYS ALA TYR LYS THR THR GLN VAL GLU LYS SEQRES 9 B 124 HIS ILE ILE VAL ALA CYS GLY GLY LYS PRO SER VAL PRO SEQRES 10 B 124 VAL HIS PHE ASP ALA SER VAL SEQRES 1 C 124 LYS GLU SER ALA ALA ALA LYS PHE GLU ARG GLN HIS MET SEQRES 2 C 124 ASP SER GLY ASN SER ALA SER SER SER SER ASN TYR CYS SEQRES 3 C 124 ASN GLN MET MET YCM YCM ARG LYS MET THR GLN GLY LYS SEQRES 4 C 124 CYS LYS PRO VAL ASN THR PHE VAL HIS GLU SER LEU ALA SEQRES 5 C 124 ASP VAL LYS ALA VAL CYS SER GLN LYS LYS VAL THR CYS SEQRES 6 C 124 LYS ASP GLY GLN THR ASN CYS TYR GLN SER LYS SER THR SEQRES 7 C 124 MET ARG ILE THR ASP CYS ARG GLU THR GLY SER SER LYS SEQRES 8 C 124 TYR PRO ASN CYS ALA TYR LYS THR THR GLN VAL GLU LYS SEQRES 9 C 124 HIS ILE ILE VAL ALA CYS GLY GLY LYS PRO SER VAL PRO SEQRES 10 C 124 VAL HIS PHE ASP ALA SER VAL SEQRES 1 D 124 LYS GLU SER ALA ALA ALA LYS PHE GLU ARG GLN HIS MET SEQRES 2 D 124 ASP SER GLY ASN SER ALA SER SER SER SER ASN TYR CYS SEQRES 3 D 124 ASN GLN MET MET YCM YCM ARG LYS MET THR GLN GLY LYS SEQRES 4 D 124 CYS LYS PRO VAL ASN THR PHE VAL HIS GLU SER LEU ALA SEQRES 5 D 124 ASP VAL LYS ALA VAL CYS SER GLN LYS LYS VAL THR CYS SEQRES 6 D 124 LYS ASP GLY GLN THR ASN CYS TYR GLN SER LYS SER THR SEQRES 7 D 124 MET ARG ILE THR ASP CYS ARG GLU THR GLY SER SER LYS SEQRES 8 D 124 TYR PRO ASN CYS ALA TYR LYS THR THR GLN VAL GLU LYS SEQRES 9 D 124 HIS ILE ILE VAL ALA CYS GLY GLY LYS PRO SER VAL PRO SEQRES 10 D 124 VAL HIS PHE ASP ALA SER VAL MODRES 3BCP YCM A 31 CYS S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE MODRES 3BCP YCM A 32 CYS S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE MODRES 3BCP YCM B 31 CYS S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE MODRES 3BCP YCM B 32 CYS S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE MODRES 3BCP YCM C 31 CYS S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE MODRES 3BCP YCM C 32 CYS S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE MODRES 3BCP YCM D 31 CYS S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE MODRES 3BCP YCM D 32 CYS S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE HET YCM A 31 10 HET YCM A 32 10 HET YCM B 31 10 HET YCM B 32 10 HET YCM C 31 10 HET YCM C 32 10 HET YCM D 31 10 HET YCM D 32 10 HETNAM YCM S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE HETSYN YCM CYSTEINE-S-ACETAMIDE FORMUL 1 YCM 8(C5 H10 N2 O3 S) FORMUL 5 HOH *62(H2 O) HELIX 1 1 SER A 3 MET A 13 1 11 HELIX 2 2 ASN A 24 ARG A 33 1 10 HELIX 3 3 SER A 50 CYS A 58 1 9 HELIX 4 4 SER B 3 MET B 13 1 11 HELIX 5 5 ALA B 19 SER B 23 5 5 HELIX 6 6 ASN B 24 ARG B 33 1 10 HELIX 7 7 SER B 50 VAL B 57 1 8 HELIX 8 8 CYS B 58 GLN B 60 5 3 HELIX 9 9 SER C 3 MET C 13 1 11 HELIX 10 10 ALA C 19 SER C 23 5 5 HELIX 11 11 ASN C 24 ARG C 33 1 10 HELIX 12 12 SER C 50 CYS C 58 1 9 HELIX 13 13 SER D 3 MET D 13 1 11 HELIX 14 14 ALA D 19 SER D 23 5 5 HELIX 15 15 ASN D 24 ARG D 33 1 10 HELIX 16 16 SER D 50 ALA D 56 1 7 HELIX 17 17 VAL D 57 GLN D 60 5 4 SHEET 1 A 5 VAL A 43 VAL A 47 0 SHEET 2 A 5 MET A 79 GLU A 86 -1 O CYS A 84 N ASN A 44 SHEET 3 A 5 TYR A 97 GLY A 111 -1 O THR A 100 N ASP A 83 SHEET 4 A 5 TYR A 73 GLN A 74 -1 N TYR A 73 O VAL A 108 SHEET 5 A 5 LYS A 61 LYS A 62 -1 N LYS A 61 O GLN A 74 SHEET 1 B 4 VAL A 43 VAL A 47 0 SHEET 2 B 4 MET A 79 GLU A 86 -1 O CYS A 84 N ASN A 44 SHEET 3 B 4 TYR A 97 GLY A 111 -1 O THR A 100 N ASP A 83 SHEET 4 B 4 VAL A 116 VAL A 124 -1 O VAL A 118 N ALA A 109 SHEET 1 C 5 VAL B 43 VAL B 47 0 SHEET 2 C 5 MET B 79 GLU B 86 -1 O CYS B 84 N ASN B 44 SHEET 3 C 5 TYR B 97 GLY B 111 -1 O THR B 100 N ASP B 83 SHEET 4 C 5 CYS B 72 GLN B 74 -1 N TYR B 73 O VAL B 108 SHEET 5 C 5 LYS B 61 VAL B 63 -1 N VAL B 63 O CYS B 72 SHEET 1 D 4 VAL B 43 VAL B 47 0 SHEET 2 D 4 MET B 79 GLU B 86 -1 O CYS B 84 N ASN B 44 SHEET 3 D 4 TYR B 97 GLY B 111 -1 O THR B 100 N ASP B 83 SHEET 4 D 4 VAL B 116 VAL B 124 -1 O VAL B 118 N ALA B 109 SHEET 1 E 5 VAL C 43 VAL C 47 0 SHEET 2 E 5 MET C 79 GLU C 86 -1 O THR C 82 N PHE C 46 SHEET 3 E 5 TYR C 97 GLY C 111 -1 O THR C 100 N ASP C 83 SHEET 4 E 5 CYS C 72 GLN C 74 -1 N TYR C 73 O VAL C 108 SHEET 5 E 5 LYS C 61 VAL C 63 -1 N LYS C 61 O GLN C 74 SHEET 1 F 4 VAL C 43 VAL C 47 0 SHEET 2 F 4 MET C 79 GLU C 86 -1 O THR C 82 N PHE C 46 SHEET 3 F 4 TYR C 97 GLY C 111 -1 O THR C 100 N ASP C 83 SHEET 4 F 4 VAL C 116 VAL C 124 -1 O VAL C 118 N ALA C 109 SHEET 1 G 3 VAL D 43 VAL D 47 0 SHEET 2 G 3 MET D 79 GLU D 86 -1 O CYS D 84 N ASN D 44 SHEET 3 G 3 TYR D 97 LYS D 104 -1 O THR D 100 N ASP D 83 SHEET 1 H 3 CYS D 72 GLN D 74 0 SHEET 2 H 3 ILE D 106 CYS D 110 -1 O VAL D 108 N TYR D 73 SHEET 3 H 3 PRO D 117 SER D 123 -1 O VAL D 118 N ALA D 109 SSBOND 1 CYS A 26 CYS A 84 1555 1555 2.02 SSBOND 2 CYS A 40 CYS A 95 1555 1555 2.04 SSBOND 3 CYS A 58 CYS A 110 1555 1555 2.02 SSBOND 4 CYS A 65 CYS A 72 1555 1555 2.03 SSBOND 5 CYS B 26 CYS B 84 1555 1555 2.03 SSBOND 6 CYS B 40 CYS B 95 1555 1555 2.03 SSBOND 7 CYS B 58 CYS B 110 1555 1555 2.03 SSBOND 8 CYS B 65 CYS B 72 1555 1555 2.03 SSBOND 9 CYS C 26 CYS C 84 1555 1555 2.03 SSBOND 10 CYS C 40 CYS C 95 1555 1555 2.03 SSBOND 11 CYS C 58 CYS C 110 1555 1555 2.03 SSBOND 12 CYS C 65 CYS C 72 1555 1555 2.03 SSBOND 13 CYS D 26 CYS D 84 1555 1555 2.03 SSBOND 14 CYS D 40 CYS D 95 1555 1555 2.03 SSBOND 15 CYS D 58 CYS D 110 1555 1555 2.03 SSBOND 16 CYS D 65 CYS D 72 1555 1555 2.04 LINK C MET A 30 N YCM A 31 1555 1555 1.33 LINK C YCM A 31 N YCM A 32 1555 1555 1.34 LINK C YCM A 32 N ARG A 33 1555 1555 1.33 LINK C MET B 30 N YCM B 31 1555 1555 1.33 LINK C YCM B 31 N YCM B 32 1555 1555 1.33 LINK C YCM B 32 N ARG B 33 1555 1555 1.34 LINK C MET C 30 N YCM C 31 1555 1555 1.33 LINK C YCM C 31 N YCM C 32 1555 1555 1.33 LINK C YCM C 32 N ARG C 33 1555 1555 1.33 LINK C MET D 30 N YCM D 31 1555 1555 1.33 LINK C YCM D 31 N YCM D 32 1555 1555 1.34 LINK C YCM D 32 N ARG D 33 1555 1555 1.32 CISPEP 1 TYR A 92 PRO A 93 0 0.55 CISPEP 2 LYS A 113 PRO A 114 0 -0.23 CISPEP 3 TYR B 92 PRO B 93 0 -0.16 CISPEP 4 LYS B 113 PRO B 114 0 -0.36 CISPEP 5 TYR C 92 PRO C 93 0 -0.58 CISPEP 6 LYS C 113 PRO C 114 0 -0.28 CISPEP 7 TYR D 92 PRO D 93 0 0.35 CISPEP 8 LYS D 113 PRO D 114 0 0.08 CRYST1 58.722 86.404 99.166 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017029 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011574 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010084 0.00000