HEADER UNKNOWN FUNCTION 13-NOV-07 3BCW TITLE CRYSTAL STRUCTURE OF A DUF861 FAMILY PROTEIN WITH A RMLC-LIKE CUPIN TITLE 2 FOLD (BB1179) FROM BORDETELLA BRONCHISEPTICA RB50 AT 1.60 A TITLE 3 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BORDETELLA BRONCHISEPTICA RB50; SOURCE 3 ORGANISM_TAXID: 257310; SOURCE 4 STRAIN: RB50, NCTC 13252; SOURCE 5 ATCC: BAA-588; SOURCE 6 GENE: NP_887725.1, BB1179; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, PSI-2, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 7 25-JAN-23 3BCW 1 REMARK SEQADV REVDAT 6 24-JUL-19 3BCW 1 REMARK LINK REVDAT 5 25-OCT-17 3BCW 1 REMARK REVDAT 4 13-JUL-11 3BCW 1 VERSN REVDAT 3 23-MAR-11 3BCW 1 HEADER TITLE KEYWDS REVDAT 2 24-FEB-09 3BCW 1 VERSN REVDAT 1 27-NOV-07 3BCW 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF DOMAIN OF UNKNOWN FUNCTION WITH A JRNL TITL 2 RMLC-LIKE CUPIN FOLD (NP_887725.1) FROM BORDETELLA JRNL TITL 3 BRONCHISEPTICA AT 1.60 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.61 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 36750 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1826 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2512 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.52 REMARK 3 BIN R VALUE (WORKING SET) : 0.2490 REMARK 3 BIN FREE R VALUE SET COUNT : 121 REMARK 3 BIN FREE R VALUE : 0.3260 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1808 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 43 REMARK 3 SOLVENT ATOMS : 338 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 19.06 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.73000 REMARK 3 B22 (A**2) : 0.29000 REMARK 3 B33 (A**2) : -1.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.082 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.085 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.057 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.240 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2030 ; 0.016 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1389 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2773 ; 1.708 ; 1.940 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3386 ; 1.411 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 278 ; 4.672 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 92 ;27.445 ;23.261 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 316 ; 9.937 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;11.309 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 303 ; 0.103 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2321 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 429 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 283 ; 0.177 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1429 ; 0.166 ; 0.300 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 928 ; 0.167 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): 1076 ; 0.082 ; 0.500 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 397 ; 0.167 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 4 ; 0.072 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): 48 ; 0.249 ; 0.300 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 33 ; 0.235 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1365 ; 1.812 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 512 ; 0.493 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2033 ; 2.300 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 868 ; 3.708 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 720 ; 5.121 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 121 REMARK 3 ORIGIN FOR THE GROUP (A): 11.7435 52.2835 11.3122 REMARK 3 T TENSOR REMARK 3 T11: -0.0263 T22: -0.0421 REMARK 3 T33: -0.0235 T12: -0.0073 REMARK 3 T13: -0.0050 T23: -0.0149 REMARK 3 L TENSOR REMARK 3 L11: 0.6354 L22: 0.4178 REMARK 3 L33: 1.3834 L12: -0.1452 REMARK 3 L13: 0.3358 L23: 0.0931 REMARK 3 S TENSOR REMARK 3 S11: -0.0267 S12: -0.0523 S13: 0.0937 REMARK 3 S21: 0.0720 S22: -0.0382 S23: -0.0222 REMARK 3 S31: -0.1205 S32: 0.0306 S33: 0.0649 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 121 REMARK 3 ORIGIN FOR THE GROUP (A): 2.3542 55.8289 -6.8885 REMARK 3 T TENSOR REMARK 3 T11: -0.0202 T22: -0.0421 REMARK 3 T33: -0.0129 T12: 0.0042 REMARK 3 T13: -0.0005 T23: 0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.7270 L22: 0.2597 REMARK 3 L33: 1.3582 L12: 0.0781 REMARK 3 L13: 0.2381 L23: -0.4253 REMARK 3 S TENSOR REMARK 3 S11: -0.0309 S12: 0.0294 S13: 0.1185 REMARK 3 S21: -0.0069 S22: -0.0276 S23: 0.0123 REMARK 3 S31: -0.1264 S32: -0.0692 S33: 0.0585 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY REMARK 3 OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO REMARK 3 PARTIAL S-MET INCORPORATION. REMARK 3 3. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. REMARK 3 4. 1,2-ETHANEDIOL FROM THE CRYOPROTECTANT AND AN ACETATE REMARK 3 ION AND A PEG MOLECULE FROM THE CRYSTALLIZATION SOLUTION REMARK 3 HAVE BEEN MODELED IN THE SOLVENT STRUCTURE. REMARK 4 REMARK 4 3BCW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-NOV-07. REMARK 100 THE DEPOSITION ID IS D_1000045363. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-OCT-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97939 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 OPTICS : ADJUSTABLE FOCUSING MIRRORS IN K REMARK 200 -B GEOMETRY REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36782 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 27.608 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 200 DATA REDUNDANCY : 2.840 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.6100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.49700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX, SHELXD, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NANODROP, 0.2M MGACETATE, 20.0% PEG REMARK 280 3350, NO BUFFER PH 7.7, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.00500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.61500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.50000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.61500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.00500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 28.50000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3290 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MSE A 1 REMARK 465 PRO A 2 REMARK 465 GLN A 3 REMARK 465 ALA A 122 REMARK 465 GLY B 0 REMARK 465 MSE B 1 REMARK 465 PRO B 2 REMARK 465 ALA B 122 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 6 CD CE NZ REMARK 470 LYS A 24 CD CE NZ REMARK 470 LYS A 47 CG CD CE NZ REMARK 470 GLN B 3 CD OE1 NE2 REMARK 470 LYS B 6 NZ REMARK 470 LYS B 24 CD CE NZ REMARK 470 GLN B 45 CD OE1 NE2 REMARK 470 LYS B 47 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 27 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 36 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ASP A 84 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ARG B 8 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 29 -67.48 -109.98 REMARK 500 THR A 64 31.51 -96.42 REMARK 500 ARG A 110 -64.29 -135.29 REMARK 500 HIS A 111 141.24 -170.36 REMARK 500 HIS A 111 143.88 -172.28 REMARK 500 ARG B 110 -62.84 -134.61 REMARK 500 HIS B 111 143.83 -172.07 REMARK 500 HIS B 111 141.91 -170.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 123 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 124 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 125 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 126 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 127 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 128 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 123 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 124 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 125 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 126 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 379020 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE FOLLOWED BY THE TARGET SEQUENCE. DBREF 3BCW A 1 122 UNP Q7WN61 Q7WN61_BORBR 1 122 DBREF 3BCW B 1 122 UNP Q7WN61 Q7WN61_BORBR 1 122 SEQADV 3BCW GLY A 0 UNP Q7WN61 EXPRESSION TAG SEQADV 3BCW GLY B 0 UNP Q7WN61 EXPRESSION TAG SEQRES 1 A 123 GLY MSE PRO GLN HIS ASP LYS SER ARG LEU VAL ARG ILE SEQRES 2 A 123 ASP THR GLY PRO MSE ILE ASN PRO VAL ALA GLY LYS PRO SEQRES 3 A 123 SER ARG PRO ILE ALA GLY ASP ALA SER PHE ARG THR VAL SEQRES 4 A 123 THR ALA PHE GLU GLY GLY GLN GLY LYS VAL GLU SER GLY SEQRES 5 A 123 VAL TRP GLU SER THR SER GLY SER PHE GLN SER ASN THR SEQRES 6 A 123 THR GLY TYR ILE GLU TYR CYS HIS ILE ILE GLU GLY GLU SEQRES 7 A 123 ALA ARG LEU VAL ASP PRO ASP GLY THR VAL HIS ALA VAL SEQRES 8 A 123 LYS ALA GLY ASP ALA PHE ILE MSE PRO GLU GLY TYR THR SEQRES 9 A 123 GLY ARG TRP GLU VAL ASP ARG HIS VAL LYS LYS ILE TYR SEQRES 10 A 123 PHE VAL THR HIS LEU ALA SEQRES 1 B 123 GLY MSE PRO GLN HIS ASP LYS SER ARG LEU VAL ARG ILE SEQRES 2 B 123 ASP THR GLY PRO MSE ILE ASN PRO VAL ALA GLY LYS PRO SEQRES 3 B 123 SER ARG PRO ILE ALA GLY ASP ALA SER PHE ARG THR VAL SEQRES 4 B 123 THR ALA PHE GLU GLY GLY GLN GLY LYS VAL GLU SER GLY SEQRES 5 B 123 VAL TRP GLU SER THR SER GLY SER PHE GLN SER ASN THR SEQRES 6 B 123 THR GLY TYR ILE GLU TYR CYS HIS ILE ILE GLU GLY GLU SEQRES 7 B 123 ALA ARG LEU VAL ASP PRO ASP GLY THR VAL HIS ALA VAL SEQRES 8 B 123 LYS ALA GLY ASP ALA PHE ILE MSE PRO GLU GLY TYR THR SEQRES 9 B 123 GLY ARG TRP GLU VAL ASP ARG HIS VAL LYS LYS ILE TYR SEQRES 10 B 123 PHE VAL THR HIS LEU ALA MODRES 3BCW MSE A 17 MET SELENOMETHIONINE MODRES 3BCW MSE A 98 MET SELENOMETHIONINE MODRES 3BCW MSE B 17 MET SELENOMETHIONINE MODRES 3BCW MSE B 98 MET SELENOMETHIONINE HET MSE A 17 8 HET MSE A 98 8 HET MSE B 17 8 HET MSE B 98 8 HET ACT A 123 4 HET EDO A 124 4 HET EDO A 125 4 HET EDO A 126 4 HET EDO A 127 4 HET EDO A 128 4 HET EDO B 123 4 HET EDO B 124 4 HET EDO B 125 4 HET PEG B 126 7 HETNAM MSE SELENOMETHIONINE HETNAM ACT ACETATE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 ACT C2 H3 O2 1- FORMUL 4 EDO 8(C2 H6 O2) FORMUL 12 PEG C4 H10 O3 FORMUL 13 HOH *338(H2 O) SHEET 1 A 6 VAL A 10 ARG A 11 0 SHEET 2 A 6 ALA B 95 MSE B 98 -1 O ILE B 97 N VAL A 10 SHEET 3 A 6 TYR B 67 VAL B 81 -1 N CYS B 71 O PHE B 96 SHEET 4 A 6 ARG B 105 HIS B 120 -1 O PHE B 117 N TYR B 70 SHEET 5 A 6 VAL B 48 GLN B 61 -1 N GLY B 58 O VAL B 108 SHEET 6 A 6 PRO B 28 ALA B 30 -1 N ALA B 30 O SER B 59 SHEET 1 B 6 VAL B 21 GLY B 23 0 SHEET 2 B 6 PHE B 35 GLY B 43 -1 O THR B 37 N VAL B 21 SHEET 3 B 6 VAL B 48 GLN B 61 -1 O SER B 50 N ALA B 40 SHEET 4 B 6 ARG B 105 HIS B 120 -1 O VAL B 108 N GLY B 58 SHEET 5 B 6 TYR B 67 VAL B 81 -1 N TYR B 70 O PHE B 117 SHEET 6 B 6 VAL B 87 LYS B 91 -1 O VAL B 90 N ALA B 78 SHEET 1 C 6 VAL A 21 GLY A 23 0 SHEET 2 C 6 PHE A 35 GLY A 43 -1 O PHE A 35 N GLY A 23 SHEET 3 C 6 VAL A 48 GLN A 61 -1 O SER A 50 N ALA A 40 SHEET 4 C 6 ARG A 105 HIS A 120 -1 O VAL A 108 N GLY A 58 SHEET 5 C 6 TYR A 67 VAL A 81 -1 N TYR A 70 O PHE A 117 SHEET 6 C 6 VAL A 87 LYS A 91 -1 O HIS A 88 N LEU A 80 SHEET 1 D 6 PRO A 28 GLY A 31 0 SHEET 2 D 6 VAL A 48 GLN A 61 -1 O SER A 59 N ALA A 30 SHEET 3 D 6 ARG A 105 HIS A 120 -1 O VAL A 108 N GLY A 58 SHEET 4 D 6 TYR A 67 VAL A 81 -1 N TYR A 70 O PHE A 117 SHEET 5 D 6 ALA A 95 MSE A 98 -1 O PHE A 96 N CYS A 71 SHEET 6 D 6 VAL B 10 ARG B 11 -1 O VAL B 10 N ILE A 97 LINK C PRO A 16 N MSE A 17 1555 1555 1.34 LINK C MSE A 17 N ILE A 18 1555 1555 1.33 LINK C ILE A 97 N MSE A 98 1555 1555 1.33 LINK C MSE A 98 N PRO A 99 1555 1555 1.35 LINK C PRO B 16 N MSE B 17 1555 1555 1.34 LINK C MSE B 17 N ILE B 18 1555 1555 1.33 LINK C ILE B 97 N MSE B 98 1555 1555 1.33 LINK C MSE B 98 N PRO B 99 1555 1555 1.37 SITE 1 AC1 1 SER A 62 SITE 1 AC2 3 ARG A 11 ASP A 13 HOH A 241 SITE 1 AC3 5 GLY A 23 SER A 34 ARG A 36 HOH A 251 SITE 2 AC3 5 HOH B 232 SITE 1 AC4 4 ARG A 79 GLU A 107 VAL A 108 ASP A 109 SITE 1 AC5 3 TYR A 67 HIS A 120 HOH A 286 SITE 1 AC6 3 THR A 39 GLU A 42 HOH A 142 SITE 1 AC7 2 ARG A 8 THR B 86 SITE 1 AC8 5 TRP B 53 GLU B 69 LYS B 114 EDO B 125 SITE 2 AC8 5 HOH B 208 SITE 1 AC9 5 GLU B 49 TYR B 67 VAL B 118 HIS B 120 SITE 2 AC9 5 EDO B 124 SITE 1 BC1 6 ARG B 79 GLU B 107 VAL B 108 ASP B 109 SITE 2 BC1 6 HOH B 255 HOH B 261 CRYST1 48.010 57.000 101.230 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020829 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017544 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009878 0.00000