HEADER UNKNOWN FUNCTION 14-NOV-07 3BDE TITLE CRYSTAL STRUCTURE OF A DABB FAMILY PROTEIN WITH A FERREDOXIN-LIKE FOLD TITLE 2 (MLL5499) FROM MESORHIZOBIUM LOTI MAFF303099 AT 1.79 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: MLL5499 PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MESORHIZOBIUM LOTI; SOURCE 3 ORGANISM_TAXID: 266835; SOURCE 4 STRAIN: MAFF303099; SOURCE 5 GENE: NP_106155.1, MLL5499; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS STRESS RESPONSIVE A/B BARREL DOMAIN, STRUCTURAL GENOMICS, JOINT KEYWDS 2 CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, KEYWDS 3 PSI-2, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 7 25-JAN-23 3BDE 1 REMARK SEQADV REVDAT 6 24-JUL-19 3BDE 1 REMARK LINK REVDAT 5 25-OCT-17 3BDE 1 REMARK REVDAT 4 13-JUL-11 3BDE 1 VERSN REVDAT 3 23-MAR-11 3BDE 1 HEADER TITLE KEYWDS REVDAT 2 24-FEB-09 3BDE 1 VERSN REVDAT 1 27-NOV-07 3BDE 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF DOMAIN OF UNKNOWN FUNCTION WITH A JRNL TITL 2 FERREDOXIN-LIKE FOLD (NP_106155.1) FROM MESORHIZOBIUM LOTI JRNL TITL 3 AT 1.79 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.3.0040 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.54 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 3 NUMBER OF REFLECTIONS : 20637 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1063 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.79 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.84 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1103 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 72.38 REMARK 3 BIN R VALUE (WORKING SET) : 0.2410 REMARK 3 BIN FREE R VALUE SET COUNT : 50 REMARK 3 BIN FREE R VALUE : 0.3120 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1640 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 253 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 18.85 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.24000 REMARK 3 B22 (A**2) : 0.38000 REMARK 3 B33 (A**2) : -0.62000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.51000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.136 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.133 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.087 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.341 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1774 ; 0.014 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1257 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2379 ; 1.620 ; 1.938 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3020 ; 1.269 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 208 ; 4.245 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 91 ;34.502 ;22.747 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 289 ;10.166 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;26.582 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 252 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1930 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 397 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 302 ; 0.178 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1185 ; 0.145 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 830 ; 0.166 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 888 ; 0.075 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 207 ; 0.102 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 12 ; 0.156 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 64 ; 0.193 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 20 ; 0.093 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1142 ; 1.935 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 400 ; 0.447 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1648 ; 2.547 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 829 ; 4.360 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 725 ; 5.631 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 98 REMARK 3 ORIGIN FOR THE GROUP (A): 10.6867 8.2702 4.6276 REMARK 3 T TENSOR REMARK 3 T11: -0.0234 T22: -0.0377 REMARK 3 T33: -0.0246 T12: 0.0056 REMARK 3 T13: 0.0044 T23: 0.0097 REMARK 3 L TENSOR REMARK 3 L11: 1.1542 L22: 0.3371 REMARK 3 L33: 0.6349 L12: -0.1290 REMARK 3 L13: 0.3046 L23: -0.0801 REMARK 3 S TENSOR REMARK 3 S11: 0.0181 S12: 0.0020 S13: -0.0334 REMARK 3 S21: 0.0297 S22: -0.0094 S23: -0.0162 REMARK 3 S31: 0.0056 S32: 0.0150 S33: -0.0087 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 98 REMARK 3 ORIGIN FOR THE GROUP (A): 31.8215 0.6863 27.7820 REMARK 3 T TENSOR REMARK 3 T11: -0.0128 T22: -0.0178 REMARK 3 T33: -0.0211 T12: 0.0041 REMARK 3 T13: 0.0048 T23: 0.0126 REMARK 3 L TENSOR REMARK 3 L11: 0.6332 L22: 0.4326 REMARK 3 L33: 1.0319 L12: -0.0390 REMARK 3 L13: 0.6147 L23: -0.0896 REMARK 3 S TENSOR REMARK 3 S11: -0.0058 S12: -0.0220 S13: -0.0163 REMARK 3 S21: 0.0399 S22: 0.0235 S23: 0.0252 REMARK 3 S31: 0.0054 S32: -0.0101 S33: -0.0177 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 2. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. REMARK 3 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY REMARK 3 OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 REMARK 3 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. REMARK 3 4. RESIDUES 98-101 ARE DISORDERED AND NOT INCLUDED IN THE MODEL. REMARK 3 5. ACT AND EDO MOLECULES FROM THE CRYSTALLIZATION/CRYO SOLUTION REMARK 3 ARE MODELED. REMARK 4 REMARK 4 3BDE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-NOV-07. REMARK 100 THE DEPOSITION ID IS D_1000045381. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-OCT-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537, 0.9797, 0.9796 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : KOHZU: DOUBLE CRYSTAL SI(111) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20638 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.790 REMARK 200 RESOLUTION RANGE LOW (A) : 29.540 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 200 DATA REDUNDANCY : 2.300 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : 0.07400 REMARK 200 FOR THE DATA SET : 7.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 73.2 REMARK 200 DATA REDUNDANCY IN SHELL : 1.60 REMARK 200 R MERGE FOR SHELL (I) : 0.46500 REMARK 200 R SYM FOR SHELL (I) : 0.46500 REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHELXD, SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NANODROP, 0.2M NA ACETATE, 20.0% PEG REMARK 280 3350, NO BUFFER PH 7.9, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 59.33450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 14.20750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 59.33450 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 14.20750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: SIZE EXCLUSION CHROMATOGRAPHY WITH STATIC LIGHT SCATTERING REMARK 300 SUPPORTS THE ASSIGNMENT OF A DIMER AS A BIOLOGICALLY SIGNIFICANT REMARK 300 OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2110 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2380 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 82.78800 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 68.11200 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 157 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 208 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -18 REMARK 465 GLY A -17 REMARK 465 SER A -16 REMARK 465 ASP A -15 REMARK 465 LYS A -14 REMARK 465 ILE A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 SER A 99 REMARK 465 VAL A 100 REMARK 465 VAL A 101 REMARK 465 MSE B -18 REMARK 465 GLY B -17 REMARK 465 SER B -16 REMARK 465 ASP B -15 REMARK 465 LYS B -14 REMARK 465 ILE B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 GLU B -6 REMARK 465 ASN B -5 REMARK 465 LEU B -4 REMARK 465 TYR B -3 REMARK 465 PHE B -2 REMARK 465 GLN B -1 REMARK 465 SER B 99 REMARK 465 VAL B 100 REMARK 465 VAL B 101 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 28 CE NZ REMARK 470 ARG A 34 CZ NH1 NH2 REMARK 470 LYS A 48 CG CD CE NZ REMARK 470 GLY A 98 C O REMARK 470 LYS B 20 CE NZ REMARK 470 LYS B 28 CD CE NZ REMARK 470 ARG B 34 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG B 81 -51.55 -121.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 106 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 105 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 107 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 108 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 106 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 107 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 108 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 109 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 110 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 378291 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. DBREF 3BDE A 1 101 UNP Q98BN1 Q98BN1_RHILO 1 101 DBREF 3BDE B 1 101 UNP Q98BN1 Q98BN1_RHILO 1 101 SEQADV 3BDE MSE A -18 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE GLY A -17 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE SER A -16 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE ASP A -15 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE LYS A -14 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE ILE A -13 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE HIS A -12 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE HIS A -11 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE HIS A -10 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE HIS A -9 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE HIS A -8 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE HIS A -7 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE GLU A -6 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE ASN A -5 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE LEU A -4 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE TYR A -3 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE PHE A -2 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE GLN A -1 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE GLY A 0 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE MSE B -18 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE GLY B -17 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE SER B -16 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE ASP B -15 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE LYS B -14 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE ILE B -13 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE HIS B -12 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE HIS B -11 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE HIS B -10 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE HIS B -9 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE HIS B -8 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE HIS B -7 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE GLU B -6 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE ASN B -5 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE LEU B -4 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE TYR B -3 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE PHE B -2 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE GLN B -1 UNP Q98BN1 EXPRESSION TAG SEQADV 3BDE GLY B 0 UNP Q98BN1 EXPRESSION TAG SEQRES 1 A 120 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS GLU SEQRES 2 A 120 ASN LEU TYR PHE GLN GLY MSE ILE ARG HIS THR VAL VAL SEQRES 3 A 120 PHE THR LEU LYS HIS ALA SER HIS SER LEU GLU GLU LYS SEQRES 4 A 120 ARG PHE LEU VAL ASP ALA LYS LYS ILE LEU SER ALA ILE SEQRES 5 A 120 ARG GLY VAL THR HIS PHE GLU GLN LEU ARG GLN ILE SER SEQRES 6 A 120 PRO LYS ILE ASP TYR HIS PHE GLY PHE SER MSE GLU PHE SEQRES 7 A 120 ALA ASP GLN ALA ALA TYR THR ARG TYR ASN ASP HIS PRO SEQRES 8 A 120 ASP HIS VAL ALA PHE VAL ARG ASP ARG TRP VAL PRO GLU SEQRES 9 A 120 VAL GLU LYS PHE LEU GLU ILE ASP TYR VAL PRO LEU GLY SEQRES 10 A 120 SER VAL VAL SEQRES 1 B 120 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS GLU SEQRES 2 B 120 ASN LEU TYR PHE GLN GLY MSE ILE ARG HIS THR VAL VAL SEQRES 3 B 120 PHE THR LEU LYS HIS ALA SER HIS SER LEU GLU GLU LYS SEQRES 4 B 120 ARG PHE LEU VAL ASP ALA LYS LYS ILE LEU SER ALA ILE SEQRES 5 B 120 ARG GLY VAL THR HIS PHE GLU GLN LEU ARG GLN ILE SER SEQRES 6 B 120 PRO LYS ILE ASP TYR HIS PHE GLY PHE SER MSE GLU PHE SEQRES 7 B 120 ALA ASP GLN ALA ALA TYR THR ARG TYR ASN ASP HIS PRO SEQRES 8 B 120 ASP HIS VAL ALA PHE VAL ARG ASP ARG TRP VAL PRO GLU SEQRES 9 B 120 VAL GLU LYS PHE LEU GLU ILE ASP TYR VAL PRO LEU GLY SEQRES 10 B 120 SER VAL VAL MODRES 3BDE MSE A 1 MET SELENOMETHIONINE MODRES 3BDE MSE A 57 MET SELENOMETHIONINE MODRES 3BDE MSE B 1 MET SELENOMETHIONINE MODRES 3BDE MSE B 57 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 57 8 HET MSE B 1 8 HET MSE B 57 8 HET ACT A 102 4 HET EDO A 103 4 HET EDO A 104 4 HET EDO A 105 4 HET EDO A 106 4 HET EDO A 107 4 HET EDO A 108 4 HET EDO A 109 4 HET EDO A 110 4 HET EDO B 102 4 HET EDO B 103 4 HET EDO B 104 4 HET EDO B 105 4 HET EDO B 106 4 HET EDO B 107 4 HET EDO B 108 4 HETNAM MSE SELENOMETHIONINE HETNAM ACT ACETATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 ACT C2 H3 O2 1- FORMUL 4 EDO 15(C2 H6 O2) FORMUL 19 HOH *253(H2 O) HELIX 1 1 SER A 16 ALA A 32 1 17 HELIX 2 2 ASP A 61 ASP A 70 1 10 HELIX 3 3 HIS A 71 ARG A 81 1 11 HELIX 4 4 ARG A 81 GLU A 85 1 5 HELIX 5 5 SER B 16 ALA B 32 1 17 HELIX 6 6 ASP B 61 ASP B 70 1 10 HELIX 7 7 HIS B 71 ARG B 81 1 11 HELIX 8 8 ARG B 81 GLU B 85 1 5 SHEET 1 A 4 THR A 37 ARG A 43 0 SHEET 2 A 4 PHE A 53 PHE A 59 -1 O SER A 56 N GLU A 40 SHEET 3 A 4 ILE A 2 LEU A 10 -1 N PHE A 8 O PHE A 53 SHEET 4 A 4 VAL A 86 TYR A 94 -1 O TYR A 94 N ARG A 3 SHEET 1 B 4 THR B 37 ARG B 43 0 SHEET 2 B 4 PHE B 53 PHE B 59 -1 O GLY B 54 N LEU B 42 SHEET 3 B 4 ILE B 2 LEU B 10 -1 N PHE B 8 O PHE B 53 SHEET 4 B 4 VAL B 86 TYR B 94 -1 O TYR B 94 N ARG B 3 LINK C GLY A 0 N MSE A 1 1555 1555 1.34 LINK C MSE A 1 N ILE A 2 1555 1555 1.34 LINK C SER A 56 N MSE A 57 1555 1555 1.32 LINK C MSE A 57 N GLU A 58 1555 1555 1.33 LINK C GLY B 0 N MSE B 1 1555 1555 1.34 LINK C MSE B 1 N ILE B 2 1555 1555 1.33 LINK C SER B 56 N MSE B 57 1555 1555 1.33 LINK C MSE B 57 N GLU B 58 1555 1555 1.33 SITE 1 AC1 5 MSE A 1 THR A 37 HIS A 38 GLU A 58 SITE 2 AC1 5 ALA A 60 SITE 1 AC2 5 HIS B 4 TYR B 68 HIS B 74 VAL B 78 SITE 2 AC2 5 EDO B 106 SITE 1 AC3 5 HIS A 4 TYR A 68 HIS A 74 VAL A 78 SITE 2 AC3 5 EDO A 108 SITE 1 AC4 8 THR B 37 HIS B 38 LYS B 48 LYS B 88 SITE 2 AC4 8 PHE B 89 HOH B 145 HOH B 156 HOH B 187 SITE 1 AC5 6 GLN A 62 TYR A 65 THR A 66 ASN A 69 SITE 2 AC5 6 ALA B 63 HOH B 174 SITE 1 AC6 4 ASN B 69 HIS B 74 HOH B 116 HOH B 226 SITE 1 AC7 7 THR A 37 HIS A 38 LYS A 88 PHE A 89 SITE 2 AC7 7 HOH A 167 HOH A 218 HOH A 229 SITE 1 AC8 5 GLU A 18 ARG A 21 HOH A 148 ARG B 21 SITE 2 AC8 5 ARG B 81 SITE 1 AC9 5 PRO A 84 PRO B 72 ASP B 73 HOH B 119 SITE 2 AC9 5 HOH B 216 SITE 1 BC1 5 ASP A 80 HOH A 170 PRO B 72 VAL B 75 SITE 2 BC1 5 ARG B 79 SITE 1 BC2 5 VAL A 6 VAL A 78 TRP A 82 GLU A 91 SITE 2 BC2 5 EDO A 103 SITE 1 BC3 6 VAL B 6 TRP B 82 GLU B 91 EDO B 102 SITE 2 BC3 6 HOH B 226 HOH B 227 SITE 1 BC4 4 THR B 5 ILE B 92 TYR B 94 HOH B 208 SITE 1 BC5 4 ARG A 67 GLN B 62 TYR B 65 THR B 66 SITE 1 BC6 3 THR A 5 TYR A 94 HOH A 216 SITE 1 BC7 3 ASN A 69 HIS A 74 HOH A 131 CRYST1 118.669 28.415 76.985 90.00 117.78 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008427 0.000000 0.004440 0.00000 SCALE2 0.000000 0.035193 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014682 0.00000