HEADER MOTOR PROTEIN 22-NOV-07 3BFN OBSLTE 16-JAN-19 3BFN 6NJE TITLE CRYSTAL STRUCTURE OF THE MOTOR DOMAIN OF HUMAN KINESIN FAMILY MEMBER TITLE 2 22 COMPND MOL_ID: 1; COMPND 2 MOLECULE: KINESIN-LIKE PROTEIN KIF22; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: MOTOR DOMAIN: RESIDUES 40-400; COMPND 5 SYNONYM: KINESIN-LIKE DNA-BINDING PROTEIN, KINESIN-LIKE PROTEIN 4; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KIF22, KID, KNSL4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)CODON(+)RIL; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28-MHL KEYWDS LIMITED PROTEOLYSIS, KINESIN, STRUCTURAL GENOMICS CONSORTIUM, MOTOR KEYWDS 2 DOMAIN, ADP, SGC, ATP-BINDING, DNA-BINDING, MICROTUBULE, MOTOR KEYWDS 3 PROTEIN, NUCLEOTIDE-BINDING, NUCLEUS, PHOSPHOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.ZHU,Y.SHEN,W.TEMPEL,E.DOBROVETSKY,F.MACKENZIE,C.H.ARROWSMITH, AUTHOR 2 A.M.EDWARDS,J.WEIGELT,A.BOCHKAREV,H.PARK,STRUCTURAL GENOMICS AUTHOR 3 CONSORTIUM (SGC) REVDAT 6 16-JAN-19 3BFN 1 OBSLTE REVDAT 5 25-OCT-17 3BFN 1 REMARK REVDAT 4 29-FEB-12 3BFN 1 REMARK SEQRES COMPND SOURCE REVDAT 3 13-JUL-11 3BFN 1 VERSN REVDAT 2 24-FEB-09 3BFN 1 VERSN REVDAT 1 04-DEC-07 3BFN 0 JRNL AUTH H.ZHU,Y.SHEN,W.TEMPEL,E.DOBROVETSKY,F.MACKENZIE, JRNL AUTH 2 C.H.ARROWSMITH,A.M.EDWARDS,J.WEIGELT,A.BOCHKAREV,H.PARK JRNL TITL CRYSTAL STRUCTURE OF THE MOTOR DOMAIN OF HUMAN KINESIN JRNL TITL 2 FAMILY MEMBER 22. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.3.0037 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 14133 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 711 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 960 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.2500 REMARK 3 BIN FREE R VALUE SET COUNT : 55 REMARK 3 BIN FREE R VALUE : 0.3530 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2189 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 36 REMARK 3 SOLVENT ATOMS : 36 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.07000 REMARK 3 B22 (A**2) : -1.77000 REMARK 3 B33 (A**2) : 0.70000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.350 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.262 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.193 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.094 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.883 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2257 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1520 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3065 ; 1.392 ; 2.000 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3702 ; 0.914 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 284 ; 6.338 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 91 ;31.729 ;23.297 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 358 ;15.110 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;14.795 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 353 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2488 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 451 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 362 ; 0.191 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1488 ; 0.192 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1037 ; 0.170 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1195 ; 0.084 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 64 ; 0.130 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 8 ; 0.167 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 44 ; 0.296 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.112 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1503 ; 1.908 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 582 ; 0.499 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2292 ; 2.678 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 883 ; 1.954 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 773 ; 2.699 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 35 A 369 REMARK 3 ORIGIN FOR THE GROUP (A): 9.1695 45.9161 74.1552 REMARK 3 T TENSOR REMARK 3 T11: -0.1469 T22: -0.1206 REMARK 3 T33: -0.1445 T12: -0.0189 REMARK 3 T13: -0.0252 T23: 0.0245 REMARK 3 L TENSOR REMARK 3 L11: 1.5321 L22: 2.9752 REMARK 3 L33: 2.3375 L12: -0.1322 REMARK 3 L13: -0.8519 L23: 0.3638 REMARK 3 S TENSOR REMARK 3 S11: 0.0674 S12: -0.0799 S13: 0.0742 REMARK 3 S21: 0.0750 S22: -0.0478 S23: -0.0664 REMARK 3 S31: -0.0784 S32: 0.0375 S33: -0.0196 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. PROGRAMS SCWRL, COOT, MOLPROBITY HAVE ALSO BEEN USED REMARK 3 IN REFINEMENT. ATOMIC TEMPERATURE FACTORS FOR THE TLS GROUP REMARK 3 CONSISTING OF PEPTIDE CHAIN A, ADP AND THE MAGNESIUM ION ARE REMARK 3 RESIDUALS FROM TLS REFINEMENT. PEPTIDE FRAGMENTS 501-502 AND 601- REMARK 3 607 COULD NOT BE ASSIGNED PRECISELY TO THE AMINO ACID SEQUENCE REMARK 3 OF THE KIF22 PEPTIDE CONSTRUCT. THEY APPEAR TO BELONG TO THE REMARK 3 LARGELY DISORDERED REGION BETWEEN RESIDUES A54 AND A84 OF KIF22. REMARK 4 REMARK 4 3BFN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-NOV-07. REMARK 100 THE DEPOSITION ID IS D_1000045460. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-OCT-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14207 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.12300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.65300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3B6U REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.2 M NACL, 0.1 M TRIS-HCL, PH 8.5, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.26550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.22550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.36500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.22550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.26550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.36500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 22 REMARK 465 HIS A 23 REMARK 465 HIS A 24 REMARK 465 HIS A 25 REMARK 465 HIS A 26 REMARK 465 HIS A 27 REMARK 465 HIS A 28 REMARK 465 SER A 29 REMARK 465 SER A 30 REMARK 465 GLY A 31 REMARK 465 ARG A 32 REMARK 465 GLU A 33 REMARK 465 ASN A 34 REMARK 465 ASP A 55 REMARK 465 GLY A 56 REMARK 465 THR A 57 REMARK 465 ALA A 58 REMARK 465 GLY A 59 REMARK 465 ALA A 60 REMARK 465 SER A 61 REMARK 465 ASP A 62 REMARK 465 PRO A 63 REMARK 465 PRO A 64 REMARK 465 CYS A 65 REMARK 465 VAL A 66 REMARK 465 ARG A 67 REMARK 465 GLY A 68 REMARK 465 MET A 69 REMARK 465 ASP A 70 REMARK 465 SER A 71 REMARK 465 CYS A 72 REMARK 465 SER A 73 REMARK 465 LEU A 74 REMARK 465 GLU A 75 REMARK 465 ILE A 76 REMARK 465 ALA A 77 REMARK 465 ASN A 78 REMARK 465 TRP A 79 REMARK 465 ARG A 80 REMARK 465 ASN A 81 REMARK 465 HIS A 82 REMARK 465 GLN A 83 REMARK 465 ASN A 231 REMARK 465 ARG A 232 REMARK 465 THR A 233 REMARK 465 VAL A 234 REMARK 465 GLY A 235 REMARK 465 ALA A 236 REMARK 465 THR A 237 REMARK 465 ARG A 238 REMARK 465 LEU A 239 REMARK 465 ASN A 240 REMARK 465 GLN A 241 REMARK 465 ASN A 281 REMARK 465 ARG A 282 REMARK 465 ARG A 283 REMARK 465 THR A 284 REMARK 465 GLY A 285 REMARK 465 ASN A 286 REMARK 465 LYS A 287 REMARK 465 GLY A 288 REMARK 465 LEU A 289 REMARK 465 ARG A 290 REMARK 465 LEU A 291 REMARK 465 LYS A 292 REMARK 465 GLU A 293 REMARK 465 SER A 294 REMARK 465 ASN A 370 REMARK 465 ARG A 371 REMARK 465 PRO A 372 REMARK 465 PHE A 373 REMARK 465 THR A 374 REMARK 465 ASN A 375 REMARK 465 GLU A 376 REMARK 465 SER A 377 REMARK 465 LEU A 378 REMARK 465 GLN A 379 REMARK 465 PRO A 380 REMARK 465 HIS A 381 REMARK 465 ALA A 382 REMARK 465 LEU A 383 REMARK 465 GLY A 384 REMARK 465 PRO A 385 REMARK 465 VAL A 386 REMARK 465 LYS A 387 REMARK 465 LEU A 388 REMARK 465 SER A 389 REMARK 465 GLN A 390 REMARK 465 LYS A 391 REMARK 465 GLU A 392 REMARK 465 LEU A 393 REMARK 465 LEU A 394 REMARK 465 GLY A 395 REMARK 465 PRO A 396 REMARK 465 PRO A 397 REMARK 465 GLU A 398 REMARK 465 ALA A 399 REMARK 465 LYS A 400 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 38 CG CD OE1 NE2 REMARK 470 LYS A 87 CE NZ REMARK 470 GLU A 96 CG CD OE1 OE2 REMARK 470 GLN A 156 CD OE1 NE2 REMARK 470 ARG A 166 NE CZ NH1 NH2 REMARK 470 ARG A 223 NE CZ NH1 NH2 REMARK 470 ARG A 242 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 257 NE CZ NH1 NH2 REMARK 470 ARG A 317 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 321 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 349 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 350 NE CZ NH1 NH2 REMARK 470 GLU A 367 CD OE1 OE2 REMARK 470 ILE A 369 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CE MET A 152 UNK UNX A 702 1.92 REMARK 500 OE2 GLU A 178 UNK UNX A 707 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 37 -152.52 -85.15 REMARK 500 VAL A 108 -54.20 -120.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 801 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 134 OG1 REMARK 620 2 ADP A 802 O1B 82.4 REMARK 620 3 HOH A 828 O 84.6 93.0 REMARK 620 4 HOH A 834 O 93.5 82.5 175.3 REMARK 620 5 HOH A 827 O 87.5 169.5 88.6 95.6 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 705 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 706 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 707 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNX A 708 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 802 REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUES UNK 501-502 AND UNK 601-607 ARE FRAGMENTS OF REMARK 999 ENTITY 1 THAT WERE MODELED AS POLY-ALA. THEIR SEQUENCE REMARK 999 POSITION IS UNKNOWN DUE TO INSUFFICIENT ELECTRON DENSITY. DBREF 3BFN A 40 400 UNP Q14807 KIF22_HUMAN 40 400 SEQADV 3BFN MET A 22 UNP Q14807 EXPRESSION TAG SEQADV 3BFN HIS A 23 UNP Q14807 EXPRESSION TAG SEQADV 3BFN HIS A 24 UNP Q14807 EXPRESSION TAG SEQADV 3BFN HIS A 25 UNP Q14807 EXPRESSION TAG SEQADV 3BFN HIS A 26 UNP Q14807 EXPRESSION TAG SEQADV 3BFN HIS A 27 UNP Q14807 EXPRESSION TAG SEQADV 3BFN HIS A 28 UNP Q14807 EXPRESSION TAG SEQADV 3BFN SER A 29 UNP Q14807 EXPRESSION TAG SEQADV 3BFN SER A 30 UNP Q14807 EXPRESSION TAG SEQADV 3BFN GLY A 31 UNP Q14807 EXPRESSION TAG SEQADV 3BFN ARG A 32 UNP Q14807 EXPRESSION TAG SEQADV 3BFN GLU A 33 UNP Q14807 EXPRESSION TAG SEQADV 3BFN ASN A 34 UNP Q14807 EXPRESSION TAG SEQADV 3BFN LEU A 35 UNP Q14807 EXPRESSION TAG SEQADV 3BFN TYR A 36 UNP Q14807 EXPRESSION TAG SEQADV 3BFN PHE A 37 UNP Q14807 EXPRESSION TAG SEQADV 3BFN GLN A 38 UNP Q14807 EXPRESSION TAG SEQADV 3BFN GLY A 39 UNP Q14807 EXPRESSION TAG SEQRES 1 A 388 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 A 388 LEU TYR PHE GLN GLY PRO PRO ALA ARG VAL ARG VAL ALA SEQRES 3 A 388 VAL ARG LEU ARG PRO PHE VAL ASP GLY THR ALA GLY ALA SEQRES 4 A 388 SER ASP PRO PRO CYS VAL ARG GLY MET ASP SER CYS SER SEQRES 5 A 388 LEU GLU ILE ALA ASN TRP ARG ASN HIS GLN GLU THR LEU SEQRES 6 A 388 LYS TYR GLN PHE ASP ALA PHE TYR GLY GLU ARG SER THR SEQRES 7 A 388 GLN GLN ASP ILE TYR ALA GLY SER VAL GLN PRO ILE LEU SEQRES 8 A 388 ARG HIS LEU LEU GLU GLY GLN ASN ALA SER VAL LEU ALA SEQRES 9 A 388 TYR GLY PRO THR GLY ALA GLY LYS THR HIS THR MET LEU SEQRES 10 A 388 GLY SER PRO GLU GLN PRO GLY VAL ILE PRO ARG ALA LEU SEQRES 11 A 388 MET ASP LEU LEU GLN LEU THR ARG GLU GLU GLY ALA GLU SEQRES 12 A 388 GLY ARG PRO TRP ALA LEU SER VAL THR MET SER TYR LEU SEQRES 13 A 388 GLU ILE TYR GLN GLU LYS VAL LEU ASP LEU LEU ASP PRO SEQRES 14 A 388 ALA SER GLY ASP LEU VAL ILE ARG GLU ASP CYS ARG GLY SEQRES 15 A 388 ASN ILE LEU ILE PRO GLY LEU SER GLN LYS PRO ILE SER SEQRES 16 A 388 SER PHE ALA ASP PHE GLU ARG HIS PHE LEU PRO ALA SER SEQRES 17 A 388 ARG ASN ARG THR VAL GLY ALA THR ARG LEU ASN GLN ARG SEQRES 18 A 388 SER SER ARG SER HIS ALA VAL LEU LEU VAL LYS VAL ASP SEQRES 19 A 388 GLN ARG GLU ARG LEU ALA PRO PHE ARG GLN ARG GLU GLY SEQRES 20 A 388 LYS LEU TYR LEU ILE ASP LEU ALA GLY SER GLU ASP ASN SEQRES 21 A 388 ARG ARG THR GLY ASN LYS GLY LEU ARG LEU LYS GLU SER SEQRES 22 A 388 GLY ALA ILE ASN THR SER LEU PHE VAL LEU GLY LYS VAL SEQRES 23 A 388 VAL ASP ALA LEU ASN GLN GLY LEU PRO ARG VAL PRO TYR SEQRES 24 A 388 ARG ASP SER LYS LEU THR ARG LEU LEU GLN ASP SER LEU SEQRES 25 A 388 GLY GLY SER ALA HIS SER ILE LEU ILE ALA ASN ILE ALA SEQRES 26 A 388 PRO GLU ARG ARG PHE TYR LEU ASP THR VAL SER ALA LEU SEQRES 27 A 388 ASN PHE ALA ALA ARG SER LYS GLU VAL ILE ASN ARG PRO SEQRES 28 A 388 PHE THR ASN GLU SER LEU GLN PRO HIS ALA LEU GLY PRO SEQRES 29 A 388 VAL LYS LEU SER GLN LYS GLU LEU LEU GLY PRO PRO GLU SEQRES 30 A 388 ALA LYS UNK UNK UNK UNK UNK UNK UNK UNK UNK HET MG A 801 1 HET UNX A 701 1 HET UNX A 702 1 HET UNX A 703 1 HET UNX A 704 1 HET UNX A 705 1 HET UNX A 706 1 HET UNX A 707 1 HET UNX A 708 1 HET ADP A 802 27 HETNAM MG MAGNESIUM ION HETNAM UNX UNKNOWN ATOM OR ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE FORMUL 2 MG MG 2+ FORMUL 3 UNX 8(X) FORMUL 11 ADP C10 H15 N5 O10 P2 FORMUL 12 HOH *36(H2 O) HELIX 1 1 THR A 99 VAL A 108 1 10 HELIX 2 2 ILE A 111 LEU A 116 1 6 HELIX 3 3 GLY A 132 LEU A 138 1 7 HELIX 4 4 GLY A 145 GLY A 162 1 18 HELIX 5 5 SER A 217 SER A 229 1 13 HELIX 6 6 ARG A 242 SER A 246 5 5 HELIX 7 7 ASN A 298 GLN A 313 1 16 HELIX 8 8 PRO A 319 ASP A 322 5 4 HELIX 9 9 SER A 323 LEU A 329 1 7 HELIX 10 10 GLU A 348 ARG A 350 5 3 HELIX 11 11 PHE A 351 ALA A 363 1 13 SHEET 1 A 8 ALA A 92 TYR A 94 0 SHEET 2 A 8 ARG A 45 LEU A 50 1 N VAL A 48 O TYR A 94 SHEET 3 A 8 HIS A 338 ILE A 345 1 O ALA A 343 N ALA A 47 SHEET 4 A 8 ALA A 121 TYR A 126 1 N LEU A 124 O ILE A 342 SHEET 5 A 8 GLN A 265 ASP A 274 1 O TYR A 271 N ALA A 121 SHEET 6 A 8 HIS A 247 GLU A 258 -1 N VAL A 252 O LEU A 270 SHEET 7 A 8 TRP A 168 TYR A 180 -1 N SER A 175 O LEU A 251 SHEET 8 A 8 LYS A 183 ASP A 186 -1 O LEU A 185 N GLU A 178 SHEET 1 B 8 ALA A 92 TYR A 94 0 SHEET 2 B 8 ARG A 45 LEU A 50 1 N VAL A 48 O TYR A 94 SHEET 3 B 8 HIS A 338 ILE A 345 1 O ALA A 343 N ALA A 47 SHEET 4 B 8 ALA A 121 TYR A 126 1 N LEU A 124 O ILE A 342 SHEET 5 B 8 GLN A 265 ASP A 274 1 O TYR A 271 N ALA A 121 SHEET 6 B 8 HIS A 247 GLU A 258 -1 N VAL A 252 O LEU A 270 SHEET 7 B 8 TRP A 168 TYR A 180 -1 N SER A 175 O LEU A 251 SHEET 8 B 8 LYS A 213 PRO A 214 -1 O LYS A 213 N MET A 174 SHEET 1 C 3 SER A 365 ILE A 369 0 SHEET 2 C 3 THR A 85 GLN A 89 -1 N THR A 85 O ILE A 369 SHEET 1 D 2 ARG A 198 GLU A 199 0 SHEET 2 D 2 ILE A 205 LEU A 206 -1 O LEU A 206 N ARG A 198 LINK OG1 THR A 134 MG MG A 801 1555 1555 2.13 LINK MG MG A 801 O1B ADP A 802 1555 1555 2.14 LINK MG MG A 801 O HOH A 828 1555 1555 2.05 LINK MG MG A 801 O HOH A 834 1555 1555 2.21 LINK MG MG A 801 O HOH A 827 1555 1555 2.23 CISPEP 1 ALA A 261 PRO A 262 0 3.79 SITE 1 AC1 5 THR A 134 ADP A 802 HOH A 827 HOH A 828 SITE 2 AC1 5 HOH A 834 SITE 1 AC2 3 ARG A 43 VAL A 44 ASP A 91 SITE 1 AC3 2 GLN A 89 MET A 152 SITE 1 AC4 4 ASP A 200 CYS A 201 ARG A 202 THR A 299 SITE 1 AC5 2 ARG A 45 ARG A 97 SITE 1 AC6 4 GLN A 119 ASN A 120 SER A 336 ALA A 337 SITE 1 AC7 2 GLN A 101 ARG A 364 SITE 1 AC8 2 GLU A 178 TYR A 180 SITE 1 AC9 3 ARG A 159 SER A 217 PHE A 218 SITE 1 BC1 15 ARG A 49 ARG A 51 PRO A 52 PRO A 128 SITE 2 BC1 15 THR A 129 GLY A 130 ALA A 131 GLY A 132 SITE 3 BC1 15 LYS A 133 THR A 134 HIS A 135 MG A 801 SITE 4 BC1 15 HOH A 805 HOH A 828 HOH A 834 CRYST1 44.531 58.730 116.451 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022460 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017030 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008590 0.00000