HEADER TRANSFERASE 23-NOV-07 3BFX TITLE CRYSTAL STRUCTURE OF HUMAN SULFOTRANSFERASE SULT1C1 IN COMPLEX WITH TITLE 2 PAP COMPND MOL_ID: 1; COMPND 2 MOLECULE: SULFOTRANSFERASE 1C2; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SULFOTRANSFERASE 1C1, SULT1C#1, ST1C2, HUMSULTC2; COMPND 5 EC: 2.8.2.-; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SULT1C2, SULT1C1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS SULFOTRANSFERASE, PAP, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, STRUCTURAL GENOMICS CONSORTIUM, SGC, ALTERNATIVE KEYWDS 3 SPLICING, CYTOPLASM, POLYMORPHISM, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.DONG,L.DOMBROVSKI,P.LOPPNAU,A.M.EDWARDS,C.H.ARROWSMITH,J.WEIGELT, AUTHOR 2 M.SUNDSTROM,A.BOCHKAREV,A.N.PLOTNIKOV,STRUCTURAL GENOMICS CONSORTIUM AUTHOR 3 (SGC) REVDAT 4 30-AUG-23 3BFX 1 REMARK REVDAT 3 20-OCT-21 3BFX 1 REMARK SEQADV REVDAT 2 24-FEB-09 3BFX 1 VERSN REVDAT 1 04-DEC-07 3BFX 0 SPRSDE 04-DEC-07 3BFX 2ETG JRNL AUTH L.DOMBROVSKI,A.DONG,A.BOCHKAREV,A.N.PLOTNIKOV JRNL TITL CRYSTAL STRUCTURES OF HUMAN SULFOTRANSFERASES SULT1B1 AND JRNL TITL 2 SULT1C1 COMPLEXED WITH THE COFACTOR PRODUCT JRNL TITL 3 ADENOSINE-3'-5'-DIPHOSPHATE (PAP). JRNL REF PROTEINS V. 64 1091 2006 JRNL REFN ISSN 0887-3585 JRNL PMID 16804942 JRNL DOI 10.1002/PROT.21048 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 52393 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1670 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2862 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 71.38 REMARK 3 BIN R VALUE (WORKING SET) : 0.2150 REMARK 3 BIN FREE R VALUE SET COUNT : 103 REMARK 3 BIN FREE R VALUE : 0.2850 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4199 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 54 REMARK 3 SOLVENT ATOMS : 512 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.02000 REMARK 3 B22 (A**2) : -0.58000 REMARK 3 B33 (A**2) : -1.35000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.35000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.129 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.127 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.086 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.702 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4410 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5967 ; 1.533 ; 1.945 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 500 ; 5.776 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 221 ;34.606 ;24.253 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 787 ;15.579 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;18.625 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 603 ; 0.111 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3347 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2277 ; 0.213 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2993 ; 0.312 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 415 ; 0.173 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 45 ; 0.193 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 24 ; 0.130 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2601 ; 1.100 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4099 ; 1.677 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2140 ; 2.588 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1868 ; 4.022 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. PROGRAM COOT 0.0.33 ALSO HAS BEEN USED IN REFINEMENT REMARK 4 REMARK 4 3BFX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-NOV-07. REMARK 100 THE DEPOSITION ID IS D_1000045470. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUL-05 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97972 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : SI 111 REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54077 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : 0.04200 REMARK 200 FOR THE DATA SET : 13.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 70.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.20500 REMARK 200 R SYM FOR SHELL (I) : 0.20500 REMARK 200 FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1XV1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0M NA CITRATE, 0.1M CACODYLATE, PH REMARK 280 6.5, VAPOR DIFFUSION, TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 SER A 2 REMARK 465 LEU A 3 REMARK 465 THR A 4 REMARK 465 SER A 5 REMARK 465 ASP A 6 REMARK 465 LEU A 7 REMARK 465 GLY A 8 REMARK 465 LYS A 9 REMARK 465 GLN A 10 REMARK 465 ILE A 11 REMARK 465 ASP A 67 REMARK 465 VAL A 68 REMARK 465 GLU A 69 REMARK 465 LYS A 70 REMARK 465 CYS A 71 REMARK 465 GLN A 72 REMARK 465 ARG A 73 REMARK 465 ALA A 74 REMARK 465 ILE A 75 REMARK 465 ILE A 76 REMARK 465 GLN A 77 REMARK 465 HIS A 78 REMARK 465 ARG A 79 REMARK 465 PRO A 237 REMARK 465 MET A 238 REMARK 465 THR A 239 REMARK 465 ASN A 240 REMARK 465 ARG A 241 REMARK 465 SER A 242 REMARK 465 THR A 243 REMARK 465 VAL A 244 REMARK 465 SER A 245 REMARK 465 LYS A 246 REMARK 465 SER A 247 REMARK 465 ILE A 248 REMARK 465 LEU A 249 REMARK 465 ASP A 250 REMARK 465 GLN A 251 REMARK 465 SER A 252 REMARK 465 ILE A 253 REMARK 465 SER A 254 REMARK 465 SER A 255 REMARK 465 GLY B 1 REMARK 465 SER B 2 REMARK 465 LEU B 3 REMARK 465 THR B 4 REMARK 465 SER B 5 REMARK 465 ASP B 6 REMARK 465 LEU B 7 REMARK 465 GLY B 8 REMARK 465 LYS B 9 REMARK 465 GLN B 10 REMARK 465 ILE B 11 REMARK 465 ASP B 67 REMARK 465 VAL B 68 REMARK 465 GLU B 69 REMARK 465 LYS B 70 REMARK 465 CYS B 71 REMARK 465 GLN B 72 REMARK 465 ARG B 73 REMARK 465 ALA B 74 REMARK 465 ILE B 75 REMARK 465 ILE B 76 REMARK 465 GLN B 77 REMARK 465 HIS B 78 REMARK 465 ARG B 79 REMARK 465 VAL B 216 REMARK 465 ASP B 217 REMARK 465 LYS B 234 REMARK 465 GLU B 235 REMARK 465 ASN B 236 REMARK 465 PRO B 237 REMARK 465 MET B 238 REMARK 465 THR B 239 REMARK 465 ASN B 240 REMARK 465 ARG B 241 REMARK 465 SER B 242 REMARK 465 THR B 243 REMARK 465 VAL B 244 REMARK 465 SER B 245 REMARK 465 LYS B 246 REMARK 465 SER B 247 REMARK 465 ILE B 248 REMARK 465 LEU B 249 REMARK 465 ASP B 250 REMARK 465 GLN B 251 REMARK 465 SER B 252 REMARK 465 ILE B 253 REMARK 465 SER B 254 REMARK 465 SER B 255 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU A 150 O HOH A 4210 2.17 REMARK 500 OE2 GLU B 161 NH1 ARG B 276 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLN A 64 N - CA - C ANGL. DEV. = 16.9 DEGREES REMARK 500 ARG B 131 NE - CZ - NH1 ANGL. DEV. = 5.3 DEGREES REMARK 500 ARG B 131 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 49 3.00 81.43 REMARK 500 ARG A 87 74.47 -164.13 REMARK 500 ARG A 258 -71.22 -91.80 REMARK 500 LYS B 49 -0.88 80.59 REMARK 500 GLN B 64 -78.81 -74.78 REMARK 500 GLN B 64 -78.81 -71.46 REMARK 500 LYS B 167 50.23 -90.61 REMARK 500 ARG B 258 -82.56 -83.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE A3P A 4000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE A3P A 4001 DBREF 3BFX A 3 296 UNP O00338 ST1C2_HUMAN 3 296 DBREF 3BFX B 3 296 UNP O00338 ST1C2_HUMAN 3 296 SEQADV 3BFX GLY A 1 UNP O00338 EXPRESSION TAG SEQADV 3BFX SER A 2 UNP O00338 EXPRESSION TAG SEQADV 3BFX SER A 293 UNP O00338 CYS 293 ENGINEERED MUTATION SEQADV 3BFX GLY B 1 UNP O00338 EXPRESSION TAG SEQADV 3BFX SER B 2 UNP O00338 EXPRESSION TAG SEQADV 3BFX SER B 293 UNP O00338 CYS 293 ENGINEERED MUTATION SEQRES 1 A 296 GLY SER LEU THR SER ASP LEU GLY LYS GLN ILE LYS LEU SEQRES 2 A 296 LYS GLU VAL GLU GLY THR LEU LEU GLN PRO ALA THR VAL SEQRES 3 A 296 ASP ASN TRP SER GLN ILE GLN SER PHE GLU ALA LYS PRO SEQRES 4 A 296 ASP ASP LEU LEU ILE CYS THR TYR PRO LYS ALA GLY THR SEQRES 5 A 296 THR TRP ILE GLN GLU ILE VAL ASP MET ILE GLU GLN ASN SEQRES 6 A 296 GLY ASP VAL GLU LYS CYS GLN ARG ALA ILE ILE GLN HIS SEQRES 7 A 296 ARG HIS PRO PHE ILE GLU TRP ALA ARG PRO PRO GLN PRO SEQRES 8 A 296 SER GLY VAL GLU LYS ALA LYS ALA MET PRO SER PRO ARG SEQRES 9 A 296 ILE LEU LYS THR HIS LEU SER THR GLN LEU LEU PRO PRO SEQRES 10 A 296 SER PHE TRP GLU ASN ASN CYS LYS PHE LEU TYR VAL ALA SEQRES 11 A 296 ARG ASN ALA LYS ASP CYS MET VAL SER TYR TYR HIS PHE SEQRES 12 A 296 GLN ARG MET ASN HIS MET LEU PRO ASP PRO GLY THR TRP SEQRES 13 A 296 GLU GLU TYR PHE GLU THR PHE ILE ASN GLY LYS VAL VAL SEQRES 14 A 296 TRP GLY SER TRP PHE ASP HIS VAL LYS GLY TRP TRP GLU SEQRES 15 A 296 MET LYS ASP ARG HIS GLN ILE LEU PHE LEU PHE TYR GLU SEQRES 16 A 296 ASP ILE LYS ARG ASP PRO LYS HIS GLU ILE ARG LYS VAL SEQRES 17 A 296 MET GLN PHE MET GLY LYS LYS VAL ASP GLU THR VAL LEU SEQRES 18 A 296 ASP LYS ILE VAL GLN GLU THR SER PHE GLU LYS MET LYS SEQRES 19 A 296 GLU ASN PRO MET THR ASN ARG SER THR VAL SER LYS SER SEQRES 20 A 296 ILE LEU ASP GLN SER ILE SER SER PHE MET ARG LYS GLY SEQRES 21 A 296 THR VAL GLY ASP TRP LYS ASN HIS PHE THR VAL ALA GLN SEQRES 22 A 296 ASN GLU ARG PHE ASP GLU ILE TYR ARG ARG LYS MET GLU SEQRES 23 A 296 GLY THR SER ILE ASN PHE SER MET GLU LEU SEQRES 1 B 296 GLY SER LEU THR SER ASP LEU GLY LYS GLN ILE LYS LEU SEQRES 2 B 296 LYS GLU VAL GLU GLY THR LEU LEU GLN PRO ALA THR VAL SEQRES 3 B 296 ASP ASN TRP SER GLN ILE GLN SER PHE GLU ALA LYS PRO SEQRES 4 B 296 ASP ASP LEU LEU ILE CYS THR TYR PRO LYS ALA GLY THR SEQRES 5 B 296 THR TRP ILE GLN GLU ILE VAL ASP MET ILE GLU GLN ASN SEQRES 6 B 296 GLY ASP VAL GLU LYS CYS GLN ARG ALA ILE ILE GLN HIS SEQRES 7 B 296 ARG HIS PRO PHE ILE GLU TRP ALA ARG PRO PRO GLN PRO SEQRES 8 B 296 SER GLY VAL GLU LYS ALA LYS ALA MET PRO SER PRO ARG SEQRES 9 B 296 ILE LEU LYS THR HIS LEU SER THR GLN LEU LEU PRO PRO SEQRES 10 B 296 SER PHE TRP GLU ASN ASN CYS LYS PHE LEU TYR VAL ALA SEQRES 11 B 296 ARG ASN ALA LYS ASP CYS MET VAL SER TYR TYR HIS PHE SEQRES 12 B 296 GLN ARG MET ASN HIS MET LEU PRO ASP PRO GLY THR TRP SEQRES 13 B 296 GLU GLU TYR PHE GLU THR PHE ILE ASN GLY LYS VAL VAL SEQRES 14 B 296 TRP GLY SER TRP PHE ASP HIS VAL LYS GLY TRP TRP GLU SEQRES 15 B 296 MET LYS ASP ARG HIS GLN ILE LEU PHE LEU PHE TYR GLU SEQRES 16 B 296 ASP ILE LYS ARG ASP PRO LYS HIS GLU ILE ARG LYS VAL SEQRES 17 B 296 MET GLN PHE MET GLY LYS LYS VAL ASP GLU THR VAL LEU SEQRES 18 B 296 ASP LYS ILE VAL GLN GLU THR SER PHE GLU LYS MET LYS SEQRES 19 B 296 GLU ASN PRO MET THR ASN ARG SER THR VAL SER LYS SER SEQRES 20 B 296 ILE LEU ASP GLN SER ILE SER SER PHE MET ARG LYS GLY SEQRES 21 B 296 THR VAL GLY ASP TRP LYS ASN HIS PHE THR VAL ALA GLN SEQRES 22 B 296 ASN GLU ARG PHE ASP GLU ILE TYR ARG ARG LYS MET GLU SEQRES 23 B 296 GLY THR SER ILE ASN PHE SER MET GLU LEU HET A3P A4000 27 HET A3P A4001 27 HETNAM A3P ADENOSINE-3'-5'-DIPHOSPHATE FORMUL 3 A3P 2(C10 H15 N5 O10 P2) FORMUL 5 HOH *512(H2 O) HELIX 1 1 GLN A 22 ASN A 28 1 7 HELIX 2 2 ASN A 28 SER A 34 1 7 HELIX 3 3 GLY A 51 ASN A 65 1 15 HELIX 4 4 SER A 92 MET A 100 1 9 HELIX 5 5 PRO A 117 ASN A 122 1 6 HELIX 6 6 ASN A 132 ASN A 147 1 16 HELIX 7 7 THR A 155 ASN A 165 1 11 HELIX 8 8 SER A 172 LYS A 184 1 13 HELIX 9 9 TYR A 194 ASP A 200 1 7 HELIX 10 10 ASP A 200 MET A 212 1 13 HELIX 11 11 ASP A 217 THR A 228 1 12 HELIX 12 12 SER A 229 ASN A 236 1 8 HELIX 13 13 ASP A 264 PHE A 269 1 6 HELIX 14 14 THR A 270 GLU A 286 1 17 HELIX 15 15 GLN B 22 ASN B 28 1 7 HELIX 16 16 ASN B 28 SER B 34 1 7 HELIX 17 17 GLY B 51 ASN B 65 1 15 HELIX 18 18 SER B 92 MET B 100 1 9 HELIX 19 19 PRO B 116 ASN B 122 5 7 HELIX 20 20 ASN B 132 ASN B 147 1 16 HELIX 21 21 THR B 155 ASN B 165 1 11 HELIX 22 22 SER B 172 LYS B 184 1 13 HELIX 23 23 TYR B 194 ASP B 200 1 7 HELIX 24 24 ASP B 200 MET B 212 1 13 HELIX 25 25 GLU B 218 THR B 228 1 11 HELIX 26 26 GLY B 263 HIS B 268 5 6 HELIX 27 27 THR B 270 MET B 285 1 16 SHEET 1 A 2 LYS A 14 VAL A 16 0 SHEET 2 A 2 THR A 19 LEU A 21 -1 O LEU A 21 N LYS A 14 SHEET 1 B 4 ILE A 105 THR A 108 0 SHEET 2 B 4 LEU A 42 THR A 46 1 N ILE A 44 O LEU A 106 SHEET 3 B 4 LYS A 125 ALA A 130 1 O LYS A 125 N LEU A 43 SHEET 4 B 4 GLN A 188 PHE A 193 1 O LEU A 192 N TYR A 128 SHEET 1 C 2 LYS B 14 VAL B 16 0 SHEET 2 C 2 THR B 19 LEU B 21 -1 O LEU B 21 N LYS B 14 SHEET 1 D 4 ILE B 105 THR B 108 0 SHEET 2 D 4 LEU B 42 THR B 46 1 N ILE B 44 O LEU B 106 SHEET 3 D 4 LYS B 125 ALA B 130 1 O LEU B 127 N LEU B 43 SHEET 4 D 4 GLN B 188 PHE B 193 1 O LEU B 192 N TYR B 128 CISPEP 1 GLN A 64 ASN A 65 0 3.12 CISPEP 2 PRO A 88 PRO A 89 0 2.76 CISPEP 3 SER A 102 PRO A 103 0 -3.87 CISPEP 4 GLN B 64 ASN B 65 0 21.45 CISPEP 5 PRO B 88 PRO B 89 0 1.19 CISPEP 6 SER B 102 PRO B 103 0 -5.55 SITE 1 AC1 23 LYS A 49 ALA A 50 GLY A 51 THR A 52 SITE 2 AC1 23 THR A 53 TRP A 54 ARG A 131 SER A 139 SITE 3 AC1 23 TYR A 194 THR A 228 SER A 229 PHE A 230 SITE 4 AC1 23 MET A 233 MET A 257 ARG A 258 LYS A 259 SITE 5 AC1 23 GLY A 260 HOH A4009 HOH A4011 HOH A4015 SITE 6 AC1 23 HOH A4019 HOH A4025 HOH A4058 SITE 1 AC2 23 HOH A4017 HOH A4026 HOH A4042 HOH A4100 SITE 2 AC2 23 HOH A4120 LYS B 49 ALA B 50 GLY B 51 SITE 3 AC2 23 THR B 52 THR B 53 TRP B 54 ARG B 131 SITE 4 AC2 23 SER B 139 TYR B 194 THR B 228 PHE B 230 SITE 5 AC2 23 MET B 233 PHE B 256 MET B 257 ARG B 258 SITE 6 AC2 23 LYS B 259 GLY B 260 HOH B 348 CRYST1 48.824 40.536 154.612 90.00 91.83 90.00 P 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020482 0.000000 0.000654 0.00000 SCALE2 0.000000 0.024669 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006471 0.00000