data_3BHN # _entry.id 3BHN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3BHN pdb_00003bhn 10.2210/pdb3bhn/pdb RCSB RCSB045532 ? ? WWPDB D_1000045532 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 377869 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3BHN _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-11-28 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of DJ-1 like Protein (YP_001094981.1) from Shewanella loihica PV-4 at 1.76 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3BHN _cell.length_a 71.320 _cell.length_b 71.320 _cell.length_c 180.630 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3BHN _symmetry.Int_Tables_number 178 _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ThiJ/PfpI domain protein' 26389.922 1 ? ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 3 ? ? ? ? 3 water nat water 18.015 204 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GSDKIHHHHHHENLYFQG(MSE)YKVGIVLFDDFTDVDFFL(MSE)NDLLGRTSDSWTVRILGTKPEHHSQLG (MSE)TVKTDGHVSEVKEQDVVLITSGYRGIPAALQDENF(MSE)SALKLDPSRQLIGSICAGSFVLHELGLLKGKKLTT NPDAKAVLQG(MSE)GGDVQDLPLVIEGNIATAGGCLSLLYLVGWLAERLFDSVKRKQIQNQLIPAGQ(MSE)EIFETLI SETIQSAESAYEYRSACESDAESLVV ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSDKIHHHHHHENLYFQGMYKVGIVLFDDFTDVDFFLMNDLLGRTSDSWTVRILGTKPEHHSQLGMTVKTDGHVSEVKE QDVVLITSGYRGIPAALQDENFMSALKLDPSRQLIGSICAGSFVLHELGLLKGKKLTTNPDAKAVLQGMGGDVQDLPLVI EGNIATAGGCLSLLYLVGWLAERLFDSVKRKQIQNQLIPAGQMEIFETLISETIQSAESAYEYRSACESDAESLVV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 377869 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 SER n 1 4 ASP n 1 5 LYS n 1 6 ILE n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 HIS n 1 12 HIS n 1 13 GLU n 1 14 ASN n 1 15 LEU n 1 16 TYR n 1 17 PHE n 1 18 GLN n 1 19 GLY n 1 20 MSE n 1 21 TYR n 1 22 LYS n 1 23 VAL n 1 24 GLY n 1 25 ILE n 1 26 VAL n 1 27 LEU n 1 28 PHE n 1 29 ASP n 1 30 ASP n 1 31 PHE n 1 32 THR n 1 33 ASP n 1 34 VAL n 1 35 ASP n 1 36 PHE n 1 37 PHE n 1 38 LEU n 1 39 MSE n 1 40 ASN n 1 41 ASP n 1 42 LEU n 1 43 LEU n 1 44 GLY n 1 45 ARG n 1 46 THR n 1 47 SER n 1 48 ASP n 1 49 SER n 1 50 TRP n 1 51 THR n 1 52 VAL n 1 53 ARG n 1 54 ILE n 1 55 LEU n 1 56 GLY n 1 57 THR n 1 58 LYS n 1 59 PRO n 1 60 GLU n 1 61 HIS n 1 62 HIS n 1 63 SER n 1 64 GLN n 1 65 LEU n 1 66 GLY n 1 67 MSE n 1 68 THR n 1 69 VAL n 1 70 LYS n 1 71 THR n 1 72 ASP n 1 73 GLY n 1 74 HIS n 1 75 VAL n 1 76 SER n 1 77 GLU n 1 78 VAL n 1 79 LYS n 1 80 GLU n 1 81 GLN n 1 82 ASP n 1 83 VAL n 1 84 VAL n 1 85 LEU n 1 86 ILE n 1 87 THR n 1 88 SER n 1 89 GLY n 1 90 TYR n 1 91 ARG n 1 92 GLY n 1 93 ILE n 1 94 PRO n 1 95 ALA n 1 96 ALA n 1 97 LEU n 1 98 GLN n 1 99 ASP n 1 100 GLU n 1 101 ASN n 1 102 PHE n 1 103 MSE n 1 104 SER n 1 105 ALA n 1 106 LEU n 1 107 LYS n 1 108 LEU n 1 109 ASP n 1 110 PRO n 1 111 SER n 1 112 ARG n 1 113 GLN n 1 114 LEU n 1 115 ILE n 1 116 GLY n 1 117 SER n 1 118 ILE n 1 119 CYS n 1 120 ALA n 1 121 GLY n 1 122 SER n 1 123 PHE n 1 124 VAL n 1 125 LEU n 1 126 HIS n 1 127 GLU n 1 128 LEU n 1 129 GLY n 1 130 LEU n 1 131 LEU n 1 132 LYS n 1 133 GLY n 1 134 LYS n 1 135 LYS n 1 136 LEU n 1 137 THR n 1 138 THR n 1 139 ASN n 1 140 PRO n 1 141 ASP n 1 142 ALA n 1 143 LYS n 1 144 ALA n 1 145 VAL n 1 146 LEU n 1 147 GLN n 1 148 GLY n 1 149 MSE n 1 150 GLY n 1 151 GLY n 1 152 ASP n 1 153 VAL n 1 154 GLN n 1 155 ASP n 1 156 LEU n 1 157 PRO n 1 158 LEU n 1 159 VAL n 1 160 ILE n 1 161 GLU n 1 162 GLY n 1 163 ASN n 1 164 ILE n 1 165 ALA n 1 166 THR n 1 167 ALA n 1 168 GLY n 1 169 GLY n 1 170 CYS n 1 171 LEU n 1 172 SER n 1 173 LEU n 1 174 LEU n 1 175 TYR n 1 176 LEU n 1 177 VAL n 1 178 GLY n 1 179 TRP n 1 180 LEU n 1 181 ALA n 1 182 GLU n 1 183 ARG n 1 184 LEU n 1 185 PHE n 1 186 ASP n 1 187 SER n 1 188 VAL n 1 189 LYS n 1 190 ARG n 1 191 LYS n 1 192 GLN n 1 193 ILE n 1 194 GLN n 1 195 ASN n 1 196 GLN n 1 197 LEU n 1 198 ILE n 1 199 PRO n 1 200 ALA n 1 201 GLY n 1 202 GLN n 1 203 MSE n 1 204 GLU n 1 205 ILE n 1 206 PHE n 1 207 GLU n 1 208 THR n 1 209 LEU n 1 210 ILE n 1 211 SER n 1 212 GLU n 1 213 THR n 1 214 ILE n 1 215 GLN n 1 216 SER n 1 217 ALA n 1 218 GLU n 1 219 SER n 1 220 ALA n 1 221 TYR n 1 222 GLU n 1 223 TYR n 1 224 ARG n 1 225 SER n 1 226 ALA n 1 227 CYS n 1 228 GLU n 1 229 SER n 1 230 ASP n 1 231 ALA n 1 232 GLU n 1 233 SER n 1 234 LEU n 1 235 VAL n 1 236 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Shewanella _entity_src_gen.pdbx_gene_src_gene 'YP_001094981.1, Shew_2856' _entity_src_gen.gene_src_species 'Shewanella loihica' _entity_src_gen.gene_src_strain 'PV-4, BAA-1088' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Shewanella loihica PV-4' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 323850 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name speedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A3QGX4_SHELP _struct_ref.pdbx_db_accession A3QGX4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MYKVGIVLFDDFTDVDFFLMNDLLGRTSDSWTVRILGTKPEHHSQLGMTVKTDGHVSEVKEQDVVLITSGYRGIPAALQD ENFMSALKLDPSRQLIGSICAGSFVLHELGLLKGKKLTTNPDAKAVLQGMGGDVQDLPLVIEGNIATAGGCLSLLYLVGW LAERLFDSVKRKQIQNQLIPAGQMEIFETLISETIQSAESAYEYRSACESDAESLVV ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3BHN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 20 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 236 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A3QGX4 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 217 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 217 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3BHN MSE A 1 ? UNP A3QGX4 ? ? 'expression tag' -18 1 1 3BHN GLY A 2 ? UNP A3QGX4 ? ? 'expression tag' -17 2 1 3BHN SER A 3 ? UNP A3QGX4 ? ? 'expression tag' -16 3 1 3BHN ASP A 4 ? UNP A3QGX4 ? ? 'expression tag' -15 4 1 3BHN LYS A 5 ? UNP A3QGX4 ? ? 'expression tag' -14 5 1 3BHN ILE A 6 ? UNP A3QGX4 ? ? 'expression tag' -13 6 1 3BHN HIS A 7 ? UNP A3QGX4 ? ? 'expression tag' -12 7 1 3BHN HIS A 8 ? UNP A3QGX4 ? ? 'expression tag' -11 8 1 3BHN HIS A 9 ? UNP A3QGX4 ? ? 'expression tag' -10 9 1 3BHN HIS A 10 ? UNP A3QGX4 ? ? 'expression tag' -9 10 1 3BHN HIS A 11 ? UNP A3QGX4 ? ? 'expression tag' -8 11 1 3BHN HIS A 12 ? UNP A3QGX4 ? ? 'expression tag' -7 12 1 3BHN GLU A 13 ? UNP A3QGX4 ? ? 'expression tag' -6 13 1 3BHN ASN A 14 ? UNP A3QGX4 ? ? 'expression tag' -5 14 1 3BHN LEU A 15 ? UNP A3QGX4 ? ? 'expression tag' -4 15 1 3BHN TYR A 16 ? UNP A3QGX4 ? ? 'expression tag' -3 16 1 3BHN PHE A 17 ? UNP A3QGX4 ? ? 'expression tag' -2 17 1 3BHN GLN A 18 ? UNP A3QGX4 ? ? 'expression tag' -1 18 1 3BHN GLY A 19 ? UNP A3QGX4 ? ? 'expression tag' 0 19 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3BHN # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.51 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 51.05 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.2 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details 'NANODROP, 0.2M Na Tartrate, 20.0% PEG 3350, No Buffer pH 7.2, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.details ? _diffrn_detector.pdbx_collection_date 2007-10-04 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9537 1.0 2 0.9798 1.0 3 0.9796 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline 8.2.2 _diffrn_source.type 'ALS BEAMLINE 8.2.2' _diffrn_source.pdbx_wavelength_list '0.9537, 0.9798, 0.9796' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ALS # _reflns.entry_id 3BHN _reflns.d_resolution_high 1.76 _reflns.d_resolution_low 29.223 _reflns.number_obs 27863 _reflns.pdbx_Rmerge_I_obs 0.083 _reflns.pdbx_netI_over_sigmaI 13.140 _reflns.percent_possible_obs 99.400 _reflns.B_iso_Wilson_estimate 22.32 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 10.35 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.76 1.82 26238 ? ? 0.806 2.0 ? ? ? ? ? 95.40 1 1 1.82 1.90 31636 ? ? 0.600 2.8 ? ? ? ? ? 100.00 2 1 1.90 1.98 26930 ? ? 0.436 4.0 ? ? ? ? ? 99.90 3 1 1.98 2.09 30581 ? ? 0.290 6.1 ? ? ? ? ? 100.00 4 1 2.09 2.22 28768 ? ? 0.193 8.8 ? ? ? ? ? 100.00 5 1 2.22 2.39 28798 ? ? 0.139 11.8 ? ? ? ? ? 100.00 6 1 2.39 2.63 29162 ? ? 0.101 15.3 ? ? ? ? ? 100.00 7 1 2.63 3.01 28919 ? ? 0.072 20.0 ? ? ? ? ? 99.90 8 1 3.01 3.78 28654 ? ? 0.050 27.6 ? ? ? ? ? 100.00 9 1 3.78 29.223 28499 ? ? 0.044 32.6 ? ? ? ? ? 99.00 10 1 # _refine.entry_id 3BHN _refine.ls_d_res_high 1.760 _refine.ls_d_res_low 29.223 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.880 _refine.ls_number_reflns_obs 27782 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 4. 1,2-ETHANEDIOL MOLECULES FROM THE CRYSTALLIZATION CONDITIONS HAVE BEEN MODELED IN THE SOLVENT STRUCTURE. ; _refine.ls_R_factor_obs 0.163 _refine.ls_R_factor_R_work 0.162 _refine.ls_R_factor_R_free 0.190 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1398 _refine.B_iso_mean 18.478 _refine.aniso_B[1][1] 0.590 _refine.aniso_B[2][2] 0.590 _refine.aniso_B[3][3] -0.890 _refine.aniso_B[1][2] 0.300 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.967 _refine.correlation_coeff_Fo_to_Fc_free 0.956 _refine.pdbx_overall_ESU_R 0.092 _refine.pdbx_overall_ESU_R_Free 0.091 _refine.overall_SU_ML 0.061 _refine.overall_SU_B 3.797 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1604 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 204 _refine_hist.number_atoms_total 1820 _refine_hist.d_res_high 1.760 _refine_hist.d_res_low 29.223 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1728 0.015 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1133 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2360 1.397 1.972 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2815 0.984 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 242 4.968 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 70 37.769 25.714 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 301 12.681 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 5 20.813 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 279 0.092 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1960 0.005 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 323 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 351 0.213 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1195 0.192 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 847 0.174 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 857 0.089 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 165 0.177 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 14 0.169 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 24 0.158 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 18 0.219 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1185 1.862 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 456 0.461 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1790 2.502 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 671 4.785 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 556 6.046 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.76 _refine_ls_shell.d_res_low 1.81 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 98.950 _refine_ls_shell.number_reflns_R_work 1869 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.218 _refine_ls_shell.R_factor_R_free 0.273 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 109 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1978 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3BHN _struct.title 'Crystal structure of a dj-1/pfpi-like protein (shew_2856) from shewanella loihica pv-4 at 1.76 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'Structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, unknown function' _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.entry_id 3BHN # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 32 ? GLY A 44 ? THR A 13 GLY A 25 1 ? 13 HELX_P HELX_P2 2 SER A 76 ? GLN A 81 ? SER A 57 GLN A 62 5 ? 6 HELX_P HELX_P3 3 ARG A 91 ? GLN A 98 ? ARG A 72 GLN A 79 1 ? 8 HELX_P HELX_P4 4 ASP A 99 ? LEU A 106 ? ASP A 80 LEU A 87 1 ? 8 HELX_P HELX_P5 5 ALA A 120 ? LEU A 128 ? ALA A 101 LEU A 109 1 ? 9 HELX_P HELX_P6 6 ASN A 139 ? ASP A 141 ? ASN A 120 ASP A 122 5 ? 3 HELX_P HELX_P7 7 ALA A 142 ? MSE A 149 ? ALA A 123 MSE A 130 1 ? 8 HELX_P HELX_P8 8 GLY A 169 ? LEU A 171 ? GLY A 150 LEU A 152 5 ? 3 HELX_P HELX_P9 9 SER A 172 ? PHE A 185 ? SER A 153 PHE A 166 1 ? 14 HELX_P HELX_P10 10 ASP A 186 ? ASN A 195 ? ASP A 167 ASN A 176 1 ? 10 HELX_P HELX_P11 11 GLN A 202 ? SER A 233 ? GLN A 183 SER A 214 1 ? 32 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 20 C ? ? ? 1_555 A TYR 21 N ? ? A MSE 1 A TYR 2 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale2 covale both ? A LEU 38 C ? ? ? 1_555 A MSE 39 N ? ? A LEU 19 A MSE 20 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale3 covale both ? A MSE 39 C ? ? ? 1_555 A ASN 40 N ? ? A MSE 20 A ASN 21 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale4 covale both ? A GLY 66 C ? ? ? 1_555 A MSE 67 N ? ? A GLY 47 A MSE 48 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale5 covale both ? A MSE 67 C ? ? ? 1_555 A THR 68 N ? ? A MSE 48 A THR 49 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale6 covale both ? A PHE 102 C ? ? ? 1_555 A MSE 103 N ? ? A PHE 83 A MSE 84 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale7 covale both ? A MSE 103 C ? ? ? 1_555 A SER 104 N ? ? A MSE 84 A SER 85 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale8 covale both ? A GLY 148 C ? ? ? 1_555 A MSE 149 N ? ? A GLY 129 A MSE 130 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale9 covale both ? A MSE 149 C ? ? ? 1_555 A GLY 150 N ? ? A MSE 130 A GLY 131 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale10 covale both ? A GLN 202 C ? ? ? 1_555 A MSE 203 N A ? A GLN 183 A MSE 184 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale11 covale both ? A GLN 202 C ? ? ? 1_555 A MSE 203 N B ? A GLN 183 A MSE 184 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale12 covale both ? A MSE 203 C A ? ? 1_555 A GLU 204 N ? ? A MSE 184 A GLU 185 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale13 covale both ? A MSE 203 C B ? ? 1_555 A GLU 204 N ? ? A MSE 184 A GLU 185 1_555 ? ? ? ? ? ? ? 1.329 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 73 ? HIS A 74 ? GLY A 54 HIS A 55 A 2 TRP A 50 ? GLY A 56 ? TRP A 31 GLY A 37 A 3 TYR A 21 ? VAL A 26 ? TYR A 2 VAL A 7 A 4 VAL A 83 ? ILE A 86 ? VAL A 64 ILE A 67 A 5 LEU A 114 ? ILE A 118 ? LEU A 95 ILE A 99 A 6 ILE A 164 ? ALA A 167 ? ILE A 145 ALA A 148 A 7 LEU A 158 ? GLU A 161 ? LEU A 139 GLU A 142 B 1 GLU A 60 ? HIS A 62 ? GLU A 41 HIS A 43 B 2 THR A 68 ? LYS A 70 ? THR A 49 LYS A 51 C 1 LYS A 135 ? LEU A 136 ? LYS A 116 LEU A 117 C 2 ASP A 152 ? VAL A 153 ? ASP A 133 VAL A 134 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLY A 73 ? O GLY A 54 N GLY A 56 ? N GLY A 37 A 2 3 O LEU A 55 ? O LEU A 36 N ILE A 25 ? N ILE A 6 A 3 4 N VAL A 26 ? N VAL A 7 O LEU A 85 ? O LEU A 66 A 4 5 N VAL A 84 ? N VAL A 65 O GLY A 116 ? O GLY A 97 A 5 6 N ILE A 115 ? N ILE A 96 O ALA A 165 ? O ALA A 146 A 6 7 O ILE A 164 ? O ILE A 145 N GLU A 161 ? N GLU A 142 B 1 2 N HIS A 61 ? N HIS A 42 O VAL A 69 ? O VAL A 50 C 1 2 N LEU A 136 ? N LEU A 117 O ASP A 152 ? O ASP A 133 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 218 ? 6 'BINDING SITE FOR RESIDUE EDO A 218' AC2 Software A EDO 219 ? 6 'BINDING SITE FOR RESIDUE EDO A 219' AC3 Software A EDO 220 ? 5 'BINDING SITE FOR RESIDUE EDO A 220' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ARG A 112 ? ARG A 93 . ? 1_555 ? 2 AC1 6 GLN A 113 ? GLN A 94 . ? 1_555 ? 3 AC1 6 LEU A 114 ? LEU A 95 . ? 1_555 ? 4 AC1 6 HOH E . ? HOH A 346 . ? 1_555 ? 5 AC1 6 HOH E . ? HOH A 387 . ? 1_555 ? 6 AC1 6 HOH E . ? HOH A 405 . ? 1_555 ? 7 AC2 6 PHE A 28 ? PHE A 9 . ? 1_555 ? 8 AC2 6 THR A 57 ? THR A 38 . ? 1_555 ? 9 AC2 6 ALA A 96 ? ALA A 77 . ? 1_555 ? 10 AC2 6 ASP A 99 ? ASP A 80 . ? 1_555 ? 11 AC2 6 HOH E . ? HOH A 235 . ? 1_555 ? 12 AC2 6 HOH E . ? HOH A 422 . ? 1_555 ? 13 AC3 5 PHE A 36 ? PHE A 17 . ? 1_555 ? 14 AC3 5 ILE A 54 ? ILE A 35 . ? 1_555 ? 15 AC3 5 HOH E . ? HOH A 335 . ? 1_555 ? 16 AC3 5 HOH E . ? HOH A 379 . ? 12_575 ? 17 AC3 5 HOH E . ? HOH A 424 . ? 1_555 ? # _atom_sites.entry_id 3BHN _atom_sites.fract_transf_matrix[1][1] 0.014021 _atom_sites.fract_transf_matrix[1][2] 0.008095 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016190 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005536 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -18 ? ? ? A . n A 1 2 GLY 2 -17 ? ? ? A . n A 1 3 SER 3 -16 ? ? ? A . n A 1 4 ASP 4 -15 ? ? ? A . n A 1 5 LYS 5 -14 ? ? ? A . n A 1 6 ILE 6 -13 ? ? ? A . n A 1 7 HIS 7 -12 ? ? ? A . n A 1 8 HIS 8 -11 ? ? ? A . n A 1 9 HIS 9 -10 ? ? ? A . n A 1 10 HIS 10 -9 ? ? ? A . n A 1 11 HIS 11 -8 ? ? ? A . n A 1 12 HIS 12 -7 ? ? ? A . n A 1 13 GLU 13 -6 ? ? ? A . n A 1 14 ASN 14 -5 ? ? ? A . n A 1 15 LEU 15 -4 ? ? ? A . n A 1 16 TYR 16 -3 ? ? ? A . n A 1 17 PHE 17 -2 ? ? ? A . n A 1 18 GLN 18 -1 ? ? ? A . n A 1 19 GLY 19 0 ? ? ? A . n A 1 20 MSE 20 1 1 MSE MSE A . n A 1 21 TYR 21 2 2 TYR TYR A . n A 1 22 LYS 22 3 3 LYS LYS A . n A 1 23 VAL 23 4 4 VAL VAL A . n A 1 24 GLY 24 5 5 GLY GLY A . n A 1 25 ILE 25 6 6 ILE ILE A . n A 1 26 VAL 26 7 7 VAL VAL A . n A 1 27 LEU 27 8 8 LEU LEU A . n A 1 28 PHE 28 9 9 PHE PHE A . n A 1 29 ASP 29 10 10 ASP ASP A . n A 1 30 ASP 30 11 11 ASP ASP A . n A 1 31 PHE 31 12 12 PHE PHE A . n A 1 32 THR 32 13 13 THR THR A . n A 1 33 ASP 33 14 14 ASP ASP A . n A 1 34 VAL 34 15 15 VAL VAL A . n A 1 35 ASP 35 16 16 ASP ASP A . n A 1 36 PHE 36 17 17 PHE PHE A . n A 1 37 PHE 37 18 18 PHE PHE A . n A 1 38 LEU 38 19 19 LEU LEU A . n A 1 39 MSE 39 20 20 MSE MSE A . n A 1 40 ASN 40 21 21 ASN ASN A . n A 1 41 ASP 41 22 22 ASP ASP A . n A 1 42 LEU 42 23 23 LEU LEU A . n A 1 43 LEU 43 24 24 LEU LEU A . n A 1 44 GLY 44 25 25 GLY GLY A . n A 1 45 ARG 45 26 26 ARG ARG A . n A 1 46 THR 46 27 27 THR THR A . n A 1 47 SER 47 28 28 SER SER A . n A 1 48 ASP 48 29 29 ASP ASP A . n A 1 49 SER 49 30 30 SER SER A . n A 1 50 TRP 50 31 31 TRP TRP A . n A 1 51 THR 51 32 32 THR THR A . n A 1 52 VAL 52 33 33 VAL VAL A . n A 1 53 ARG 53 34 34 ARG ARG A . n A 1 54 ILE 54 35 35 ILE ILE A . n A 1 55 LEU 55 36 36 LEU LEU A . n A 1 56 GLY 56 37 37 GLY GLY A . n A 1 57 THR 57 38 38 THR THR A . n A 1 58 LYS 58 39 39 LYS LYS A . n A 1 59 PRO 59 40 40 PRO PRO A . n A 1 60 GLU 60 41 41 GLU GLU A . n A 1 61 HIS 61 42 42 HIS HIS A . n A 1 62 HIS 62 43 43 HIS HIS A . n A 1 63 SER 63 44 44 SER SER A . n A 1 64 GLN 64 45 45 GLN GLN A . n A 1 65 LEU 65 46 46 LEU LEU A . n A 1 66 GLY 66 47 47 GLY GLY A . n A 1 67 MSE 67 48 48 MSE MSE A . n A 1 68 THR 68 49 49 THR THR A . n A 1 69 VAL 69 50 50 VAL VAL A . n A 1 70 LYS 70 51 51 LYS LYS A . n A 1 71 THR 71 52 52 THR THR A . n A 1 72 ASP 72 53 53 ASP ASP A . n A 1 73 GLY 73 54 54 GLY GLY A . n A 1 74 HIS 74 55 55 HIS HIS A . n A 1 75 VAL 75 56 56 VAL VAL A . n A 1 76 SER 76 57 57 SER SER A . n A 1 77 GLU 77 58 58 GLU GLU A . n A 1 78 VAL 78 59 59 VAL VAL A . n A 1 79 LYS 79 60 60 LYS LYS A . n A 1 80 GLU 80 61 61 GLU GLU A . n A 1 81 GLN 81 62 62 GLN GLN A . n A 1 82 ASP 82 63 63 ASP ASP A . n A 1 83 VAL 83 64 64 VAL VAL A . n A 1 84 VAL 84 65 65 VAL VAL A . n A 1 85 LEU 85 66 66 LEU LEU A . n A 1 86 ILE 86 67 67 ILE ILE A . n A 1 87 THR 87 68 68 THR THR A . n A 1 88 SER 88 69 69 SER SER A . n A 1 89 GLY 89 70 70 GLY GLY A . n A 1 90 TYR 90 71 71 TYR TYR A . n A 1 91 ARG 91 72 72 ARG ARG A . n A 1 92 GLY 92 73 73 GLY GLY A . n A 1 93 ILE 93 74 74 ILE ILE A . n A 1 94 PRO 94 75 75 PRO PRO A . n A 1 95 ALA 95 76 76 ALA ALA A . n A 1 96 ALA 96 77 77 ALA ALA A . n A 1 97 LEU 97 78 78 LEU LEU A . n A 1 98 GLN 98 79 79 GLN GLN A . n A 1 99 ASP 99 80 80 ASP ASP A . n A 1 100 GLU 100 81 81 GLU GLU A . n A 1 101 ASN 101 82 82 ASN ASN A . n A 1 102 PHE 102 83 83 PHE PHE A . n A 1 103 MSE 103 84 84 MSE MSE A . n A 1 104 SER 104 85 85 SER SER A . n A 1 105 ALA 105 86 86 ALA ALA A . n A 1 106 LEU 106 87 87 LEU LEU A . n A 1 107 LYS 107 88 88 LYS LYS A . n A 1 108 LEU 108 89 89 LEU LEU A . n A 1 109 ASP 109 90 90 ASP ASP A . n A 1 110 PRO 110 91 91 PRO PRO A . n A 1 111 SER 111 92 92 SER SER A . n A 1 112 ARG 112 93 93 ARG ARG A . n A 1 113 GLN 113 94 94 GLN GLN A . n A 1 114 LEU 114 95 95 LEU LEU A . n A 1 115 ILE 115 96 96 ILE ILE A . n A 1 116 GLY 116 97 97 GLY GLY A . n A 1 117 SER 117 98 98 SER SER A . n A 1 118 ILE 118 99 99 ILE ILE A . n A 1 119 CYS 119 100 100 CYS CYS A . n A 1 120 ALA 120 101 101 ALA ALA A . n A 1 121 GLY 121 102 102 GLY GLY A . n A 1 122 SER 122 103 103 SER SER A . n A 1 123 PHE 123 104 104 PHE PHE A . n A 1 124 VAL 124 105 105 VAL VAL A . n A 1 125 LEU 125 106 106 LEU LEU A . n A 1 126 HIS 126 107 107 HIS HIS A . n A 1 127 GLU 127 108 108 GLU GLU A . n A 1 128 LEU 128 109 109 LEU LEU A . n A 1 129 GLY 129 110 110 GLY GLY A . n A 1 130 LEU 130 111 111 LEU LEU A . n A 1 131 LEU 131 112 112 LEU LEU A . n A 1 132 LYS 132 113 113 LYS LYS A . n A 1 133 GLY 133 114 114 GLY GLY A . n A 1 134 LYS 134 115 115 LYS LYS A . n A 1 135 LYS 135 116 116 LYS LYS A . n A 1 136 LEU 136 117 117 LEU LEU A . n A 1 137 THR 137 118 118 THR THR A . n A 1 138 THR 138 119 119 THR THR A . n A 1 139 ASN 139 120 120 ASN ASN A . n A 1 140 PRO 140 121 121 PRO PRO A . n A 1 141 ASP 141 122 122 ASP ASP A . n A 1 142 ALA 142 123 123 ALA ALA A . n A 1 143 LYS 143 124 124 LYS LYS A . n A 1 144 ALA 144 125 125 ALA ALA A . n A 1 145 VAL 145 126 126 VAL VAL A . n A 1 146 LEU 146 127 127 LEU LEU A . n A 1 147 GLN 147 128 128 GLN GLN A . n A 1 148 GLY 148 129 129 GLY GLY A . n A 1 149 MSE 149 130 130 MSE MSE A . n A 1 150 GLY 150 131 131 GLY GLY A . n A 1 151 GLY 151 132 132 GLY GLY A . n A 1 152 ASP 152 133 133 ASP ASP A . n A 1 153 VAL 153 134 134 VAL VAL A . n A 1 154 GLN 154 135 135 GLN GLN A . n A 1 155 ASP 155 136 136 ASP ASP A . n A 1 156 LEU 156 137 137 LEU LEU A . n A 1 157 PRO 157 138 138 PRO PRO A . n A 1 158 LEU 158 139 139 LEU LEU A . n A 1 159 VAL 159 140 140 VAL VAL A . n A 1 160 ILE 160 141 141 ILE ILE A . n A 1 161 GLU 161 142 142 GLU GLU A . n A 1 162 GLY 162 143 143 GLY GLY A . n A 1 163 ASN 163 144 144 ASN ASN A . n A 1 164 ILE 164 145 145 ILE ILE A . n A 1 165 ALA 165 146 146 ALA ALA A . n A 1 166 THR 166 147 147 THR THR A . n A 1 167 ALA 167 148 148 ALA ALA A . n A 1 168 GLY 168 149 149 GLY GLY A . n A 1 169 GLY 169 150 150 GLY GLY A . n A 1 170 CYS 170 151 151 CYS CYS A . n A 1 171 LEU 171 152 152 LEU LEU A . n A 1 172 SER 172 153 153 SER SER A . n A 1 173 LEU 173 154 154 LEU LEU A . n A 1 174 LEU 174 155 155 LEU LEU A . n A 1 175 TYR 175 156 156 TYR TYR A . n A 1 176 LEU 176 157 157 LEU LEU A . n A 1 177 VAL 177 158 158 VAL VAL A . n A 1 178 GLY 178 159 159 GLY GLY A . n A 1 179 TRP 179 160 160 TRP TRP A . n A 1 180 LEU 180 161 161 LEU LEU A . n A 1 181 ALA 181 162 162 ALA ALA A . n A 1 182 GLU 182 163 163 GLU GLU A . n A 1 183 ARG 183 164 164 ARG ARG A . n A 1 184 LEU 184 165 165 LEU LEU A . n A 1 185 PHE 185 166 166 PHE PHE A . n A 1 186 ASP 186 167 167 ASP ASP A . n A 1 187 SER 187 168 168 SER SER A . n A 1 188 VAL 188 169 169 VAL VAL A . n A 1 189 LYS 189 170 170 LYS LYS A . n A 1 190 ARG 190 171 171 ARG ARG A . n A 1 191 LYS 191 172 172 LYS LYS A . n A 1 192 GLN 192 173 173 GLN GLN A . n A 1 193 ILE 193 174 174 ILE ILE A . n A 1 194 GLN 194 175 175 GLN GLN A . n A 1 195 ASN 195 176 176 ASN ASN A . n A 1 196 GLN 196 177 177 GLN GLN A . n A 1 197 LEU 197 178 178 LEU LEU A . n A 1 198 ILE 198 179 179 ILE ILE A . n A 1 199 PRO 199 180 180 PRO PRO A . n A 1 200 ALA 200 181 181 ALA ALA A . n A 1 201 GLY 201 182 182 GLY GLY A . n A 1 202 GLN 202 183 183 GLN GLN A . n A 1 203 MSE 203 184 184 MSE MSE A . n A 1 204 GLU 204 185 185 GLU GLU A . n A 1 205 ILE 205 186 186 ILE ILE A . n A 1 206 PHE 206 187 187 PHE PHE A . n A 1 207 GLU 207 188 188 GLU GLU A . n A 1 208 THR 208 189 189 THR THR A . n A 1 209 LEU 209 190 190 LEU LEU A . n A 1 210 ILE 210 191 191 ILE ILE A . n A 1 211 SER 211 192 192 SER SER A . n A 1 212 GLU 212 193 193 GLU GLU A . n A 1 213 THR 213 194 194 THR THR A . n A 1 214 ILE 214 195 195 ILE ILE A . n A 1 215 GLN 215 196 196 GLN GLN A . n A 1 216 SER 216 197 197 SER SER A . n A 1 217 ALA 217 198 198 ALA ALA A . n A 1 218 GLU 218 199 199 GLU GLU A . n A 1 219 SER 219 200 200 SER SER A . n A 1 220 ALA 220 201 201 ALA ALA A . n A 1 221 TYR 221 202 202 TYR TYR A . n A 1 222 GLU 222 203 203 GLU GLU A . n A 1 223 TYR 223 204 204 TYR TYR A . n A 1 224 ARG 224 205 205 ARG ARG A . n A 1 225 SER 225 206 206 SER SER A . n A 1 226 ALA 226 207 207 ALA ALA A . n A 1 227 CYS 227 208 208 CYS CYS A . n A 1 228 GLU 228 209 209 GLU GLU A . n A 1 229 SER 229 210 210 SER SER A . n A 1 230 ASP 230 211 211 ASP ASP A . n A 1 231 ALA 231 212 212 ALA ALA A . n A 1 232 GLU 232 213 213 GLU GLU A . n A 1 233 SER 233 214 214 SER SER A . n A 1 234 LEU 234 215 ? ? ? A . n A 1 235 VAL 235 216 ? ? ? A . n A 1 236 VAL 236 217 ? ? ? A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 218 1 EDO EDO A . C 2 EDO 1 219 2 EDO EDO A . D 2 EDO 1 220 3 EDO EDO A . E 3 HOH 1 221 4 HOH HOH A . E 3 HOH 2 222 5 HOH HOH A . E 3 HOH 3 223 6 HOH HOH A . E 3 HOH 4 224 7 HOH HOH A . E 3 HOH 5 225 8 HOH HOH A . E 3 HOH 6 226 9 HOH HOH A . E 3 HOH 7 227 10 HOH HOH A . E 3 HOH 8 228 11 HOH HOH A . E 3 HOH 9 229 12 HOH HOH A . E 3 HOH 10 230 13 HOH HOH A . E 3 HOH 11 231 14 HOH HOH A . E 3 HOH 12 232 15 HOH HOH A . E 3 HOH 13 233 16 HOH HOH A . E 3 HOH 14 234 17 HOH HOH A . E 3 HOH 15 235 18 HOH HOH A . E 3 HOH 16 236 19 HOH HOH A . E 3 HOH 17 237 20 HOH HOH A . E 3 HOH 18 238 21 HOH HOH A . E 3 HOH 19 239 22 HOH HOH A . E 3 HOH 20 240 23 HOH HOH A . E 3 HOH 21 241 24 HOH HOH A . E 3 HOH 22 242 25 HOH HOH A . E 3 HOH 23 243 26 HOH HOH A . E 3 HOH 24 244 27 HOH HOH A . E 3 HOH 25 245 28 HOH HOH A . E 3 HOH 26 246 29 HOH HOH A . E 3 HOH 27 247 30 HOH HOH A . E 3 HOH 28 248 31 HOH HOH A . E 3 HOH 29 249 32 HOH HOH A . E 3 HOH 30 250 33 HOH HOH A . E 3 HOH 31 251 34 HOH HOH A . E 3 HOH 32 252 35 HOH HOH A . E 3 HOH 33 253 36 HOH HOH A . E 3 HOH 34 254 37 HOH HOH A . E 3 HOH 35 255 38 HOH HOH A . E 3 HOH 36 256 39 HOH HOH A . E 3 HOH 37 257 40 HOH HOH A . E 3 HOH 38 258 41 HOH HOH A . E 3 HOH 39 259 42 HOH HOH A . E 3 HOH 40 260 43 HOH HOH A . E 3 HOH 41 261 44 HOH HOH A . E 3 HOH 42 262 45 HOH HOH A . E 3 HOH 43 263 46 HOH HOH A . E 3 HOH 44 264 47 HOH HOH A . E 3 HOH 45 265 48 HOH HOH A . E 3 HOH 46 266 49 HOH HOH A . E 3 HOH 47 267 50 HOH HOH A . E 3 HOH 48 268 51 HOH HOH A . E 3 HOH 49 269 52 HOH HOH A . E 3 HOH 50 270 53 HOH HOH A . E 3 HOH 51 271 54 HOH HOH A . E 3 HOH 52 272 55 HOH HOH A . E 3 HOH 53 273 56 HOH HOH A . E 3 HOH 54 274 57 HOH HOH A . E 3 HOH 55 275 58 HOH HOH A . E 3 HOH 56 276 59 HOH HOH A . E 3 HOH 57 277 60 HOH HOH A . E 3 HOH 58 278 61 HOH HOH A . E 3 HOH 59 279 62 HOH HOH A . E 3 HOH 60 280 63 HOH HOH A . E 3 HOH 61 281 64 HOH HOH A . E 3 HOH 62 282 65 HOH HOH A . E 3 HOH 63 283 66 HOH HOH A . E 3 HOH 64 284 67 HOH HOH A . E 3 HOH 65 285 68 HOH HOH A . E 3 HOH 66 286 69 HOH HOH A . E 3 HOH 67 287 70 HOH HOH A . E 3 HOH 68 288 71 HOH HOH A . E 3 HOH 69 289 72 HOH HOH A . E 3 HOH 70 290 73 HOH HOH A . E 3 HOH 71 291 74 HOH HOH A . E 3 HOH 72 292 75 HOH HOH A . E 3 HOH 73 293 76 HOH HOH A . E 3 HOH 74 294 77 HOH HOH A . E 3 HOH 75 295 78 HOH HOH A . E 3 HOH 76 296 79 HOH HOH A . E 3 HOH 77 297 80 HOH HOH A . E 3 HOH 78 298 81 HOH HOH A . E 3 HOH 79 299 82 HOH HOH A . E 3 HOH 80 300 83 HOH HOH A . E 3 HOH 81 301 84 HOH HOH A . E 3 HOH 82 302 85 HOH HOH A . E 3 HOH 83 303 86 HOH HOH A . E 3 HOH 84 304 87 HOH HOH A . E 3 HOH 85 305 88 HOH HOH A . E 3 HOH 86 306 89 HOH HOH A . E 3 HOH 87 307 90 HOH HOH A . E 3 HOH 88 308 91 HOH HOH A . E 3 HOH 89 309 92 HOH HOH A . E 3 HOH 90 310 93 HOH HOH A . E 3 HOH 91 311 94 HOH HOH A . E 3 HOH 92 312 95 HOH HOH A . E 3 HOH 93 313 96 HOH HOH A . E 3 HOH 94 314 97 HOH HOH A . E 3 HOH 95 315 98 HOH HOH A . E 3 HOH 96 316 99 HOH HOH A . E 3 HOH 97 317 100 HOH HOH A . E 3 HOH 98 318 101 HOH HOH A . E 3 HOH 99 319 102 HOH HOH A . E 3 HOH 100 320 103 HOH HOH A . E 3 HOH 101 321 104 HOH HOH A . E 3 HOH 102 322 105 HOH HOH A . E 3 HOH 103 323 106 HOH HOH A . E 3 HOH 104 324 107 HOH HOH A . E 3 HOH 105 325 108 HOH HOH A . E 3 HOH 106 326 109 HOH HOH A . E 3 HOH 107 327 110 HOH HOH A . E 3 HOH 108 328 111 HOH HOH A . E 3 HOH 109 329 112 HOH HOH A . E 3 HOH 110 330 113 HOH HOH A . E 3 HOH 111 331 114 HOH HOH A . E 3 HOH 112 332 115 HOH HOH A . E 3 HOH 113 333 116 HOH HOH A . E 3 HOH 114 334 117 HOH HOH A . E 3 HOH 115 335 118 HOH HOH A . E 3 HOH 116 336 119 HOH HOH A . E 3 HOH 117 337 120 HOH HOH A . E 3 HOH 118 338 121 HOH HOH A . E 3 HOH 119 339 122 HOH HOH A . E 3 HOH 120 340 123 HOH HOH A . E 3 HOH 121 341 124 HOH HOH A . E 3 HOH 122 342 125 HOH HOH A . E 3 HOH 123 343 126 HOH HOH A . E 3 HOH 124 344 127 HOH HOH A . E 3 HOH 125 345 128 HOH HOH A . E 3 HOH 126 346 129 HOH HOH A . E 3 HOH 127 347 130 HOH HOH A . E 3 HOH 128 348 131 HOH HOH A . E 3 HOH 129 349 132 HOH HOH A . E 3 HOH 130 350 133 HOH HOH A . E 3 HOH 131 351 134 HOH HOH A . E 3 HOH 132 352 135 HOH HOH A . E 3 HOH 133 353 136 HOH HOH A . E 3 HOH 134 354 137 HOH HOH A . E 3 HOH 135 355 138 HOH HOH A . E 3 HOH 136 356 139 HOH HOH A . E 3 HOH 137 357 140 HOH HOH A . E 3 HOH 138 358 141 HOH HOH A . E 3 HOH 139 359 142 HOH HOH A . E 3 HOH 140 360 143 HOH HOH A . E 3 HOH 141 361 144 HOH HOH A . E 3 HOH 142 362 145 HOH HOH A . E 3 HOH 143 363 146 HOH HOH A . E 3 HOH 144 364 147 HOH HOH A . E 3 HOH 145 365 148 HOH HOH A . E 3 HOH 146 366 149 HOH HOH A . E 3 HOH 147 367 150 HOH HOH A . E 3 HOH 148 368 151 HOH HOH A . E 3 HOH 149 369 152 HOH HOH A . E 3 HOH 150 370 153 HOH HOH A . E 3 HOH 151 371 154 HOH HOH A . E 3 HOH 152 372 155 HOH HOH A . E 3 HOH 153 373 156 HOH HOH A . E 3 HOH 154 374 157 HOH HOH A . E 3 HOH 155 375 158 HOH HOH A . E 3 HOH 156 376 159 HOH HOH A . E 3 HOH 157 377 160 HOH HOH A . E 3 HOH 158 378 161 HOH HOH A . E 3 HOH 159 379 162 HOH HOH A . E 3 HOH 160 380 163 HOH HOH A . E 3 HOH 161 381 164 HOH HOH A . E 3 HOH 162 382 165 HOH HOH A . E 3 HOH 163 383 166 HOH HOH A . E 3 HOH 164 384 167 HOH HOH A . E 3 HOH 165 385 168 HOH HOH A . E 3 HOH 166 386 169 HOH HOH A . E 3 HOH 167 387 170 HOH HOH A . E 3 HOH 168 388 171 HOH HOH A . E 3 HOH 169 389 172 HOH HOH A . E 3 HOH 170 390 173 HOH HOH A . E 3 HOH 171 391 174 HOH HOH A . E 3 HOH 172 392 175 HOH HOH A . E 3 HOH 173 393 176 HOH HOH A . E 3 HOH 174 394 177 HOH HOH A . E 3 HOH 175 395 178 HOH HOH A . E 3 HOH 176 396 179 HOH HOH A . E 3 HOH 177 397 180 HOH HOH A . E 3 HOH 178 398 181 HOH HOH A . E 3 HOH 179 399 182 HOH HOH A . E 3 HOH 180 400 183 HOH HOH A . E 3 HOH 181 401 184 HOH HOH A . E 3 HOH 182 402 185 HOH HOH A . E 3 HOH 183 403 186 HOH HOH A . E 3 HOH 184 404 187 HOH HOH A . E 3 HOH 185 405 188 HOH HOH A . E 3 HOH 186 406 189 HOH HOH A . E 3 HOH 187 407 190 HOH HOH A . E 3 HOH 188 408 191 HOH HOH A . E 3 HOH 189 409 192 HOH HOH A . E 3 HOH 190 410 193 HOH HOH A . E 3 HOH 191 411 194 HOH HOH A . E 3 HOH 192 412 195 HOH HOH A . E 3 HOH 193 413 196 HOH HOH A . E 3 HOH 194 414 197 HOH HOH A . E 3 HOH 195 415 198 HOH HOH A . E 3 HOH 196 416 199 HOH HOH A . E 3 HOH 197 417 200 HOH HOH A . E 3 HOH 198 418 201 HOH HOH A . E 3 HOH 199 419 202 HOH HOH A . E 3 HOH 200 420 203 HOH HOH A . E 3 HOH 201 421 204 HOH HOH A . E 3 HOH 202 422 205 HOH HOH A . E 3 HOH 203 423 206 HOH HOH A . E 3 HOH 204 424 207 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 20 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 39 A MSE 20 ? MET SELENOMETHIONINE 3 A MSE 67 A MSE 48 ? MET SELENOMETHIONINE 4 A MSE 103 A MSE 84 ? MET SELENOMETHIONINE 5 A MSE 149 A MSE 130 ? MET SELENOMETHIONINE 6 A MSE 203 A MSE 184 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_assembly_prop.biol_id 1 _pdbx_struct_assembly_prop.type 'ABSA (A^2)' _pdbx_struct_assembly_prop.value 2610 _pdbx_struct_assembly_prop.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 12_575 x,x-y+2,-z+1/6 0.5000000000 0.8660254038 0.0000000000 -71.3200000000 0.8660254038 -0.5000000000 0.0000000000 123.5298635958 0.0000000000 0.0000000000 -1.0000000000 30.1050000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-12-11 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' software 3 4 'Structure model' struct_conn 4 5 'Structure model' database_2 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined -8.4506 65.3131 23.1685 -0.0127 -0.0462 -0.0284 -0.0107 -0.0453 0.0377 1.1771 1.5381 1.0973 -0.0202 0.3503 -0.7110 0.0337 0.1154 -0.1491 0.0231 -0.0758 0.1004 -0.0640 0.0917 -0.1528 'X-RAY DIFFRACTION' 2 ? refined 2.6618 72.8180 32.5279 0.0152 -0.0514 -0.0479 -0.0024 -0.0538 0.0140 1.2614 1.2876 1.4684 0.4210 -0.0549 -0.3008 0.0464 0.0081 -0.0546 -0.1459 -0.0033 -0.0895 0.2490 -0.0980 0.0030 'X-RAY DIFFRACTION' 3 ? refined 11.1304 73.6973 18.9981 -0.0278 -0.0158 0.0050 0.0201 -0.0261 0.0127 0.9434 1.0057 0.8699 0.0503 0.4371 -0.1668 0.0701 -0.1076 0.0375 0.1454 -0.0353 -0.2168 0.0364 0.0920 0.1515 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 20 A 107 ? A 1 A 88 'X-RAY DIFFRACTION' ? 2 2 A 108 A 171 ? A 89 A 152 'X-RAY DIFFRACTION' ? 3 3 A 172 A 233 ? A 153 A 214 'X-RAY DIFFRACTION' ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SOLVE . ? package 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/xscale_program.html ? ? 5 PDB_EXTRACT 3.000 'July 2, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 6 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? 8 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ; SEQUENCE THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. ; # _pdbx_entry_details.entry_id 3BHN _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;REMARK 999 SEQUENCE: THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 34 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 34 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 34 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 117.29 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -3.01 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 100 ? ? 47.90 -124.81 2 1 PHE A 166 ? ? -129.66 -111.13 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 3 ? CE ? A LYS 22 CE 2 1 Y 1 A LYS 3 ? NZ ? A LYS 22 NZ 3 1 Y 1 A GLN 45 ? CD ? A GLN 64 CD 4 1 Y 1 A GLN 45 ? OE1 ? A GLN 64 OE1 5 1 Y 1 A GLN 45 ? NE2 ? A GLN 64 NE2 6 1 Y 1 A LYS 51 ? CE ? A LYS 70 CE 7 1 Y 1 A LYS 51 ? NZ ? A LYS 70 NZ 8 1 Y 1 A ARG 72 ? CD ? A ARG 91 CD 9 1 Y 1 A ARG 72 ? NE ? A ARG 91 NE 10 1 Y 1 A ARG 72 ? CZ ? A ARG 91 CZ 11 1 Y 1 A ARG 72 ? NH1 ? A ARG 91 NH1 12 1 Y 1 A ARG 72 ? NH2 ? A ARG 91 NH2 13 1 Y 1 A GLN 79 ? OE1 ? A GLN 98 OE1 14 1 Y 1 A GLN 79 ? NE2 ? A GLN 98 NE2 15 1 Y 1 A GLU 81 ? CG ? A GLU 100 CG 16 1 Y 1 A GLU 81 ? CD ? A GLU 100 CD 17 1 Y 1 A GLU 81 ? OE1 ? A GLU 100 OE1 18 1 Y 1 A GLU 81 ? OE2 ? A GLU 100 OE2 19 1 Y 1 A ARG 93 ? CD ? A ARG 112 CD 20 1 Y 1 A ARG 93 ? NE ? A ARG 112 NE 21 1 Y 1 A ARG 93 ? CZ ? A ARG 112 CZ 22 1 Y 1 A ARG 93 ? NH1 ? A ARG 112 NH1 23 1 Y 1 A ARG 93 ? NH2 ? A ARG 112 NH2 24 1 Y 1 A LYS 113 ? CD ? A LYS 132 CD 25 1 Y 1 A LYS 113 ? CE ? A LYS 132 CE 26 1 Y 1 A LYS 113 ? NZ ? A LYS 132 NZ 27 1 Y 1 A LYS 124 ? NZ ? A LYS 143 NZ 28 1 Y 1 A GLU 185 ? CG ? A GLU 204 CG 29 1 Y 1 A GLU 185 ? CD ? A GLU 204 CD 30 1 Y 1 A GLU 185 ? OE1 ? A GLU 204 OE1 31 1 Y 1 A GLU 185 ? OE2 ? A GLU 204 OE2 32 1 Y 1 A GLN 196 ? CD ? A GLN 215 CD 33 1 Y 1 A GLN 196 ? OE1 ? A GLN 215 OE1 34 1 Y 1 A GLN 196 ? NE2 ? A GLN 215 NE2 35 1 Y 1 A GLU 213 ? CG ? A GLU 232 CG 36 1 Y 1 A GLU 213 ? CD ? A GLU 232 CD 37 1 Y 1 A GLU 213 ? OE1 ? A GLU 232 OE1 38 1 Y 1 A GLU 213 ? OE2 ? A GLU 232 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -18 ? A MSE 1 2 1 Y 1 A GLY -17 ? A GLY 2 3 1 Y 1 A SER -16 ? A SER 3 4 1 Y 1 A ASP -15 ? A ASP 4 5 1 Y 1 A LYS -14 ? A LYS 5 6 1 Y 1 A ILE -13 ? A ILE 6 7 1 Y 1 A HIS -12 ? A HIS 7 8 1 Y 1 A HIS -11 ? A HIS 8 9 1 Y 1 A HIS -10 ? A HIS 9 10 1 Y 1 A HIS -9 ? A HIS 10 11 1 Y 1 A HIS -8 ? A HIS 11 12 1 Y 1 A HIS -7 ? A HIS 12 13 1 Y 1 A GLU -6 ? A GLU 13 14 1 Y 1 A ASN -5 ? A ASN 14 15 1 Y 1 A LEU -4 ? A LEU 15 16 1 Y 1 A TYR -3 ? A TYR 16 17 1 Y 1 A PHE -2 ? A PHE 17 18 1 Y 1 A GLN -1 ? A GLN 18 19 1 Y 1 A GLY 0 ? A GLY 19 20 1 Y 1 A LEU 215 ? A LEU 234 21 1 Y 1 A VAL 216 ? A VAL 235 22 1 Y 1 A VAL 217 ? A VAL 236 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 water HOH #