data_3BI7 # _entry.id 3BI7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3BI7 RCSB RCSB045552 WWPDB D_1000045552 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2FAZ _pdbx_database_related.details 'UBIQUITIN-LIKE DOMAIN OF HUMAN NUCLEAR ZINC FINGER PROTEIN NP95' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3BI7 _pdbx_database_status.recvd_initial_deposition_date 2007-11-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Walker, J.R.' 1 'Avvakumov, G.V.' 2 'Xue, S.' 3 'Li, Y.' 4 'Weigelt, J.' 5 'Arrowsmith, C.H.' 6 'Edwards, A.M.' 7 'Bochkarev, A.' 8 'Dhe-Paganon, S.' 9 'Structural Genomics Consortium (SGC)' 10 # _citation.id primary _citation.title 'Structural basis for recognition of hemi-methylated DNA by the SRA domain of human UHRF1.' _citation.journal_abbrev Nature _citation.journal_volume 455 _citation.page_first 822 _citation.page_last 826 _citation.year 2008 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18772889 _citation.pdbx_database_id_DOI 10.1038/nature07273 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Avvakumov, G.V.' 1 primary 'Walker, J.R.' 2 primary 'Xue, S.' 3 primary 'Li, Y.' 4 primary 'Duan, S.' 5 primary 'Bronner, C.' 6 primary 'Arrowsmith, C.H.' 7 primary 'Dhe-Paganon, S.' 8 # _cell.entry_id 3BI7 _cell.length_a 65.975 _cell.length_b 65.975 _cell.length_c 96.061 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3BI7 _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'E3 ubiquitin-protein ligase UHRF1' 23910.240 1 6.3.2.- ? 'SRA Domain: Residues 414-617' ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 4 ? ? ? ? 4 non-polymer syn 'UNKNOWN LIGAND' ? 1 ? ? ? ? 5 water nat water 18.015 209 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Ubiquitin-like PHD and RING finger domain-containing protein 1, Ubiquitin-like-containing PHD and RING finger domains protein 1, Inverted CCAAT box-binding protein of 90 kDa, Transcription factor ICBP90, Nuclear zinc finger protein Np95, Nuclear protein 95, HuNp95, RING finger protein 106 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)PSNHYGPIPGIPVGT(MSE)WRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDHGNFFTYTGSGGR DLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKPVRVVRNVKGGKNSKYAPAEGNRYDGIYKVVKY WPEKGKSGFLVWRYLLRRDDDEPGPWTKEGKDRIKKLGLT(MSE)QYPEGYLEALANAHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MPSNHYGPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDHGNFFTYTGSGGRDLSGNKRT AEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKPVRVVRNVKGGKNSKYAPAEGNRYDGIYKVVKYWPEKGKSG FLVWRYLLRRDDDEPGPWTKEGKDRIKKLGLTMQYPEGYLEALANAHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 PRO n 1 3 SER n 1 4 ASN n 1 5 HIS n 1 6 TYR n 1 7 GLY n 1 8 PRO n 1 9 ILE n 1 10 PRO n 1 11 GLY n 1 12 ILE n 1 13 PRO n 1 14 VAL n 1 15 GLY n 1 16 THR n 1 17 MSE n 1 18 TRP n 1 19 ARG n 1 20 PHE n 1 21 ARG n 1 22 VAL n 1 23 GLN n 1 24 VAL n 1 25 SER n 1 26 GLU n 1 27 SER n 1 28 GLY n 1 29 VAL n 1 30 HIS n 1 31 ARG n 1 32 PRO n 1 33 HIS n 1 34 VAL n 1 35 ALA n 1 36 GLY n 1 37 ILE n 1 38 HIS n 1 39 GLY n 1 40 ARG n 1 41 SER n 1 42 ASN n 1 43 ASP n 1 44 GLY n 1 45 ALA n 1 46 TYR n 1 47 SER n 1 48 LEU n 1 49 VAL n 1 50 LEU n 1 51 ALA n 1 52 GLY n 1 53 GLY n 1 54 TYR n 1 55 GLU n 1 56 ASP n 1 57 ASP n 1 58 VAL n 1 59 ASP n 1 60 HIS n 1 61 GLY n 1 62 ASN n 1 63 PHE n 1 64 PHE n 1 65 THR n 1 66 TYR n 1 67 THR n 1 68 GLY n 1 69 SER n 1 70 GLY n 1 71 GLY n 1 72 ARG n 1 73 ASP n 1 74 LEU n 1 75 SER n 1 76 GLY n 1 77 ASN n 1 78 LYS n 1 79 ARG n 1 80 THR n 1 81 ALA n 1 82 GLU n 1 83 GLN n 1 84 SER n 1 85 CYS n 1 86 ASP n 1 87 GLN n 1 88 LYS n 1 89 LEU n 1 90 THR n 1 91 ASN n 1 92 THR n 1 93 ASN n 1 94 ARG n 1 95 ALA n 1 96 LEU n 1 97 ALA n 1 98 LEU n 1 99 ASN n 1 100 CYS n 1 101 PHE n 1 102 ALA n 1 103 PRO n 1 104 ILE n 1 105 ASN n 1 106 ASP n 1 107 GLN n 1 108 GLU n 1 109 GLY n 1 110 ALA n 1 111 GLU n 1 112 ALA n 1 113 LYS n 1 114 ASP n 1 115 TRP n 1 116 ARG n 1 117 SER n 1 118 GLY n 1 119 LYS n 1 120 PRO n 1 121 VAL n 1 122 ARG n 1 123 VAL n 1 124 VAL n 1 125 ARG n 1 126 ASN n 1 127 VAL n 1 128 LYS n 1 129 GLY n 1 130 GLY n 1 131 LYS n 1 132 ASN n 1 133 SER n 1 134 LYS n 1 135 TYR n 1 136 ALA n 1 137 PRO n 1 138 ALA n 1 139 GLU n 1 140 GLY n 1 141 ASN n 1 142 ARG n 1 143 TYR n 1 144 ASP n 1 145 GLY n 1 146 ILE n 1 147 TYR n 1 148 LYS n 1 149 VAL n 1 150 VAL n 1 151 LYS n 1 152 TYR n 1 153 TRP n 1 154 PRO n 1 155 GLU n 1 156 LYS n 1 157 GLY n 1 158 LYS n 1 159 SER n 1 160 GLY n 1 161 PHE n 1 162 LEU n 1 163 VAL n 1 164 TRP n 1 165 ARG n 1 166 TYR n 1 167 LEU n 1 168 LEU n 1 169 ARG n 1 170 ARG n 1 171 ASP n 1 172 ASP n 1 173 ASP n 1 174 GLU n 1 175 PRO n 1 176 GLY n 1 177 PRO n 1 178 TRP n 1 179 THR n 1 180 LYS n 1 181 GLU n 1 182 GLY n 1 183 LYS n 1 184 ASP n 1 185 ARG n 1 186 ILE n 1 187 LYS n 1 188 LYS n 1 189 LEU n 1 190 GLY n 1 191 LEU n 1 192 THR n 1 193 MSE n 1 194 GLN n 1 195 TYR n 1 196 PRO n 1 197 GLU n 1 198 GLY n 1 199 TYR n 1 200 LEU n 1 201 GLU n 1 202 ALA n 1 203 LEU n 1 204 ALA n 1 205 ASN n 1 206 ALA n 1 207 HIS n 1 208 HIS n 1 209 HIS n 1 210 HIS n 1 211 HIS n 1 212 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'UHRF1, ICBP90, NP95, RNF106' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pNIC-CH _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code UHRF1_HUMAN _struct_ref.pdbx_db_accession Q96T88 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PSNHYGPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDHGNFFTYTGSGGRDLSGNKRTA EQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKPVRVVRNVKGGKNSKYAPAEGNRYDGIYKVVKYWPEKGKSGF LVWRYLLRRDDDEPGPWTKEGKDRIKKLGLTMQYPEGYLEALAN ; _struct_ref.pdbx_align_begin 414 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3BI7 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 205 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q96T88 _struct_ref_seq.db_align_beg 414 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 617 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 414 _struct_ref_seq.pdbx_auth_seq_align_end 617 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3BI7 MSE A 1 ? UNP Q96T88 ? ? 'EXPRESSION TAG' 413 1 1 3BI7 ALA A 206 ? UNP Q96T88 ? ? 'EXPRESSION TAG' 618 2 1 3BI7 HIS A 207 ? UNP Q96T88 ? ? 'EXPRESSION TAG' 619 3 1 3BI7 HIS A 208 ? UNP Q96T88 ? ? 'EXPRESSION TAG' 620 4 1 3BI7 HIS A 209 ? UNP Q96T88 ? ? 'EXPRESSION TAG' 621 5 1 3BI7 HIS A 210 ? UNP Q96T88 ? ? 'EXPRESSION TAG' 622 6 1 3BI7 HIS A 211 ? UNP Q96T88 ? ? 'EXPRESSION TAG' 623 7 1 3BI7 HIS A 212 ? UNP Q96T88 ? ? 'EXPRESSION TAG' 624 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNL non-polymer . 'UNKNOWN LIGAND' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3BI7 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.52 _exptl_crystal.density_percent_sol 51.27 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details ;1:1 ratio of protein (34 mg/ml) solution and well solution consisting of 1.4 M Ammonium sulfate, 0.1 M Bis-Tris pH 6.0, 0.2 M NaCl, 1 mM TCEP. Crystals cryoprotected by immersion in the well solution mixed in 1:1 ratio with a water solution containing 20% (w/v) Sucrose, 4% (w/v) Glucose, 18% (v/v) Glycerol and 18% (v/v) Ethylene glycol, VAPOR DIFFUSION, HANGING DROP, temperature 298K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2007-10-20 _diffrn_detector.details Mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97943 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 23-ID-B' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 23-ID-B _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97943 # _reflns.entry_id 3BI7 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I -3 _reflns.d_resolution_high 1.7 _reflns.d_resolution_low 50 _reflns.number_all 27377 _reflns.number_obs 27377 _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.153 _reflns.pdbx_netI_over_sigmaI 24.15 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 9.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.7 _reflns_shell.d_res_low 1.76 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.9 _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.pdbx_redundancy 6.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2670 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3BI7 _refine.ls_number_reflns_obs 25677 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 32.99 _refine.ls_d_res_high 1.70 _refine.ls_percent_reflns_obs 99.39 _refine.ls_R_factor_obs 0.16043 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.15851 _refine.ls_R_factor_R_free 0.19658 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1369 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.965 _refine.correlation_coeff_Fo_to_Fc_free 0.943 _refine.B_iso_mean 15.105 _refine.aniso_B[1][1] 0.77 _refine.aniso_B[2][2] 0.77 _refine.aniso_B[3][3] -1.15 _refine.aniso_B[1][2] 0.38 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.085 _refine.pdbx_overall_ESU_R_Free 0.090 _refine.overall_SU_ML 0.057 _refine.overall_SU_B 3.287 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1547 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 210 _refine_hist.number_atoms_total 1785 _refine_hist.d_res_high 1.70 _refine_hist.d_res_low 32.99 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.018 0.021 ? 1616 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.519 1.942 ? 2190 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.149 5.000 ? 201 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 30.958 23.165 ? 79 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.326 15.000 ? 238 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 20.645 15.000 ? 13 'X-RAY DIFFRACTION' ? r_chiral_restr 0.121 0.200 ? 216 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.020 ? 1280 'X-RAY DIFFRACTION' ? r_nbd_refined 0.199 0.200 ? 724 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.309 0.200 ? 1100 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.131 0.200 ? 153 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.261 0.200 ? 51 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.119 0.200 ? 20 'X-RAY DIFFRACTION' ? r_mcbond_it 1.055 1.500 ? 1005 'X-RAY DIFFRACTION' ? r_mcangle_it 1.471 2.000 ? 1573 'X-RAY DIFFRACTION' ? r_scbond_it 2.207 3.000 ? 707 'X-RAY DIFFRACTION' ? r_scangle_it 3.265 4.500 ? 617 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.700 _refine_ls_shell.d_res_low 1.744 _refine_ls_shell.number_reflns_R_work 1868 _refine_ls_shell.R_factor_R_work 0.207 _refine_ls_shell.percent_reflns_obs 98.49 _refine_ls_shell.R_factor_R_free 0.284 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 93 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3BI7 _struct.title 'Crystal structure of the SRA domain of E3 ubiquitin-protein ligase UHRF1' _struct.pdbx_descriptor 'E3 ubiquitin-protein ligase UHRF1 (E.C.6.3.2.-)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3BI7 _struct_keywords.pdbx_keywords LIGASE _struct_keywords.text ;Cell cycle, DNA damage, DNA repair, DNA-binding, Ligase, Metal-binding, Nucleus, Phosphorylation, Polymorphism, Transcription, Transcription regulation, Ubl conjugation, Ubl conjugation pathway, Zinc, Zinc-finger, Structural Genomics Consortium, SGC, Phosphoprotein ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 20 ? SER A 27 ? PHE A 432 SER A 439 1 ? 8 HELX_P HELX_P2 2 THR A 90 ? CYS A 100 ? THR A 502 CYS A 512 1 ? 11 HELX_P HELX_P3 3 ASP A 114 ? GLY A 118 ? ASP A 526 GLY A 530 5 ? 5 HELX_P HELX_P4 4 LYS A 128 ? SER A 133 ? LYS A 540 SER A 545 5 ? 6 HELX_P HELX_P5 5 THR A 179 ? GLY A 190 ? THR A 591 GLY A 602 1 ? 12 HELX_P HELX_P6 6 GLY A 198 ? ALA A 206 ? GLY A 610 ALA A 618 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A THR 16 C ? ? ? 1_555 A MSE 17 N ? ? A THR 428 A MSE 429 1_555 ? ? ? ? ? ? ? 1.324 ? covale2 covale ? ? A MSE 17 C ? ? ? 1_555 A TRP 18 N ? ? A MSE 429 A TRP 430 1_555 ? ? ? ? ? ? ? 1.335 ? covale3 covale ? ? A THR 192 C A ? ? 1_555 A MSE 193 N ? ? A THR 604 A MSE 605 1_555 ? ? ? ? ? ? ? 1.331 ? covale4 covale ? ? A THR 192 C B ? ? 1_555 A MSE 193 N ? ? A THR 604 A MSE 605 1_555 ? ? ? ? ? ? ? 1.330 ? covale5 covale ? ? A MSE 193 C ? ? ? 1_555 A GLN 194 N ? ? A MSE 605 A GLN 606 1_555 ? ? ? ? ? ? ? 1.332 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MSE A 17 ? TRP A 18 ? MSE A 429 TRP A 430 A 2 ASN A 141 ? LYS A 156 ? ASN A 553 LYS A 568 A 3 LEU A 162 ? ARG A 170 ? LEU A 574 ARG A 582 A 4 PHE A 63 ? THR A 67 ? PHE A 475 THR A 479 B 1 ILE A 37 ? ARG A 40 ? ILE A 449 ARG A 452 B 2 GLY A 44 ? LEU A 50 ? GLY A 456 LEU A 462 B 3 VAL A 121 ? ASN A 126 ? VAL A 533 ASN A 538 B 4 ASN A 141 ? LYS A 156 ? ASN A 553 LYS A 568 B 5 ALA A 110 ? GLU A 111 ? ALA A 522 GLU A 523 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TRP A 18 ? N TRP A 430 O ASN A 141 ? O ASN A 553 A 2 3 N GLU A 155 ? N GLU A 567 O VAL A 163 ? O VAL A 575 A 3 4 O LEU A 168 ? O LEU A 580 N PHE A 64 ? N PHE A 476 B 1 2 N HIS A 38 ? N HIS A 450 O TYR A 46 ? O TYR A 458 B 2 3 N LEU A 50 ? N LEU A 462 O ASN A 126 ? O ASN A 538 B 3 4 N VAL A 123 ? N VAL A 535 O ASP A 144 ? O ASP A 556 B 4 5 O TYR A 152 ? O TYR A 564 N ALA A 110 ? N ALA A 522 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE SO4 A 5' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE EDO A 1' AC3 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE EDO A 2' AC4 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE EDO A 3' AC5 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE EDO A 4' AC6 Software ? ? ? ? 13 'BINDING SITE FOR RESIDUE UNL A 625' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 ARG A 19 ? ARG A 431 . ? 1_555 ? 2 AC1 8 PHE A 20 ? PHE A 432 . ? 1_555 ? 3 AC1 8 TRP A 115 ? TRP A 527 . ? 2_665 ? 4 AC1 8 ARG A 116 ? ARG A 528 . ? 2_665 ? 5 AC1 8 ARG A 169 ? ARG A 581 . ? 2_665 ? 6 AC1 8 UNL G . ? UNL A 625 . ? 1_555 ? 7 AC1 8 HOH H . ? HOH A 719 . ? 1_555 ? 8 AC1 8 HOH H . ? HOH A 817 . ? 1_555 ? 9 AC2 6 HIS A 33 ? HIS A 445 . ? 1_555 ? 10 AC2 6 ASN A 62 ? ASN A 474 . ? 2_665 ? 11 AC2 6 ARG A 170 ? ARG A 582 . ? 2_665 ? 12 AC2 6 ASP A 172 ? ASP A 584 . ? 2_665 ? 13 AC2 6 HOH H . ? HOH A 644 . ? 2_665 ? 14 AC2 6 HOH H . ? HOH A 816 . ? 1_555 ? 15 AC3 5 VAL A 22 ? VAL A 434 . ? 1_555 ? 16 AC3 5 ASN A 62 ? ASN A 474 . ? 2_665 ? 17 AC3 5 ARG A 169 ? ARG A 581 . ? 2_665 ? 18 AC3 5 UNL G . ? UNL A 625 . ? 1_555 ? 19 AC3 5 HOH H . ? HOH A 653 . ? 2_665 ? 20 AC4 5 VAL A 58 ? VAL A 470 . ? 1_555 ? 21 AC4 5 ASP A 59 ? ASP A 471 . ? 1_555 ? 22 AC4 5 PHE A 101 ? PHE A 513 . ? 4_455 ? 23 AC4 5 ASN A 132 ? ASN A 544 . ? 1_555 ? 24 AC4 5 HOH H . ? HOH A 628 . ? 1_555 ? 25 AC5 6 GLU A 26 ? GLU A 438 . ? 6_665 ? 26 AC5 6 ARG A 31 ? ARG A 443 . ? 6_665 ? 27 AC5 6 ASP A 106 ? ASP A 518 . ? 1_555 ? 28 AC5 6 LYS A 180 ? LYS A 592 . ? 4_565 ? 29 AC5 6 HOH H . ? HOH A 662 . ? 4_565 ? 30 AC5 6 HOH H . ? HOH A 716 . ? 4_565 ? 31 AC6 13 EDO D . ? EDO A 2 . ? 1_555 ? 32 AC6 13 SO4 B . ? SO4 A 5 . ? 1_555 ? 33 AC6 13 PHE A 20 ? PHE A 432 . ? 1_555 ? 34 AC6 13 ARG A 21 ? ARG A 433 . ? 1_555 ? 35 AC6 13 VAL A 22 ? VAL A 434 . ? 1_555 ? 36 AC6 13 ARG A 116 ? ARG A 528 . ? 2_665 ? 37 AC6 13 ARG A 169 ? ARG A 581 . ? 2_665 ? 38 AC6 13 HOH H . ? HOH A 643 . ? 1_555 ? 39 AC6 13 HOH H . ? HOH A 653 . ? 2_665 ? 40 AC6 13 HOH H . ? HOH A 689 . ? 1_555 ? 41 AC6 13 HOH H . ? HOH A 694 . ? 2_665 ? 42 AC6 13 HOH H . ? HOH A 815 . ? 1_555 ? 43 AC6 13 HOH H . ? HOH A 816 . ? 1_555 ? # _database_PDB_matrix.entry_id 3BI7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3BI7 _atom_sites.fract_transf_matrix[1][1] 0.015157 _atom_sites.fract_transf_matrix[1][2] 0.008751 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017502 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010410 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 413 ? ? ? A . n A 1 2 PRO 2 414 414 PRO PRO A . n A 1 3 SER 3 415 415 SER SER A . n A 1 4 ASN 4 416 416 ASN ASN A . n A 1 5 HIS 5 417 417 HIS HIS A . n A 1 6 TYR 6 418 418 TYR TYR A . n A 1 7 GLY 7 419 419 GLY GLY A . n A 1 8 PRO 8 420 420 PRO PRO A . n A 1 9 ILE 9 421 421 ILE ILE A . n A 1 10 PRO 10 422 422 PRO PRO A . n A 1 11 GLY 11 423 423 GLY GLY A . n A 1 12 ILE 12 424 424 ILE ILE A . n A 1 13 PRO 13 425 425 PRO PRO A . n A 1 14 VAL 14 426 426 VAL VAL A . n A 1 15 GLY 15 427 427 GLY GLY A . n A 1 16 THR 16 428 428 THR THR A . n A 1 17 MSE 17 429 429 MSE MSE A . n A 1 18 TRP 18 430 430 TRP TRP A . n A 1 19 ARG 19 431 431 ARG ARG A . n A 1 20 PHE 20 432 432 PHE PHE A . n A 1 21 ARG 21 433 433 ARG ARG A . n A 1 22 VAL 22 434 434 VAL VAL A . n A 1 23 GLN 23 435 435 GLN GLN A . n A 1 24 VAL 24 436 436 VAL VAL A . n A 1 25 SER 25 437 437 SER SER A . n A 1 26 GLU 26 438 438 GLU GLU A . n A 1 27 SER 27 439 439 SER SER A . n A 1 28 GLY 28 440 440 GLY GLY A . n A 1 29 VAL 29 441 441 VAL VAL A . n A 1 30 HIS 30 442 442 HIS HIS A . n A 1 31 ARG 31 443 443 ARG ARG A . n A 1 32 PRO 32 444 444 PRO PRO A . n A 1 33 HIS 33 445 445 HIS HIS A . n A 1 34 VAL 34 446 446 VAL VAL A . n A 1 35 ALA 35 447 447 ALA ALA A . n A 1 36 GLY 36 448 448 GLY GLY A . n A 1 37 ILE 37 449 449 ILE ILE A . n A 1 38 HIS 38 450 450 HIS HIS A . n A 1 39 GLY 39 451 451 GLY GLY A . n A 1 40 ARG 40 452 452 ARG ARG A . n A 1 41 SER 41 453 453 SER SER A . n A 1 42 ASN 42 454 454 ASN ASN A . n A 1 43 ASP 43 455 455 ASP ASP A . n A 1 44 GLY 44 456 456 GLY GLY A . n A 1 45 ALA 45 457 457 ALA ALA A . n A 1 46 TYR 46 458 458 TYR TYR A . n A 1 47 SER 47 459 459 SER SER A . n A 1 48 LEU 48 460 460 LEU LEU A . n A 1 49 VAL 49 461 461 VAL VAL A . n A 1 50 LEU 50 462 462 LEU LEU A . n A 1 51 ALA 51 463 463 ALA ALA A . n A 1 52 GLY 52 464 464 GLY GLY A . n A 1 53 GLY 53 465 465 GLY GLY A . n A 1 54 TYR 54 466 466 TYR TYR A . n A 1 55 GLU 55 467 467 GLU GLU A . n A 1 56 ASP 56 468 468 ASP ASP A . n A 1 57 ASP 57 469 469 ASP ASP A . n A 1 58 VAL 58 470 470 VAL VAL A . n A 1 59 ASP 59 471 471 ASP ASP A . n A 1 60 HIS 60 472 472 HIS HIS A . n A 1 61 GLY 61 473 473 GLY GLY A . n A 1 62 ASN 62 474 474 ASN ASN A . n A 1 63 PHE 63 475 475 PHE PHE A . n A 1 64 PHE 64 476 476 PHE PHE A . n A 1 65 THR 65 477 477 THR THR A . n A 1 66 TYR 66 478 478 TYR TYR A . n A 1 67 THR 67 479 479 THR THR A . n A 1 68 GLY 68 480 480 GLY GLY A . n A 1 69 SER 69 481 481 SER SER A . n A 1 70 GLY 70 482 482 GLY GLY A . n A 1 71 GLY 71 483 483 GLY GLY A . n A 1 72 ARG 72 484 ? ? ? A . n A 1 73 ASP 73 485 ? ? ? A . n A 1 74 LEU 74 486 ? ? ? A . n A 1 75 SER 75 487 ? ? ? A . n A 1 76 GLY 76 488 ? ? ? A . n A 1 77 ASN 77 489 ? ? ? A . n A 1 78 LYS 78 490 ? ? ? A . n A 1 79 ARG 79 491 ? ? ? A . n A 1 80 THR 80 492 ? ? ? A . n A 1 81 ALA 81 493 ? ? ? A . n A 1 82 GLU 82 494 ? ? ? A . n A 1 83 GLN 83 495 ? ? ? A . n A 1 84 SER 84 496 496 SER SER A . n A 1 85 CYS 85 497 497 CYS CYS A . n A 1 86 ASP 86 498 498 ASP ASP A . n A 1 87 GLN 87 499 499 GLN GLN A . n A 1 88 LYS 88 500 500 LYS LYS A . n A 1 89 LEU 89 501 501 LEU LEU A . n A 1 90 THR 90 502 502 THR THR A . n A 1 91 ASN 91 503 503 ASN ASN A . n A 1 92 THR 92 504 504 THR THR A . n A 1 93 ASN 93 505 505 ASN ASN A . n A 1 94 ARG 94 506 506 ARG ARG A . n A 1 95 ALA 95 507 507 ALA ALA A . n A 1 96 LEU 96 508 508 LEU LEU A . n A 1 97 ALA 97 509 509 ALA ALA A . n A 1 98 LEU 98 510 510 LEU LEU A . n A 1 99 ASN 99 511 511 ASN ASN A . n A 1 100 CYS 100 512 512 CYS CYS A . n A 1 101 PHE 101 513 513 PHE PHE A . n A 1 102 ALA 102 514 514 ALA ALA A . n A 1 103 PRO 103 515 515 PRO PRO A . n A 1 104 ILE 104 516 516 ILE ILE A . n A 1 105 ASN 105 517 517 ASN ASN A . n A 1 106 ASP 106 518 518 ASP ASP A . n A 1 107 GLN 107 519 519 GLN GLN A . n A 1 108 GLU 108 520 520 GLU GLU A . n A 1 109 GLY 109 521 521 GLY GLY A . n A 1 110 ALA 110 522 522 ALA ALA A . n A 1 111 GLU 111 523 523 GLU GLU A . n A 1 112 ALA 112 524 524 ALA ALA A . n A 1 113 LYS 113 525 525 LYS LYS A . n A 1 114 ASP 114 526 526 ASP ASP A . n A 1 115 TRP 115 527 527 TRP TRP A . n A 1 116 ARG 116 528 528 ARG ARG A . n A 1 117 SER 117 529 529 SER SER A . n A 1 118 GLY 118 530 530 GLY GLY A . n A 1 119 LYS 119 531 531 LYS LYS A . n A 1 120 PRO 120 532 532 PRO PRO A . n A 1 121 VAL 121 533 533 VAL VAL A . n A 1 122 ARG 122 534 534 ARG ARG A . n A 1 123 VAL 123 535 535 VAL VAL A . n A 1 124 VAL 124 536 536 VAL VAL A . n A 1 125 ARG 125 537 537 ARG ARG A . n A 1 126 ASN 126 538 538 ASN ASN A . n A 1 127 VAL 127 539 539 VAL VAL A . n A 1 128 LYS 128 540 540 LYS LYS A . n A 1 129 GLY 129 541 541 GLY GLY A . n A 1 130 GLY 130 542 542 GLY GLY A . n A 1 131 LYS 131 543 543 LYS LYS A . n A 1 132 ASN 132 544 544 ASN ASN A . n A 1 133 SER 133 545 545 SER SER A . n A 1 134 LYS 134 546 546 LYS LYS A . n A 1 135 TYR 135 547 547 TYR TYR A . n A 1 136 ALA 136 548 548 ALA ALA A . n A 1 137 PRO 137 549 549 PRO PRO A . n A 1 138 ALA 138 550 550 ALA ALA A . n A 1 139 GLU 139 551 551 GLU GLU A . n A 1 140 GLY 140 552 552 GLY GLY A . n A 1 141 ASN 141 553 553 ASN ASN A . n A 1 142 ARG 142 554 554 ARG ARG A . n A 1 143 TYR 143 555 555 TYR TYR A . n A 1 144 ASP 144 556 556 ASP ASP A . n A 1 145 GLY 145 557 557 GLY GLY A . n A 1 146 ILE 146 558 558 ILE ILE A . n A 1 147 TYR 147 559 559 TYR TYR A . n A 1 148 LYS 148 560 560 LYS LYS A . n A 1 149 VAL 149 561 561 VAL VAL A . n A 1 150 VAL 150 562 562 VAL VAL A . n A 1 151 LYS 151 563 563 LYS LYS A . n A 1 152 TYR 152 564 564 TYR TYR A . n A 1 153 TRP 153 565 565 TRP TRP A . n A 1 154 PRO 154 566 566 PRO PRO A . n A 1 155 GLU 155 567 567 GLU GLU A . n A 1 156 LYS 156 568 568 LYS LYS A . n A 1 157 GLY 157 569 569 GLY GLY A . n A 1 158 LYS 158 570 570 LYS LYS A . n A 1 159 SER 159 571 571 SER SER A . n A 1 160 GLY 160 572 572 GLY GLY A . n A 1 161 PHE 161 573 573 PHE PHE A . n A 1 162 LEU 162 574 574 LEU LEU A . n A 1 163 VAL 163 575 575 VAL VAL A . n A 1 164 TRP 164 576 576 TRP TRP A . n A 1 165 ARG 165 577 577 ARG ARG A . n A 1 166 TYR 166 578 578 TYR TYR A . n A 1 167 LEU 167 579 579 LEU LEU A . n A 1 168 LEU 168 580 580 LEU LEU A . n A 1 169 ARG 169 581 581 ARG ARG A . n A 1 170 ARG 170 582 582 ARG ARG A . n A 1 171 ASP 171 583 583 ASP ASP A . n A 1 172 ASP 172 584 584 ASP ASP A . n A 1 173 ASP 173 585 585 ASP ASP A . n A 1 174 GLU 174 586 586 GLU GLU A . n A 1 175 PRO 175 587 587 PRO PRO A . n A 1 176 GLY 176 588 588 GLY GLY A . n A 1 177 PRO 177 589 589 PRO PRO A . n A 1 178 TRP 178 590 590 TRP TRP A . n A 1 179 THR 179 591 591 THR THR A . n A 1 180 LYS 180 592 592 LYS LYS A . n A 1 181 GLU 181 593 593 GLU GLU A . n A 1 182 GLY 182 594 594 GLY GLY A . n A 1 183 LYS 183 595 595 LYS LYS A . n A 1 184 ASP 184 596 596 ASP ASP A . n A 1 185 ARG 185 597 597 ARG ARG A . n A 1 186 ILE 186 598 598 ILE ILE A . n A 1 187 LYS 187 599 599 LYS LYS A . n A 1 188 LYS 188 600 600 LYS LYS A . n A 1 189 LEU 189 601 601 LEU LEU A . n A 1 190 GLY 190 602 602 GLY GLY A . n A 1 191 LEU 191 603 603 LEU LEU A . n A 1 192 THR 192 604 604 THR THR A . n A 1 193 MSE 193 605 605 MSE MSE A . n A 1 194 GLN 194 606 606 GLN GLN A . n A 1 195 TYR 195 607 607 TYR TYR A . n A 1 196 PRO 196 608 608 PRO PRO A . n A 1 197 GLU 197 609 609 GLU GLU A . n A 1 198 GLY 198 610 610 GLY GLY A . n A 1 199 TYR 199 611 611 TYR TYR A . n A 1 200 LEU 200 612 612 LEU LEU A . n A 1 201 GLU 201 613 613 GLU GLU A . n A 1 202 ALA 202 614 614 ALA ALA A . n A 1 203 LEU 203 615 615 LEU LEU A . n A 1 204 ALA 204 616 616 ALA ALA A . n A 1 205 ASN 205 617 617 ASN ASN A . n A 1 206 ALA 206 618 618 ALA ALA A . n A 1 207 HIS 207 619 619 HIS HIS A . n A 1 208 HIS 208 620 ? ? ? A . n A 1 209 HIS 209 621 ? ? ? A . n A 1 210 HIS 210 622 ? ? ? A . n A 1 211 HIS 211 623 ? ? ? A . n A 1 212 HIS 212 624 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 5 5 SO4 SO4 A . C 3 EDO 1 1 1 EDO EDO A . D 3 EDO 1 2 2 EDO EDO A . E 3 EDO 1 3 3 EDO EDO A . F 3 EDO 1 4 4 EDO EDO A . G 4 UNL 1 625 1 UNL UNL A . H 5 HOH 1 626 2 HOH HOH A . H 5 HOH 2 627 4 HOH HOH A . H 5 HOH 3 628 5 HOH HOH A . H 5 HOH 4 629 6 HOH HOH A . H 5 HOH 5 630 7 HOH HOH A . H 5 HOH 6 631 8 HOH HOH A . H 5 HOH 7 632 9 HOH HOH A . H 5 HOH 8 633 10 HOH HOH A . H 5 HOH 9 634 11 HOH HOH A . H 5 HOH 10 635 12 HOH HOH A . H 5 HOH 11 636 13 HOH HOH A . H 5 HOH 12 637 14 HOH HOH A . H 5 HOH 13 638 15 HOH HOH A . H 5 HOH 14 639 16 HOH HOH A . H 5 HOH 15 640 17 HOH HOH A . H 5 HOH 16 641 19 HOH HOH A . H 5 HOH 17 642 20 HOH HOH A . H 5 HOH 18 643 21 HOH HOH A . H 5 HOH 19 644 22 HOH HOH A . H 5 HOH 20 645 23 HOH HOH A . H 5 HOH 21 646 24 HOH HOH A . H 5 HOH 22 647 25 HOH HOH A . H 5 HOH 23 648 26 HOH HOH A . H 5 HOH 24 649 27 HOH HOH A . H 5 HOH 25 650 28 HOH HOH A . H 5 HOH 26 651 30 HOH HOH A . H 5 HOH 27 652 31 HOH HOH A . H 5 HOH 28 653 32 HOH HOH A . H 5 HOH 29 654 34 HOH HOH A . H 5 HOH 30 655 35 HOH HOH A . H 5 HOH 31 656 37 HOH HOH A . H 5 HOH 32 657 38 HOH HOH A . H 5 HOH 33 658 39 HOH HOH A . H 5 HOH 34 659 40 HOH HOH A . H 5 HOH 35 660 41 HOH HOH A . H 5 HOH 36 661 42 HOH HOH A . H 5 HOH 37 662 43 HOH HOH A . H 5 HOH 38 663 44 HOH HOH A . H 5 HOH 39 664 45 HOH HOH A . H 5 HOH 40 665 46 HOH HOH A . H 5 HOH 41 666 47 HOH HOH A . H 5 HOH 42 667 49 HOH HOH A . H 5 HOH 43 668 50 HOH HOH A . H 5 HOH 44 669 51 HOH HOH A . H 5 HOH 45 670 52 HOH HOH A . H 5 HOH 46 671 53 HOH HOH A . H 5 HOH 47 672 54 HOH HOH A . H 5 HOH 48 673 55 HOH HOH A . H 5 HOH 49 674 56 HOH HOH A . H 5 HOH 50 675 58 HOH HOH A . H 5 HOH 51 676 59 HOH HOH A . H 5 HOH 52 677 60 HOH HOH A . H 5 HOH 53 678 61 HOH HOH A . H 5 HOH 54 679 62 HOH HOH A . H 5 HOH 55 680 64 HOH HOH A . H 5 HOH 56 681 66 HOH HOH A . H 5 HOH 57 682 67 HOH HOH A . H 5 HOH 58 683 68 HOH HOH A . H 5 HOH 59 684 69 HOH HOH A . H 5 HOH 60 685 70 HOH HOH A . H 5 HOH 61 686 71 HOH HOH A . H 5 HOH 62 687 72 HOH HOH A . H 5 HOH 63 688 73 HOH HOH A . H 5 HOH 64 689 74 HOH HOH A . H 5 HOH 65 690 75 HOH HOH A . H 5 HOH 66 691 76 HOH HOH A . H 5 HOH 67 692 77 HOH HOH A . H 5 HOH 68 693 78 HOH HOH A . H 5 HOH 69 694 79 HOH HOH A . H 5 HOH 70 695 81 HOH HOH A . H 5 HOH 71 696 83 HOH HOH A . H 5 HOH 72 697 84 HOH HOH A . H 5 HOH 73 698 85 HOH HOH A . H 5 HOH 74 699 86 HOH HOH A . H 5 HOH 75 700 88 HOH HOH A . H 5 HOH 76 701 89 HOH HOH A . H 5 HOH 77 702 90 HOH HOH A . H 5 HOH 78 703 91 HOH HOH A . H 5 HOH 79 704 92 HOH HOH A . H 5 HOH 80 705 93 HOH HOH A . H 5 HOH 81 706 94 HOH HOH A . H 5 HOH 82 707 95 HOH HOH A . H 5 HOH 83 708 97 HOH HOH A . H 5 HOH 84 709 98 HOH HOH A . H 5 HOH 85 710 99 HOH HOH A . H 5 HOH 86 711 100 HOH HOH A . H 5 HOH 87 712 101 HOH HOH A . H 5 HOH 88 713 102 HOH HOH A . H 5 HOH 89 714 104 HOH HOH A . H 5 HOH 90 715 105 HOH HOH A . H 5 HOH 91 716 109 HOH HOH A . H 5 HOH 92 717 110 HOH HOH A . H 5 HOH 93 718 111 HOH HOH A . H 5 HOH 94 719 112 HOH HOH A . H 5 HOH 95 720 113 HOH HOH A . H 5 HOH 96 721 114 HOH HOH A . H 5 HOH 97 722 115 HOH HOH A . H 5 HOH 98 723 116 HOH HOH A . H 5 HOH 99 724 118 HOH HOH A . H 5 HOH 100 725 119 HOH HOH A . H 5 HOH 101 726 120 HOH HOH A . H 5 HOH 102 727 121 HOH HOH A . H 5 HOH 103 728 122 HOH HOH A . H 5 HOH 104 729 123 HOH HOH A . H 5 HOH 105 730 124 HOH HOH A . H 5 HOH 106 731 125 HOH HOH A . H 5 HOH 107 732 126 HOH HOH A . H 5 HOH 108 733 127 HOH HOH A . H 5 HOH 109 734 128 HOH HOH A . H 5 HOH 110 735 129 HOH HOH A . H 5 HOH 111 736 130 HOH HOH A . H 5 HOH 112 737 132 HOH HOH A . H 5 HOH 113 738 134 HOH HOH A . H 5 HOH 114 739 135 HOH HOH A . H 5 HOH 115 740 136 HOH HOH A . H 5 HOH 116 741 137 HOH HOH A . H 5 HOH 117 742 138 HOH HOH A . H 5 HOH 118 743 139 HOH HOH A . H 5 HOH 119 744 140 HOH HOH A . H 5 HOH 120 745 141 HOH HOH A . H 5 HOH 121 746 142 HOH HOH A . H 5 HOH 122 747 144 HOH HOH A . H 5 HOH 123 748 145 HOH HOH A . H 5 HOH 124 749 146 HOH HOH A . H 5 HOH 125 750 147 HOH HOH A . H 5 HOH 126 751 148 HOH HOH A . H 5 HOH 127 752 149 HOH HOH A . H 5 HOH 128 753 150 HOH HOH A . H 5 HOH 129 754 151 HOH HOH A . H 5 HOH 130 755 152 HOH HOH A . H 5 HOH 131 756 153 HOH HOH A . H 5 HOH 132 757 154 HOH HOH A . H 5 HOH 133 758 155 HOH HOH A . H 5 HOH 134 759 160 HOH HOH A . H 5 HOH 135 760 161 HOH HOH A . H 5 HOH 136 761 162 HOH HOH A . H 5 HOH 137 762 163 HOH HOH A . H 5 HOH 138 763 164 HOH HOH A . H 5 HOH 139 764 165 HOH HOH A . H 5 HOH 140 765 166 HOH HOH A . H 5 HOH 141 766 167 HOH HOH A . H 5 HOH 142 767 168 HOH HOH A . H 5 HOH 143 768 169 HOH HOH A . H 5 HOH 144 769 170 HOH HOH A . H 5 HOH 145 770 171 HOH HOH A . H 5 HOH 146 771 172 HOH HOH A . H 5 HOH 147 772 173 HOH HOH A . H 5 HOH 148 773 174 HOH HOH A . H 5 HOH 149 774 175 HOH HOH A . H 5 HOH 150 775 176 HOH HOH A . H 5 HOH 151 776 177 HOH HOH A . H 5 HOH 152 777 178 HOH HOH A . H 5 HOH 153 778 181 HOH HOH A . H 5 HOH 154 779 182 HOH HOH A . H 5 HOH 155 780 183 HOH HOH A . H 5 HOH 156 781 184 HOH HOH A . H 5 HOH 157 782 186 HOH HOH A . H 5 HOH 158 783 189 HOH HOH A . H 5 HOH 159 784 191 HOH HOH A . H 5 HOH 160 785 193 HOH HOH A . H 5 HOH 161 786 194 HOH HOH A . H 5 HOH 162 787 195 HOH HOH A . H 5 HOH 163 788 196 HOH HOH A . H 5 HOH 164 789 197 HOH HOH A . H 5 HOH 165 790 198 HOH HOH A . H 5 HOH 166 791 199 HOH HOH A . H 5 HOH 167 792 201 HOH HOH A . H 5 HOH 168 793 202 HOH HOH A . H 5 HOH 169 794 203 HOH HOH A . H 5 HOH 170 795 205 HOH HOH A . H 5 HOH 171 796 206 HOH HOH A . H 5 HOH 172 797 208 HOH HOH A . H 5 HOH 173 798 209 HOH HOH A . H 5 HOH 174 799 210 HOH HOH A . H 5 HOH 175 800 211 HOH HOH A . H 5 HOH 176 801 214 HOH HOH A . H 5 HOH 177 802 215 HOH HOH A . H 5 HOH 178 803 223 HOH HOH A . H 5 HOH 179 804 224 HOH HOH A . H 5 HOH 180 805 229 HOH HOH A . H 5 HOH 181 806 230 HOH HOH A . H 5 HOH 182 807 231 HOH HOH A . H 5 HOH 183 808 232 HOH HOH A . H 5 HOH 184 809 233 HOH HOH A . H 5 HOH 185 810 234 HOH HOH A . H 5 HOH 186 811 236 HOH HOH A . H 5 HOH 187 812 238 HOH HOH A . H 5 HOH 188 813 239 HOH HOH A . H 5 HOH 189 814 240 HOH HOH A . H 5 HOH 190 815 241 HOH HOH A . H 5 HOH 191 816 242 HOH HOH A . H 5 HOH 192 817 243 HOH HOH A . H 5 HOH 193 818 244 HOH HOH A . H 5 HOH 194 819 245 HOH HOH A . H 5 HOH 195 820 246 HOH HOH A . H 5 HOH 196 821 247 HOH HOH A . H 5 HOH 197 822 248 HOH HOH A . H 5 HOH 198 823 249 HOH HOH A . H 5 HOH 199 824 250 HOH HOH A . H 5 HOH 200 825 251 HOH HOH A . H 5 HOH 201 826 252 HOH HOH A . H 5 HOH 202 827 253 HOH HOH A . H 5 HOH 203 828 254 HOH HOH A . H 5 HOH 204 829 255 HOH HOH A . H 5 HOH 205 830 256 HOH HOH A . H 5 HOH 206 831 257 HOH HOH A . H 5 HOH 207 832 258 HOH HOH A . H 5 HOH 208 833 259 HOH HOH A . H 5 HOH 209 834 260 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 17 A MSE 429 ? MET SELENOMETHIONINE 2 A MSE 193 A MSE 605 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-12-18 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Version format compliance' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 9.4852 45.7618 10.7113 0.0010 0.0891 0.0526 -0.0627 -0.0245 0.0056 2.2406 10.1697 2.8855 -2.1607 0.3584 0.7156 -0.0031 -0.0592 0.2333 0.3106 -0.0496 -0.5498 -0.2141 0.4909 0.0526 'X-RAY DIFFRACTION' 2 ? refined 1.7839 33.4669 14.8822 0.0479 0.0661 0.0453 -0.0151 -0.0036 0.0086 2.0689 1.4434 3.4175 0.3008 -1.4843 -2.0305 -0.0422 0.0097 -0.0577 0.0680 -0.0718 0.0416 0.2459 0.0463 0.1139 'X-RAY DIFFRACTION' 3 ? refined 4.4086 41.5176 17.1820 0.0386 0.0868 0.0490 -0.0437 -0.0173 0.0150 8.2507 2.9351 7.2564 0.4650 -1.7516 -0.3725 0.0964 -0.0595 -0.2632 0.0348 -0.1539 -0.0861 -0.2803 0.3464 0.0574 'X-RAY DIFFRACTION' 4 ? refined -0.0159 50.9694 15.9232 0.1367 0.0563 0.0226 -0.0595 -0.0277 -0.0250 3.2782 2.9515 1.3788 0.5194 -1.3974 -1.7204 -0.0120 -0.3368 0.0333 0.3188 -0.1486 -0.2359 -0.4242 0.0580 0.1606 'X-RAY DIFFRACTION' 5 ? refined -9.6260 42.8774 11.2704 0.0044 0.0570 0.0921 -0.0110 0.0412 -0.0289 10.0476 8.4827 1.9622 3.5930 0.6337 -1.6069 0.0850 -0.4076 0.5154 0.2441 -0.0181 0.9801 -0.1111 -0.4044 -0.0669 'X-RAY DIFFRACTION' 6 ? refined -12.3484 42.8916 2.9448 0.0415 0.0472 0.0975 -0.0324 0.0238 -0.0039 4.3203 7.7046 7.6669 0.1959 -0.6498 1.7146 0.0576 -0.0671 0.1792 0.1872 -0.1504 0.6005 -0.0700 -0.3815 0.0928 'X-RAY DIFFRACTION' 7 ? refined -12.8714 56.8422 15.2162 0.1156 0.0210 0.0346 -0.0013 0.1286 -0.0619 12.2228 8.1984 3.1302 2.8161 3.3023 -0.5426 -0.0663 -0.8201 0.7010 0.6793 -0.0718 0.6893 -0.1747 -0.4112 0.1381 'X-RAY DIFFRACTION' 8 ? refined -3.1536 57.8079 6.2185 0.0864 0.0056 0.0697 -0.0446 0.0017 -0.0093 0.8008 2.7181 5.6778 0.5860 -1.8185 -2.5046 0.0731 -0.0610 0.1823 0.1345 0.0026 0.0989 -0.2544 0.0360 -0.0757 'X-RAY DIFFRACTION' 9 ? refined -9.4048 61.8126 1.7452 0.1304 0.0008 0.1468 -0.0060 0.0043 0.0296 7.1148 6.7731 13.3377 -1.0117 -4.4875 5.4528 0.2107 0.2434 0.3348 -0.1681 -0.3341 0.5929 -0.7616 -0.4788 0.1234 'X-RAY DIFFRACTION' 10 ? refined -4.5773 42.8818 5.7116 0.0813 0.0783 0.0951 -0.0274 0.0051 -0.0051 1.0431 2.4800 1.4986 1.0795 -0.4613 -0.6720 0.0120 -0.0416 0.0401 -0.0006 -0.0084 0.0824 -0.0216 -0.0837 -0.0036 'X-RAY DIFFRACTION' 11 ? refined -9.8405 31.9166 5.9904 0.0804 0.0420 0.0648 -0.0419 -0.0076 -0.0147 3.2435 6.2048 9.3239 1.0152 2.6491 -2.1001 0.0738 -0.0116 0.0897 -0.0485 -0.0675 0.0768 0.2133 -0.1720 -0.0063 'X-RAY DIFFRACTION' 12 ? refined -1.0509 41.3560 4.7640 0.0666 0.0475 0.0715 -0.0370 0.0002 0.0057 0.5961 1.0099 1.8198 -0.7736 0.5027 -0.7428 0.0293 -0.0441 0.0915 0.0031 -0.0932 -0.0180 0.0117 0.0747 0.0639 'X-RAY DIFFRACTION' 13 ? refined -12.6964 55.9490 2.8098 0.0476 0.0197 0.0995 -0.0149 0.0171 -0.0019 11.3456 6.5559 2.4010 -0.2768 -0.2986 -3.3937 -0.1380 0.5132 0.1901 -0.0449 0.1884 0.4549 -0.0881 -0.3149 -0.0503 'X-RAY DIFFRACTION' 14 ? refined -23.7186 53.1726 11.5054 0.0765 0.1395 0.2135 -0.1482 0.2034 -0.0653 18.6732 11.6614 62.9010 6.7978 -16.2077 -11.0161 0.0824 -0.1676 0.3352 1.0866 -0.1635 0.9289 1.1327 -2.8535 0.0811 'X-RAY DIFFRACTION' 15 ? refined -14.6336 54.3175 8.2943 0.0612 0.0214 0.1118 -0.0363 0.0730 -0.0259 4.4907 4.5926 9.8643 -3.9983 -4.3882 1.5072 -0.1756 0.4196 -0.0512 0.4164 -0.0664 0.5144 0.1948 -0.4941 0.2420 'X-RAY DIFFRACTION' 16 ? refined 0.0065 38.3980 -2.4431 0.0746 0.0694 0.0504 -0.0241 0.0081 -0.0028 2.1781 3.9329 1.0024 -2.0877 -0.4289 0.4908 0.0319 0.0810 0.0210 -0.1494 -0.0940 -0.0947 0.0742 0.1348 0.0621 'X-RAY DIFFRACTION' 17 ? refined 5.3699 27.1426 -0.7493 0.0545 0.0160 0.0377 0.0550 0.0152 0.0012 9.5070 14.9198 15.6251 -3.6229 -0.6965 1.8685 -0.0456 0.2397 0.1956 -0.3541 -0.0312 -0.2211 0.8301 0.0714 0.0768 'X-RAY DIFFRACTION' 18 ? refined 7.2667 25.9290 6.9147 0.0919 0.0165 0.0141 0.0634 -0.0345 0.0121 11.8915 5.0766 29.5856 2.2628 -12.1812 -2.8962 -0.3244 -0.1798 -0.1710 0.0873 -0.0454 -0.1987 1.0483 1.0795 0.3698 'X-RAY DIFFRACTION' 19 ? refined 3.4194 23.3150 22.4749 0.0700 0.0543 0.0452 0.0687 0.0071 0.0165 3.0850 9.8277 15.8452 2.9869 -1.6464 -7.7099 0.0424 -0.0095 -0.2726 -0.2922 -0.2522 -0.1086 0.8364 0.7077 0.2098 'X-RAY DIFFRACTION' 20 ? refined -2.7276 16.5213 28.3319 0.1605 -0.0573 0.0525 0.0200 0.0452 0.0123 24.6922 24.5428 41.1245 22.4887 -19.1661 -7.1315 -0.6053 -0.0536 -0.6604 -0.4796 -0.5682 -0.2819 1.9340 -0.5407 1.1735 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 414 A 2 A 424 A 12 ? 'X-RAY DIFFRACTION' ? 2 2 A 425 A 13 A 437 A 25 ? 'X-RAY DIFFRACTION' ? 3 3 A 438 A 26 A 444 A 32 ? 'X-RAY DIFFRACTION' ? 4 4 A 445 A 33 A 458 A 46 ? 'X-RAY DIFFRACTION' ? 5 5 A 459 A 47 A 466 A 54 ? 'X-RAY DIFFRACTION' ? 6 6 A 467 A 55 A 478 A 66 ? 'X-RAY DIFFRACTION' ? 7 7 A 479 A 67 A 504 A 92 ? 'X-RAY DIFFRACTION' ? 8 8 A 505 A 93 A 515 A 103 ? 'X-RAY DIFFRACTION' ? 9 9 A 516 A 104 A 525 A 113 ? 'X-RAY DIFFRACTION' ? 10 10 A 526 A 114 A 543 A 131 ? 'X-RAY DIFFRACTION' ? 11 11 A 544 A 132 A 551 A 139 ? 'X-RAY DIFFRACTION' ? 12 12 A 552 A 140 A 562 A 150 ? 'X-RAY DIFFRACTION' ? 13 13 A 563 A 151 A 566 A 154 ? 'X-RAY DIFFRACTION' ? 14 14 A 567 A 155 A 573 A 161 ? 'X-RAY DIFFRACTION' ? 15 15 A 574 A 162 A 578 A 166 ? 'X-RAY DIFFRACTION' ? 16 16 A 579 A 167 A 593 A 181 ? 'X-RAY DIFFRACTION' ? 17 17 A 594 A 182 A 599 A 187 ? 'X-RAY DIFFRACTION' ? 18 18 A 600 A 188 A 605 A 193 ? 'X-RAY DIFFRACTION' ? 19 19 A 606 A 194 A 613 A 201 ? 'X-RAY DIFFRACTION' ? 20 20 A 614 A 202 A 619 A 207 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 HKL-2000 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 SOLVE phasing . ? 5 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CB A SER 496 ? ? OG A SER 496 ? ? 1.616 1.418 0.198 0.013 N 2 1 CB A CYS 497 ? ? SG A CYS 497 ? ? 1.966 1.818 0.148 0.017 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 446 ? ? -122.29 -50.26 2 1 ASP A 455 ? ? -139.08 -71.93 3 1 ASN A 503 ? ? 48.66 -131.92 4 1 ASP A 526 ? ? -97.94 57.82 5 1 ASP A 583 ? ? -150.04 85.89 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 500 ? CE ? A LYS 88 CE 2 1 Y 1 A LYS 500 ? NZ ? A LYS 88 NZ 3 1 Y 1 A LYS 543 ? CD ? A LYS 131 CD 4 1 Y 1 A LYS 543 ? CE ? A LYS 131 CE 5 1 Y 1 A LYS 543 ? NZ ? A LYS 131 NZ 6 1 Y 1 A LYS 568 ? CD ? A LYS 156 CD 7 1 Y 1 A LYS 568 ? CE ? A LYS 156 CE 8 1 Y 1 A LYS 568 ? NZ ? A LYS 156 NZ 9 1 Y 1 A LYS 570 ? CG ? A LYS 158 CG 10 1 Y 1 A LYS 570 ? CD ? A LYS 158 CD 11 1 Y 1 A LYS 570 ? CE ? A LYS 158 CE 12 1 Y 1 A LYS 570 ? NZ ? A LYS 158 NZ 13 1 Y 1 A LYS 595 ? CE ? A LYS 183 CE 14 1 Y 1 A LYS 595 ? NZ ? A LYS 183 NZ 15 1 Y 1 A LYS 599 ? CD ? A LYS 187 CD 16 1 Y 1 A LYS 599 ? CE ? A LYS 187 CE 17 1 Y 1 A LYS 599 ? NZ ? A LYS 187 NZ 18 1 Y 1 A LYS 600 ? CD ? A LYS 188 CD 19 1 Y 1 A LYS 600 ? CE ? A LYS 188 CE 20 1 Y 1 A LYS 600 ? NZ ? A LYS 188 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 413 ? A MSE 1 2 1 Y 1 A ARG 484 ? A ARG 72 3 1 Y 1 A ASP 485 ? A ASP 73 4 1 Y 1 A LEU 486 ? A LEU 74 5 1 Y 1 A SER 487 ? A SER 75 6 1 Y 1 A GLY 488 ? A GLY 76 7 1 Y 1 A ASN 489 ? A ASN 77 8 1 Y 1 A LYS 490 ? A LYS 78 9 1 Y 1 A ARG 491 ? A ARG 79 10 1 Y 1 A THR 492 ? A THR 80 11 1 Y 1 A ALA 493 ? A ALA 81 12 1 Y 1 A GLU 494 ? A GLU 82 13 1 Y 1 A GLN 495 ? A GLN 83 14 1 Y 1 A HIS 620 ? A HIS 208 15 1 Y 1 A HIS 621 ? A HIS 209 16 1 Y 1 A HIS 622 ? A HIS 210 17 1 Y 1 A HIS 623 ? A HIS 211 18 1 Y 1 A HIS 624 ? A HIS 212 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 1,2-ETHANEDIOL EDO 4 'UNKNOWN LIGAND' UNL 5 water HOH #