data_3BJH # _entry.id 3BJH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3BJH RCSB RCSB045596 WWPDB D_1000045596 # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2007-12-18 _pdbx_database_PDB_obs_spr.pdb_id 3BJH _pdbx_database_PDB_obs_spr.replace_pdb_id 1R5R _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3BFA 'the same protein complexed with the Queen mandibular pheromone' unspecified PDB 3BFB 'the same protein with the 9-keto-2(E)-decenoic acid' unspecified PDB 3BFH 'the same protein with the hexadecanoic acid' unspecified PDB 2H8V 'the same protein without ligand' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3BJH _pdbx_database_status.recvd_initial_deposition_date 2007-12-04 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lartigue, A.' 1 'Gruez, A.' 2 'Briand, L.' 3 'Blon, F.' 4 'Bezirard, V.' 5 'Walsh, M.' 6 'Pernollet, J.C.' 7 'Tegoni, M.' 8 'Cambillau, C.' 9 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Sulfur single-wavelength anomalous diffraction crystal structure of a pheromone-binding protein from the honeybee Apis mellifera L.' J.Biol.Chem. 279 4459 4464 2004 JBCHA3 US 0021-9258 0071 ? 14594955 10.1074/jbc.M311212200 1 'Structural Basis of the Honey Bee PBP Pheromone and pH-induced Conformational Change' J.Mol.Biol. ? ? ? 2008 JMOBAK UK 1089-8638 0070 ? 18508083 10.1016/j.jmb.2008.04.048 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Lartigue, A.' 1 primary 'Gruez, A.' 2 primary 'Briand, L.' 3 primary 'Blon, F.' 4 primary 'Walsh, M.' 5 primary 'Pernollet, J.C.' 6 primary 'Tegoni, M.' 7 primary 'Cambillau, C.' 8 1 'Pesenti, M.E.' 9 1 'Spinelli, S.' 10 1 'Bezirard, V.' 11 1 'Briand, L.' 12 1 'Pernollet, J.C.' 13 1 'Tegoni, M.' 14 1 'Cambillau, C.' 15 # _cell.entry_id 3BJH _cell.length_a 75.386 _cell.length_b 86.289 _cell.length_c 50.698 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3BJH _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Pheromone-binding protein ASP1' 13194.789 1 ? ? 'UNP residues 26-144' ? 2 non-polymer syn N-BUTYL-BENZENESULFONAMIDE 213.297 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 water nat water 18.015 158 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;APDWVPPEVFDLVAEDKARCMSEHGTTQAQIDDVDKGNLVNEPSITCYMYCLLEAFSLVDDEANVDEDIMLGLLPDQLQE RAQSVMGKCLPTSGSDNCNKIYNLAKCVQESAPDVWFVI ; _entity_poly.pdbx_seq_one_letter_code_can ;APDWVPPEVFDLVAEDKARCMSEHGTTQAQIDDVDKGNLVNEPSITCYMYCLLEAFSLVDDEANVDEDIMLGLLPDQLQE RAQSVMGKCLPTSGSDNCNKIYNLAKCVQESAPDVWFVI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 PRO n 1 3 ASP n 1 4 TRP n 1 5 VAL n 1 6 PRO n 1 7 PRO n 1 8 GLU n 1 9 VAL n 1 10 PHE n 1 11 ASP n 1 12 LEU n 1 13 VAL n 1 14 ALA n 1 15 GLU n 1 16 ASP n 1 17 LYS n 1 18 ALA n 1 19 ARG n 1 20 CYS n 1 21 MET n 1 22 SER n 1 23 GLU n 1 24 HIS n 1 25 GLY n 1 26 THR n 1 27 THR n 1 28 GLN n 1 29 ALA n 1 30 GLN n 1 31 ILE n 1 32 ASP n 1 33 ASP n 1 34 VAL n 1 35 ASP n 1 36 LYS n 1 37 GLY n 1 38 ASN n 1 39 LEU n 1 40 VAL n 1 41 ASN n 1 42 GLU n 1 43 PRO n 1 44 SER n 1 45 ILE n 1 46 THR n 1 47 CYS n 1 48 TYR n 1 49 MET n 1 50 TYR n 1 51 CYS n 1 52 LEU n 1 53 LEU n 1 54 GLU n 1 55 ALA n 1 56 PHE n 1 57 SER n 1 58 LEU n 1 59 VAL n 1 60 ASP n 1 61 ASP n 1 62 GLU n 1 63 ALA n 1 64 ASN n 1 65 VAL n 1 66 ASP n 1 67 GLU n 1 68 ASP n 1 69 ILE n 1 70 MET n 1 71 LEU n 1 72 GLY n 1 73 LEU n 1 74 LEU n 1 75 PRO n 1 76 ASP n 1 77 GLN n 1 78 LEU n 1 79 GLN n 1 80 GLU n 1 81 ARG n 1 82 ALA n 1 83 GLN n 1 84 SER n 1 85 VAL n 1 86 MET n 1 87 GLY n 1 88 LYS n 1 89 CYS n 1 90 LEU n 1 91 PRO n 1 92 THR n 1 93 SER n 1 94 GLY n 1 95 SER n 1 96 ASP n 1 97 ASN n 1 98 CYS n 1 99 ASN n 1 100 LYS n 1 101 ILE n 1 102 TYR n 1 103 ASN n 1 104 LEU n 1 105 ALA n 1 106 LYS n 1 107 CYS n 1 108 VAL n 1 109 GLN n 1 110 GLU n 1 111 SER n 1 112 ALA n 1 113 PRO n 1 114 ASP n 1 115 VAL n 1 116 TRP n 1 117 PHE n 1 118 VAL n 1 119 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name Honeybee _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Apis mellifera' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id ? _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Pichia pastoris' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pHIL-D2 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9U9J6_APIME _struct_ref.pdbx_db_accession Q9U9J6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;APDWVPPEVFDLVAEDKARCMSEHGTTQAQIDDVDKGNLVNEPSITCYMYCLLEAFSLVDDEANVDEDIMLGLLPDQLQE RAQSVMGKCLPTSGSDNCNKIYNLAKCVQESAPDVWFVI ; _struct_ref.pdbx_align_begin 26 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3BJH _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 119 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9U9J6 _struct_ref_seq.db_align_beg 26 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 144 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 119 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NBB non-polymer . N-BUTYL-BENZENESULFONAMIDE ? 'C10 H15 N O2 S' 213.297 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3BJH _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.12 _exptl_crystal.density_percent_sol 60.63 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pdbx_details '1.5M ammonium sulfate, 0.15M sodium citrate, pH5.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2002-07-23 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Diamond (111), Ge (220)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.933 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.933 # _reflns.entry_id 3BJH _reflns.observed_criterion_sigma_F 5.4 _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 1.6 _reflns.d_resolution_low 37.8 _reflns.number_all ? _reflns.number_obs 22274 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs 0.062 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.6 _reflns_shell.d_res_low 1.68 _reflns_shell.percent_possible_all 99.6 _reflns_shell.Rmerge_I_obs 0.305 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.4 _reflns_shell.pdbx_redundancy 3.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3BJH _refine.ls_number_reflns_obs 19846 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 1.60 _refine.ls_percent_reflns_obs 99.50 _refine.ls_R_factor_obs 0.17495 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17147 _refine.ls_R_factor_R_free 0.20645 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.1 _refine.ls_number_reflns_R_free 2234 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.968 _refine.correlation_coeff_Fo_to_Fc_free 0.951 _refine.B_iso_mean 32.369 _refine.aniso_B[1][1] 2.50 _refine.aniso_B[2][2] -1.00 _refine.aniso_B[3][3] -1.51 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.076 _refine.pdbx_overall_ESU_R_Free 0.081 _refine.overall_SU_ML 0.050 _refine.overall_SU_B 2.850 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3BJH _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free 0.08 _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 907 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 20 _refine_hist.number_atoms_solvent 158 _refine_hist.number_atoms_total 1085 _refine_hist.d_res_high 1.60 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.022 ? 954 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 622 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.355 1.992 ? 1298 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.798 3.008 ? 1534 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.609 5.000 ? 116 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 38.688 27.111 ? 45 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.954 15.000 ? 162 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 9.103 15.000 ? 2 'X-RAY DIFFRACTION' ? r_chiral_restr 0.076 0.200 ? 147 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 1046 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 162 'X-RAY DIFFRACTION' ? r_nbd_refined 0.224 0.200 ? 217 'X-RAY DIFFRACTION' ? r_nbd_other 0.185 0.200 ? 603 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.180 0.200 ? 477 'X-RAY DIFFRACTION' ? r_nbtor_other 0.091 0.200 ? 469 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.185 0.200 ? 108 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.261 0.200 ? 11 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.170 0.200 ? 30 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.140 0.200 ? 22 'X-RAY DIFFRACTION' ? r_mcbond_it 0.798 1.500 ? 760 'X-RAY DIFFRACTION' ? r_mcbond_other 0.199 1.500 ? 233 'X-RAY DIFFRACTION' ? r_mcangle_it 1.013 2.000 ? 957 'X-RAY DIFFRACTION' ? r_scbond_it 1.513 3.000 ? 418 'X-RAY DIFFRACTION' ? r_scangle_it 1.968 4.500 ? 341 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.600 _refine_ls_shell.d_res_low 1.641 _refine_ls_shell.number_reflns_R_work 1442 _refine_ls_shell.R_factor_R_work 0.191 _refine_ls_shell.percent_reflns_obs 99.57 _refine_ls_shell.R_factor_R_free 0.205 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 166 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1442 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3BJH _struct.title 'Soft-SAD crystal structure of a pheromone binding protein from the honeybee Apis mellifera L.' _struct.pdbx_descriptor 'Pheromone-binding protein ASP1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3BJH _struct_keywords.pdbx_keywords 'PHEROMONE BINDING PROTEIN' _struct_keywords.text 'Honeybee, Apis mellifera, Pheromone binding protein, signal transduction' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 6 ? GLY A 25 ? PRO A 6 GLY A 25 1 ? 20 HELX_P HELX_P2 2 THR A 27 ? LYS A 36 ? THR A 27 LYS A 36 1 ? 10 HELX_P HELX_P3 3 GLU A 42 ? PHE A 56 ? GLU A 42 PHE A 56 1 ? 15 HELX_P HELX_P4 4 ASP A 66 ? LEU A 74 ? ASP A 66 LEU A 74 1 ? 9 HELX_P HELX_P5 5 PRO A 75 ? GLN A 77 ? PRO A 75 GLN A 77 5 ? 3 HELX_P HELX_P6 6 LEU A 78 ? LEU A 90 ? LEU A 78 LEU A 90 1 ? 13 HELX_P HELX_P7 7 ASP A 96 ? ALA A 112 ? ASP A 96 ALA A 112 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 20 SG ? ? ? 1_555 A CYS 51 SG ? ? A CYS 20 A CYS 51 1_555 ? ? ? ? ? ? ? 2.082 ? disulf2 disulf ? ? A CYS 47 SG ? ? ? 1_555 A CYS 98 SG ? ? A CYS 47 A CYS 98 1_555 ? ? ? ? ? ? ? 2.140 ? disulf3 disulf ? ? A CYS 89 SG ? ? ? 1_555 A CYS 107 SG ? ? A CYS 89 A CYS 107 1_555 ? ? ? ? ? ? ? 2.061 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LEU _struct_mon_prot_cis.label_seq_id 90 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LEU _struct_mon_prot_cis.auth_seq_id 90 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 91 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 91 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -1.00 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'BINDING SITE FOR RESIDUE NBB A 120' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 MET A 49 ? MET A 49 . ? 1_555 ? 2 AC1 6 LEU A 52 ? LEU A 52 . ? 1_555 ? 3 AC1 6 LEU A 53 ? LEU A 53 . ? 1_555 ? 4 AC1 6 LEU A 58 ? LEU A 58 . ? 1_555 ? 5 AC1 6 PHE A 117 ? PHE A 117 . ? 1_555 ? 6 AC1 6 ILE A 119 ? ILE A 119 . ? 1_555 ? # _database_PDB_matrix.entry_id 3BJH _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3BJH _atom_sites.fract_transf_matrix[1][1] 0.013265 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011589 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019725 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 ? ? ? A . n A 1 2 PRO 2 2 ? ? ? A . n A 1 3 ASP 3 3 3 ASP ASP A . n A 1 4 TRP 4 4 4 TRP TRP A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 PRO 6 6 6 PRO PRO A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 GLU 8 8 8 GLU GLU A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 PHE 10 10 10 PHE PHE A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 ARG 19 19 19 ARG ARG A . n A 1 20 CYS 20 20 20 CYS CYS A . n A 1 21 MET 21 21 21 MET MET A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 HIS 24 24 24 HIS HIS A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 GLN 28 28 28 GLN GLN A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 GLN 30 30 30 GLN GLN A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 ASP 33 33 33 ASP ASP A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 GLY 37 37 37 GLY GLY A . n A 1 38 ASN 38 38 38 ASN ASN A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 ASN 41 41 41 ASN ASN A . n A 1 42 GLU 42 42 42 GLU GLU A . n A 1 43 PRO 43 43 43 PRO PRO A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 THR 46 46 46 THR THR A . n A 1 47 CYS 47 47 47 CYS CYS A . n A 1 48 TYR 48 48 48 TYR TYR A . n A 1 49 MET 49 49 49 MET MET A . n A 1 50 TYR 50 50 50 TYR TYR A . n A 1 51 CYS 51 51 51 CYS CYS A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 PHE 56 56 56 PHE PHE A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 ASN 64 64 64 ASN ASN A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 ASP 68 68 68 ASP ASP A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 MET 70 70 70 MET MET A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 PRO 75 75 75 PRO PRO A . n A 1 76 ASP 76 76 76 ASP ASP A . n A 1 77 GLN 77 77 77 GLN GLN A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 GLN 79 79 79 GLN GLN A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 ARG 81 81 81 ARG ARG A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 GLN 83 83 83 GLN GLN A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 VAL 85 85 85 VAL VAL A . n A 1 86 MET 86 86 86 MET MET A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 LYS 88 88 88 LYS LYS A . n A 1 89 CYS 89 89 89 CYS CYS A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 PRO 91 91 91 PRO PRO A . n A 1 92 THR 92 92 92 THR THR A . n A 1 93 SER 93 93 93 SER SER A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 ASP 96 96 96 ASP ASP A . n A 1 97 ASN 97 97 97 ASN ASN A . n A 1 98 CYS 98 98 98 CYS CYS A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 LYS 100 100 100 LYS LYS A . n A 1 101 ILE 101 101 101 ILE ILE A . n A 1 102 TYR 102 102 102 TYR TYR A . n A 1 103 ASN 103 103 103 ASN ASN A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 ALA 105 105 105 ALA ALA A . n A 1 106 LYS 106 106 106 LYS LYS A . n A 1 107 CYS 107 107 107 CYS CYS A . n A 1 108 VAL 108 108 108 VAL VAL A . n A 1 109 GLN 109 109 109 GLN GLN A . n A 1 110 GLU 110 110 110 GLU GLU A . n A 1 111 SER 111 111 111 SER SER A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 PRO 113 113 113 PRO PRO A . n A 1 114 ASP 114 114 114 ASP ASP A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 TRP 116 116 116 TRP TRP A . n A 1 117 PHE 117 117 117 PHE PHE A . n A 1 118 VAL 118 118 118 VAL VAL A . n A 1 119 ILE 119 119 119 ILE ILE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NBB 1 120 1 NBB NBB A . C 3 GOL 1 121 1 GOL GOL A . D 4 HOH 1 122 2 HOH HOH A . D 4 HOH 2 123 3 HOH HOH A . D 4 HOH 3 124 4 HOH HOH A . D 4 HOH 4 125 5 HOH HOH A . D 4 HOH 5 126 6 HOH HOH A . D 4 HOH 6 127 7 HOH HOH A . D 4 HOH 7 128 9 HOH HOH A . D 4 HOH 8 129 10 HOH HOH A . D 4 HOH 9 130 11 HOH HOH A . D 4 HOH 10 131 12 HOH HOH A . D 4 HOH 11 132 13 HOH HOH A . D 4 HOH 12 133 14 HOH HOH A . D 4 HOH 13 134 15 HOH HOH A . D 4 HOH 14 135 16 HOH HOH A . D 4 HOH 15 136 17 HOH HOH A . D 4 HOH 16 137 18 HOH HOH A . D 4 HOH 17 138 19 HOH HOH A . D 4 HOH 18 139 20 HOH HOH A . D 4 HOH 19 140 21 HOH HOH A . D 4 HOH 20 141 22 HOH HOH A . D 4 HOH 21 142 23 HOH HOH A . D 4 HOH 22 143 24 HOH HOH A . D 4 HOH 23 144 25 HOH HOH A . D 4 HOH 24 145 26 HOH HOH A . D 4 HOH 25 146 27 HOH HOH A . D 4 HOH 26 147 28 HOH HOH A . D 4 HOH 27 148 29 HOH HOH A . D 4 HOH 28 149 30 HOH HOH A . D 4 HOH 29 150 31 HOH HOH A . D 4 HOH 30 151 32 HOH HOH A . D 4 HOH 31 152 33 HOH HOH A . D 4 HOH 32 153 34 HOH HOH A . D 4 HOH 33 154 35 HOH HOH A . D 4 HOH 34 155 36 HOH HOH A . D 4 HOH 35 156 37 HOH HOH A . D 4 HOH 36 157 38 HOH HOH A . D 4 HOH 37 158 39 HOH HOH A . D 4 HOH 38 159 40 HOH HOH A . D 4 HOH 39 160 41 HOH HOH A . D 4 HOH 40 161 42 HOH HOH A . D 4 HOH 41 162 43 HOH HOH A . D 4 HOH 42 163 44 HOH HOH A . D 4 HOH 43 164 45 HOH HOH A . D 4 HOH 44 165 47 HOH HOH A . D 4 HOH 45 166 48 HOH HOH A . D 4 HOH 46 167 49 HOH HOH A . D 4 HOH 47 168 50 HOH HOH A . D 4 HOH 48 169 51 HOH HOH A . D 4 HOH 49 170 52 HOH HOH A . D 4 HOH 50 171 53 HOH HOH A . D 4 HOH 51 172 54 HOH HOH A . D 4 HOH 52 173 55 HOH HOH A . D 4 HOH 53 174 56 HOH HOH A . D 4 HOH 54 175 58 HOH HOH A . D 4 HOH 55 176 59 HOH HOH A . D 4 HOH 56 177 60 HOH HOH A . D 4 HOH 57 178 61 HOH HOH A . D 4 HOH 58 179 62 HOH HOH A . D 4 HOH 59 180 63 HOH HOH A . D 4 HOH 60 181 64 HOH HOH A . D 4 HOH 61 182 65 HOH HOH A . D 4 HOH 62 183 66 HOH HOH A . D 4 HOH 63 184 67 HOH HOH A . D 4 HOH 64 185 68 HOH HOH A . D 4 HOH 65 186 69 HOH HOH A . D 4 HOH 66 187 70 HOH HOH A . D 4 HOH 67 188 71 HOH HOH A . D 4 HOH 68 189 72 HOH HOH A . D 4 HOH 69 190 74 HOH HOH A . D 4 HOH 70 191 75 HOH HOH A . D 4 HOH 71 192 76 HOH HOH A . D 4 HOH 72 193 78 HOH HOH A . D 4 HOH 73 194 79 HOH HOH A . D 4 HOH 74 195 81 HOH HOH A . D 4 HOH 75 196 82 HOH HOH A . D 4 HOH 76 197 87 HOH HOH A . D 4 HOH 77 198 88 HOH HOH A . D 4 HOH 78 199 89 HOH HOH A . D 4 HOH 79 200 90 HOH HOH A . D 4 HOH 80 201 91 HOH HOH A . D 4 HOH 81 202 93 HOH HOH A . D 4 HOH 82 203 94 HOH HOH A . D 4 HOH 83 204 95 HOH HOH A . D 4 HOH 84 205 96 HOH HOH A . D 4 HOH 85 206 97 HOH HOH A . D 4 HOH 86 207 98 HOH HOH A . D 4 HOH 87 208 101 HOH HOH A . D 4 HOH 88 209 103 HOH HOH A . D 4 HOH 89 210 104 HOH HOH A . D 4 HOH 90 211 111 HOH HOH A . D 4 HOH 91 212 113 HOH HOH A . D 4 HOH 92 213 120 HOH HOH A . D 4 HOH 93 214 121 HOH HOH A . D 4 HOH 94 215 125 HOH HOH A . D 4 HOH 95 216 126 HOH HOH A . D 4 HOH 96 217 133 HOH HOH A . D 4 HOH 97 218 136 HOH HOH A . D 4 HOH 98 219 140 HOH HOH A . D 4 HOH 99 220 156 HOH HOH A . D 4 HOH 100 221 231 HOH HOH A . D 4 HOH 101 222 233 HOH HOH A . D 4 HOH 102 223 234 HOH HOH A . D 4 HOH 103 224 236 HOH HOH A . D 4 HOH 104 225 239 HOH HOH A . D 4 HOH 105 226 240 HOH HOH A . D 4 HOH 106 227 241 HOH HOH A . D 4 HOH 107 228 242 HOH HOH A . D 4 HOH 108 229 244 HOH HOH A . D 4 HOH 109 230 245 HOH HOH A . D 4 HOH 110 231 247 HOH HOH A . D 4 HOH 111 232 250 HOH HOH A . D 4 HOH 112 233 252 HOH HOH A . D 4 HOH 113 234 253 HOH HOH A . D 4 HOH 114 235 254 HOH HOH A . D 4 HOH 115 236 257 HOH HOH A . D 4 HOH 116 237 259 HOH HOH A . D 4 HOH 117 238 268 HOH HOH A . D 4 HOH 118 239 270 HOH HOH A . D 4 HOH 119 240 277 HOH HOH A . D 4 HOH 120 241 279 HOH HOH A . D 4 HOH 121 242 281 HOH HOH A . D 4 HOH 122 243 282 HOH HOH A . D 4 HOH 123 244 283 HOH HOH A . D 4 HOH 124 245 284 HOH HOH A . D 4 HOH 125 246 289 HOH HOH A . D 4 HOH 126 247 292 HOH HOH A . D 4 HOH 127 248 294 HOH HOH A . D 4 HOH 128 249 301 HOH HOH A . D 4 HOH 129 250 310 HOH HOH A . D 4 HOH 130 251 314 HOH HOH A . D 4 HOH 131 252 317 HOH HOH A . D 4 HOH 132 253 320 HOH HOH A . D 4 HOH 133 254 321 HOH HOH A . D 4 HOH 134 255 322 HOH HOH A . D 4 HOH 135 256 326 HOH HOH A . D 4 HOH 136 257 328 HOH HOH A . D 4 HOH 137 258 338 HOH HOH A . D 4 HOH 138 259 339 HOH HOH A . D 4 HOH 139 260 340 HOH HOH A . D 4 HOH 140 261 342 HOH HOH A . D 4 HOH 141 262 345 HOH HOH A . D 4 HOH 142 263 346 HOH HOH A . D 4 HOH 143 264 347 HOH HOH A . D 4 HOH 144 265 349 HOH HOH A . D 4 HOH 145 266 350 HOH HOH A . D 4 HOH 146 267 352 HOH HOH A . D 4 HOH 147 268 353 HOH HOH A . D 4 HOH 148 269 354 HOH HOH A . D 4 HOH 149 270 356 HOH HOH A . D 4 HOH 150 271 357 HOH HOH A . D 4 HOH 151 272 359 HOH HOH A . D 4 HOH 152 273 360 HOH HOH A . D 4 HOH 153 274 361 HOH HOH A . D 4 HOH 154 275 362 HOH HOH A . D 4 HOH 155 276 363 HOH HOH A . D 4 HOH 156 277 364 HOH HOH A . D 4 HOH 157 278 365 HOH HOH A . D 4 HOH 158 279 366 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 221 ? D HOH . 2 1 A HOH 229 ? D HOH . 3 1 A HOH 260 ? D HOH . 4 1 A HOH 261 ? D HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-12-18 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 11.4080 11.7250 -4.9170 -0.3563 -0.1821 -0.1738 -0.0691 -0.0238 0.0241 1.5644 2.8798 4.9897 -0.7131 0.7883 -2.1284 -0.0279 0.0382 0.2414 0.1621 -0.2743 -0.3601 -0.4160 0.6279 0.3022 'X-RAY DIFFRACTION' 2 ? refined 19.5600 18.7030 9.2030 -0.1521 0.1391 -0.0849 -0.2236 0.0081 -0.1039 14.4987 1.4905 2.8145 0.1734 -5.0735 0.7752 -0.4248 0.4353 -0.5238 -0.2442 0.2436 -0.2549 0.4237 -0.0292 0.1812 'X-RAY DIFFRACTION' 3 ? refined 7.0650 15.6690 4.5370 -0.2494 -0.1862 -0.2138 -0.0569 -0.0074 -0.0156 5.4872 8.7289 6.7579 1.6413 1.5349 1.8479 -0.1126 -0.1397 0.3552 -0.0040 -0.0213 -0.1606 -0.8839 0.3305 0.1339 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 3 A 3 A 69 A 69 ? 'X-RAY DIFFRACTION' ? 2 2 A 70 A 70 A 88 A 88 ? 'X-RAY DIFFRACTION' ? 3 3 A 89 A 89 A 119 A 119 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 DENZO 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 SOLVE phasing . ? 4 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 60 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -103.49 _pdbx_validate_torsion.psi -164.66 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 1 ? A ALA 1 2 1 Y 1 A PRO 2 ? A PRO 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 N-BUTYL-BENZENESULFONAMIDE NBB 3 GLYCEROL GOL 4 water HOH #