data_3BK5 # _entry.id 3BK5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3BK5 RCSB RCSB045619 WWPDB D_1000045619 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC87289.2 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3BK5 _pdbx_database_status.recvd_initial_deposition_date 2007-12-05 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wu, R.' 1 'Abdullah, J.' 2 'Joachimiak, A.' 3 'Midwest Center for Structural Genomics (MCSG)' 4 # _citation.id primary _citation.title 'The crystal structure of putative outer membrane lipoprotein-sorting protein domain from Vibrio parahaemolyticus.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Wu, R.' 1 primary 'Abdullah, J.' 2 primary 'Joachimiak, A.' 3 # _cell.entry_id 3BK5 _cell.length_a 48.157 _cell.length_b 128.874 _cell.length_c 41.968 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3BK5 _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'putative outer membrane lipoprotein-sorting protein' 27700.180 1 ? ? 'Residues 28-261' ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 water nat water 18.015 203 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNAEKGLEIAQERKARDEGWGDSIAT(MSE)E(MSE)ILKNAQGESSTRL(MSE)RLKSLEVEGDGDKGLTIFDQPRDVT GTAFLNHSHTIGADDQWLYLPALKRVKRISSRNKSGPF(MSE)GSEFAYEDLSSFEIEKYRFNHLKDEKFNGQDVFVLEQ IPTDKNSGYTKQVVWLDKAHYRPLKVEFYDRKGALLKTLTFANYKQYLDKYWRAHT(MSE)A(MSE)TNHQTGKSTELNT SDLRFQTGLEENDFNKNVLKR ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAEKGLEIAQERKARDEGWGDSIATMEMILKNAQGESSTRLMRLKSLEVEGDGDKGLTIFDQPRDVTGTAFLNHSHTIG ADDQWLYLPALKRVKRISSRNKSGPFMGSEFAYEDLSSFEIEKYRFNHLKDEKFNGQDVFVLEQIPTDKNSGYTKQVVWL DKAHYRPLKVEFYDRKGALLKTLTFANYKQYLDKYWRAHTMAMTNHQTGKSTELNTSDLRFQTGLEENDFNKNVLKR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC87289.2 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 GLU n 1 5 LYS n 1 6 GLY n 1 7 LEU n 1 8 GLU n 1 9 ILE n 1 10 ALA n 1 11 GLN n 1 12 GLU n 1 13 ARG n 1 14 LYS n 1 15 ALA n 1 16 ARG n 1 17 ASP n 1 18 GLU n 1 19 GLY n 1 20 TRP n 1 21 GLY n 1 22 ASP n 1 23 SER n 1 24 ILE n 1 25 ALA n 1 26 THR n 1 27 MSE n 1 28 GLU n 1 29 MSE n 1 30 ILE n 1 31 LEU n 1 32 LYS n 1 33 ASN n 1 34 ALA n 1 35 GLN n 1 36 GLY n 1 37 GLU n 1 38 SER n 1 39 SER n 1 40 THR n 1 41 ARG n 1 42 LEU n 1 43 MSE n 1 44 ARG n 1 45 LEU n 1 46 LYS n 1 47 SER n 1 48 LEU n 1 49 GLU n 1 50 VAL n 1 51 GLU n 1 52 GLY n 1 53 ASP n 1 54 GLY n 1 55 ASP n 1 56 LYS n 1 57 GLY n 1 58 LEU n 1 59 THR n 1 60 ILE n 1 61 PHE n 1 62 ASP n 1 63 GLN n 1 64 PRO n 1 65 ARG n 1 66 ASP n 1 67 VAL n 1 68 THR n 1 69 GLY n 1 70 THR n 1 71 ALA n 1 72 PHE n 1 73 LEU n 1 74 ASN n 1 75 HIS n 1 76 SER n 1 77 HIS n 1 78 THR n 1 79 ILE n 1 80 GLY n 1 81 ALA n 1 82 ASP n 1 83 ASP n 1 84 GLN n 1 85 TRP n 1 86 LEU n 1 87 TYR n 1 88 LEU n 1 89 PRO n 1 90 ALA n 1 91 LEU n 1 92 LYS n 1 93 ARG n 1 94 VAL n 1 95 LYS n 1 96 ARG n 1 97 ILE n 1 98 SER n 1 99 SER n 1 100 ARG n 1 101 ASN n 1 102 LYS n 1 103 SER n 1 104 GLY n 1 105 PRO n 1 106 PHE n 1 107 MSE n 1 108 GLY n 1 109 SER n 1 110 GLU n 1 111 PHE n 1 112 ALA n 1 113 TYR n 1 114 GLU n 1 115 ASP n 1 116 LEU n 1 117 SER n 1 118 SER n 1 119 PHE n 1 120 GLU n 1 121 ILE n 1 122 GLU n 1 123 LYS n 1 124 TYR n 1 125 ARG n 1 126 PHE n 1 127 ASN n 1 128 HIS n 1 129 LEU n 1 130 LYS n 1 131 ASP n 1 132 GLU n 1 133 LYS n 1 134 PHE n 1 135 ASN n 1 136 GLY n 1 137 GLN n 1 138 ASP n 1 139 VAL n 1 140 PHE n 1 141 VAL n 1 142 LEU n 1 143 GLU n 1 144 GLN n 1 145 ILE n 1 146 PRO n 1 147 THR n 1 148 ASP n 1 149 LYS n 1 150 ASN n 1 151 SER n 1 152 GLY n 1 153 TYR n 1 154 THR n 1 155 LYS n 1 156 GLN n 1 157 VAL n 1 158 VAL n 1 159 TRP n 1 160 LEU n 1 161 ASP n 1 162 LYS n 1 163 ALA n 1 164 HIS n 1 165 TYR n 1 166 ARG n 1 167 PRO n 1 168 LEU n 1 169 LYS n 1 170 VAL n 1 171 GLU n 1 172 PHE n 1 173 TYR n 1 174 ASP n 1 175 ARG n 1 176 LYS n 1 177 GLY n 1 178 ALA n 1 179 LEU n 1 180 LEU n 1 181 LYS n 1 182 THR n 1 183 LEU n 1 184 THR n 1 185 PHE n 1 186 ALA n 1 187 ASN n 1 188 TYR n 1 189 LYS n 1 190 GLN n 1 191 TYR n 1 192 LEU n 1 193 ASP n 1 194 LYS n 1 195 TYR n 1 196 TRP n 1 197 ARG n 1 198 ALA n 1 199 HIS n 1 200 THR n 1 201 MSE n 1 202 ALA n 1 203 MSE n 1 204 THR n 1 205 ASN n 1 206 HIS n 1 207 GLN n 1 208 THR n 1 209 GLY n 1 210 LYS n 1 211 SER n 1 212 THR n 1 213 GLU n 1 214 LEU n 1 215 ASN n 1 216 THR n 1 217 SER n 1 218 ASP n 1 219 LEU n 1 220 ARG n 1 221 PHE n 1 222 GLN n 1 223 THR n 1 224 GLY n 1 225 LEU n 1 226 GLU n 1 227 GLU n 1 228 ASN n 1 229 ASP n 1 230 PHE n 1 231 ASN n 1 232 LYS n 1 233 ASN n 1 234 VAL n 1 235 LEU n 1 236 LYS n 1 237 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Vibrio _entity_src_gen.pdbx_gene_src_gene VP1287 _entity_src_gen.gene_src_species 'Vibrio parahaemolyticus' _entity_src_gen.gene_src_strain 'RIMD 2210633 / Serotype O3:K6' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Vibrio parahaemolyticus RIMD 2210633' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 223926 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pDM68 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q87Q63_VIBPA _struct_ref.pdbx_db_accession Q87Q63 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EKGLEIAQERKARDEGWGDSIATMEMILKNAQGESSTRLMRLKSLEVEGDGDKGLTIFDQPRDVTGTAFLNHSHTIGADD QWLYLPALKRVKRISSRNKSGPFMGSEFAYEDLSSFEIEKYRFNHLKDEKFNGQDVFVLEQIPTDKNSGYTKQVVWLDKA HYRPLKVEFYDRKGALLKTLTFANYKQYLDKYWRAHTMAMTNHQTGKSTELNTSDLRFQTGLEENDFNKNVLKR ; _struct_ref.pdbx_align_begin 28 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3BK5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 237 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q87Q63 _struct_ref_seq.db_align_beg 28 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 261 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 234 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3BK5 SER A 1 ? UNP Q87Q63 ? ? 'EXPRESSION TAG' -2 1 1 3BK5 ASN A 2 ? UNP Q87Q63 ? ? 'EXPRESSION TAG' -1 2 1 3BK5 ALA A 3 ? UNP Q87Q63 ? ? 'EXPRESSION TAG' 0 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3BK5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.35 _exptl_crystal.density_percent_sol 47.68 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pdbx_details '0.1M Na acetate, 20% PEG 8000, 0.2M MgCl2, pH 4.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2007-06-17 _diffrn_detector.details Mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111) channel' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97980 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97980 # _reflns.entry_id 3BK5 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.0 _reflns.d_resolution_low 50 _reflns.number_all 18340 _reflns.number_obs 17574 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs 0.161 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 16.8 _reflns.B_iso_Wilson_estimate 28.45 _reflns.pdbx_redundancy 7.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.0 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 97.1 _reflns_shell.Rmerge_I_obs 0.493 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.pdbx_redundancy 4.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1731 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3BK5 _refine.ls_number_reflns_obs 17275 _refine.ls_number_reflns_all 17275 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 41.96 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 98.83 _refine.ls_R_factor_obs 0.18147 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17918 _refine.ls_R_factor_R_free 0.22646 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 937 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.960 _refine.correlation_coeff_Fo_to_Fc_free 0.935 _refine.B_iso_mean 30.771 _refine.aniso_B[1][1] -0.63 _refine.aniso_B[2][2] -0.72 _refine.aniso_B[3][3] 1.35 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.181 _refine.pdbx_overall_ESU_R_Free 0.163 _refine.overall_SU_ML 0.117 _refine.overall_SU_B 8.004 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1920 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 203 _refine_hist.number_atoms_total 2124 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 41.96 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.022 ? 1979 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.641 1.947 ? 2661 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 9.325 5.000 ? 237 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.487 24.327 ? 104 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.228 15.000 ? 372 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 22.270 15.000 ? 14 'X-RAY DIFFRACTION' ? r_chiral_restr 0.120 0.200 ? 279 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.020 ? 1506 'X-RAY DIFFRACTION' ? r_nbd_refined 0.213 0.200 ? 769 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.306 0.200 ? 1302 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.168 0.200 ? 175 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.028 0.200 ? 1 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.254 0.200 ? 33 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.189 0.200 ? 9 'X-RAY DIFFRACTION' ? r_mcbond_it 1.002 1.500 ? 1219 'X-RAY DIFFRACTION' ? r_mcangle_it 1.546 2.000 ? 1887 'X-RAY DIFFRACTION' ? r_scbond_it 2.501 3.000 ? 876 'X-RAY DIFFRACTION' ? r_scangle_it 3.812 4.500 ? 774 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.00 _refine_ls_shell.d_res_low 2.05 _refine_ls_shell.number_reflns_R_work 1128 _refine_ls_shell.R_factor_R_work 0.217 _refine_ls_shell.percent_reflns_obs 92.26 _refine_ls_shell.R_factor_R_free 0.261 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 76 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1204 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3BK5 _struct.title 'Crystal structure of putative outer membrane lipoprotein-sorting protein domain from Vibrio parahaemolyticus' _struct.pdbx_descriptor 'putative outer membrane lipoprotein-sorting protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3BK5 _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;Putative outer membrane protein domain, PSI-2, Protein Structure Initiative, Structural Genomics, Midwest Center for Structural Genomics (MCSG), UNKNOWN FUNCTION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 2 ? ARG A 16 ? ASN A -1 ARG A 13 1 ? 15 HELX_P HELX_P2 2 SER A 98 ? LYS A 102 ? SER A 95 LYS A 99 5 ? 5 HELX_P HELX_P3 3 ALA A 112 ? SER A 117 ? ALA A 109 SER A 114 5 ? 6 HELX_P HELX_P4 4 GLU A 120 ? GLU A 122 ? GLU A 117 GLU A 119 5 ? 3 HELX_P HELX_P5 5 GLU A 226 ? LEU A 235 ? GLU A 223 LEU A 232 5 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A HIS 128 NE2 ? ? ? 1_555 B MG . MG ? ? A HIS 125 A MG 235 1_555 ? ? ? ? ? ? ? 2.002 ? metalc2 metalc ? ? A ASP 131 OD1 ? ? ? 1_555 B MG . MG ? ? A ASP 128 A MG 235 1_555 ? ? ? ? ? ? ? 2.398 ? covale1 covale ? ? A THR 26 C ? ? ? 1_555 A MSE 27 N ? ? A THR 23 A MSE 24 1_555 ? ? ? ? ? ? ? 1.329 ? covale2 covale ? ? A MSE 27 C ? ? ? 1_555 A GLU 28 N ? ? A MSE 24 A GLU 25 1_555 ? ? ? ? ? ? ? 1.313 ? covale3 covale ? ? A GLU 28 C ? ? ? 1_555 A MSE 29 N ? ? A GLU 25 A MSE 26 1_555 ? ? ? ? ? ? ? 1.331 ? covale4 covale ? ? A MSE 29 C ? ? ? 1_555 A ILE 30 N ? ? A MSE 26 A ILE 27 1_555 ? ? ? ? ? ? ? 1.330 ? covale5 covale ? ? A LEU 42 C ? ? ? 1_555 A MSE 43 N ? ? A LEU 39 A MSE 40 1_555 ? ? ? ? ? ? ? 1.330 ? covale6 covale ? ? A MSE 43 C ? ? ? 1_555 A ARG 44 N ? ? A MSE 40 A ARG 41 1_555 ? ? ? ? ? ? ? 1.321 ? covale7 covale ? ? A PHE 106 C ? ? ? 1_555 A MSE 107 N A ? A PHE 103 A MSE 104 1_555 ? ? ? ? ? ? ? 1.334 ? covale8 covale ? ? A PHE 106 C ? ? ? 1_555 A MSE 107 N B ? A PHE 103 A MSE 104 1_555 ? ? ? ? ? ? ? 1.335 ? covale9 covale ? ? A MSE 107 C A ? ? 1_555 A GLY 108 N ? ? A MSE 104 A GLY 105 1_555 ? ? ? ? ? ? ? 1.323 ? covale10 covale ? ? A MSE 107 C B ? ? 1_555 A GLY 108 N ? ? A MSE 104 A GLY 105 1_555 ? ? ? ? ? ? ? 1.335 ? covale11 covale ? ? A THR 200 C ? ? ? 1_555 A MSE 201 N ? ? A THR 197 A MSE 198 1_555 ? ? ? ? ? ? ? 1.324 ? covale12 covale ? ? A MSE 201 C ? ? ? 1_555 A ALA 202 N ? ? A MSE 198 A ALA 199 1_555 ? ? ? ? ? ? ? 1.335 ? covale13 covale ? ? A ALA 202 C ? ? ? 1_555 A MSE 203 N ? ? A ALA 199 A MSE 200 1_555 ? ? ? ? ? ? ? 1.338 ? covale14 covale ? ? A MSE 203 C ? ? ? 1_555 A THR 204 N ? ? A MSE 200 A THR 201 1_555 ? ? ? ? ? ? ? 1.326 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLN _struct_mon_prot_cis.label_seq_id 63 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLN _struct_mon_prot_cis.auth_seq_id 60 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 64 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 61 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -7.12 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 13 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel A 10 11 ? anti-parallel A 11 12 ? anti-parallel A 12 13 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 93 ? ARG A 96 ? ARG A 90 ARG A 93 A 2 ASP A 83 ? LEU A 88 ? ASP A 80 LEU A 85 A 3 ALA A 71 ? HIS A 75 ? ALA A 68 HIS A 72 A 4 LYS A 56 ? GLN A 63 ? LYS A 53 GLN A 60 A 5 SER A 39 ? LEU A 48 ? SER A 36 LEU A 45 A 6 ASP A 22 ? LYS A 32 ? ASP A 19 LYS A 29 A 7 SER A 211 ? PHE A 221 ? SER A 208 PHE A 218 A 8 TYR A 195 ? ASN A 205 ? TYR A 192 ASN A 202 A 9 LEU A 179 ? TYR A 191 ? LEU A 176 TYR A 188 A 10 PRO A 167 ? ASP A 174 ? PRO A 164 ASP A 171 A 11 TYR A 153 ? ASP A 161 ? TYR A 150 ASP A 158 A 12 GLN A 137 ? PRO A 146 ? GLN A 134 PRO A 143 A 13 TYR A 124 ? PHE A 134 ? TYR A 121 PHE A 131 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LYS A 95 ? O LYS A 92 N LEU A 86 ? N LEU A 83 A 2 3 O TYR A 87 ? O TYR A 84 N ALA A 71 ? N ALA A 68 A 3 4 O PHE A 72 ? O PHE A 69 N THR A 59 ? N THR A 56 A 4 5 O ASP A 62 ? O ASP A 59 N LEU A 42 ? N LEU A 39 A 5 6 O SER A 39 ? O SER A 36 N LEU A 31 ? N LEU A 28 A 6 7 N LYS A 32 ? N LYS A 29 O SER A 211 ? O SER A 208 A 7 8 O LEU A 214 ? O LEU A 211 N MSE A 201 ? N MSE A 198 A 8 9 O TYR A 195 ? O TYR A 192 N TYR A 191 ? N TYR A 188 A 9 10 O LEU A 180 ? O LEU A 177 N PHE A 172 ? N PHE A 169 A 10 11 O LEU A 168 ? O LEU A 165 N TRP A 159 ? N TRP A 156 A 11 12 O LEU A 160 ? O LEU A 157 N PHE A 140 ? N PHE A 137 A 12 13 O VAL A 139 ? O VAL A 136 N GLU A 132 ? N GLU A 129 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE MG A 235' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 LYS A 5 ? LYS A 2 . ? 1_555 ? 2 AC1 4 HIS A 128 ? HIS A 125 . ? 1_555 ? 3 AC1 4 LYS A 130 ? LYS A 127 . ? 1_555 ? 4 AC1 4 ASP A 131 ? ASP A 128 . ? 1_555 ? # _database_PDB_matrix.entry_id 3BK5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3BK5 _atom_sites.fract_transf_matrix[1][1] 0.020765 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007760 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023828 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 ASN 2 -1 -1 ASN ASN A . n A 1 3 ALA 3 0 0 ALA ALA A . n A 1 4 GLU 4 1 1 GLU GLU A . n A 1 5 LYS 5 2 2 LYS LYS A . n A 1 6 GLY 6 3 3 GLY GLY A . n A 1 7 LEU 7 4 4 LEU LEU A . n A 1 8 GLU 8 5 5 GLU GLU A . n A 1 9 ILE 9 6 6 ILE ILE A . n A 1 10 ALA 10 7 7 ALA VAL A . n A 1 11 GLN 11 8 8 GLN GLN A . n A 1 12 GLU 12 9 9 GLU GLU A . n A 1 13 ARG 13 10 10 ARG ARG A . n A 1 14 LYS 14 11 11 LYS LYS A . n A 1 15 ALA 15 12 12 ALA ALA A . n A 1 16 ARG 16 13 13 ARG ARG A . n A 1 17 ASP 17 14 14 ASP ASP A . n A 1 18 GLU 18 15 15 GLU GLU A . n A 1 19 GLY 19 16 16 GLY GLY A . n A 1 20 TRP 20 17 17 TRP TRP A . n A 1 21 GLY 21 18 18 GLY GLY A . n A 1 22 ASP 22 19 19 ASP ASP A . n A 1 23 SER 23 20 20 SER SER A . n A 1 24 ILE 24 21 21 ILE ILE A . n A 1 25 ALA 25 22 22 ALA ALA A . n A 1 26 THR 26 23 23 THR THR A . n A 1 27 MSE 27 24 24 MSE MSE A . n A 1 28 GLU 28 25 25 GLU GLU A . n A 1 29 MSE 29 26 26 MSE MSE A . n A 1 30 ILE 30 27 27 ILE ILE A . n A 1 31 LEU 31 28 28 LEU LEU A . n A 1 32 LYS 32 29 29 LYS LYS A . n A 1 33 ASN 33 30 30 ASN ASN A . n A 1 34 ALA 34 31 31 ALA ALA A . n A 1 35 GLN 35 32 32 GLN GLN A . n A 1 36 GLY 36 33 ? ? ? A . n A 1 37 GLU 37 34 34 GLU GLU A . n A 1 38 SER 38 35 35 SER SER A . n A 1 39 SER 39 36 36 SER SER A . n A 1 40 THR 40 37 37 THR THR A . n A 1 41 ARG 41 38 38 ARG ARG A . n A 1 42 LEU 42 39 39 LEU LEU A . n A 1 43 MSE 43 40 40 MSE MSE A . n A 1 44 ARG 44 41 41 ARG ARG A . n A 1 45 LEU 45 42 42 LEU LEU A . n A 1 46 LYS 46 43 43 LYS LYS A . n A 1 47 SER 47 44 44 SER SER A . n A 1 48 LEU 48 45 45 LEU LEU A . n A 1 49 GLU 49 46 46 GLU GLU A . n A 1 50 VAL 50 47 47 VAL VAL A . n A 1 51 GLU 51 48 48 GLU GLU A . n A 1 52 GLY 52 49 49 GLY GLY A . n A 1 53 ASP 53 50 50 ASP ASP A . n A 1 54 GLY 54 51 51 GLY GLY A . n A 1 55 ASP 55 52 52 ASP ASP A . n A 1 56 LYS 56 53 53 LYS LYS A . n A 1 57 GLY 57 54 54 GLY GLY A . n A 1 58 LEU 58 55 55 LEU LEU A . n A 1 59 THR 59 56 56 THR THR A . n A 1 60 ILE 60 57 57 ILE ILE A . n A 1 61 PHE 61 58 58 PHE PHE A . n A 1 62 ASP 62 59 59 ASP ASP A . n A 1 63 GLN 63 60 60 GLN GLN A . n A 1 64 PRO 64 61 61 PRO PRO A . n A 1 65 ARG 65 62 62 ARG ARG A . n A 1 66 ASP 66 63 63 ASP ASP A . n A 1 67 VAL 67 64 64 VAL VAL A . n A 1 68 THR 68 65 65 THR THR A . n A 1 69 GLY 69 66 66 GLY GLY A . n A 1 70 THR 70 67 67 THR THR A . n A 1 71 ALA 71 68 68 ALA ALA A . n A 1 72 PHE 72 69 69 PHE PHE A . n A 1 73 LEU 73 70 70 LEU LEU A . n A 1 74 ASN 74 71 71 ASN ASN A . n A 1 75 HIS 75 72 72 HIS HIS A . n A 1 76 SER 76 73 73 SER SER A . n A 1 77 HIS 77 74 74 HIS HIS A . n A 1 78 THR 78 75 75 THR THR A . n A 1 79 ILE 79 76 76 ILE ILE A . n A 1 80 GLY 80 77 77 GLY GLY A . n A 1 81 ALA 81 78 78 ALA ALA A . n A 1 82 ASP 82 79 79 ASP ASP A . n A 1 83 ASP 83 80 80 ASP ASP A . n A 1 84 GLN 84 81 81 GLN GLN A . n A 1 85 TRP 85 82 82 TRP TRP A . n A 1 86 LEU 86 83 83 LEU LEU A . n A 1 87 TYR 87 84 84 TYR TYR A . n A 1 88 LEU 88 85 85 LEU LEU A . n A 1 89 PRO 89 86 86 PRO PRO A . n A 1 90 ALA 90 87 87 ALA ALA A . n A 1 91 LEU 91 88 88 LEU LEU A . n A 1 92 LYS 92 89 89 LYS LYS A . n A 1 93 ARG 93 90 90 ARG ARG A . n A 1 94 VAL 94 91 91 VAL VAL A . n A 1 95 LYS 95 92 92 LYS LYS A . n A 1 96 ARG 96 93 93 ARG ARG A . n A 1 97 ILE 97 94 94 ILE ILE A . n A 1 98 SER 98 95 95 SER SER A . n A 1 99 SER 99 96 96 SER SER A . n A 1 100 ARG 100 97 97 ARG ARG A . n A 1 101 ASN 101 98 98 ASN ASN A . n A 1 102 LYS 102 99 99 LYS LYS A . n A 1 103 SER 103 100 100 SER SER A . n A 1 104 GLY 104 101 101 GLY GLY A . n A 1 105 PRO 105 102 102 PRO PRO A . n A 1 106 PHE 106 103 103 PHE PHE A . n A 1 107 MSE 107 104 104 MSE MSE A . n A 1 108 GLY 108 105 105 GLY GLY A . n A 1 109 SER 109 106 106 SER SER A . n A 1 110 GLU 110 107 107 GLU GLU A . n A 1 111 PHE 111 108 108 PHE PHE A . n A 1 112 ALA 112 109 109 ALA ALA A . n A 1 113 TYR 113 110 110 TYR TYR A . n A 1 114 GLU 114 111 111 GLU GLU A . n A 1 115 ASP 115 112 112 ASP ASP A . n A 1 116 LEU 116 113 113 LEU LEU A . n A 1 117 SER 117 114 114 SER SER A . n A 1 118 SER 118 115 115 SER SER A . n A 1 119 PHE 119 116 116 PHE PHE A . n A 1 120 GLU 120 117 117 GLU GLU A . n A 1 121 ILE 121 118 118 ILE ILE A . n A 1 122 GLU 122 119 119 GLU GLU A . n A 1 123 LYS 123 120 120 LYS LYS A . n A 1 124 TYR 124 121 121 TYR TYR A . n A 1 125 ARG 125 122 122 ARG ARG A . n A 1 126 PHE 126 123 123 PHE PHE A . n A 1 127 ASN 127 124 124 ASN ASN A . n A 1 128 HIS 128 125 125 HIS HIS A . n A 1 129 LEU 129 126 126 LEU LEU A . n A 1 130 LYS 130 127 127 LYS LYS A . n A 1 131 ASP 131 128 128 ASP ASP A . n A 1 132 GLU 132 129 129 GLU GLU A . n A 1 133 LYS 133 130 130 LYS LYS A . n A 1 134 PHE 134 131 131 PHE PHE A . n A 1 135 ASN 135 132 132 ASN ASN A . n A 1 136 GLY 136 133 133 GLY GLY A . n A 1 137 GLN 137 134 134 GLN GLN A . n A 1 138 ASP 138 135 135 ASP ASP A . n A 1 139 VAL 139 136 136 VAL VAL A . n A 1 140 PHE 140 137 137 PHE PHE A . n A 1 141 VAL 141 138 138 VAL VAL A . n A 1 142 LEU 142 139 139 LEU LEU A . n A 1 143 GLU 143 140 140 GLU GLU A . n A 1 144 GLN 144 141 141 GLN GLN A . n A 1 145 ILE 145 142 142 ILE ILE A . n A 1 146 PRO 146 143 143 PRO PRO A . n A 1 147 THR 147 144 144 THR THR A . n A 1 148 ASP 148 145 145 ASP ASP A . n A 1 149 LYS 149 146 146 LYS LYS A . n A 1 150 ASN 150 147 147 ASN ASN A . n A 1 151 SER 151 148 148 SER SER A . n A 1 152 GLY 152 149 149 GLY GLY A . n A 1 153 TYR 153 150 150 TYR TYR A . n A 1 154 THR 154 151 151 THR THR A . n A 1 155 LYS 155 152 152 LYS LYS A . n A 1 156 GLN 156 153 153 GLN GLN A . n A 1 157 VAL 157 154 154 VAL VAL A . n A 1 158 VAL 158 155 155 VAL VAL A . n A 1 159 TRP 159 156 156 TRP TRP A . n A 1 160 LEU 160 157 157 LEU LEU A . n A 1 161 ASP 161 158 158 ASP ASP A . n A 1 162 LYS 162 159 159 LYS LYS A . n A 1 163 ALA 163 160 160 ALA ALA A . n A 1 164 HIS 164 161 161 HIS HIS A . n A 1 165 TYR 165 162 162 TYR TYR A . n A 1 166 ARG 166 163 163 ARG ARG A . n A 1 167 PRO 167 164 164 PRO PRO A . n A 1 168 LEU 168 165 165 LEU LEU A . n A 1 169 LYS 169 166 166 LYS LYS A . n A 1 170 VAL 170 167 167 VAL VAL A . n A 1 171 GLU 171 168 168 GLU GLU A . n A 1 172 PHE 172 169 169 PHE PHE A . n A 1 173 TYR 173 170 170 TYR TYR A . n A 1 174 ASP 174 171 171 ASP ASP A . n A 1 175 ARG 175 172 172 ARG ARG A . n A 1 176 LYS 176 173 173 LYS LYS A . n A 1 177 GLY 177 174 174 GLY GLY A . n A 1 178 ALA 178 175 175 ALA ALA A . n A 1 179 LEU 179 176 176 LEU LEU A . n A 1 180 LEU 180 177 177 LEU LEU A . n A 1 181 LYS 181 178 178 LYS LYS A . n A 1 182 THR 182 179 179 THR THR A . n A 1 183 LEU 183 180 180 LEU LEU A . n A 1 184 THR 184 181 181 THR THR A . n A 1 185 PHE 185 182 182 PHE PHE A . n A 1 186 ALA 186 183 183 ALA ALA A . n A 1 187 ASN 187 184 184 ASN ASN A . n A 1 188 TYR 188 185 185 TYR TYR A . n A 1 189 LYS 189 186 186 LYS LYS A . n A 1 190 GLN 190 187 187 GLN GLN A . n A 1 191 TYR 191 188 188 TYR TYR A . n A 1 192 LEU 192 189 189 LEU LEU A . n A 1 193 ASP 193 190 190 ASP ASP A . n A 1 194 LYS 194 191 191 LYS LYS A . n A 1 195 TYR 195 192 192 TYR TYR A . n A 1 196 TRP 196 193 193 TRP TRP A . n A 1 197 ARG 197 194 194 ARG ARG A . n A 1 198 ALA 198 195 195 ALA ALA A . n A 1 199 HIS 199 196 196 HIS HIS A . n A 1 200 THR 200 197 197 THR THR A . n A 1 201 MSE 201 198 198 MSE MSE A . n A 1 202 ALA 202 199 199 ALA ALA A . n A 1 203 MSE 203 200 200 MSE MSE A . n A 1 204 THR 204 201 201 THR THR A . n A 1 205 ASN 205 202 202 ASN ASN A . n A 1 206 HIS 206 203 203 HIS HIS A . n A 1 207 GLN 207 204 204 GLN GLN A . n A 1 208 THR 208 205 205 THR THR A . n A 1 209 GLY 209 206 206 GLY GLY A . n A 1 210 LYS 210 207 207 LYS LYS A . n A 1 211 SER 211 208 208 SER SER A . n A 1 212 THR 212 209 209 THR THR A . n A 1 213 GLU 213 210 210 GLU GLU A . n A 1 214 LEU 214 211 211 LEU LEU A . n A 1 215 ASN 215 212 212 ASN ASN A . n A 1 216 THR 216 213 213 THR THR A . n A 1 217 SER 217 214 214 SER SER A . n A 1 218 ASP 218 215 215 ASP ASP A . n A 1 219 LEU 219 216 216 LEU LEU A . n A 1 220 ARG 220 217 217 ARG ARG A . n A 1 221 PHE 221 218 218 PHE PHE A . n A 1 222 GLN 222 219 219 GLN GLN A . n A 1 223 THR 223 220 220 THR THR A . n A 1 224 GLY 224 221 221 GLY GLY A . n A 1 225 LEU 225 222 222 LEU LEU A . n A 1 226 GLU 226 223 223 GLU GLU A . n A 1 227 GLU 227 224 224 GLU GLU A . n A 1 228 ASN 228 225 225 ASN ASN A . n A 1 229 ASP 229 226 226 ASP ASP A . n A 1 230 PHE 230 227 227 PHE PHE A . n A 1 231 ASN 231 228 228 ASN ASN A . n A 1 232 LYS 232 229 229 LYS LYS A . n A 1 233 ASN 233 230 230 ASN ASN A . n A 1 234 VAL 234 231 231 VAL VAL A . n A 1 235 LEU 235 232 232 LEU LEU A . n A 1 236 LYS 236 233 233 LYS LYS A . n A 1 237 ARG 237 234 234 ARG ARG A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 235 1 MG MG A . C 3 HOH 1 236 17 HOH HOH A . C 3 HOH 2 237 20 HOH HOH A . C 3 HOH 3 238 53 HOH HOH A . C 3 HOH 4 239 55 HOH HOH A . C 3 HOH 5 240 61 HOH HOH A . C 3 HOH 6 241 67 HOH HOH A . C 3 HOH 7 242 68 HOH HOH A . C 3 HOH 8 243 69 HOH HOH A . C 3 HOH 9 244 71 HOH HOH A . C 3 HOH 10 245 72 HOH HOH A . C 3 HOH 11 246 74 HOH HOH A . C 3 HOH 12 247 75 HOH HOH A . C 3 HOH 13 248 77 HOH HOH A . C 3 HOH 14 249 78 HOH HOH A . C 3 HOH 15 250 83 HOH HOH A . C 3 HOH 16 251 85 HOH HOH A . C 3 HOH 17 252 87 HOH HOH A . C 3 HOH 18 253 88 HOH HOH A . C 3 HOH 19 254 90 HOH HOH A . C 3 HOH 20 255 92 HOH HOH A . C 3 HOH 21 256 94 HOH HOH A . C 3 HOH 22 257 96 HOH HOH A . C 3 HOH 23 258 98 HOH HOH A . C 3 HOH 24 259 100 HOH HOH A . C 3 HOH 25 260 101 HOH HOH A . C 3 HOH 26 261 102 HOH HOH A . C 3 HOH 27 262 103 HOH HOH A . C 3 HOH 28 263 104 HOH HOH A . C 3 HOH 29 264 105 HOH HOH A . C 3 HOH 30 265 106 HOH HOH A . C 3 HOH 31 266 111 HOH HOH A . C 3 HOH 32 267 114 HOH HOH A . C 3 HOH 33 268 116 HOH HOH A . C 3 HOH 34 269 118 HOH HOH A . C 3 HOH 35 270 120 HOH HOH A . C 3 HOH 36 271 121 HOH HOH A . C 3 HOH 37 272 123 HOH HOH A . C 3 HOH 38 273 125 HOH HOH A . C 3 HOH 39 274 127 HOH HOH A . C 3 HOH 40 275 129 HOH HOH A . C 3 HOH 41 276 130 HOH HOH A . C 3 HOH 42 277 131 HOH HOH A . C 3 HOH 43 278 132 HOH HOH A . C 3 HOH 44 279 133 HOH HOH A . C 3 HOH 45 280 134 HOH HOH A . C 3 HOH 46 281 135 HOH HOH A . C 3 HOH 47 282 137 HOH HOH A . C 3 HOH 48 283 138 HOH HOH A . C 3 HOH 49 284 140 HOH HOH A . C 3 HOH 50 285 141 HOH HOH A . C 3 HOH 51 286 142 HOH HOH A . C 3 HOH 52 287 143 HOH HOH A . C 3 HOH 53 288 144 HOH HOH A . C 3 HOH 54 289 145 HOH HOH A . C 3 HOH 55 290 147 HOH HOH A . C 3 HOH 56 291 153 HOH HOH A . C 3 HOH 57 292 154 HOH HOH A . C 3 HOH 58 293 155 HOH HOH A . C 3 HOH 59 294 156 HOH HOH A . C 3 HOH 60 295 158 HOH HOH A . C 3 HOH 61 296 159 HOH HOH A . C 3 HOH 62 297 160 HOH HOH A . C 3 HOH 63 298 161 HOH HOH A . C 3 HOH 64 299 162 HOH HOH A . C 3 HOH 65 300 163 HOH HOH A . C 3 HOH 66 301 166 HOH HOH A . C 3 HOH 67 302 172 HOH HOH A . C 3 HOH 68 303 174 HOH HOH A . C 3 HOH 69 304 177 HOH HOH A . C 3 HOH 70 305 178 HOH HOH A . C 3 HOH 71 306 179 HOH HOH A . C 3 HOH 72 307 181 HOH HOH A . C 3 HOH 73 308 184 HOH HOH A . C 3 HOH 74 309 191 HOH HOH A . C 3 HOH 75 310 192 HOH HOH A . C 3 HOH 76 311 194 HOH HOH A . C 3 HOH 77 312 196 HOH HOH A . C 3 HOH 78 313 197 HOH HOH A . C 3 HOH 79 314 198 HOH HOH A . C 3 HOH 80 315 202 HOH HOH A . C 3 HOH 81 316 203 HOH HOH A . C 3 HOH 82 317 206 HOH HOH A . C 3 HOH 83 318 207 HOH HOH A . C 3 HOH 84 319 209 HOH HOH A . C 3 HOH 85 320 210 HOH HOH A . C 3 HOH 86 321 211 HOH HOH A . C 3 HOH 87 322 212 HOH HOH A . C 3 HOH 88 323 216 HOH HOH A . C 3 HOH 89 324 217 HOH HOH A . C 3 HOH 90 325 219 HOH HOH A . C 3 HOH 91 326 230 HOH HOH A . C 3 HOH 92 327 233 HOH HOH A . C 3 HOH 93 328 235 HOH HOH A . C 3 HOH 94 329 239 HOH HOH A . C 3 HOH 95 330 243 HOH HOH A . C 3 HOH 96 331 244 HOH HOH A . C 3 HOH 97 332 245 HOH HOH A . C 3 HOH 98 333 248 HOH HOH A . C 3 HOH 99 334 249 HOH HOH A . C 3 HOH 100 335 250 HOH HOH A . C 3 HOH 101 336 251 HOH HOH A . C 3 HOH 102 337 252 HOH HOH A . C 3 HOH 103 338 253 HOH HOH A . C 3 HOH 104 339 254 HOH HOH A . C 3 HOH 105 340 255 HOH HOH A . C 3 HOH 106 341 256 HOH HOH A . C 3 HOH 107 342 257 HOH HOH A . C 3 HOH 108 343 258 HOH HOH A . C 3 HOH 109 344 260 HOH HOH A . C 3 HOH 110 345 262 HOH HOH A . C 3 HOH 111 346 263 HOH HOH A . C 3 HOH 112 347 264 HOH HOH A . C 3 HOH 113 348 265 HOH HOH A . C 3 HOH 114 349 266 HOH HOH A . C 3 HOH 115 350 267 HOH HOH A . C 3 HOH 116 351 268 HOH HOH A . C 3 HOH 117 352 269 HOH HOH A . C 3 HOH 118 353 270 HOH HOH A . C 3 HOH 119 354 271 HOH HOH A . C 3 HOH 120 355 277 HOH HOH A . C 3 HOH 121 356 278 HOH HOH A . C 3 HOH 122 357 280 HOH HOH A . C 3 HOH 123 358 281 HOH HOH A . C 3 HOH 124 359 282 HOH HOH A . C 3 HOH 125 360 284 HOH HOH A . C 3 HOH 126 361 286 HOH HOH A . C 3 HOH 127 362 287 HOH HOH A . C 3 HOH 128 363 288 HOH HOH A . C 3 HOH 129 364 290 HOH HOH A . C 3 HOH 130 365 291 HOH HOH A . C 3 HOH 131 366 294 HOH HOH A . C 3 HOH 132 367 295 HOH HOH A . C 3 HOH 133 368 296 HOH HOH A . C 3 HOH 134 369 297 HOH HOH A . C 3 HOH 135 370 298 HOH HOH A . C 3 HOH 136 371 300 HOH HOH A . C 3 HOH 137 372 301 HOH HOH A . C 3 HOH 138 373 302 HOH HOH A . C 3 HOH 139 374 8 HOH HOH A . C 3 HOH 140 375 13 HOH HOH A . C 3 HOH 141 376 16 HOH HOH A . C 3 HOH 142 377 18 HOH HOH A . C 3 HOH 143 378 22 HOH HOH A . C 3 HOH 144 379 23 HOH HOH A . C 3 HOH 145 380 26 HOH HOH A . C 3 HOH 146 381 35 HOH HOH A . C 3 HOH 147 382 41 HOH HOH A . C 3 HOH 148 383 52 HOH HOH A . C 3 HOH 149 384 57 HOH HOH A . C 3 HOH 150 385 58 HOH HOH A . C 3 HOH 151 386 66 HOH HOH A . C 3 HOH 152 387 70 HOH HOH A . C 3 HOH 153 388 81 HOH HOH A . C 3 HOH 154 389 82 HOH HOH A . C 3 HOH 155 390 89 HOH HOH A . C 3 HOH 156 391 100 HOH HOH A . C 3 HOH 157 392 109 HOH HOH A . C 3 HOH 158 393 112 HOH HOH A . C 3 HOH 159 394 117 HOH HOH A . C 3 HOH 160 395 118 HOH HOH A . C 3 HOH 161 396 123 HOH HOH A . C 3 HOH 162 397 3 HOH HOH A . C 3 HOH 163 398 10 HOH HOH A . C 3 HOH 164 399 11 HOH HOH A . C 3 HOH 165 400 12 HOH HOH A . C 3 HOH 166 401 21 HOH HOH A . C 3 HOH 167 402 34 HOH HOH A . C 3 HOH 168 403 35 HOH HOH A . C 3 HOH 169 404 54 HOH HOH A . C 3 HOH 170 405 64 HOH HOH A . C 3 HOH 171 406 79 HOH HOH A . C 3 HOH 172 407 8 HOH HOH A . C 3 HOH 173 408 2 HOH HOH A . C 3 HOH 174 409 10 HOH HOH A . C 3 HOH 175 410 58 HOH HOH A . C 3 HOH 176 411 1 HOH HOH A . C 3 HOH 177 412 56 HOH HOH A . C 3 HOH 178 413 1 HOH HOH A . C 3 HOH 179 414 2 HOH HOH A . C 3 HOH 180 415 3 HOH HOH A . C 3 HOH 181 416 4 HOH HOH A . C 3 HOH 182 417 5 HOH HOH A . C 3 HOH 183 418 6 HOH HOH A . C 3 HOH 184 419 7 HOH HOH A . C 3 HOH 185 420 8 HOH HOH A . C 3 HOH 186 421 10 HOH HOH A . C 3 HOH 187 422 12 HOH HOH A . C 3 HOH 188 423 13 HOH HOH A . C 3 HOH 189 424 15 HOH HOH A . C 3 HOH 190 425 17 HOH HOH A . C 3 HOH 191 426 18 HOH HOH A . C 3 HOH 192 427 23 HOH HOH A . C 3 HOH 193 428 24 HOH HOH A . C 3 HOH 194 429 25 HOH HOH A . C 3 HOH 195 430 26 HOH HOH A . C 3 HOH 196 431 27 HOH HOH A . C 3 HOH 197 432 28 HOH HOH A . C 3 HOH 198 433 29 HOH HOH A . C 3 HOH 199 434 30 HOH HOH A . C 3 HOH 200 435 34 HOH HOH A . C 3 HOH 201 436 40 HOH HOH A . C 3 HOH 202 437 56 HOH HOH A . C 3 HOH 203 438 115 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 27 A MSE 24 ? MET SELENOMETHIONINE 2 A MSE 29 A MSE 26 ? MET SELENOMETHIONINE 3 A MSE 43 A MSE 40 ? MET SELENOMETHIONINE 4 A MSE 107 A MSE 104 ? MET SELENOMETHIONINE 5 A MSE 201 A MSE 198 ? MET SELENOMETHIONINE 6 A MSE 203 A MSE 200 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 373 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id NE2 _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id A _pdbx_struct_conn_angle.ptnr1_label_comp_id HIS _pdbx_struct_conn_angle.ptnr1_label_seq_id 128 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id A _pdbx_struct_conn_angle.ptnr1_auth_comp_id HIS _pdbx_struct_conn_angle.ptnr1_auth_seq_id 125 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id MG _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id B _pdbx_struct_conn_angle.ptnr2_label_comp_id MG _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id A _pdbx_struct_conn_angle.ptnr2_auth_comp_id MG _pdbx_struct_conn_angle.ptnr2_auth_seq_id 235 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id OD1 _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id A _pdbx_struct_conn_angle.ptnr3_label_comp_id ASP _pdbx_struct_conn_angle.ptnr3_label_seq_id 131 _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id A _pdbx_struct_conn_angle.ptnr3_auth_comp_id ASP _pdbx_struct_conn_angle.ptnr3_auth_seq_id 128 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 105.7 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-02-05 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 12.3809 _pdbx_refine_tls.origin_y 18.4107 _pdbx_refine_tls.origin_z 9.9460 _pdbx_refine_tls.T[1][1] -0.0660 _pdbx_refine_tls.T[2][2] -0.0817 _pdbx_refine_tls.T[3][3] -0.1090 _pdbx_refine_tls.T[1][2] 0.0214 _pdbx_refine_tls.T[1][3] 0.0207 _pdbx_refine_tls.T[2][3] 0.0107 _pdbx_refine_tls.L[1][1] 2.7984 _pdbx_refine_tls.L[2][2] 1.6796 _pdbx_refine_tls.L[3][3] 0.5194 _pdbx_refine_tls.L[1][2] 0.3608 _pdbx_refine_tls.L[1][3] -0.0915 _pdbx_refine_tls.L[2][3] -0.1237 _pdbx_refine_tls.S[1][1] -0.0438 _pdbx_refine_tls.S[1][2] 0.0372 _pdbx_refine_tls.S[1][3] 0.0547 _pdbx_refine_tls.S[2][1] -0.0473 _pdbx_refine_tls.S[2][2] 0.0365 _pdbx_refine_tls.S[2][3] 0.0776 _pdbx_refine_tls.S[3][1] -0.0033 _pdbx_refine_tls.S[3][2] 0.0060 _pdbx_refine_tls.S[3][3] 0.0073 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A -1 A 2 A 50 A 53 ? 'X-RAY DIFFRACTION' ? 2 1 A 51 A 54 A 100 A 103 ? 'X-RAY DIFFRACTION' ? 3 1 A 101 A 104 A 150 A 153 ? 'X-RAY DIFFRACTION' ? 4 1 A 151 A 154 A 200 A 203 ? 'X-RAY DIFFRACTION' ? 5 1 A 201 A 204 A 234 A 237 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 HKL-3000 'data collection' . ? 2 HKL-3000 'data reduction' . ? 3 HKL-3000 'data scaling' . ? 4 MLPHARE phasing . ? 5 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 ALA _pdbx_validate_rmsd_bond.auth_seq_id_1 31 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 N _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 GLN _pdbx_validate_rmsd_bond.auth_seq_id_2 32 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.514 _pdbx_validate_rmsd_bond.bond_target_value 1.336 _pdbx_validate_rmsd_bond.bond_deviation 0.178 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.023 _pdbx_validate_rmsd_bond.linker_flag Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 O A ALA 31 ? ? C A ALA 31 ? ? N A GLN 32 ? ? 110.55 122.70 -12.15 1.60 Y 2 1 NE A ARG 93 ? ? CZ A ARG 93 ? ? NH2 A ARG 93 ? ? 117.01 120.30 -3.29 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 31 ? ? -149.77 -155.91 2 1 MSE A 104 ? A 34.14 60.24 3 1 ASP A 190 ? ? 57.65 10.63 4 1 LYS A 191 ? ? -131.40 -54.70 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 THR _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 205 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 GLY _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 206 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -47.79 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -2 ? A SER 1 2 1 Y 1 A GLY 33 ? A GLY 36 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 water HOH #