HEADER TRANSFERASE 14-DEC-07 3BNW TITLE CRYSTAL STRUCTURE OF RIBOFLAVIN KINASE FROM TRYPANOSOMA BRUCEI COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBOFLAVIN KINASE, PUTATIVE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.7.1.26; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA BRUCEI; SOURCE 3 ORGANISM_TAXID: 5691; SOURCE 4 STRAIN: 927/4 GUTAT10.1; SOURCE 5 GENE: TB09.211.3420; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS APO STRUCTURE, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS OF PATHOGENIC KEYWDS 2 PROTOZOA CONSORTIUM, SGPP, KINASE, TRANSFERASE, PSI-2, PROTEIN KEYWDS 3 STRUCTURE INITIATIVE EXPDTA X-RAY DIFFRACTION AUTHOR E.A.MERRITT,M.HOLMES,STRUCTURAL GENOMICS OF PATHOGENIC PROTOZOA AUTHOR 2 CONSORTIUM (SGPP) REVDAT 5 03-APR-24 3BNW 1 REMARK REVDAT 4 21-FEB-24 3BNW 1 SEQADV REVDAT 3 13-JUL-11 3BNW 1 VERSN REVDAT 2 24-FEB-09 3BNW 1 VERSN REVDAT 1 08-JAN-08 3BNW 0 JRNL AUTH E.A.MERRITT,M.HOLMES JRNL TITL RIBOFLAVIN KINASE FROM TRYPANOSOMA BRUCEI. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 86.7 REMARK 3 NUMBER OF REFLECTIONS : 10179 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.289 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 510 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 400 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 47.15 REMARK 3 BIN R VALUE (WORKING SET) : 0.3550 REMARK 3 BIN FREE R VALUE SET COUNT : 22 REMARK 3 BIN FREE R VALUE : 0.5890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2494 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 45 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 52.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.47000 REMARK 3 B22 (A**2) : 1.11000 REMARK 3 B33 (A**2) : -0.63000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 6.294 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.369 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.326 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 29.819 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.890 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2568 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1738 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3482 ; 0.961 ; 1.952 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4230 ; 0.765 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 311 ; 5.622 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 115 ;32.070 ;24.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 398 ;13.978 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;13.420 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 373 ; 0.055 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2841 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 547 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 473 ; 0.172 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1713 ; 0.172 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1236 ; 0.181 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1304 ; 0.082 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 65 ; 0.136 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 16 ; 0.107 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 28 ; 0.166 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.162 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1681 ; 0.422 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 636 ; 0.056 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2539 ; 0.719 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1101 ; 0.713 ; 4.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 943 ; 1.017 ; 6.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 171 REMARK 3 ORIGIN FOR THE GROUP (A): 7.3970 48.1060 29.1290 REMARK 3 T TENSOR REMARK 3 T11: 0.0850 T22: 0.6466 REMARK 3 T33: 0.0451 T12: 0.0290 REMARK 3 T13: 0.0476 T23: -0.0102 REMARK 3 L TENSOR REMARK 3 L11: 5.2603 L22: 1.7594 REMARK 3 L33: 4.5445 L12: -0.6000 REMARK 3 L13: -1.4163 L23: -0.4817 REMARK 3 S TENSOR REMARK 3 S11: 0.1701 S12: 0.7067 S13: 0.0249 REMARK 3 S21: -0.1185 S22: -0.0869 S23: -0.1091 REMARK 3 S31: -0.0681 S32: -0.1477 S33: -0.0831 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 5 B 171 REMARK 3 ORIGIN FOR THE GROUP (A): -9.8610 44.9860 54.3130 REMARK 3 T TENSOR REMARK 3 T11: 0.0542 T22: 0.6159 REMARK 3 T33: 0.0650 T12: 0.0462 REMARK 3 T13: 0.0662 T23: 0.0479 REMARK 3 L TENSOR REMARK 3 L11: 3.4237 L22: 1.7765 REMARK 3 L33: 7.7603 L12: 0.3147 REMARK 3 L13: 0.7847 L23: 0.4165 REMARK 3 S TENSOR REMARK 3 S11: 0.1248 S12: -0.4041 S13: -0.0869 REMARK 3 S21: 0.0906 S22: 0.0255 S23: 0.1407 REMARK 3 S31: -0.0239 S32: -0.8134 S33: -0.1502 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. FROM TLS REFINEMENT, ATOM RECORD CONTAINS RESIDUAL B REMARK 3 FACTORS ONLY REMARK 4 REMARK 4 3BNW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-DEC-07. REMARK 100 THE DEPOSITION ID IS D_1000045748. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUN-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10719 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 38.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.0 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: HYBRID MODEL GENERATED BY ROSETTA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.28M KF, 0.1M HEPES, REMARK 280 5MM DTT, PH 7.6, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.80200 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 39.69500 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 GLY A 19 REMARK 465 LYS A 20 REMARK 465 GLY A 21 REMARK 465 ARG A 22 REMARK 465 GLY A 23 REMARK 465 GLY A 24 REMARK 465 MET A 82 REMARK 465 GLN A 83 REMARK 465 PHE A 84 REMARK 465 ASP A 85 REMARK 465 GLU A 86 REMARK 465 LYS A 87 REMARK 465 ASP A 172 REMARK 465 GLU A 173 REMARK 465 MET B -7 REMARK 465 ALA B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 ARG B 2 REMARK 465 GLN B 3 REMARK 465 THR B 4 REMARK 465 LYS B 20 REMARK 465 GLY B 21 REMARK 465 ARG B 22 REMARK 465 GLY B 23 REMARK 465 GLY B 24 REMARK 465 ASN B 81 REMARK 465 MET B 82 REMARK 465 GLN B 83 REMARK 465 PHE B 84 REMARK 465 ASP B 85 REMARK 465 ASP B 172 REMARK 465 GLU B 173 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 2 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 65 CG CD OE1 OE2 REMARK 470 ARG A 66 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 80 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASN A 81 CG OD1 ND2 REMARK 470 THR A 88 OG1 CG2 REMARK 470 GLU B 65 CG CD OE1 OE2 REMARK 470 ARG B 66 CG CD NE CZ NH1 NH2 REMARK 470 PHE B 80 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 87 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 64 42.93 -108.86 REMARK 500 HIS A 123 -64.89 -102.23 REMARK 500 SER A 161 124.74 174.52 REMARK 500 GLN B 60 57.46 35.46 REMARK 500 LYS B 87 33.54 -96.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: TBRU019101AAA RELATED DB: TARGETDB DBREF 3BNW A 1 173 UNP Q38DG4 Q38DG4_9TRYP 1 173 DBREF 3BNW B 1 173 UNP Q38DG4 Q38DG4_9TRYP 1 173 SEQADV 3BNW MET A -7 UNP Q38DG4 EXPRESSION TAG SEQADV 3BNW ALA A -6 UNP Q38DG4 EXPRESSION TAG SEQADV 3BNW HIS A -5 UNP Q38DG4 EXPRESSION TAG SEQADV 3BNW HIS A -4 UNP Q38DG4 EXPRESSION TAG SEQADV 3BNW HIS A -3 UNP Q38DG4 EXPRESSION TAG SEQADV 3BNW HIS A -2 UNP Q38DG4 EXPRESSION TAG SEQADV 3BNW HIS A -1 UNP Q38DG4 EXPRESSION TAG SEQADV 3BNW HIS A 0 UNP Q38DG4 EXPRESSION TAG SEQADV 3BNW MET B -7 UNP Q38DG4 EXPRESSION TAG SEQADV 3BNW ALA B -6 UNP Q38DG4 EXPRESSION TAG SEQADV 3BNW HIS B -5 UNP Q38DG4 EXPRESSION TAG SEQADV 3BNW HIS B -4 UNP Q38DG4 EXPRESSION TAG SEQADV 3BNW HIS B -3 UNP Q38DG4 EXPRESSION TAG SEQADV 3BNW HIS B -2 UNP Q38DG4 EXPRESSION TAG SEQADV 3BNW HIS B -1 UNP Q38DG4 EXPRESSION TAG SEQADV 3BNW HIS B 0 UNP Q38DG4 EXPRESSION TAG SEQRES 1 A 181 MET ALA HIS HIS HIS HIS HIS HIS MET ARG GLN THR GLY SEQRES 2 A 181 SER PHE GLN PRO PHE PHE LEU ARG GLY LYS VAL VAL HIS SEQRES 3 A 181 GLY LYS GLY ARG GLY GLY SER GLN LEU GLY PHE PRO THR SEQRES 4 A 181 ALA ASN ILE GLY LEU ASP LYS ASP VAL MET GLU CYS LEU SEQRES 5 A 181 GLN PRO TYR LYS ASN LEU VAL VAL TYR GLY TRP GLY THR SEQRES 6 A 181 VAL SER GLN VAL PRO GLY LYS GLU ARG GLU SER PHE GLY SEQRES 7 A 181 PRO TYR PRO PHE ALA ALA SER ILE GLY PHE ASN MET GLN SEQRES 8 A 181 PHE ASP GLU LYS THR LEU THR VAL GLU PRO TYR PHE LEU SEQRES 9 A 181 HIS GLU PHE GLY TRP ASP PHE TYR GLY ALA VAL VAL LYS SEQRES 10 A 181 ILE ILE VAL LEU GLY GLU ILE ARG SER MET GLY SER PHE SEQRES 11 A 181 HIS SER LEU GLN ALA LEU VAL ASP THR ILE LYS SER ASP SEQRES 12 A 181 VAL GLN PHE THR ARG ASP MET LEU GLN LYS PRO GLN LEU SEQRES 13 A 181 GLN GLU PHE SER ARG HIS SER LEU PHE GLU SER PRO SER SEQRES 14 A 181 SER THR ILE PRO TYR PHE GLU ASP LEU PRO ASP GLU SEQRES 1 B 181 MET ALA HIS HIS HIS HIS HIS HIS MET ARG GLN THR GLY SEQRES 2 B 181 SER PHE GLN PRO PHE PHE LEU ARG GLY LYS VAL VAL HIS SEQRES 3 B 181 GLY LYS GLY ARG GLY GLY SER GLN LEU GLY PHE PRO THR SEQRES 4 B 181 ALA ASN ILE GLY LEU ASP LYS ASP VAL MET GLU CYS LEU SEQRES 5 B 181 GLN PRO TYR LYS ASN LEU VAL VAL TYR GLY TRP GLY THR SEQRES 6 B 181 VAL SER GLN VAL PRO GLY LYS GLU ARG GLU SER PHE GLY SEQRES 7 B 181 PRO TYR PRO PHE ALA ALA SER ILE GLY PHE ASN MET GLN SEQRES 8 B 181 PHE ASP GLU LYS THR LEU THR VAL GLU PRO TYR PHE LEU SEQRES 9 B 181 HIS GLU PHE GLY TRP ASP PHE TYR GLY ALA VAL VAL LYS SEQRES 10 B 181 ILE ILE VAL LEU GLY GLU ILE ARG SER MET GLY SER PHE SEQRES 11 B 181 HIS SER LEU GLN ALA LEU VAL ASP THR ILE LYS SER ASP SEQRES 12 B 181 VAL GLN PHE THR ARG ASP MET LEU GLN LYS PRO GLN LEU SEQRES 13 B 181 GLN GLU PHE SER ARG HIS SER LEU PHE GLU SER PRO SER SEQRES 14 B 181 SER THR ILE PRO TYR PHE GLU ASP LEU PRO ASP GLU FORMUL 3 HOH *45(H2 O) HELIX 1 1 ASP A 37 GLN A 45 1 9 HELIX 2 2 PRO A 46 LYS A 48 5 3 HELIX 3 3 SER A 124 GLN A 144 1 21 HELIX 4 4 LYS A 145 GLU A 150 1 6 HELIX 5 5 PHE A 151 HIS A 154 5 4 HELIX 6 6 ASP B 37 LEU B 44 1 8 HELIX 7 7 GLN B 45 LYS B 48 5 4 HELIX 8 8 SER B 124 LYS B 145 1 22 HELIX 9 9 LYS B 145 GLU B 150 1 6 HELIX 10 10 PHE B 151 GLU B 158 5 8 SHEET 1 A 6 ASN A 33 ILE A 34 0 SHEET 2 A 6 PHE A 10 VAL A 17 -1 N VAL A 17 O ASN A 33 SHEET 3 A 6 VAL A 107 SER A 118 -1 O VAL A 108 N GLY A 14 SHEET 4 A 6 LEU A 50 VAL A 61 -1 N VAL A 51 O ILE A 116 SHEET 5 A 6 LYS A 64 GLY A 79 -1 O PHE A 69 N VAL A 58 SHEET 6 A 6 THR A 90 PHE A 95 -1 O TYR A 94 N ALA A 75 SHEET 1 B 3 ASN A 33 ILE A 34 0 SHEET 2 B 3 PHE A 10 VAL A 17 -1 N VAL A 17 O ASN A 33 SHEET 3 B 3 TYR A 166 ASP A 169 -1 O GLU A 168 N PHE A 11 SHEET 1 C 6 ASN B 33 ILE B 34 0 SHEET 2 C 6 PHE B 10 VAL B 17 -1 N VAL B 17 O ASN B 33 SHEET 3 C 6 VAL B 107 SER B 118 -1 O ILE B 110 N LEU B 12 SHEET 4 C 6 LEU B 50 VAL B 61 -1 N VAL B 51 O ILE B 116 SHEET 5 C 6 LYS B 64 GLY B 79 -1 O PHE B 69 N VAL B 58 SHEET 6 C 6 THR B 90 PHE B 95 -1 O THR B 90 N GLY B 79 SHEET 1 D 3 ASN B 33 ILE B 34 0 SHEET 2 D 3 PHE B 10 VAL B 17 -1 N VAL B 17 O ASN B 33 SHEET 3 D 3 TYR B 166 ASP B 169 -1 O GLU B 168 N PHE B 11 CISPEP 1 GLY A 70 PRO A 71 0 1.43 CISPEP 2 ILE A 164 PRO A 165 0 -6.28 CISPEP 3 PHE B 29 PRO B 30 0 -15.67 CISPEP 4 GLY B 70 PRO B 71 0 -0.72 CISPEP 5 ILE B 164 PRO B 165 0 -6.86 CRYST1 39.695 65.604 62.690 90.00 103.49 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025192 0.000000 0.006044 0.00000 SCALE2 0.000000 0.015243 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016404 0.00000