data_3BO0 # _entry.id 3BO0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3BO0 pdb_00003bo0 10.2210/pdb3bo0/pdb RCSB RCSB045752 ? ? WWPDB D_1000045752 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-12-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' em_3d_fitting_list 5 3 'Structure model' em_image_scans 6 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_em_3d_fitting_list.accession_code' 4 3 'Structure model' '_em_3d_fitting_list.initial_refinement_model_id' 5 3 'Structure model' '_em_3d_fitting_list.source_name' 6 3 'Structure model' '_em_3d_fitting_list.type' # _database_PDB_caveat.id 1 _database_PDB_caveat.text 'Chirality error at GLN241, GLN250, and ALA373 in chain A.' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3BO0 _pdbx_database_status.recvd_initial_deposition_date 2007-12-15 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3BO1 . unspecified EMDB EMD-1484 . 'associated EM volume' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Akey, C.W.' 1 'Menetret, J.F.' 2 # _citation.id primary _citation.title 'Ribosome binding of a single copy of the SecY complex: implications for protein translocation' _citation.journal_abbrev Mol.Cell _citation.journal_volume 28 _citation.page_first 1083 _citation.page_last 1092 _citation.year 2007 _citation.journal_id_ASTM MOCEFL _citation.country US _citation.journal_id_ISSN 1097-2765 _citation.journal_id_CSD 2168 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18158904 _citation.pdbx_database_id_DOI 10.1016/j.molcel.2007.10.034 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Menetret, J.F.' 1 ? primary 'Schaletzky, J.' 2 ? primary 'Clemons, W.M.' 3 ? primary 'Osborne, A.R.' 4 ? primary 'Skanland, S.S.' 5 ? primary 'Denison, C.' 6 ? primary 'Gygi, S.P.' 7 ? primary 'Kirkpatrick, D.S.' 8 ? primary 'Park, E.' 9 ? primary 'Ludtke, S.J.' 10 ? primary 'Rapoport, T.A.' 11 ? primary 'Akey, C.W.' 12 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat '23S RIBOSOMAL RNA' 8698.224 1 ? ? 'GB residues 79-105' 'helix 7' 2 polymer nat '23S RIBOSOMAL RNA' 8860.439 1 ? ? 'GB residues 478-504' 'helix 24' 3 polymer nat '23S RIBOSOMAL RNA' 6024.601 1 ? ? 'GB residues 1385-1403' 'helix 47' 4 polymer nat '23S RIBOSOMAL RNA' 10382.260 1 ? ? 'GB residues 1518-1549' 'helix 59' 5 polymer man 'PREPROTEIN TRANSLOCASE SecY SUBUNIT' 48367.695 1 ? ? ? ? 6 polymer man 'PREPROTEIN TRANSLOCASE SecE SUBUNIT' 7149.573 1 ? ? ? ? 7 polymer man 'Preprotein translocase secG subunit' 3639.310 1 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 6 'PROTEIN TRANSPORT PROTEIN SEC61 GAMMA SUBUNIT' 7 'Protein transport protein SEC61 subunit beta homolog' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no CGGUAAGGUGAUAUGAACCGUUAUAAC CGGUAAGGUGAUAUGAACCGUUAUAAC D ? 2 polyribonucleotide no no AAAGAACCCCGGCGAGGGGAGUGAAAA AAAGAACCCCGGCGAGGGGAGUGAAAA E ? 3 polyribonucleotide no no ACAGGUUAAUAUUCCUGUA ACAGGUUAAUAUUCCUGUA F ? 4 polyribonucleotide no no CGUGAUGACGAGGCACUACGGUGCUGAAGCAA CGUGAUGACGAGGCACUACGGUGCUGAAGCAA G ? 5 'polypeptide(L)' no no ;KKLIPILEKIPEVELPVKEITFKEKLKWTGIVLVLYFIMGCIDVYTAGAQIPAIFEFWQTITASRIGTLITLGIGPIVTA GIIMQLLVGSGIIQMDLSIPENRALFQGCQKLLSIIMCFVEAVLFVGAGAFGILTPLLAFLVIIQIAFGSIILIYLDEIV SKYGIGSGIGLFIAAGVSQTIFVGALGPEGYLWKFLNSLIQGVPNIEYIAPIIGTIIVFLMVVYAECMRRRIVVNYAKRQ QGRRVYAAQSTHLPLKVVYVSNIPVILAAALFANIQLWGLALYRMGIPILGHYEGGRAVDGIAYYLSTPYGLSSVISDPI HAIVYMIAMIITCVMFGIFWVETTGLDPKSMAKRIKKSGAFVPGIRPGEQTAKYIEHRLKRYIPPLTVMSSAFVGFLATI ANFIGALGGGTGVLLTVSIVYRMYEQLLREKVSELHPAIAKL ; ;KKLIPILEKIPEVELPVKEITFKEKLKWTGIVLVLYFIMGCIDVYTAGAQIPAIFEFWQTITASRIGTLITLGIGPIVTA GIIMQLLVGSGIIQMDLSIPENRALFQGCQKLLSIIMCFVEAVLFVGAGAFGILTPLLAFLVIIQIAFGSIILIYLDEIV SKYGIGSGIGLFIAAGVSQTIFVGALGPEGYLWKFLNSLIQGVPNIEYIAPIIGTIIVFLMVVYAECMRRRIVVNYAKRQ QGRRVYAAQSTHLPLKVVYVSNIPVILAAALFANIQLWGLALYRMGIPILGHYEGGRAVDGIAYYLSTPYGLSSVISDPI HAIVYMIAMIITCVMFGIFWVETTGLDPKSMAKRIKKSGAFVPGIRPGEQTAKYIEHRLKRYIPPLTVMSSAFVGFLATI ANFIGALGGGTGVLLTVSIVYRMYEQLLREKVSELHPAIAKL ; A ? 6 'polypeptide(L)' no no TKGKATVAFAREARTEVRKVIWPTRKPTKDEYLAVAKVTALGISLLGIIGYIIHVPATYIKGILK TKGKATVAFAREARTEVRKVIWPTRKPTKDEYLAVAKVTALGISLLGIIGYIIHVPATYIKGILK B ? 7 'polypeptide(L)' no no ETFSKIRVKPEHVIGVTVAFVIIEAILTYGRF ETFSKIRVKPEHVIGVTVAFVIIEAILTYGRF C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 C n 1 2 G n 1 3 G n 1 4 U n 1 5 A n 1 6 A n 1 7 G n 1 8 G n 1 9 U n 1 10 G n 1 11 A n 1 12 U n 1 13 A n 1 14 U n 1 15 G n 1 16 A n 1 17 A n 1 18 C n 1 19 C n 1 20 G n 1 21 U n 1 22 U n 1 23 A n 1 24 U n 1 25 A n 1 26 A n 1 27 C n 2 1 A n 2 2 A n 2 3 A n 2 4 G n 2 5 A n 2 6 A n 2 7 C n 2 8 C n 2 9 C n 2 10 C n 2 11 G n 2 12 G n 2 13 C n 2 14 G n 2 15 A n 2 16 G n 2 17 G n 2 18 G n 2 19 G n 2 20 A n 2 21 G n 2 22 U n 2 23 G n 2 24 A n 2 25 A n 2 26 A n 2 27 A n 3 1 A n 3 2 C n 3 3 A n 3 4 G n 3 5 G n 3 6 U n 3 7 U n 3 8 A n 3 9 A n 3 10 U n 3 11 A n 3 12 U n 3 13 U n 3 14 C n 3 15 C n 3 16 U n 3 17 G n 3 18 U n 3 19 A n 4 1 C n 4 2 G n 4 3 U n 4 4 G n 4 5 A n 4 6 U n 4 7 G n 4 8 A n 4 9 C n 4 10 G n 4 11 A n 4 12 G n 4 13 G n 4 14 C n 4 15 A n 4 16 C n 4 17 U n 4 18 A n 4 19 C n 4 20 G n 4 21 G n 4 22 U n 4 23 G n 4 24 C n 4 25 U n 4 26 G n 4 27 A n 4 28 A n 4 29 G n 4 30 C n 4 31 A n 4 32 A n 5 1 LYS n 5 2 LYS n 5 3 LEU n 5 4 ILE n 5 5 PRO n 5 6 ILE n 5 7 LEU n 5 8 GLU n 5 9 LYS n 5 10 ILE n 5 11 PRO n 5 12 GLU n 5 13 VAL n 5 14 GLU n 5 15 LEU n 5 16 PRO n 5 17 VAL n 5 18 LYS n 5 19 GLU n 5 20 ILE n 5 21 THR n 5 22 PHE n 5 23 LYS n 5 24 GLU n 5 25 LYS n 5 26 LEU n 5 27 LYS n 5 28 TRP n 5 29 THR n 5 30 GLY n 5 31 ILE n 5 32 VAL n 5 33 LEU n 5 34 VAL n 5 35 LEU n 5 36 TYR n 5 37 PHE n 5 38 ILE n 5 39 MET n 5 40 GLY n 5 41 CYS n 5 42 ILE n 5 43 ASP n 5 44 VAL n 5 45 TYR n 5 46 THR n 5 47 ALA n 5 48 GLY n 5 49 ALA n 5 50 GLN n 5 51 ILE n 5 52 PRO n 5 53 ALA n 5 54 ILE n 5 55 PHE n 5 56 GLU n 5 57 PHE n 5 58 TRP n 5 59 GLN n 5 60 THR n 5 61 ILE n 5 62 THR n 5 63 ALA n 5 64 SER n 5 65 ARG n 5 66 ILE n 5 67 GLY n 5 68 THR n 5 69 LEU n 5 70 ILE n 5 71 THR n 5 72 LEU n 5 73 GLY n 5 74 ILE n 5 75 GLY n 5 76 PRO n 5 77 ILE n 5 78 VAL n 5 79 THR n 5 80 ALA n 5 81 GLY n 5 82 ILE n 5 83 ILE n 5 84 MET n 5 85 GLN n 5 86 LEU n 5 87 LEU n 5 88 VAL n 5 89 GLY n 5 90 SER n 5 91 GLY n 5 92 ILE n 5 93 ILE n 5 94 GLN n 5 95 MET n 5 96 ASP n 5 97 LEU n 5 98 SER n 5 99 ILE n 5 100 PRO n 5 101 GLU n 5 102 ASN n 5 103 ARG n 5 104 ALA n 5 105 LEU n 5 106 PHE n 5 107 GLN n 5 108 GLY n 5 109 CYS n 5 110 GLN n 5 111 LYS n 5 112 LEU n 5 113 LEU n 5 114 SER n 5 115 ILE n 5 116 ILE n 5 117 MET n 5 118 CYS n 5 119 PHE n 5 120 VAL n 5 121 GLU n 5 122 ALA n 5 123 VAL n 5 124 LEU n 5 125 PHE n 5 126 VAL n 5 127 GLY n 5 128 ALA n 5 129 GLY n 5 130 ALA n 5 131 PHE n 5 132 GLY n 5 133 ILE n 5 134 LEU n 5 135 THR n 5 136 PRO n 5 137 LEU n 5 138 LEU n 5 139 ALA n 5 140 PHE n 5 141 LEU n 5 142 VAL n 5 143 ILE n 5 144 ILE n 5 145 GLN n 5 146 ILE n 5 147 ALA n 5 148 PHE n 5 149 GLY n 5 150 SER n 5 151 ILE n 5 152 ILE n 5 153 LEU n 5 154 ILE n 5 155 TYR n 5 156 LEU n 5 157 ASP n 5 158 GLU n 5 159 ILE n 5 160 VAL n 5 161 SER n 5 162 LYS n 5 163 TYR n 5 164 GLY n 5 165 ILE n 5 166 GLY n 5 167 SER n 5 168 GLY n 5 169 ILE n 5 170 GLY n 5 171 LEU n 5 172 PHE n 5 173 ILE n 5 174 ALA n 5 175 ALA n 5 176 GLY n 5 177 VAL n 5 178 SER n 5 179 GLN n 5 180 THR n 5 181 ILE n 5 182 PHE n 5 183 VAL n 5 184 GLY n 5 185 ALA n 5 186 LEU n 5 187 GLY n 5 188 PRO n 5 189 GLU n 5 190 GLY n 5 191 TYR n 5 192 LEU n 5 193 TRP n 5 194 LYS n 5 195 PHE n 5 196 LEU n 5 197 ASN n 5 198 SER n 5 199 LEU n 5 200 ILE n 5 201 GLN n 5 202 GLY n 5 203 VAL n 5 204 PRO n 5 205 ASN n 5 206 ILE n 5 207 GLU n 5 208 TYR n 5 209 ILE n 5 210 ALA n 5 211 PRO n 5 212 ILE n 5 213 ILE n 5 214 GLY n 5 215 THR n 5 216 ILE n 5 217 ILE n 5 218 VAL n 5 219 PHE n 5 220 LEU n 5 221 MET n 5 222 VAL n 5 223 VAL n 5 224 TYR n 5 225 ALA n 5 226 GLU n 5 227 CYS n 5 228 MET n 5 229 ARG n 5 230 ARG n 5 231 ARG n 5 232 ILE n 5 233 VAL n 5 234 VAL n 5 235 ASN n 5 236 TYR n 5 237 ALA n 5 238 LYS n 5 239 ARG n 5 240 GLN n 5 241 GLN n 5 242 GLY n 5 243 ARG n 5 244 ARG n 5 245 VAL n 5 246 TYR n 5 247 ALA n 5 248 ALA n 5 249 GLN n 5 250 SER n 5 251 THR n 5 252 HIS n 5 253 LEU n 5 254 PRO n 5 255 LEU n 5 256 LYS n 5 257 VAL n 5 258 VAL n 5 259 TYR n 5 260 VAL n 5 261 SER n 5 262 ASN n 5 263 ILE n 5 264 PRO n 5 265 VAL n 5 266 ILE n 5 267 LEU n 5 268 ALA n 5 269 ALA n 5 270 ALA n 5 271 LEU n 5 272 PHE n 5 273 ALA n 5 274 ASN n 5 275 ILE n 5 276 GLN n 5 277 LEU n 5 278 TRP n 5 279 GLY n 5 280 LEU n 5 281 ALA n 5 282 LEU n 5 283 TYR n 5 284 ARG n 5 285 MET n 5 286 GLY n 5 287 ILE n 5 288 PRO n 5 289 ILE n 5 290 LEU n 5 291 GLY n 5 292 HIS n 5 293 TYR n 5 294 GLU n 5 295 GLY n 5 296 GLY n 5 297 ARG n 5 298 ALA n 5 299 VAL n 5 300 ASP n 5 301 GLY n 5 302 ILE n 5 303 ALA n 5 304 TYR n 5 305 TYR n 5 306 LEU n 5 307 SER n 5 308 THR n 5 309 PRO n 5 310 TYR n 5 311 GLY n 5 312 LEU n 5 313 SER n 5 314 SER n 5 315 VAL n 5 316 ILE n 5 317 SER n 5 318 ASP n 5 319 PRO n 5 320 ILE n 5 321 HIS n 5 322 ALA n 5 323 ILE n 5 324 VAL n 5 325 TYR n 5 326 MET n 5 327 ILE n 5 328 ALA n 5 329 MET n 5 330 ILE n 5 331 ILE n 5 332 THR n 5 333 CYS n 5 334 VAL n 5 335 MET n 5 336 PHE n 5 337 GLY n 5 338 ILE n 5 339 PHE n 5 340 TRP n 5 341 VAL n 5 342 GLU n 5 343 THR n 5 344 THR n 5 345 GLY n 5 346 LEU n 5 347 ASP n 5 348 PRO n 5 349 LYS n 5 350 SER n 5 351 MET n 5 352 ALA n 5 353 LYS n 5 354 ARG n 5 355 ILE n 5 356 LYS n 5 357 LYS n 5 358 SER n 5 359 GLY n 5 360 ALA n 5 361 PHE n 5 362 VAL n 5 363 PRO n 5 364 GLY n 5 365 ILE n 5 366 ARG n 5 367 PRO n 5 368 GLY n 5 369 GLU n 5 370 GLN n 5 371 THR n 5 372 ALA n 5 373 LYS n 5 374 TYR n 5 375 ILE n 5 376 GLU n 5 377 HIS n 5 378 ARG n 5 379 LEU n 5 380 LYS n 5 381 ARG n 5 382 TYR n 5 383 ILE n 5 384 PRO n 5 385 PRO n 5 386 LEU n 5 387 THR n 5 388 VAL n 5 389 MET n 5 390 SER n 5 391 SER n 5 392 ALA n 5 393 PHE n 5 394 VAL n 5 395 GLY n 5 396 PHE n 5 397 LEU n 5 398 ALA n 5 399 THR n 5 400 ILE n 5 401 ALA n 5 402 ASN n 5 403 PHE n 5 404 ILE n 5 405 GLY n 5 406 ALA n 5 407 LEU n 5 408 GLY n 5 409 GLY n 5 410 GLY n 5 411 THR n 5 412 GLY n 5 413 VAL n 5 414 LEU n 5 415 LEU n 5 416 THR n 5 417 VAL n 5 418 SER n 5 419 ILE n 5 420 VAL n 5 421 TYR n 5 422 ARG n 5 423 MET n 5 424 TYR n 5 425 GLU n 5 426 GLN n 5 427 LEU n 5 428 LEU n 5 429 ARG n 5 430 GLU n 5 431 LYS n 5 432 VAL n 5 433 SER n 5 434 GLU n 5 435 LEU n 5 436 HIS n 5 437 PRO n 5 438 ALA n 5 439 ILE n 5 440 ALA n 5 441 LYS n 5 442 LEU n 6 1 THR n 6 2 LYS n 6 3 GLY n 6 4 LYS n 6 5 ALA n 6 6 THR n 6 7 VAL n 6 8 ALA n 6 9 PHE n 6 10 ALA n 6 11 ARG n 6 12 GLU n 6 13 ALA n 6 14 ARG n 6 15 THR n 6 16 GLU n 6 17 VAL n 6 18 ARG n 6 19 LYS n 6 20 VAL n 6 21 ILE n 6 22 TRP n 6 23 PRO n 6 24 THR n 6 25 ARG n 6 26 LYS n 6 27 PRO n 6 28 THR n 6 29 LYS n 6 30 ASP n 6 31 GLU n 6 32 TYR n 6 33 LEU n 6 34 ALA n 6 35 VAL n 6 36 ALA n 6 37 LYS n 6 38 VAL n 6 39 THR n 6 40 ALA n 6 41 LEU n 6 42 GLY n 6 43 ILE n 6 44 SER n 6 45 LEU n 6 46 LEU n 6 47 GLY n 6 48 ILE n 6 49 ILE n 6 50 GLY n 6 51 TYR n 6 52 ILE n 6 53 ILE n 6 54 HIS n 6 55 VAL n 6 56 PRO n 6 57 ALA n 6 58 THR n 6 59 TYR n 6 60 ILE n 6 61 LYS n 6 62 GLY n 6 63 ILE n 6 64 LEU n 6 65 LYS n 7 1 GLU n 7 2 THR n 7 3 PHE n 7 4 SER n 7 5 LYS n 7 6 ILE n 7 7 ARG n 7 8 VAL n 7 9 LYS n 7 10 PRO n 7 11 GLU n 7 12 HIS n 7 13 VAL n 7 14 ILE n 7 15 GLY n 7 16 VAL n 7 17 THR n 7 18 VAL n 7 19 ALA n 7 20 PHE n 7 21 VAL n 7 22 ILE n 7 23 ILE n 7 24 GLU n 7 25 ALA n 7 26 ILE n 7 27 LEU n 7 28 THR n 7 29 TYR n 7 30 GLY n 7 31 ARG n 7 32 PHE n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 5 1 sample ? ? ? ? ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 6 1 sample ? ? ? ? ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 7 1 sample ? ? ? ? ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 4 1 sample ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 C 1 79 79 C C D . n A 1 2 G 2 80 80 G G D . n A 1 3 G 3 81 81 G G D . n A 1 4 U 4 82 82 U U D . n A 1 5 A 5 83 83 A A D . n A 1 6 A 6 84 84 A A D . n A 1 7 G 7 85 85 G G D . n A 1 8 G 8 86 86 G G D . n A 1 9 U 9 87 87 U U D . n A 1 10 G 10 88 88 G G D . n A 1 11 A 11 89 89 A A D . n A 1 12 U 12 90 90 U U D . n A 1 13 A 13 91 91 A A D . n A 1 14 U 14 92 92 U U D . n A 1 15 G 15 93 93 G G D . n A 1 16 A 16 94 94 A A D . n A 1 17 A 17 95 95 A A D . n A 1 18 C 18 96 96 C C D . n A 1 19 C 19 97 97 C C D . n A 1 20 G 20 98 98 G G D . n A 1 21 U 21 99 99 U U D . n A 1 22 U 22 100 100 U U D . n A 1 23 A 23 101 101 A A D . n A 1 24 U 24 102 102 U U D . n A 1 25 A 25 103 103 A A D . n A 1 26 A 26 104 104 A A D . n A 1 27 C 27 105 105 C C D . n B 2 1 A 1 478 478 A A E . n B 2 2 A 2 479 479 A A E . n B 2 3 A 3 480 480 A A E . n B 2 4 G 4 481 481 G G E . n B 2 5 A 5 482 482 A A E . n B 2 6 A 6 483 483 A A E . n B 2 7 C 7 484 484 C C E . n B 2 8 C 8 485 485 C C E . n B 2 9 C 9 486 486 C C E . n B 2 10 C 10 487 487 C C E . n B 2 11 G 11 488 488 G G E . n B 2 12 G 12 489 489 G G E . n B 2 13 C 13 490 490 C C E . n B 2 14 G 14 491 491 G G E . n B 2 15 A 15 492 492 A A E . n B 2 16 G 16 493 493 G G E . n B 2 17 G 17 494 494 G G E . n B 2 18 G 18 495 495 G G E . n B 2 19 G 19 496 496 G G E . n B 2 20 A 20 497 497 A A E . n B 2 21 G 21 498 498 G G E . n B 2 22 U 22 499 499 U U E . n B 2 23 G 23 500 500 G G E . n B 2 24 A 24 501 501 A A E . n B 2 25 A 25 502 502 A A E . n B 2 26 A 26 503 503 A A E . n B 2 27 A 27 504 504 A A E . n C 3 1 A 1 1385 1385 A A F . n C 3 2 C 2 1386 1386 C C F . n C 3 3 A 3 1387 1387 A A F . n C 3 4 G 4 1388 1388 G G F . n C 3 5 G 5 1389 1389 G G F . n C 3 6 U 6 1390 1390 U U F . n C 3 7 U 7 1391 1391 U U F . n C 3 8 A 8 1392 1392 A A F . n C 3 9 A 9 1393 1393 A A F . n C 3 10 U 10 1394 1394 U U F . n C 3 11 A 11 1395 1395 A A F . n C 3 12 U 12 1396 1396 U U F . n C 3 13 U 13 1397 1397 U U F . n C 3 14 C 14 1398 1398 C C F . n C 3 15 C 15 1399 1399 C C F . n C 3 16 U 16 1400 1400 U U F . n C 3 17 G 17 1401 1401 G G F . n C 3 18 U 18 1402 1402 U U F . n C 3 19 A 19 1403 1403 A A F . n D 4 1 C 1 1518 1518 C C G . n D 4 2 G 2 1519 1519 G G G . n D 4 3 U 3 1520 1520 U U G . n D 4 4 G 4 1521 1521 G G G . n D 4 5 A 5 1522 1522 A A G . n D 4 6 U 6 1523 1523 U U G . n D 4 7 G 7 1524 1524 G G G . n D 4 8 A 8 1525 1525 A A G . n D 4 9 C 9 1526 1526 C C G . n D 4 10 G 10 1527 1527 G G G . n D 4 11 A 11 1528 1528 A A G . n D 4 12 G 12 1529 1529 G G G . n D 4 13 G 13 1530 1530 G G G . n D 4 14 C 14 1531 1531 C C G . n D 4 15 A 15 1532 1532 A A G . n D 4 16 C 16 1533 1533 C C G . n D 4 17 U 17 1534 1534 U U G . n D 4 18 A 18 1535 1535 A A G . n D 4 19 C 19 1536 1536 C C G . n D 4 20 G 20 1537 1537 G G G . n D 4 21 G 21 1538 1538 G G G . n D 4 22 U 22 1539 1539 U U G . n D 4 23 G 23 1540 1540 G G G . n D 4 24 C 24 1541 1541 C C G . n D 4 25 U 25 1542 1542 U U G . n D 4 26 G 26 1543 1543 G G G . n D 4 27 A 27 1544 1544 A A G . n D 4 28 A 28 1545 1545 A A G . n D 4 29 G 29 1546 1546 G G G . n D 4 30 C 30 1547 1547 C C G . n D 4 31 A 31 1548 1548 A A G . n D 4 32 A 32 1549 1549 A A G . n E 5 1 LYS 1 2 2 LYS LYS A . n E 5 2 LYS 2 3 3 LYS LYS A . n E 5 3 LEU 3 4 4 LEU LEU A . n E 5 4 ILE 4 5 5 ILE ILE A . n E 5 5 PRO 5 6 6 PRO PRO A . n E 5 6 ILE 6 7 7 ILE ILE A . n E 5 7 LEU 7 8 8 LEU LEU A . n E 5 8 GLU 8 9 9 GLU GLU A . n E 5 9 LYS 9 10 10 LYS LYS A . n E 5 10 ILE 10 11 11 ILE ILE A . n E 5 11 PRO 11 12 12 PRO PRO A . n E 5 12 GLU 12 13 13 GLU GLU A . n E 5 13 VAL 13 14 14 VAL VAL A . n E 5 14 GLU 14 15 15 GLU GLU A . n E 5 15 LEU 15 16 16 LEU LEU A . n E 5 16 PRO 16 17 17 PRO PRO A . n E 5 17 VAL 17 18 18 VAL VAL A . n E 5 18 LYS 18 19 19 LYS LYS A . n E 5 19 GLU 19 20 20 GLU GLU A . n E 5 20 ILE 20 21 21 ILE ILE A . n E 5 21 THR 21 22 22 THR THR A . n E 5 22 PHE 22 23 23 PHE PHE A . n E 5 23 LYS 23 24 24 LYS LYS A . n E 5 24 GLU 24 25 25 GLU GLU A . n E 5 25 LYS 25 26 26 LYS LYS A . n E 5 26 LEU 26 27 27 LEU LEU A . n E 5 27 LYS 27 28 28 LYS LYS A . n E 5 28 TRP 28 29 29 TRP TRP A . n E 5 29 THR 29 30 30 THR THR A . n E 5 30 GLY 30 31 31 GLY GLY A . n E 5 31 ILE 31 32 32 ILE ILE A . n E 5 32 VAL 32 33 33 VAL VAL A . n E 5 33 LEU 33 34 34 LEU LEU A . n E 5 34 VAL 34 35 35 VAL VAL A . n E 5 35 LEU 35 36 36 LEU LEU A . n E 5 36 TYR 36 37 37 TYR TYR A . n E 5 37 PHE 37 38 38 PHE PHE A . n E 5 38 ILE 38 39 39 ILE ILE A . n E 5 39 MET 39 40 40 MET MET A . n E 5 40 GLY 40 41 41 GLY GLY A . n E 5 41 CYS 41 42 42 CYS CYS A . n E 5 42 ILE 42 43 43 ILE ILE A . n E 5 43 ASP 43 44 44 ASP ASP A . n E 5 44 VAL 44 45 45 VAL VAL A . n E 5 45 TYR 45 46 46 TYR TYR A . n E 5 46 THR 46 47 47 THR THR A . n E 5 47 ALA 47 48 48 ALA ALA A . n E 5 48 GLY 48 49 49 GLY GLY A . n E 5 49 ALA 49 50 50 ALA ALA A . n E 5 50 GLN 50 51 51 GLN GLN A . n E 5 51 ILE 51 52 52 ILE ILE A . n E 5 52 PRO 52 53 53 PRO PRO A . n E 5 53 ALA 53 54 54 ALA ALA A . n E 5 54 ILE 54 55 55 ILE ILE A . n E 5 55 PHE 55 56 56 PHE PHE A . n E 5 56 GLU 56 57 57 GLU GLU A . n E 5 57 PHE 57 58 58 PHE PHE A . n E 5 58 TRP 58 59 59 TRP TRP A . n E 5 59 GLN 59 60 60 GLN GLN A . n E 5 60 THR 60 61 61 THR THR A . n E 5 61 ILE 61 62 62 ILE ILE A . n E 5 62 THR 62 63 63 THR THR A . n E 5 63 ALA 63 64 64 ALA ALA A . n E 5 64 SER 64 65 65 SER SER A . n E 5 65 ARG 65 66 66 ARG ARG A . n E 5 66 ILE 66 67 67 ILE ILE A . n E 5 67 GLY 67 68 68 GLY GLY A . n E 5 68 THR 68 69 69 THR THR A . n E 5 69 LEU 69 70 70 LEU LEU A . n E 5 70 ILE 70 71 71 ILE ILE A . n E 5 71 THR 71 72 72 THR THR A . n E 5 72 LEU 72 73 73 LEU LEU A . n E 5 73 GLY 73 74 74 GLY GLY A . n E 5 74 ILE 74 75 75 ILE ILE A . n E 5 75 GLY 75 76 76 GLY GLY A . n E 5 76 PRO 76 77 77 PRO PRO A . n E 5 77 ILE 77 78 78 ILE ILE A . n E 5 78 VAL 78 79 79 VAL VAL A . n E 5 79 THR 79 80 80 THR THR A . n E 5 80 ALA 80 81 81 ALA ALA A . n E 5 81 GLY 81 82 82 GLY GLY A . n E 5 82 ILE 82 83 83 ILE ILE A . n E 5 83 ILE 83 84 84 ILE ILE A . n E 5 84 MET 84 85 85 MET MET A . n E 5 85 GLN 85 86 86 GLN GLN A . n E 5 86 LEU 86 87 87 LEU LEU A . n E 5 87 LEU 87 88 88 LEU LEU A . n E 5 88 VAL 88 89 89 VAL VAL A . n E 5 89 GLY 89 90 90 GLY GLY A . n E 5 90 SER 90 91 91 SER SER A . n E 5 91 GLY 91 92 92 GLY GLY A . n E 5 92 ILE 92 93 93 ILE ILE A . n E 5 93 ILE 93 94 94 ILE ILE A . n E 5 94 GLN 94 95 95 GLN GLN A . n E 5 95 MET 95 96 96 MET MET A . n E 5 96 ASP 96 97 97 ASP ASP A . n E 5 97 LEU 97 98 98 LEU LEU A . n E 5 98 SER 98 99 99 SER SER A . n E 5 99 ILE 99 100 100 ILE ILE A . n E 5 100 PRO 100 101 101 PRO PRO A . n E 5 101 GLU 101 102 102 GLU GLU A . n E 5 102 ASN 102 103 103 ASN ASN A . n E 5 103 ARG 103 104 104 ARG ARG A . n E 5 104 ALA 104 105 105 ALA ALA A . n E 5 105 LEU 105 106 106 LEU LEU A . n E 5 106 PHE 106 107 107 PHE PHE A . n E 5 107 GLN 107 108 108 GLN GLN A . n E 5 108 GLY 108 109 109 GLY GLY A . n E 5 109 CYS 109 110 110 CYS CYS A . n E 5 110 GLN 110 111 111 GLN GLN A . n E 5 111 LYS 111 112 112 LYS LYS A . n E 5 112 LEU 112 113 113 LEU LEU A . n E 5 113 LEU 113 114 114 LEU LEU A . n E 5 114 SER 114 115 115 SER SER A . n E 5 115 ILE 115 116 116 ILE ILE A . n E 5 116 ILE 116 117 117 ILE ILE A . n E 5 117 MET 117 118 118 MET MET A . n E 5 118 CYS 118 119 119 CYS CYS A . n E 5 119 PHE 119 120 120 PHE PHE A . n E 5 120 VAL 120 121 121 VAL VAL A . n E 5 121 GLU 121 122 122 GLU GLU A . n E 5 122 ALA 122 123 123 ALA ALA A . n E 5 123 VAL 123 124 124 VAL VAL A . n E 5 124 LEU 124 125 125 LEU LEU A . n E 5 125 PHE 125 126 126 PHE PHE A . n E 5 126 VAL 126 127 127 VAL VAL A . n E 5 127 GLY 127 128 128 GLY GLY A . n E 5 128 ALA 128 129 129 ALA ALA A . n E 5 129 GLY 129 130 130 GLY GLY A . n E 5 130 ALA 130 131 131 ALA ALA A . n E 5 131 PHE 131 132 132 PHE PHE A . n E 5 132 GLY 132 133 133 GLY GLY A . n E 5 133 ILE 133 134 134 ILE ILE A . n E 5 134 LEU 134 135 135 LEU LEU A . n E 5 135 THR 135 136 136 THR THR A . n E 5 136 PRO 136 137 137 PRO PRO A . n E 5 137 LEU 137 138 138 LEU LEU A . n E 5 138 LEU 138 139 139 LEU LEU A . n E 5 139 ALA 139 140 140 ALA ALA A . n E 5 140 PHE 140 141 141 PHE PHE A . n E 5 141 LEU 141 142 142 LEU LEU A . n E 5 142 VAL 142 143 143 VAL VAL A . n E 5 143 ILE 143 144 144 ILE ILE A . n E 5 144 ILE 144 145 145 ILE ILE A . n E 5 145 GLN 145 146 146 GLN GLN A . n E 5 146 ILE 146 147 147 ILE ILE A . n E 5 147 ALA 147 148 148 ALA ALA A . n E 5 148 PHE 148 149 149 PHE PHE A . n E 5 149 GLY 149 150 150 GLY GLY A . n E 5 150 SER 150 151 151 SER SER A . n E 5 151 ILE 151 152 152 ILE ILE A . n E 5 152 ILE 152 153 153 ILE ILE A . n E 5 153 LEU 153 154 154 LEU LEU A . n E 5 154 ILE 154 155 155 ILE ILE A . n E 5 155 TYR 155 156 156 TYR TYR A . n E 5 156 LEU 156 157 157 LEU LEU A . n E 5 157 ASP 157 158 158 ASP ASP A . n E 5 158 GLU 158 159 159 GLU GLU A . n E 5 159 ILE 159 160 160 ILE ILE A . n E 5 160 VAL 160 161 161 VAL VAL A . n E 5 161 SER 161 162 162 SER SER A . n E 5 162 LYS 162 163 163 LYS LYS A . n E 5 163 TYR 163 164 164 TYR TYR A . n E 5 164 GLY 164 165 165 GLY GLY A . n E 5 165 ILE 165 166 166 ILE ILE A . n E 5 166 GLY 166 167 167 GLY GLY A . n E 5 167 SER 167 168 168 SER SER A . n E 5 168 GLY 168 169 169 GLY GLY A . n E 5 169 ILE 169 170 170 ILE ILE A . n E 5 170 GLY 170 171 171 GLY GLY A . n E 5 171 LEU 171 172 172 LEU LEU A . n E 5 172 PHE 172 173 173 PHE PHE A . n E 5 173 ILE 173 174 174 ILE ILE A . n E 5 174 ALA 174 175 175 ALA ALA A . n E 5 175 ALA 175 176 176 ALA ALA A . n E 5 176 GLY 176 177 177 GLY GLY A . n E 5 177 VAL 177 178 178 VAL VAL A . n E 5 178 SER 178 179 179 SER SER A . n E 5 179 GLN 179 180 180 GLN GLN A . n E 5 180 THR 180 181 181 THR THR A . n E 5 181 ILE 181 182 182 ILE ILE A . n E 5 182 PHE 182 183 183 PHE PHE A . n E 5 183 VAL 183 184 184 VAL VAL A . n E 5 184 GLY 184 185 185 GLY GLY A . n E 5 185 ALA 185 186 186 ALA ALA A . n E 5 186 LEU 186 187 187 LEU LEU A . n E 5 187 GLY 187 188 188 GLY GLY A . n E 5 188 PRO 188 189 189 PRO PRO A . n E 5 189 GLU 189 190 190 GLU GLU A . n E 5 190 GLY 190 191 191 GLY GLY A . n E 5 191 TYR 191 192 192 TYR TYR A . n E 5 192 LEU 192 193 193 LEU LEU A . n E 5 193 TRP 193 194 194 TRP TRP A . n E 5 194 LYS 194 195 195 LYS LYS A . n E 5 195 PHE 195 196 196 PHE PHE A . n E 5 196 LEU 196 197 197 LEU LEU A . n E 5 197 ASN 197 198 198 ASN ASN A . n E 5 198 SER 198 199 199 SER SER A . n E 5 199 LEU 199 200 200 LEU LEU A . n E 5 200 ILE 200 201 201 ILE ILE A . n E 5 201 GLN 201 202 202 GLN GLN A . n E 5 202 GLY 202 203 203 GLY GLY A . n E 5 203 VAL 203 204 204 VAL VAL A . n E 5 204 PRO 204 205 205 PRO PRO A . n E 5 205 ASN 205 206 206 ASN ASN A . n E 5 206 ILE 206 207 207 ILE ILE A . n E 5 207 GLU 207 208 208 GLU GLU A . n E 5 208 TYR 208 209 209 TYR TYR A . n E 5 209 ILE 209 210 210 ILE ILE A . n E 5 210 ALA 210 211 211 ALA ALA A . n E 5 211 PRO 211 212 212 PRO PRO A . n E 5 212 ILE 212 213 213 ILE ILE A . n E 5 213 ILE 213 214 214 ILE ILE A . n E 5 214 GLY 214 215 215 GLY GLY A . n E 5 215 THR 215 216 216 THR THR A . n E 5 216 ILE 216 217 217 ILE ILE A . n E 5 217 ILE 217 218 218 ILE ILE A . n E 5 218 VAL 218 219 219 VAL VAL A . n E 5 219 PHE 219 220 220 PHE PHE A . n E 5 220 LEU 220 221 221 LEU LEU A . n E 5 221 MET 221 222 222 MET MET A . n E 5 222 VAL 222 223 223 VAL VAL A . n E 5 223 VAL 223 224 224 VAL VAL A . n E 5 224 TYR 224 225 225 TYR TYR A . n E 5 225 ALA 225 226 226 ALA ALA A . n E 5 226 GLU 226 227 227 GLU GLU A . n E 5 227 CYS 227 228 228 CYS CYS A . n E 5 228 MET 228 229 229 MET MET A . n E 5 229 ARG 229 230 230 ARG ARG A . n E 5 230 ARG 230 231 231 ARG ARG A . n E 5 231 ARG 231 232 232 ARG ARG A . n E 5 232 ILE 232 233 233 ILE ILE A . n E 5 233 VAL 233 234 234 VAL VAL A . n E 5 234 VAL 234 235 235 VAL VAL A . n E 5 235 ASN 235 236 236 ASN ASN A . n E 5 236 TYR 236 237 237 TYR TYR A . n E 5 237 ALA 237 238 238 ALA ALA A . n E 5 238 LYS 238 239 239 LYS LYS A . n E 5 239 ARG 239 240 240 ARG ARG A . n E 5 240 GLN 240 241 241 GLN GLN A . n E 5 241 GLN 241 242 242 GLN GLN A . n E 5 242 GLY 242 243 243 GLY GLY A . n E 5 243 ARG 243 244 244 ARG ARG A . n E 5 244 ARG 244 245 245 ARG ARG A . n E 5 245 VAL 245 246 246 VAL VAL A . n E 5 246 TYR 246 247 247 TYR TYR A . n E 5 247 ALA 247 248 248 ALA ALA A . n E 5 248 ALA 248 249 249 ALA ALA A . n E 5 249 GLN 249 250 250 GLN GLN A . n E 5 250 SER 250 251 251 SER SER A . n E 5 251 THR 251 252 252 THR THR A . n E 5 252 HIS 252 253 253 HIS HIS A . n E 5 253 LEU 253 254 254 LEU LEU A . n E 5 254 PRO 254 255 255 PRO PRO A . n E 5 255 LEU 255 256 256 LEU LEU A . n E 5 256 LYS 256 257 257 LYS LYS A . n E 5 257 VAL 257 258 258 VAL VAL A . n E 5 258 VAL 258 259 259 VAL VAL A . n E 5 259 TYR 259 260 260 TYR TYR A . n E 5 260 VAL 260 261 261 VAL VAL A . n E 5 261 SER 261 262 262 SER SER A . n E 5 262 ASN 262 263 263 ASN ASN A . n E 5 263 ILE 263 264 264 ILE ILE A . n E 5 264 PRO 264 265 265 PRO PRO A . n E 5 265 VAL 265 266 266 VAL VAL A . n E 5 266 ILE 266 267 267 ILE ILE A . n E 5 267 LEU 267 268 268 LEU LEU A . n E 5 268 ALA 268 269 269 ALA ALA A . n E 5 269 ALA 269 270 270 ALA ALA A . n E 5 270 ALA 270 271 271 ALA ALA A . n E 5 271 LEU 271 272 272 LEU LEU A . n E 5 272 PHE 272 273 273 PHE PHE A . n E 5 273 ALA 273 274 274 ALA ALA A . n E 5 274 ASN 274 275 275 ASN ASN A . n E 5 275 ILE 275 276 276 ILE ILE A . n E 5 276 GLN 276 277 277 GLN GLN A . n E 5 277 LEU 277 278 278 LEU LEU A . n E 5 278 TRP 278 279 279 TRP TRP A . n E 5 279 GLY 279 280 280 GLY GLY A . n E 5 280 LEU 280 281 281 LEU LEU A . n E 5 281 ALA 281 282 282 ALA ALA A . n E 5 282 LEU 282 283 283 LEU LEU A . n E 5 283 TYR 283 284 284 TYR TYR A . n E 5 284 ARG 284 285 285 ARG ARG A . n E 5 285 MET 285 286 286 MET MET A . n E 5 286 GLY 286 287 287 GLY GLY A . n E 5 287 ILE 287 288 288 ILE ILE A . n E 5 288 PRO 288 289 289 PRO PRO A . n E 5 289 ILE 289 290 290 ILE ILE A . n E 5 290 LEU 290 291 291 LEU LEU A . n E 5 291 GLY 291 292 292 GLY GLY A . n E 5 292 HIS 292 293 293 HIS HIS A . n E 5 293 TYR 293 294 294 TYR TYR A . n E 5 294 GLU 294 295 295 GLU GLU A . n E 5 295 GLY 295 296 296 GLY GLY A . n E 5 296 GLY 296 297 297 GLY GLY A . n E 5 297 ARG 297 298 298 ARG ARG A . n E 5 298 ALA 298 299 299 ALA ALA A . n E 5 299 VAL 299 300 300 VAL VAL A . n E 5 300 ASP 300 301 301 ASP ASP A . n E 5 301 GLY 301 302 302 GLY GLY A . n E 5 302 ILE 302 303 303 ILE ILE A . n E 5 303 ALA 303 304 304 ALA ALA A . n E 5 304 TYR 304 305 305 TYR TYR A . n E 5 305 TYR 305 306 306 TYR TYR A . n E 5 306 LEU 306 307 307 LEU LEU A . n E 5 307 SER 307 308 308 SER SER A . n E 5 308 THR 308 309 309 THR THR A . n E 5 309 PRO 309 310 310 PRO PRO A . n E 5 310 TYR 310 311 311 TYR TYR A . n E 5 311 GLY 311 312 312 GLY GLY A . n E 5 312 LEU 312 313 313 LEU LEU A . n E 5 313 SER 313 314 314 SER SER A . n E 5 314 SER 314 315 315 SER SER A . n E 5 315 VAL 315 316 316 VAL VAL A . n E 5 316 ILE 316 317 317 ILE ILE A . n E 5 317 SER 317 318 318 SER SER A . n E 5 318 ASP 318 319 319 ASP ASP A . n E 5 319 PRO 319 320 320 PRO PRO A . n E 5 320 ILE 320 321 321 ILE ILE A . n E 5 321 HIS 321 322 322 HIS HIS A . n E 5 322 ALA 322 323 323 ALA ALA A . n E 5 323 ILE 323 324 324 ILE ILE A . n E 5 324 VAL 324 325 325 VAL VAL A . n E 5 325 TYR 325 326 326 TYR TYR A . n E 5 326 MET 326 327 327 MET MET A . n E 5 327 ILE 327 328 328 ILE ILE A . n E 5 328 ALA 328 329 329 ALA ALA A . n E 5 329 MET 329 330 330 MET MET A . n E 5 330 ILE 330 331 331 ILE ILE A . n E 5 331 ILE 331 332 332 ILE ILE A . n E 5 332 THR 332 333 333 THR THR A . n E 5 333 CYS 333 334 334 CYS CYS A . n E 5 334 VAL 334 335 335 VAL VAL A . n E 5 335 MET 335 336 336 MET MET A . n E 5 336 PHE 336 337 337 PHE PHE A . n E 5 337 GLY 337 338 338 GLY GLY A . n E 5 338 ILE 338 339 339 ILE ILE A . n E 5 339 PHE 339 340 340 PHE PHE A . n E 5 340 TRP 340 341 341 TRP TRP A . n E 5 341 VAL 341 342 342 VAL VAL A . n E 5 342 GLU 342 343 343 GLU GLU A . n E 5 343 THR 343 344 344 THR THR A . n E 5 344 THR 344 345 345 THR THR A . n E 5 345 GLY 345 346 346 GLY GLY A . n E 5 346 LEU 346 347 347 LEU LEU A . n E 5 347 ASP 347 348 348 ASP ASP A . n E 5 348 PRO 348 349 349 PRO PRO A . n E 5 349 LYS 349 350 350 LYS LYS A . n E 5 350 SER 350 351 351 SER SER A . n E 5 351 MET 351 352 352 MET MET A . n E 5 352 ALA 352 353 353 ALA ALA A . n E 5 353 LYS 353 354 354 LYS LYS A . n E 5 354 ARG 354 355 355 ARG ARG A . n E 5 355 ILE 355 356 356 ILE ILE A . n E 5 356 LYS 356 357 357 LYS LYS A . n E 5 357 LYS 357 358 358 LYS LYS A . n E 5 358 SER 358 359 359 SER SER A . n E 5 359 GLY 359 360 360 GLY GLY A . n E 5 360 ALA 360 361 361 ALA ALA A . n E 5 361 PHE 361 362 362 PHE PHE A . n E 5 362 VAL 362 363 363 VAL VAL A . n E 5 363 PRO 363 364 364 PRO PRO A . n E 5 364 GLY 364 365 365 GLY GLY A . n E 5 365 ILE 365 366 366 ILE ILE A . n E 5 366 ARG 366 367 367 ARG ARG A . n E 5 367 PRO 367 368 368 PRO PRO A . n E 5 368 GLY 368 369 369 GLY GLY A . n E 5 369 GLU 369 370 370 GLU GLU A . n E 5 370 GLN 370 371 371 GLN GLN A . n E 5 371 THR 371 372 372 THR THR A . n E 5 372 ALA 372 373 373 ALA ALA A . n E 5 373 LYS 373 374 374 LYS LYS A . n E 5 374 TYR 374 375 375 TYR TYR A . n E 5 375 ILE 375 376 376 ILE ILE A . n E 5 376 GLU 376 377 377 GLU GLU A . n E 5 377 HIS 377 378 378 HIS HIS A . n E 5 378 ARG 378 379 379 ARG ARG A . n E 5 379 LEU 379 380 380 LEU LEU A . n E 5 380 LYS 380 381 381 LYS LYS A . n E 5 381 ARG 381 382 382 ARG ARG A . n E 5 382 TYR 382 383 383 TYR TYR A . n E 5 383 ILE 383 384 384 ILE ILE A . n E 5 384 PRO 384 385 385 PRO PRO A . n E 5 385 PRO 385 386 386 PRO PRO A . n E 5 386 LEU 386 387 387 LEU LEU A . n E 5 387 THR 387 388 388 THR THR A . n E 5 388 VAL 388 389 389 VAL VAL A . n E 5 389 MET 389 390 390 MET MET A . n E 5 390 SER 390 391 391 SER SER A . n E 5 391 SER 391 392 392 SER SER A . n E 5 392 ALA 392 393 393 ALA ALA A . n E 5 393 PHE 393 394 394 PHE PHE A . n E 5 394 VAL 394 395 395 VAL VAL A . n E 5 395 GLY 395 396 396 GLY GLY A . n E 5 396 PHE 396 397 397 PHE PHE A . n E 5 397 LEU 397 398 398 LEU LEU A . n E 5 398 ALA 398 399 399 ALA ALA A . n E 5 399 THR 399 400 400 THR THR A . n E 5 400 ILE 400 401 401 ILE ILE A . n E 5 401 ALA 401 402 402 ALA ALA A . n E 5 402 ASN 402 403 403 ASN ASN A . n E 5 403 PHE 403 404 404 PHE PHE A . n E 5 404 ILE 404 405 405 ILE ILE A . n E 5 405 GLY 405 406 406 GLY GLY A . n E 5 406 ALA 406 407 407 ALA ALA A . n E 5 407 LEU 407 408 408 LEU LEU A . n E 5 408 GLY 408 409 409 GLY GLY A . n E 5 409 GLY 409 410 410 GLY GLY A . n E 5 410 GLY 410 411 411 GLY GLY A . n E 5 411 THR 411 412 412 THR THR A . n E 5 412 GLY 412 413 413 GLY GLY A . n E 5 413 VAL 413 414 414 VAL VAL A . n E 5 414 LEU 414 415 415 LEU LEU A . n E 5 415 LEU 415 416 416 LEU LEU A . n E 5 416 THR 416 417 417 THR THR A . n E 5 417 VAL 417 418 418 VAL VAL A . n E 5 418 SER 418 419 419 SER SER A . n E 5 419 ILE 419 420 420 ILE ILE A . n E 5 420 VAL 420 421 421 VAL VAL A . n E 5 421 TYR 421 422 422 TYR TYR A . n E 5 422 ARG 422 423 423 ARG ARG A . n E 5 423 MET 423 424 424 MET MET A . n E 5 424 TYR 424 425 425 TYR TYR A . n E 5 425 GLU 425 426 426 GLU GLU A . n E 5 426 GLN 426 427 427 GLN GLN A . n E 5 427 LEU 427 428 428 LEU LEU A . n E 5 428 LEU 428 429 429 LEU LEU A . n E 5 429 ARG 429 430 430 ARG ARG A . n E 5 430 GLU 430 431 431 GLU GLU A . n E 5 431 LYS 431 432 432 LYS LYS A . n E 5 432 VAL 432 433 433 VAL VAL A . n E 5 433 SER 433 434 434 SER SER A . n E 5 434 GLU 434 435 435 GLU GLU A . n E 5 435 LEU 435 436 436 LEU LEU A . n E 5 436 HIS 436 437 437 HIS HIS A . n E 5 437 PRO 437 438 438 PRO PRO A . n E 5 438 ALA 438 439 439 ALA ALA A . n E 5 439 ILE 439 440 440 ILE ILE A . n E 5 440 ALA 440 441 441 ALA ALA A . n E 5 441 LYS 441 442 442 LYS LYS A . n E 5 442 LEU 442 443 443 LEU LEU A . n F 6 1 THR 1 2 2 THR THR B . n F 6 2 LYS 2 3 3 LYS LYS B . n F 6 3 GLY 3 4 4 GLY GLY B . n F 6 4 LYS 4 5 5 LYS LYS B . n F 6 5 ALA 5 6 6 ALA ALA B . n F 6 6 THR 6 7 7 THR THR B . n F 6 7 VAL 7 8 8 VAL VAL B . n F 6 8 ALA 8 9 9 ALA ALA B . n F 6 9 PHE 9 10 10 PHE PHE B . n F 6 10 ALA 10 11 11 ALA ALA B . n F 6 11 ARG 11 12 12 ARG ARG B . n F 6 12 GLU 12 13 13 GLU GLU B . n F 6 13 ALA 13 14 14 ALA ALA B . n F 6 14 ARG 14 15 15 ARG ARG B . n F 6 15 THR 15 16 16 THR THR B . n F 6 16 GLU 16 17 17 GLU GLU B . n F 6 17 VAL 17 18 18 VAL VAL B . n F 6 18 ARG 18 19 19 ARG ARG B . n F 6 19 LYS 19 20 20 LYS LYS B . n F 6 20 VAL 20 21 21 VAL VAL B . n F 6 21 ILE 21 22 22 ILE ILE B . n F 6 22 TRP 22 23 23 TRP TRP B . n F 6 23 PRO 23 24 24 PRO PRO B . n F 6 24 THR 24 25 25 THR THR B . n F 6 25 ARG 25 26 26 ARG ARG B . n F 6 26 LYS 26 27 27 LYS LYS B . n F 6 27 PRO 27 28 28 PRO PRO B . n F 6 28 THR 28 29 29 THR THR B . n F 6 29 LYS 29 30 30 LYS LYS B . n F 6 30 ASP 30 31 31 ASP ASP B . n F 6 31 GLU 31 32 32 GLU GLU B . n F 6 32 TYR 32 33 33 TYR TYR B . n F 6 33 LEU 33 34 34 LEU LEU B . n F 6 34 ALA 34 35 35 ALA ALA B . n F 6 35 VAL 35 36 36 VAL VAL B . n F 6 36 ALA 36 37 37 ALA ALA B . n F 6 37 LYS 37 38 38 LYS LYS B . n F 6 38 VAL 38 39 39 VAL VAL B . n F 6 39 THR 39 40 40 THR THR B . n F 6 40 ALA 40 41 41 ALA ALA B . n F 6 41 LEU 41 42 42 LEU LEU B . n F 6 42 GLY 42 43 43 GLY GLY B . n F 6 43 ILE 43 44 44 ILE ILE B . n F 6 44 SER 44 45 45 SER SER B . n F 6 45 LEU 45 46 46 LEU LEU B . n F 6 46 LEU 46 47 47 LEU LEU B . n F 6 47 GLY 47 48 48 GLY GLY B . n F 6 48 ILE 48 49 49 ILE ILE B . n F 6 49 ILE 49 50 50 ILE ILE B . n F 6 50 GLY 50 51 51 GLY GLY B . n F 6 51 TYR 51 52 52 TYR TYR B . n F 6 52 ILE 52 53 53 ILE ILE B . n F 6 53 ILE 53 54 54 ILE ILE B . n F 6 54 HIS 54 55 55 HIS HIS B . n F 6 55 VAL 55 56 56 VAL VAL B . n F 6 56 PRO 56 57 57 PRO PRO B . n F 6 57 ALA 57 58 58 ALA ALA B . n F 6 58 THR 58 59 59 THR THR B . n F 6 59 TYR 59 60 60 TYR TYR B . n F 6 60 ILE 60 61 61 ILE ILE B . n F 6 61 LYS 61 62 62 LYS LYS B . n F 6 62 GLY 62 63 63 GLY GLY B . n F 6 63 ILE 63 64 64 ILE ILE B . n F 6 64 LEU 64 65 65 LEU LEU B . n F 6 65 LYS 65 66 66 LYS LYS B . n G 7 1 GLU 1 21 21 GLU GLU C . n G 7 2 THR 2 22 22 THR THR C . n G 7 3 PHE 3 23 23 PHE PHE C . n G 7 4 SER 4 24 24 SER SER C . n G 7 5 LYS 5 25 25 LYS LYS C . n G 7 6 ILE 6 26 26 ILE ILE C . n G 7 7 ARG 7 27 27 ARG ARG C . n G 7 8 VAL 8 28 28 VAL VAL C . n G 7 9 LYS 9 29 29 LYS LYS C . n G 7 10 PRO 10 30 30 PRO PRO C . n G 7 11 GLU 11 31 31 GLU GLU C . n G 7 12 HIS 12 32 32 HIS HIS C . n G 7 13 VAL 13 33 33 VAL VAL C . n G 7 14 ILE 14 34 34 ILE ILE C . n G 7 15 GLY 15 35 35 GLY GLY C . n G 7 16 VAL 16 36 36 VAL VAL C . n G 7 17 THR 17 37 37 THR THR C . n G 7 18 VAL 18 38 38 VAL VAL C . n G 7 19 ALA 19 39 39 ALA ALA C . n G 7 20 PHE 20 40 40 PHE PHE C . n G 7 21 VAL 21 41 41 VAL VAL C . n G 7 22 ILE 22 42 42 ILE ILE C . n G 7 23 ILE 23 43 43 ILE ILE C . n G 7 24 GLU 24 44 44 GLU GLU C . n G 7 25 ALA 25 45 45 ALA ALA C . n G 7 26 ILE 26 46 46 ILE ILE C . n G 7 27 LEU 27 47 47 LEU LEU C . n G 7 28 THR 28 48 48 THR THR C . n G 7 29 TYR 29 49 49 TYR TYR C . n G 7 30 GLY 30 50 50 GLY GLY C . n G 7 31 ARG 31 51 51 ARG ARG C . n G 7 32 PHE 32 52 52 PHE PHE C . n # _exptl.entry_id 3BO0 _exptl.method 'ELECTRON MICROSCOPY' _exptl.crystals_number ? # _refine_hist.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4169 _refine_hist.pdbx_number_atoms_nucleic_acid 2263 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 6432 _refine_hist.d_res_high . _refine_hist.d_res_low . # _database_PDB_matrix.entry_id 3BO0 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3BO0 _struct.title 'Ribosome-SecY complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3BO0 _struct_keywords.pdbx_keywords RIBOSOME _struct_keywords.text 'Ribosome-SecY complex, protein translocation, RIBOSOME' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 GB 1P86_0 33357927 1 79 CGGUAAGGUGAUAUGAACCGUUAUAAC ? 2 GB 1P86_0 33357927 2 478 AAAGAACCCCGGCGAGGGGAGUGAAAA ? 3 GB 1P86_0 33357927 3 1385 ACAGGUUAAUAUUCCUGUA ? 4 GB 1P86_0 33357927 4 1518 CGUGAUGACGAGGCACUACGGUGCUGAAGCAA ? 5 PDB 3BO0 3BO0 5 1 ;KKLIPILEKIPEVELPVKEITFKEKLKWTGIVLVLYFIMGCIDVYTAGAQIPAIFEFWQTITASRIGTLITLGIGPIVTA GIIMQLLVGSGIIQMDLSIPENRALFQGCQKLLSIIMCFVEAVLFVGAGAFGILTPLLAFLVIIQIAFGSIILIYLDEIV SKYGIGSGIGLFIAAGVSQTIFVGALGPEGYLWKFLNSLIQGVPNIEYIAPIIGTIIVFLMVVYAECMRRRIVVNYAKRQ QGRRVYAAQSTHLPLKVVYVSNIPVILAAALFANIQLWGLALYRMGIPILGHYEGGRAVDGIAYYLSTPYGLSSVISDPI HAIVYMIAMIITCVMFGIFWVETTGLDPKSMAKRIKKSGAFVPGIRPGEQTAKYIEHRLKRYIPPLTVMSSAFVGFLATI ANFIGALGGGTGVLLTVSIVYRMYEQLLREKVSELHPAIAKL ; ? 6 PDB 3BO0 3BO0 6 1 TKGKATVAFAREARTEVRKVIWPTRKPTKDEYLAVAKVTALGISLLGIIGYIIHVPATYIKGILK ? 7 PDB 3BO0 3BO0 7 1 ETFSKIRVKPEHVIGVTVAFVIIEAILTYGRF ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3BO0 D 1 ? 27 ? 33357927 79 ? 105 ? 79 105 2 2 3BO0 E 1 ? 27 ? 33357927 478 ? 504 ? 478 504 3 3 3BO0 F 1 ? 19 ? 33357927 1385 ? 1403 ? 1385 1403 4 4 3BO0 G 1 ? 32 ? 33357927 1518 ? 1549 ? 1518 1549 5 5 3BO0 A 1 ? 442 ? 3BO0 2 ? 443 ? 2 443 6 6 3BO0 B 1 ? 65 ? 3BO0 2 ? 66 ? 2 66 7 7 3BO0 C 1 ? 32 ? 3BO0 21 ? 52 ? 21 52 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ILE E 4 ? LYS E 9 ? ILE A 5 LYS A 10 1 ? 6 HELX_P HELX_P2 2 PHE E 22 ? GLY E 40 ? PHE A 23 GLY A 41 1 ? 19 HELX_P HELX_P3 3 GLN E 59 ? THR E 62 ? GLN A 60 THR A 63 1 ? 4 HELX_P HELX_P4 4 GLY E 73 ? LEU E 87 ? GLY A 74 LEU A 88 1 ? 15 HELX_P HELX_P5 5 PRO E 100 ? ALA E 128 ? PRO A 101 ALA A 129 1 ? 29 HELX_P HELX_P6 6 PRO E 136 ? TYR E 163 ? PRO A 137 TYR A 164 1 ? 28 HELX_P HELX_P7 7 GLY E 168 ? LEU E 186 ? GLY A 169 LEU A 187 1 ? 19 HELX_P HELX_P8 8 TYR E 191 ? GLN E 201 ? TYR A 192 GLN A 202 1 ? 11 HELX_P HELX_P9 9 ILE E 206 ? TYR E 224 ? ILE A 207 TYR A 225 1 ? 19 HELX_P HELX_P10 10 TYR E 259 ? ALA E 281 ? TYR A 260 ALA A 282 1 ? 23 HELX_P HELX_P11 11 GLY E 301 ? LEU E 306 ? GLY A 302 LEU A 307 1 ? 6 HELX_P HELX_P12 12 PRO E 319 ? VAL E 341 ? PRO A 320 VAL A 342 1 ? 23 HELX_P HELX_P13 13 PRO E 348 ? ILE E 355 ? PRO A 349 ILE A 356 1 ? 8 HELX_P HELX_P14 14 GLU E 376 ? ILE E 383 ? GLU A 377 ILE A 384 1 ? 8 HELX_P HELX_P15 15 SER E 390 ? ILE E 404 ? SER A 391 ILE A 405 1 ? 15 HELX_P HELX_P16 16 GLY E 410 ? SER E 433 ? GLY A 411 SER A 434 1 ? 24 HELX_P HELX_P17 17 LYS F 2 ? VAL F 20 ? LYS B 3 VAL B 21 1 ? 19 HELX_P HELX_P18 18 THR F 28 ? ILE F 63 ? THR B 29 ILE B 64 1 ? 36 HELX_P HELX_P19 19 PRO G 10 ? LEU G 27 ? PRO C 30 LEU C 47 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 3 N1 ? ? ? 1_555 A C 27 N3 ? ? D G 81 D C 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 3 N2 ? ? ? 1_555 A C 27 O2 ? ? D G 81 D C 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 3 O6 ? ? ? 1_555 A C 27 N4 ? ? D G 81 D C 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A U 4 O2 ? ? ? 1_555 A A 26 N6 ? ? D U 82 D A 104 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog5 hydrog ? ? A A 5 N3 ? ? ? 1_555 A A 25 N6 ? ? D A 83 D A 103 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog6 hydrog ? ? A A 6 N3 ? ? ? 1_555 A G 20 N2 ? ? D A 84 D G 98 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog7 hydrog ? ? A G 7 N1 ? ? ? 1_555 A C 19 N3 ? ? D G 85 D C 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 7 N2 ? ? ? 1_555 A C 19 O2 ? ? D G 85 D C 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 7 O6 ? ? ? 1_555 A C 19 N4 ? ? D G 85 D C 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 7 N2 ? ? ? 1_555 A A 25 N3 ? ? D G 85 D A 103 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog11 hydrog ? ? A G 8 N1 ? ? ? 1_555 A C 18 N3 ? ? D G 86 D C 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 8 N2 ? ? ? 1_555 A C 18 O2 ? ? D G 86 D C 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 8 O6 ? ? ? 1_555 A C 18 N4 ? ? D G 86 D C 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A U 9 N3 ? ? ? 1_555 A A 17 N1 ? ? D U 87 D A 95 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A U 9 O4 ? ? ? 1_555 A A 17 N6 ? ? D U 87 D A 95 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B A 2 N1 ? ? ? 1_555 B A 26 N6 ? ? E A 479 E A 503 1_555 ? ? ? ? ? ? TYPE_1_PAIR ? ? ? hydrog17 hydrog ? ? B A 2 N6 ? ? ? 1_555 B A 26 N1 ? ? E A 479 E A 503 1_555 ? ? ? ? ? ? TYPE_1_PAIR ? ? ? hydrog18 hydrog ? ? B A 6 N6 ? ? ? 1_555 B A 20 N3 ? ? E A 483 E A 497 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog19 hydrog ? ? B C 7 N3 ? ? ? 1_555 B G 19 N1 ? ? E C 484 E G 496 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B C 7 N4 ? ? ? 1_555 B G 19 O6 ? ? E C 484 E G 496 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B C 7 O2 ? ? ? 1_555 B G 19 N2 ? ? E C 484 E G 496 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B C 8 N3 ? ? ? 1_555 B G 18 N1 ? ? E C 485 E G 495 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B C 8 N4 ? ? ? 1_555 B G 18 O6 ? ? E C 485 E G 495 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B C 8 O2 ? ? ? 1_555 B G 18 N2 ? ? E C 485 E G 495 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B C 9 N3 ? ? ? 1_555 B G 17 N1 ? ? E C 486 E G 494 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B C 9 N4 ? ? ? 1_555 B G 17 O6 ? ? E C 486 E G 494 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B C 9 O2 ? ? ? 1_555 B G 17 N2 ? ? E C 486 E G 494 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B C 10 N3 ? ? ? 1_555 B G 16 N1 ? ? E C 487 E G 493 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B C 10 N4 ? ? ? 1_555 B G 16 O6 ? ? E C 487 E G 493 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B C 10 O2 ? ? ? 1_555 B G 16 N2 ? ? E C 487 E G 493 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B G 11 N2 ? ? ? 1_555 B A 15 N7 ? ? E G 488 E A 492 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog32 hydrog ? ? B U 22 N3 ? ? ? 1_555 B A 26 N7 ? ? E U 499 E A 503 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog33 hydrog ? ? B U 22 O2 ? ? ? 1_555 B A 26 N6 ? ? E U 499 E A 503 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog34 hydrog ? ? C A 1 N1 ? ? ? 1_555 C U 18 N3 ? ? F A 1385 F U 1402 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C A 1 N6 ? ? ? 1_555 C U 18 O4 ? ? F A 1385 F U 1402 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C C 2 N3 ? ? ? 1_555 C G 17 N1 ? ? F C 1386 F G 1401 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C C 2 N4 ? ? ? 1_555 C G 17 O6 ? ? F C 1386 F G 1401 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C C 2 O2 ? ? ? 1_555 C G 17 N2 ? ? F C 1386 F G 1401 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C A 3 N1 ? ? ? 1_555 C U 16 N3 ? ? F A 1387 F U 1400 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C A 3 N6 ? ? ? 1_555 C U 16 O4 ? ? F A 1387 F U 1400 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C G 4 N1 ? ? ? 1_555 C C 15 N3 ? ? F G 1388 F C 1399 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C G 4 N2 ? ? ? 1_555 C C 15 O2 ? ? F G 1388 F C 1399 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C G 4 O6 ? ? ? 1_555 C C 15 N4 ? ? F G 1388 F C 1399 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C G 5 N1 ? ? ? 1_555 C C 14 N3 ? ? F G 1389 F C 1398 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C G 5 N2 ? ? ? 1_555 C C 14 O2 ? ? F G 1389 F C 1398 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C G 5 O6 ? ? ? 1_555 C C 14 N4 ? ? F G 1389 F C 1398 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C U 6 N3 ? ? ? 1_555 C A 11 N7 ? ? F U 1390 F A 1395 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog48 hydrog ? ? C U 6 O2 ? ? ? 1_555 C A 11 N6 ? ? F U 1390 F A 1395 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog49 hydrog ? ? D C 9 N3 ? ? ? 1_555 D G 29 N1 ? ? G C 1526 G G 1546 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? D C 9 N4 ? ? ? 1_555 D G 29 O6 ? ? G C 1526 G G 1546 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? D C 9 O2 ? ? ? 1_555 D G 29 N2 ? ? G C 1526 G G 1546 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? D G 10 N2 ? ? ? 1_555 D A 28 N7 ? ? G G 1527 G A 1545 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog53 hydrog ? ? D G 10 N3 ? ? ? 1_555 D A 28 N6 ? ? G G 1527 G A 1545 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog54 hydrog ? ? D A 11 N7 ? ? ? 1_555 D G 26 N2 ? ? G A 1528 G G 1543 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog55 hydrog ? ? D G 12 N1 ? ? ? 1_555 D U 25 O2 ? ? G G 1529 G U 1542 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog56 hydrog ? ? D G 12 O6 ? ? ? 1_555 D U 25 N3 ? ? G G 1529 G U 1542 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog57 hydrog ? ? D G 13 N1 ? ? ? 1_555 D C 24 N3 ? ? G G 1530 G C 1541 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? D G 13 N2 ? ? ? 1_555 D C 24 O2 ? ? G G 1530 G C 1541 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? D G 13 O6 ? ? ? 1_555 D C 24 N4 ? ? G G 1530 G C 1541 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? D C 14 N3 ? ? ? 1_555 D G 23 N1 ? ? G C 1531 G G 1540 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? D C 14 N4 ? ? ? 1_555 D G 23 O6 ? ? G C 1531 G G 1540 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? D C 14 O2 ? ? ? 1_555 D G 23 N2 ? ? G C 1531 G G 1540 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? D A 15 N1 ? ? ? 1_555 D U 22 N3 ? ? G A 1532 G U 1539 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? D A 15 N6 ? ? ? 1_555 D U 22 O4 ? ? G A 1532 G U 1539 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? D C 16 N3 ? ? ? 1_555 D G 21 N1 ? ? G C 1533 G G 1538 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? D C 16 N4 ? ? ? 1_555 D G 21 O6 ? ? G C 1533 G G 1538 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? D C 16 O2 ? ? ? 1_555 D G 21 N2 ? ? G C 1533 G G 1538 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? D C 19 O2 ? ? ? 1_555 D G 20 N1 ? ? G C 1536 G G 1537 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 VAL 233 E . ? VAL 234 A VAL 234 E ? VAL 235 A 1 0.35 2 GLN 240 E . ? GLN 241 A GLN 241 E ? GLN 242 A 1 -0.02 3 GLN 241 E . ? GLN 242 A GLY 242 E ? GLY 243 A 1 -0.04 4 LEU 253 E . ? LEU 254 A PRO 254 E ? PRO 255 A 1 -0.12 5 THR 371 E . ? THR 372 A ALA 372 E ? ALA 373 A 1 -0.06 6 VAL 388 E . ? VAL 389 A MET 389 E ? MET 390 A 1 0.22 7 MET 389 E . ? MET 390 A SER 390 E ? SER 391 A 1 0.01 8 LYS 26 F . ? LYS 27 B PRO 27 F ? PRO 28 B 1 -0.62 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A ALA 393 ? ? CB A PHE 397 ? ? 1.51 2 1 O A THR 388 ? ? O A VAL 389 ? ? 1.61 3 1 O A ILE 233 ? ? CG2 A VAL 234 ? ? 1.68 4 1 CG2 A THR 372 ? ? CA A ALA 373 ? ? 1.69 5 1 CA A GLY 360 ? ? OE2 A GLU 370 ? ? 1.82 6 1 CG2 A VAL 335 ? ? OG A SER 392 ? ? 1.88 7 1 O B HIS 55 ? ? CG B PRO 57 ? ? 1.91 8 1 O B HIS 55 ? ? CD B PRO 57 ? ? 1.98 9 1 O B ALA 58 ? ? N B ILE 61 ? ? 2.07 10 1 O B ALA 58 ? ? N B TYR 60 ? ? 2.14 11 1 ND2 A ASN 236 ? ? CB A SER 251 ? ? 2.18 12 1 O A GLN 371 ? ? O A ALA 373 ? ? 2.19 13 1 CG A MET 390 ? ? NH1 B ARG 15 ? ? 2.19 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C A THR 309 ? ? N A PRO 310 ? ? CA A PRO 310 ? ? 129.93 119.30 10.63 1.50 Y 2 1 C A VAL 363 ? ? N A PRO 364 ? ? CD A PRO 364 ? ? 109.74 128.40 -18.66 2.10 Y 3 1 C A ARG 367 ? ? N A PRO 368 ? ? CD A PRO 368 ? ? 115.33 128.40 -13.07 2.10 Y 4 1 C A ILE 384 ? ? N A PRO 385 ? ? CD A PRO 385 ? ? 112.69 128.40 -15.71 2.10 Y 5 1 C B TRP 23 ? ? N B PRO 24 ? ? CD B PRO 24 ? ? 112.63 128.40 -15.77 2.10 Y 6 1 C B VAL 56 ? ? N B PRO 57 ? ? CD B PRO 57 ? ? 110.41 128.40 -17.99 2.10 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 4 ? ? -65.06 28.98 2 1 PRO A 12 ? ? -47.05 165.41 3 1 TYR A 37 ? ? -69.22 -71.19 4 1 THR A 47 ? ? -162.21 116.03 5 1 ALA A 50 ? ? -57.75 -4.05 6 1 PRO A 53 ? ? -63.58 78.41 7 1 ALA A 54 ? ? 52.76 -134.13 8 1 PHE A 58 ? ? -172.19 -31.58 9 1 SER A 65 ? ? -83.16 -139.44 10 1 ARG A 66 ? ? 162.20 95.61 11 1 LEU A 70 ? ? -58.04 -0.85 12 1 THR A 72 ? ? -48.74 -15.91 13 1 LEU A 88 ? ? -69.59 -79.28 14 1 VAL A 89 ? ? -48.11 -1.37 15 1 SER A 91 ? ? -79.79 29.06 16 1 ILE A 93 ? ? -31.21 -33.65 17 1 GLN A 95 ? ? -32.31 128.88 18 1 SER A 99 ? ? -2.70 -68.24 19 1 GLU A 102 ? ? -70.18 -82.06 20 1 GLN A 108 ? ? -66.46 -85.72 21 1 LEU A 135 ? ? -86.43 43.26 22 1 THR A 136 ? ? -60.67 95.18 23 1 PRO A 137 ? ? -29.36 -39.27 24 1 ILE A 145 ? ? -46.28 -76.03 25 1 ILE A 147 ? ? -38.18 -77.60 26 1 TYR A 164 ? ? -143.45 -7.84 27 1 ILE A 170 ? ? -40.06 -74.40 28 1 LEU A 172 ? ? -51.92 -80.63 29 1 PHE A 173 ? ? -23.27 -55.42 30 1 PRO A 189 ? ? -56.47 -81.12 31 1 GLU A 190 ? ? -74.31 29.66 32 1 LYS A 195 ? ? -39.61 -32.11 33 1 PRO A 205 ? ? -23.53 103.28 34 1 ALA A 211 ? ? -41.85 -75.10 35 1 TYR A 225 ? ? -11.15 -57.38 36 1 ALA A 226 ? ? -65.93 -156.78 37 1 CYS A 228 ? ? -141.09 -15.27 38 1 MET A 229 ? ? -79.55 43.81 39 1 ARG A 230 ? ? -44.40 -103.80 40 1 ARG A 231 ? ? 135.12 76.59 41 1 ARG A 232 ? ? -49.95 108.31 42 1 VAL A 234 ? ? 162.73 -147.25 43 1 VAL A 235 ? ? -155.33 -38.25 44 1 ASN A 236 ? ? 88.59 -162.74 45 1 TYR A 237 ? ? -136.70 -61.51 46 1 ALA A 238 ? ? 68.62 -174.80 47 1 LYS A 239 ? ? -175.13 -168.91 48 1 ARG A 240 ? ? 115.16 158.11 49 1 GLN A 242 ? ? -127.06 -95.68 50 1 ARG A 245 ? ? 82.37 -107.59 51 1 TYR A 247 ? ? -144.78 -76.66 52 1 ALA A 248 ? ? -20.53 134.64 53 1 GLN A 250 ? ? -151.11 -137.26 54 1 SER A 251 ? ? 173.36 -129.55 55 1 HIS A 253 ? ? -113.74 -147.03 56 1 LEU A 254 ? ? 175.54 -152.28 57 1 PRO A 255 ? ? -72.18 -77.45 58 1 LEU A 256 ? ? 169.82 -43.05 59 1 LYS A 257 ? ? 152.77 -153.96 60 1 VAL A 258 ? ? -170.52 121.04 61 1 VAL A 259 ? ? 105.90 179.91 62 1 TYR A 260 ? ? 104.42 -89.96 63 1 VAL A 261 ? ? 2.90 -75.71 64 1 SER A 262 ? ? -60.34 29.32 65 1 TYR A 284 ? ? -137.90 -69.81 66 1 MET A 286 ? ? -158.88 36.51 67 1 PRO A 289 ? ? -68.51 57.98 68 1 TYR A 294 ? ? -75.24 -90.36 69 1 GLU A 295 ? ? 66.64 126.01 70 1 ASP A 301 ? ? 173.64 152.94 71 1 TYR A 311 ? ? -57.25 -171.99 72 1 LEU A 313 ? ? -130.48 -67.33 73 1 SER A 318 ? ? -54.93 35.80 74 1 ASP A 319 ? ? -177.29 42.15 75 1 PRO A 320 ? ? -26.26 -67.11 76 1 MET A 336 ? ? -43.76 -87.31 77 1 GLU A 343 ? ? -37.52 -25.67 78 1 THR A 344 ? ? -96.46 -79.26 79 1 LEU A 347 ? ? -37.52 98.41 80 1 SER A 351 ? ? 133.43 -47.34 81 1 ALA A 353 ? ? -51.27 -72.69 82 1 ARG A 355 ? ? 122.08 -15.82 83 1 LYS A 357 ? ? -140.63 16.81 84 1 LYS A 358 ? ? -132.46 -41.52 85 1 SER A 359 ? ? -35.14 92.63 86 1 ALA A 361 ? ? -178.80 -82.90 87 1 PHE A 362 ? ? 81.06 -121.35 88 1 VAL A 363 ? ? 71.58 -163.33 89 1 ILE A 366 ? ? 101.58 -170.44 90 1 PRO A 368 ? ? -35.48 121.54 91 1 GLU A 370 ? ? 147.33 15.73 92 1 GLN A 371 ? ? -35.26 -31.35 93 1 THR A 372 ? ? 56.96 -119.10 94 1 ALA A 373 ? ? 115.55 120.58 95 1 LYS A 374 ? ? 112.55 1.77 96 1 TYR A 375 ? ? -176.24 2.99 97 1 ILE A 376 ? ? -113.79 67.43 98 1 HIS A 378 ? ? -39.50 -23.81 99 1 LEU A 380 ? ? -93.76 -66.97 100 1 ARG A 382 ? ? -75.75 -72.66 101 1 PRO A 385 ? ? -7.36 -76.23 102 1 LEU A 387 ? ? -2.44 -82.10 103 1 THR A 388 ? ? -44.32 -82.07 104 1 VAL A 389 ? ? -10.33 -148.11 105 1 MET A 390 ? ? -151.08 70.16 106 1 SER A 391 ? ? 174.04 -104.29 107 1 SER A 392 ? ? -38.20 -22.19 108 1 PHE A 394 ? ? -59.77 -88.37 109 1 LEU A 415 ? ? -47.07 -83.81 110 1 LEU A 416 ? ? -29.65 -56.82 111 1 LEU A 436 ? ? -125.54 -68.22 112 1 PRO A 438 ? ? -64.46 70.88 113 1 ALA A 439 ? ? -171.38 -60.48 114 1 ILE A 440 ? ? -60.96 56.04 115 1 LYS A 442 ? ? -149.18 -4.84 116 1 TRP B 23 ? ? -167.44 -64.38 117 1 PRO B 24 ? ? -6.21 -93.18 118 1 THR B 25 ? ? 12.73 -98.37 119 1 ARG B 26 ? ? -140.92 16.34 120 1 THR B 29 ? ? -171.69 134.40 121 1 LYS B 30 ? ? -61.37 42.56 122 1 ASP B 31 ? ? -171.96 -31.92 123 1 GLU B 32 ? ? -61.41 -86.49 124 1 TYR B 33 ? ? -29.04 -67.71 125 1 LEU B 34 ? ? -39.91 -38.24 126 1 HIS B 55 ? ? -65.89 -129.60 127 1 VAL B 56 ? ? 3.16 -79.75 128 1 PRO B 57 ? ? -5.64 -61.97 129 1 THR B 59 ? ? -24.24 -32.89 130 1 THR C 48 ? ? -96.81 -72.42 131 1 TYR C 49 ? ? -65.95 -179.44 132 1 ARG C 51 ? ? -31.62 135.33 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 CA ? A GLN 241 ? 'WRONG HAND' . 2 1 CA ? A GLN 250 ? 'WRONG HAND' . 3 1 CA ? A ALA 373 ? 'WRONG HAND' . # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 G E 500 ? ? 0.062 'SIDE CHAIN' 2 1 G G 1546 ? ? 0.061 'SIDE CHAIN' # _pdbx_entry_details.sequence_details ;THIS PDB FILE WAS OBTAINED UPON RIGID BODY REFINEMENT OF A STARTING PDB FILE INTO A CRYO-EM MAP. THE E. COLI RIBOSOMES ARE OBTAINED NATURALLY, BUT FOR THE MODELING OF THE PROTEINS INTO THE EM MAP, AUTHORS SOMETIMES DID NOT MODEL IN THE ENTIRE PROTEIN. ; _pdbx_entry_details.entry_id 3BO0 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 3BO0 _em_3d_fitting.ref_protocol 'RIGID BODY FIT' _em_3d_fitting.ref_space REAL _em_3d_fitting.overall_b_value ? _em_3d_fitting.target_criteria 'visual fit in O and Chimera' _em_3d_fitting.details ;REFINEMENT PROTOCOL--rigid body, followed by manual rebuilding and extension of the loops ; _em_3d_fitting.method ? # loop_ _em_3d_fitting_list.3d_fitting_id _em_3d_fitting_list.id _em_3d_fitting_list.pdb_entry_id _em_3d_fitting_list.pdb_chain_id _em_3d_fitting_list.details _em_3d_fitting_list.initial_refinement_model_id _em_3d_fitting_list.chain_id _em_3d_fitting_list.chain_residue_range _em_3d_fitting_list.pdb_chain_residue_range _em_3d_fitting_list.source_name _em_3d_fitting_list.type _em_3d_fitting_list.accession_code 1 1 1RHZ ? ? 1 ? ? ? PDB 'experimental model' 1RHZ 1 2 2I2T ? ? 2 ? ? ? PDB 'experimental model' 2I2T # _em_3d_reconstruction.entry_id 3BO0 _em_3d_reconstruction.id 1 _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.num_particles 39000 _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.method 'Projection matching in EMAN' _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size 2.73 _em_3d_reconstruction.resolution 9.6 _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution_method ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.algorithm ? # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name '50 mM HEPES- KOH pH 7.5, 100 mM KOAc, 10 mM Mg(OAc)2, 0.05% DDM' _em_buffer.pH 7.5 _em_buffer.details '50 mM HEPES- KOH pH 7.5, 100 mM KOAc, 10 mM Mg(OAc)2, 0.05% DDM' # _em_entity_assembly.id 1 _em_entity_assembly.name 'Ribosome-SecY complex' _em_entity_assembly.type RIBOSOME _em_entity_assembly.parent_id 0 _em_entity_assembly.synonym ? _em_entity_assembly.details 'in DDM' _em_entity_assembly.oligomeric_details ? # _em_imaging.entry_id 3BO0 _em_imaging.id 1 _em_imaging.microscope_model 'FEI TECNAI F20' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.specimen_id 1 _em_imaging.date ? _em_imaging.temperature 93 _em_imaging.nominal_defocus_min -700 _em_imaging.nominal_defocus_max -3000 _em_imaging.tilt_angle_min 0 _em_imaging.tilt_angle_max 0 _em_imaging.nominal_cs 2.0 _em_imaging.nominal_magnification 50000 _em_imaging.calibrated_magnification 51000 _em_imaging.accelerating_voltage 200 _em_imaging.details 'Gatan DH626 cold holder' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.citation_id ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details 'Solid carbon on a holey film, 400 mesh Cu grid' _em_sample_support.film_material ? _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type ? _em_sample_support.method ? # _em_vitrification.entry_id 3BO0 _em_vitrification.id 1 _em_vitrification.instrument 'HOMEMADE PLUNGER' _em_vitrification.cryogen_name ETHANE _em_vitrification.details 'The specimens were plunge frozen in liquid ethane at 4 degrees C at an RH of ~90-95%.' _em_vitrification.citation_id ? _em_vitrification.humidity ? _em_vitrification.method ? _em_vitrification.specimen_id 1 _em_vitrification.temp ? _em_vitrification.time_resolved_state ? _em_vitrification.chamber_temperature ? # _em_experiment.entry_id 3BO0 _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 3BO0 _em_single_particle_entity.id 1 _em_single_particle_entity.point_symmetry C1 _em_single_particle_entity.image_processing_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HIS N N N N 247 HIS CA C N S 248 HIS C C N N 249 HIS O O N N 250 HIS CB C N N 251 HIS CG C Y N 252 HIS ND1 N Y N 253 HIS CD2 C Y N 254 HIS CE1 C Y N 255 HIS NE2 N Y N 256 HIS OXT O N N 257 HIS H H N N 258 HIS H2 H N N 259 HIS HA H N N 260 HIS HB2 H N N 261 HIS HB3 H N N 262 HIS HD1 H N N 263 HIS HD2 H N N 264 HIS HE1 H N N 265 HIS HE2 H N N 266 HIS HXT H N N 267 ILE N N N N 268 ILE CA C N S 269 ILE C C N N 270 ILE O O N N 271 ILE CB C N S 272 ILE CG1 C N N 273 ILE CG2 C N N 274 ILE CD1 C N N 275 ILE OXT O N N 276 ILE H H N N 277 ILE H2 H N N 278 ILE HA H N N 279 ILE HB H N N 280 ILE HG12 H N N 281 ILE HG13 H N N 282 ILE HG21 H N N 283 ILE HG22 H N N 284 ILE HG23 H N N 285 ILE HD11 H N N 286 ILE HD12 H N N 287 ILE HD13 H N N 288 ILE HXT H N N 289 LEU N N N N 290 LEU CA C N S 291 LEU C C N N 292 LEU O O N N 293 LEU CB C N N 294 LEU CG C N N 295 LEU CD1 C N N 296 LEU CD2 C N N 297 LEU OXT O N N 298 LEU H H N N 299 LEU H2 H N N 300 LEU HA H N N 301 LEU HB2 H N N 302 LEU HB3 H N N 303 LEU HG H N N 304 LEU HD11 H N N 305 LEU HD12 H N N 306 LEU HD13 H N N 307 LEU HD21 H N N 308 LEU HD22 H N N 309 LEU HD23 H N N 310 LEU HXT H N N 311 LYS N N N N 312 LYS CA C N S 313 LYS C C N N 314 LYS O O N N 315 LYS CB C N N 316 LYS CG C N N 317 LYS CD C N N 318 LYS CE C N N 319 LYS NZ N N N 320 LYS OXT O N N 321 LYS H H N N 322 LYS H2 H N N 323 LYS HA H N N 324 LYS HB2 H N N 325 LYS HB3 H N N 326 LYS HG2 H N N 327 LYS HG3 H N N 328 LYS HD2 H N N 329 LYS HD3 H N N 330 LYS HE2 H N N 331 LYS HE3 H N N 332 LYS HZ1 H N N 333 LYS HZ2 H N N 334 LYS HZ3 H N N 335 LYS HXT H N N 336 MET N N N N 337 MET CA C N S 338 MET C C N N 339 MET O O N N 340 MET CB C N N 341 MET CG C N N 342 MET SD S N N 343 MET CE C N N 344 MET OXT O N N 345 MET H H N N 346 MET H2 H N N 347 MET HA H N N 348 MET HB2 H N N 349 MET HB3 H N N 350 MET HG2 H N N 351 MET HG3 H N N 352 MET HE1 H N N 353 MET HE2 H N N 354 MET HE3 H N N 355 MET HXT H N N 356 PHE N N N N 357 PHE CA C N S 358 PHE C C N N 359 PHE O O N N 360 PHE CB C N N 361 PHE CG C Y N 362 PHE CD1 C Y N 363 PHE CD2 C Y N 364 PHE CE1 C Y N 365 PHE CE2 C Y N 366 PHE CZ C Y N 367 PHE OXT O N N 368 PHE H H N N 369 PHE H2 H N N 370 PHE HA H N N 371 PHE HB2 H N N 372 PHE HB3 H N N 373 PHE HD1 H N N 374 PHE HD2 H N N 375 PHE HE1 H N N 376 PHE HE2 H N N 377 PHE HZ H N N 378 PHE HXT H N N 379 PRO N N N N 380 PRO CA C N S 381 PRO C C N N 382 PRO O O N N 383 PRO CB C N N 384 PRO CG C N N 385 PRO CD C N N 386 PRO OXT O N N 387 PRO H H N N 388 PRO HA H N N 389 PRO HB2 H N N 390 PRO HB3 H N N 391 PRO HG2 H N N 392 PRO HG3 H N N 393 PRO HD2 H N N 394 PRO HD3 H N N 395 PRO HXT H N N 396 SER N N N N 397 SER CA C N S 398 SER C C N N 399 SER O O N N 400 SER CB C N N 401 SER OG O N N 402 SER OXT O N N 403 SER H H N N 404 SER H2 H N N 405 SER HA H N N 406 SER HB2 H N N 407 SER HB3 H N N 408 SER HG H N N 409 SER HXT H N N 410 THR N N N N 411 THR CA C N S 412 THR C C N N 413 THR O O N N 414 THR CB C N R 415 THR OG1 O N N 416 THR CG2 C N N 417 THR OXT O N N 418 THR H H N N 419 THR H2 H N N 420 THR HA H N N 421 THR HB H N N 422 THR HG1 H N N 423 THR HG21 H N N 424 THR HG22 H N N 425 THR HG23 H N N 426 THR HXT H N N 427 TRP N N N N 428 TRP CA C N S 429 TRP C C N N 430 TRP O O N N 431 TRP CB C N N 432 TRP CG C Y N 433 TRP CD1 C Y N 434 TRP CD2 C Y N 435 TRP NE1 N Y N 436 TRP CE2 C Y N 437 TRP CE3 C Y N 438 TRP CZ2 C Y N 439 TRP CZ3 C Y N 440 TRP CH2 C Y N 441 TRP OXT O N N 442 TRP H H N N 443 TRP H2 H N N 444 TRP HA H N N 445 TRP HB2 H N N 446 TRP HB3 H N N 447 TRP HD1 H N N 448 TRP HE1 H N N 449 TRP HE3 H N N 450 TRP HZ2 H N N 451 TRP HZ3 H N N 452 TRP HH2 H N N 453 TRP HXT H N N 454 TYR N N N N 455 TYR CA C N S 456 TYR C C N N 457 TYR O O N N 458 TYR CB C N N 459 TYR CG C Y N 460 TYR CD1 C Y N 461 TYR CD2 C Y N 462 TYR CE1 C Y N 463 TYR CE2 C Y N 464 TYR CZ C Y N 465 TYR OH O N N 466 TYR OXT O N N 467 TYR H H N N 468 TYR H2 H N N 469 TYR HA H N N 470 TYR HB2 H N N 471 TYR HB3 H N N 472 TYR HD1 H N N 473 TYR HD2 H N N 474 TYR HE1 H N N 475 TYR HE2 H N N 476 TYR HH H N N 477 TYR HXT H N N 478 U OP3 O N N 479 U P P N N 480 U OP1 O N N 481 U OP2 O N N 482 U "O5'" O N N 483 U "C5'" C N N 484 U "C4'" C N R 485 U "O4'" O N N 486 U "C3'" C N S 487 U "O3'" O N N 488 U "C2'" C N R 489 U "O2'" O N N 490 U "C1'" C N R 491 U N1 N N N 492 U C2 C N N 493 U O2 O N N 494 U N3 N N N 495 U C4 C N N 496 U O4 O N N 497 U C5 C N N 498 U C6 C N N 499 U HOP3 H N N 500 U HOP2 H N N 501 U "H5'" H N N 502 U "H5''" H N N 503 U "H4'" H N N 504 U "H3'" H N N 505 U "HO3'" H N N 506 U "H2'" H N N 507 U "HO2'" H N N 508 U "H1'" H N N 509 U H3 H N N 510 U H5 H N N 511 U H6 H N N 512 VAL N N N N 513 VAL CA C N S 514 VAL C C N N 515 VAL O O N N 516 VAL CB C N N 517 VAL CG1 C N N 518 VAL CG2 C N N 519 VAL OXT O N N 520 VAL H H N N 521 VAL H2 H N N 522 VAL HA H N N 523 VAL HB H N N 524 VAL HG11 H N N 525 VAL HG12 H N N 526 VAL HG13 H N N 527 VAL HG21 H N N 528 VAL HG22 H N N 529 VAL HG23 H N N 530 VAL HXT H N N 531 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 HIS N CA sing N N 244 HIS N H sing N N 245 HIS N H2 sing N N 246 HIS CA C sing N N 247 HIS CA CB sing N N 248 HIS CA HA sing N N 249 HIS C O doub N N 250 HIS C OXT sing N N 251 HIS CB CG sing N N 252 HIS CB HB2 sing N N 253 HIS CB HB3 sing N N 254 HIS CG ND1 sing Y N 255 HIS CG CD2 doub Y N 256 HIS ND1 CE1 doub Y N 257 HIS ND1 HD1 sing N N 258 HIS CD2 NE2 sing Y N 259 HIS CD2 HD2 sing N N 260 HIS CE1 NE2 sing Y N 261 HIS CE1 HE1 sing N N 262 HIS NE2 HE2 sing N N 263 HIS OXT HXT sing N N 264 ILE N CA sing N N 265 ILE N H sing N N 266 ILE N H2 sing N N 267 ILE CA C sing N N 268 ILE CA CB sing N N 269 ILE CA HA sing N N 270 ILE C O doub N N 271 ILE C OXT sing N N 272 ILE CB CG1 sing N N 273 ILE CB CG2 sing N N 274 ILE CB HB sing N N 275 ILE CG1 CD1 sing N N 276 ILE CG1 HG12 sing N N 277 ILE CG1 HG13 sing N N 278 ILE CG2 HG21 sing N N 279 ILE CG2 HG22 sing N N 280 ILE CG2 HG23 sing N N 281 ILE CD1 HD11 sing N N 282 ILE CD1 HD12 sing N N 283 ILE CD1 HD13 sing N N 284 ILE OXT HXT sing N N 285 LEU N CA sing N N 286 LEU N H sing N N 287 LEU N H2 sing N N 288 LEU CA C sing N N 289 LEU CA CB sing N N 290 LEU CA HA sing N N 291 LEU C O doub N N 292 LEU C OXT sing N N 293 LEU CB CG sing N N 294 LEU CB HB2 sing N N 295 LEU CB HB3 sing N N 296 LEU CG CD1 sing N N 297 LEU CG CD2 sing N N 298 LEU CG HG sing N N 299 LEU CD1 HD11 sing N N 300 LEU CD1 HD12 sing N N 301 LEU CD1 HD13 sing N N 302 LEU CD2 HD21 sing N N 303 LEU CD2 HD22 sing N N 304 LEU CD2 HD23 sing N N 305 LEU OXT HXT sing N N 306 LYS N CA sing N N 307 LYS N H sing N N 308 LYS N H2 sing N N 309 LYS CA C sing N N 310 LYS CA CB sing N N 311 LYS CA HA sing N N 312 LYS C O doub N N 313 LYS C OXT sing N N 314 LYS CB CG sing N N 315 LYS CB HB2 sing N N 316 LYS CB HB3 sing N N 317 LYS CG CD sing N N 318 LYS CG HG2 sing N N 319 LYS CG HG3 sing N N 320 LYS CD CE sing N N 321 LYS CD HD2 sing N N 322 LYS CD HD3 sing N N 323 LYS CE NZ sing N N 324 LYS CE HE2 sing N N 325 LYS CE HE3 sing N N 326 LYS NZ HZ1 sing N N 327 LYS NZ HZ2 sing N N 328 LYS NZ HZ3 sing N N 329 LYS OXT HXT sing N N 330 MET N CA sing N N 331 MET N H sing N N 332 MET N H2 sing N N 333 MET CA C sing N N 334 MET CA CB sing N N 335 MET CA HA sing N N 336 MET C O doub N N 337 MET C OXT sing N N 338 MET CB CG sing N N 339 MET CB HB2 sing N N 340 MET CB HB3 sing N N 341 MET CG SD sing N N 342 MET CG HG2 sing N N 343 MET CG HG3 sing N N 344 MET SD CE sing N N 345 MET CE HE1 sing N N 346 MET CE HE2 sing N N 347 MET CE HE3 sing N N 348 MET OXT HXT sing N N 349 PHE N CA sing N N 350 PHE N H sing N N 351 PHE N H2 sing N N 352 PHE CA C sing N N 353 PHE CA CB sing N N 354 PHE CA HA sing N N 355 PHE C O doub N N 356 PHE C OXT sing N N 357 PHE CB CG sing N N 358 PHE CB HB2 sing N N 359 PHE CB HB3 sing N N 360 PHE CG CD1 doub Y N 361 PHE CG CD2 sing Y N 362 PHE CD1 CE1 sing Y N 363 PHE CD1 HD1 sing N N 364 PHE CD2 CE2 doub Y N 365 PHE CD2 HD2 sing N N 366 PHE CE1 CZ doub Y N 367 PHE CE1 HE1 sing N N 368 PHE CE2 CZ sing Y N 369 PHE CE2 HE2 sing N N 370 PHE CZ HZ sing N N 371 PHE OXT HXT sing N N 372 PRO N CA sing N N 373 PRO N CD sing N N 374 PRO N H sing N N 375 PRO CA C sing N N 376 PRO CA CB sing N N 377 PRO CA HA sing N N 378 PRO C O doub N N 379 PRO C OXT sing N N 380 PRO CB CG sing N N 381 PRO CB HB2 sing N N 382 PRO CB HB3 sing N N 383 PRO CG CD sing N N 384 PRO CG HG2 sing N N 385 PRO CG HG3 sing N N 386 PRO CD HD2 sing N N 387 PRO CD HD3 sing N N 388 PRO OXT HXT sing N N 389 SER N CA sing N N 390 SER N H sing N N 391 SER N H2 sing N N 392 SER CA C sing N N 393 SER CA CB sing N N 394 SER CA HA sing N N 395 SER C O doub N N 396 SER C OXT sing N N 397 SER CB OG sing N N 398 SER CB HB2 sing N N 399 SER CB HB3 sing N N 400 SER OG HG sing N N 401 SER OXT HXT sing N N 402 THR N CA sing N N 403 THR N H sing N N 404 THR N H2 sing N N 405 THR CA C sing N N 406 THR CA CB sing N N 407 THR CA HA sing N N 408 THR C O doub N N 409 THR C OXT sing N N 410 THR CB OG1 sing N N 411 THR CB CG2 sing N N 412 THR CB HB sing N N 413 THR OG1 HG1 sing N N 414 THR CG2 HG21 sing N N 415 THR CG2 HG22 sing N N 416 THR CG2 HG23 sing N N 417 THR OXT HXT sing N N 418 TRP N CA sing N N 419 TRP N H sing N N 420 TRP N H2 sing N N 421 TRP CA C sing N N 422 TRP CA CB sing N N 423 TRP CA HA sing N N 424 TRP C O doub N N 425 TRP C OXT sing N N 426 TRP CB CG sing N N 427 TRP CB HB2 sing N N 428 TRP CB HB3 sing N N 429 TRP CG CD1 doub Y N 430 TRP CG CD2 sing Y N 431 TRP CD1 NE1 sing Y N 432 TRP CD1 HD1 sing N N 433 TRP CD2 CE2 doub Y N 434 TRP CD2 CE3 sing Y N 435 TRP NE1 CE2 sing Y N 436 TRP NE1 HE1 sing N N 437 TRP CE2 CZ2 sing Y N 438 TRP CE3 CZ3 doub Y N 439 TRP CE3 HE3 sing N N 440 TRP CZ2 CH2 doub Y N 441 TRP CZ2 HZ2 sing N N 442 TRP CZ3 CH2 sing Y N 443 TRP CZ3 HZ3 sing N N 444 TRP CH2 HH2 sing N N 445 TRP OXT HXT sing N N 446 TYR N CA sing N N 447 TYR N H sing N N 448 TYR N H2 sing N N 449 TYR CA C sing N N 450 TYR CA CB sing N N 451 TYR CA HA sing N N 452 TYR C O doub N N 453 TYR C OXT sing N N 454 TYR CB CG sing N N 455 TYR CB HB2 sing N N 456 TYR CB HB3 sing N N 457 TYR CG CD1 doub Y N 458 TYR CG CD2 sing Y N 459 TYR CD1 CE1 sing Y N 460 TYR CD1 HD1 sing N N 461 TYR CD2 CE2 doub Y N 462 TYR CD2 HD2 sing N N 463 TYR CE1 CZ doub Y N 464 TYR CE1 HE1 sing N N 465 TYR CE2 CZ sing Y N 466 TYR CE2 HE2 sing N N 467 TYR CZ OH sing N N 468 TYR OH HH sing N N 469 TYR OXT HXT sing N N 470 U OP3 P sing N N 471 U OP3 HOP3 sing N N 472 U P OP1 doub N N 473 U P OP2 sing N N 474 U P "O5'" sing N N 475 U OP2 HOP2 sing N N 476 U "O5'" "C5'" sing N N 477 U "C5'" "C4'" sing N N 478 U "C5'" "H5'" sing N N 479 U "C5'" "H5''" sing N N 480 U "C4'" "O4'" sing N N 481 U "C4'" "C3'" sing N N 482 U "C4'" "H4'" sing N N 483 U "O4'" "C1'" sing N N 484 U "C3'" "O3'" sing N N 485 U "C3'" "C2'" sing N N 486 U "C3'" "H3'" sing N N 487 U "O3'" "HO3'" sing N N 488 U "C2'" "O2'" sing N N 489 U "C2'" "C1'" sing N N 490 U "C2'" "H2'" sing N N 491 U "O2'" "HO2'" sing N N 492 U "C1'" N1 sing N N 493 U "C1'" "H1'" sing N N 494 U N1 C2 sing N N 495 U N1 C6 sing N N 496 U C2 O2 doub N N 497 U C2 N3 sing N N 498 U N3 C4 sing N N 499 U N3 H3 sing N N 500 U C4 O4 doub N N 501 U C4 C5 sing N N 502 U C5 C6 doub N N 503 U C5 H5 sing N N 504 U C6 H6 sing N N 505 VAL N CA sing N N 506 VAL N H sing N N 507 VAL N H2 sing N N 508 VAL CA C sing N N 509 VAL CA CB sing N N 510 VAL CA HA sing N N 511 VAL C O doub N N 512 VAL C OXT sing N N 513 VAL CB CG1 sing N N 514 VAL CB CG2 sing N N 515 VAL CB HB sing N N 516 VAL CG1 HG11 sing N N 517 VAL CG1 HG12 sing N N 518 VAL CG1 HG13 sing N N 519 VAL CG2 HG21 sing N N 520 VAL CG2 HG22 sing N N 521 VAL CG2 HG23 sing N N 522 VAL OXT HXT sing N N 523 # _em_ctf_correction.id 1 _em_ctf_correction.details 'EMAN- phase flipping of particles form the same micrograph' _em_ctf_correction.type . # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.details ? _em_image_recording.id 1 _em_image_recording.avg_electron_dose_per_image 15 _em_image_recording.film_or_detector_model 'KODAK SO-163 FILM' _em_image_recording.imaging_id 1 _em_image_recording.detector_mode ? _em_image_recording.average_exposure_time ? _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.concentration ? _em_specimen.vitrification_applied YES _em_specimen.staining_applied NO _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.details ? # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3BO0 'double helix' 3BO0 'a-form double helix' 3BO0 'hairpin loop' 3BO0 'bulge loop' 3BO0 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 3 1_555 A C 27 1_555 0.035 -0.108 -0.185 -10.022 -6.136 -0.461 1 D_G81:C105_D D 81 ? D 105 ? 19 1 1 A U 4 1_555 A A 26 1_555 3.637 -0.238 0.679 -15.669 0.221 16.422 2 D_U82:A104_D D 82 ? D 104 ? ? ? 1 A A 5 1_555 A A 25 1_555 6.332 -4.597 0.641 0.279 -3.396 -15.851 3 D_A83:A103_D D 83 ? D 103 ? ? 10 1 A A 6 1_555 A G 20 1_555 3.027 7.077 -1.046 33.741 -5.677 170.702 4 D_A84:G98_D D 84 ? D 98 ? ? 12 1 A G 7 1_555 A C 19 1_555 -0.335 -0.206 0.329 -4.712 0.277 1.049 5 D_G85:C97_D D 85 ? D 97 ? 19 1 1 A G 8 1_555 A C 18 1_555 -0.254 -0.191 -0.107 -5.300 -0.995 -3.307 6 D_G86:C96_D D 86 ? D 96 ? 19 1 1 A U 9 1_555 A A 17 1_555 0.173 -0.134 0.014 7.344 3.236 -1.942 7 D_U87:A95_D D 87 ? D 95 ? 20 1 1 B A 2 1_555 B A 26 1_555 -1.347 1.134 -1.108 0.843 6.236 172.101 8 E_A479:A503_E E 479 ? E 503 ? 1 2 1 B A 6 1_555 B A 20 1_555 -6.276 -4.360 -0.093 -0.004 -1.197 -16.245 9 E_A483:A497_E E 483 ? E 497 ? ? 10 1 B C 7 1_555 B G 19 1_555 0.197 -0.211 -0.424 2.707 -2.991 -2.373 10 E_C484:G496_E E 484 ? E 496 ? 19 1 1 B C 8 1_555 B G 18 1_555 0.124 -0.101 -0.207 0.158 1.043 -0.399 11 E_C485:G495_E E 485 ? E 495 ? 19 1 1 B C 9 1_555 B G 17 1_555 0.164 -0.048 -0.232 2.229 -1.075 1.045 12 E_C486:G494_E E 486 ? E 494 ? 19 1 1 B C 10 1_555 B G 16 1_555 0.345 -0.125 -0.329 3.107 4.120 0.054 13 E_C487:G493_E E 487 ? E 493 ? 19 1 1 B G 11 1_555 B A 15 1_555 6.767 -5.111 0.733 19.232 2.990 0.607 14 E_G488:A492_E E 488 ? E 492 ? ? 10 1 C A 1 1_555 C U 18 1_555 -0.021 -0.193 -0.057 -0.689 1.987 3.235 15 F_A1385:U1402_F F 1385 ? F 1402 ? 20 1 1 C C 2 1_555 C G 17 1_555 0.298 -0.090 0.103 0.165 -3.715 0.698 16 F_C1386:G1401_F F 1386 ? F 1401 ? 19 1 1 C A 3 1_555 C U 16 1_555 0.162 -0.028 -0.021 0.574 -1.415 -5.186 17 F_A1387:U1400_F F 1387 ? F 1400 ? 20 1 1 C G 4 1_555 C C 15 1_555 -0.206 -0.157 0.038 -0.115 -2.275 -3.411 18 F_G1388:C1399_F F 1388 ? F 1399 ? 19 1 1 C G 5 1_555 C C 14 1_555 -0.109 -0.174 -0.046 -5.354 -2.710 -1.798 19 F_G1389:C1398_F F 1389 ? F 1398 ? 19 1 1 C U 6 1_555 C A 11 1_555 4.192 -1.967 -0.029 0.576 0.004 -96.938 20 F_U1390:A1395_F F 1390 ? F 1395 ? 24 4 1 D C 9 1_555 D G 29 1_555 0.067 -0.134 -0.233 -12.286 0.126 1.212 21 G_C1526:G1546_G G 1526 ? G 1546 ? 19 1 1 D G 10 1_555 D A 28 1_555 6.804 -3.896 0.069 1.316 -0.047 -1.662 22 G_G1527:A1545_G G 1527 ? G 1545 ? 11 9 1 D A 11 1_555 D G 26 1_555 -7.307 -5.118 0.648 -9.163 -18.614 -16.837 23 G_A1528:G1543_G G 1528 ? G 1543 ? ? ? 1 D G 12 1_555 D U 25 1_555 -2.180 -0.494 -0.016 -1.577 0.273 -1.783 24 G_G1529:U1542_G G 1529 ? G 1542 ? 28 ? 1 D G 13 1_555 D C 24 1_555 -0.323 -0.164 -0.064 2.789 -3.114 0.455 25 G_G1530:C1541_G G 1530 ? G 1541 ? 19 1 1 D C 14 1_555 D G 23 1_555 0.083 -0.163 -0.041 -1.361 -0.896 -2.396 26 G_C1531:G1540_G G 1531 ? G 1540 ? 19 1 1 D A 15 1_555 D U 22 1_555 0.069 -0.161 0.098 -2.451 -0.844 6.009 27 G_A1532:U1539_G G 1532 ? G 1539 ? 20 1 1 D C 16 1_555 D G 21 1_555 0.270 -0.165 -0.279 7.054 -1.372 -1.772 28 G_C1533:G1538_G G 1533 ? G 1538 ? 19 1 1 D C 19 1_555 D G 20 1_555 4.839 1.602 -0.636 -61.690 8.482 93.456 29 G_C1536:G1537_G G 1536 ? G 1537 ? ? 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 3 1_555 A C 27 1_555 A U 4 1_555 A A 26 1_555 1.323 -1.120 3.424 -1.623 2.495 44.534 -1.711 -1.895 3.312 3.288 2.139 44.628 1 DD_G81U82:A104C105_DD D 81 ? D 105 ? D 82 ? D 104 ? 1 A U 4 1_555 A A 26 1_555 A A 5 1_555 A A 25 1_555 -1.864 -0.379 2.802 7.904 6.171 47.038 -0.857 2.791 2.412 7.630 -9.773 48.036 2 DD_U82A83:A103A104_DD D 82 ? D 104 ? D 83 ? D 103 ? 1 A A 5 1_555 A A 25 1_555 A A 6 1_555 A G 20 1_555 -4.363 -3.529 4.194 2.101 24.151 -93.094 1.783 -2.895 4.874 -16.418 1.429 -95.491 3 DD_A83A84:G98A103_DD D 83 ? D 103 ? D 84 ? D 98 ? 1 A A 6 1_555 A G 20 1_555 A G 7 1_555 A C 19 1_555 -1.130 -4.059 3.466 97.156 -127.387 81.213 -0.649 1.636 4.193 -66.411 -50.651 165.006 4 DD_A84G85:C97G98_DD D 84 ? D 98 ? D 85 ? D 97 ? 1 A G 8 1_555 A C 18 1_555 A U 9 1_555 A A 17 1_555 -0.956 -2.503 2.935 -1.723 8.893 29.718 -6.039 1.524 2.164 16.852 3.264 31.038 5 DD_G86U87:A95C96_DD D 86 ? D 96 ? D 87 ? D 95 ? 1 B A 6 1_555 B A 20 1_555 B C 7 1_555 B G 19 1_555 1.015 -1.138 3.144 -1.652 6.511 65.816 -1.290 -0.993 3.010 5.976 1.517 66.120 6 EE_A483C484:G496A497_EE E 483 ? E 497 ? E 484 ? E 496 ? 1 B C 7 1_555 B G 19 1_555 B C 8 1_555 B G 18 1_555 -0.650 -2.362 3.245 -3.733 9.073 26.449 -6.737 0.559 2.387 19.017 7.825 28.180 7 EE_C484C485:G495G496_EE E 484 ? E 496 ? E 485 ? E 495 ? 1 B C 8 1_555 B G 18 1_555 B C 9 1_555 B G 17 1_555 0.226 -2.114 3.126 -0.759 7.485 32.687 -4.755 -0.503 2.586 13.085 1.326 33.519 8 EE_C485C486:G494G495_EE E 485 ? E 495 ? E 486 ? E 494 ? 1 B C 9 1_555 B G 17 1_555 B C 10 1_555 B G 16 1_555 -1.075 -2.001 3.466 0.167 7.081 24.342 -6.558 2.499 2.774 16.355 -0.385 25.337 9 EE_C486C487:G493G494_EE E 486 ? E 494 ? E 487 ? E 493 ? 1 B C 10 1_555 B G 16 1_555 B G 11 1_555 B A 15 1_555 -0.585 -0.406 2.916 -0.745 13.220 54.591 -1.098 0.585 2.765 14.181 0.799 56.054 10 EE_C487G488:A492G493_EE E 487 ? E 493 ? E 488 ? E 492 ? 1 C A 1 1_555 C U 18 1_555 C C 2 1_555 C G 17 1_555 -0.858 -0.885 3.361 -2.817 -4.395 31.728 -0.766 1.016 3.509 -7.972 5.109 32.143 11 FF_A1385C1386:G1401U1402_FF F 1385 ? F 1402 ? F 1386 ? F 1401 ? 1 C C 2 1_555 C G 17 1_555 C A 3 1_555 C U 16 1_555 -0.437 -1.154 2.846 1.251 19.028 35.146 -3.427 0.755 1.975 29.025 -1.908 39.842 12 FF_C1386A1387:U1400G1401_FF F 1386 ? F 1401 ? F 1387 ? F 1400 ? 1 C A 3 1_555 C U 16 1_555 C G 4 1_555 C C 15 1_555 0.084 -1.945 3.087 -2.020 7.347 28.528 -5.180 -0.539 2.506 14.584 4.010 29.507 13 FF_A1387G1388:C1399U1400_FF F 1387 ? F 1400 ? F 1388 ? F 1399 ? 1 C G 4 1_555 C C 15 1_555 C G 5 1_555 C C 14 1_555 0.670 -1.966 3.251 0.433 5.070 38.646 -3.535 -0.954 2.986 7.620 -0.650 38.967 14 FF_G1388G1389:C1398C1399_FF F 1388 ? F 1399 ? F 1389 ? F 1398 ? 1 C G 5 1_555 C C 14 1_555 C U 6 1_555 C A 11 1_555 -2.193 -2.096 3.221 0.445 -0.915 81.461 -1.583 1.692 3.231 -0.701 -0.341 81.466 15 FF_G1389U1390:A1395C1398_FF F 1389 ? F 1398 ? F 1390 ? F 1395 ? 1 D C 9 1_555 D G 29 1_555 D G 10 1_555 D A 28 1_555 -0.533 -0.392 2.973 -2.026 3.071 54.100 -0.601 0.473 2.965 3.372 2.225 54.215 16 GG_C1526G1527:A1545G1546_GG G 1526 ? G 1546 ? G 1527 ? G 1545 ? 1 D G 10 1_555 D A 28 1_555 D A 11 1_555 D G 26 1_555 1.564 -0.046 5.423 -2.412 17.446 3.506 -16.362 -7.255 0.808 78.087 10.798 17.955 17 GG_G1527A1528:G1543A1545_GG G 1527 ? G 1545 ? G 1528 ? G 1543 ? 1 D A 11 1_555 D G 26 1_555 D G 12 1_555 D U 25 1_555 2.244 -0.717 3.278 -3.233 10.775 53.747 -1.401 -2.624 2.966 11.773 3.532 54.825 18 GG_A1528G1529:U1542G1543_GG G 1528 ? G 1543 ? G 1529 ? G 1542 ? 1 D G 12 1_555 D U 25 1_555 D G 13 1_555 D C 24 1_555 0.015 -1.600 3.239 -0.822 1.914 31.949 -3.239 -0.172 3.139 3.473 1.491 32.015 19 GG_G1529G1530:C1541U1542_GG G 1529 ? G 1542 ? G 1530 ? G 1541 ? 1 D G 13 1_555 D C 24 1_555 D C 14 1_555 D G 23 1_555 0.094 -1.191 3.432 1.710 -1.989 46.222 -1.336 0.034 3.479 -2.531 -2.176 46.293 20 GG_G1530C1531:G1540C1541_GG G 1530 ? G 1541 ? G 1531 ? G 1540 ? 1 D C 14 1_555 D G 23 1_555 D A 15 1_555 D U 22 1_555 1.592 -2.952 3.138 5.122 18.467 31.684 -6.574 -1.984 1.483 30.579 -8.482 36.901 21 GG_C1531A1532:U1539G1540_GG G 1531 ? G 1540 ? G 1532 ? G 1539 ? 1 D A 15 1_555 D U 22 1_555 D C 16 1_555 D G 21 1_555 -0.719 -1.432 3.098 2.420 -0.046 29.175 -2.825 1.915 3.032 -0.091 -4.794 29.273 22 GG_A1532C1533:G1538U1539_GG G 1532 ? G 1539 ? G 1533 ? G 1538 ? 1 D C 16 1_555 D G 21 1_555 D C 19 1_555 D G 20 1_555 -4.151 2.703 -0.483 101.380 97.802 94.135 1.600 1.912 -1.095 52.359 -54.274 153.627 23 GG_C1533C1536:G1537G1538_GG G 1533 ? G 1538 ? G 1536 ? G 1537 ? # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code 1 'experimental model' PDB 1RHZ 2 'experimental model' PDB 2I2T # _atom_sites.entry_id 3BO0 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_