HEADER OXIDOREDUCTASE 18-DEC-07 3BPK TITLE CRYSTAL STRUCTURE OF NITRILOTRIACETATE MONOOXYGENASE COMPONENT B FROM TITLE 2 BACILLUS CEREUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: NITRILOTRIACETATE MONOOXYGENASE COMPONENT B; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.14.13.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS CEREUS ATCC 14579; SOURCE 3 ORGANISM_TAXID: 226900; SOURCE 4 STRAIN: DSM 31; SOURCE 5 ATCC: 14579; SOURCE 6 GENE: BC_5322; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, APC25244, NITRILOTRIACETATE MONOOXYGENASE, PSI- KEYWDS 2 2, PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, MCSG, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR J.OSIPIUK,P.QUARTEY,J.ABDULLAH,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 3 25-OCT-17 3BPK 1 REMARK REVDAT 2 24-FEB-09 3BPK 1 VERSN REVDAT 1 01-JAN-08 3BPK 0 JRNL AUTH J.OSIPIUK,P.QUARTEY,J.ABDULLAH,A.JOACHIMIAK JRNL TITL X-RAY CRYSTAL STRUCTURE OF NITRILOTRIACETATE MONOOXYGENASE JRNL TITL 2 COMPONENT B FROM BACILLUS CEREUS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.56 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.56 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 72462 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.155 REMARK 3 R VALUE (WORKING SET) : 0.153 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3658 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.56 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.60 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4892 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.46 REMARK 3 BIN R VALUE (WORKING SET) : 0.2190 REMARK 3 BIN FREE R VALUE SET COUNT : 260 REMARK 3 BIN FREE R VALUE : 0.2970 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3056 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 9 REMARK 3 SOLVENT ATOMS : 511 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.27000 REMARK 3 B22 (A**2) : 0.27000 REMARK 3 B33 (A**2) : -0.40000 REMARK 3 B12 (A**2) : 0.13000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.086 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.072 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.044 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.642 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.964 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3602 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4981 ; 1.409 ; 1.984 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 522 ; 5.521 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 174 ;37.283 ;25.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 681 ;14.146 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 25 ;15.274 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 570 ; 0.103 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2805 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1757 ; 0.213 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2453 ; 0.310 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 459 ; 0.195 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 50 ; 0.249 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 35 ; 0.219 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2290 ; 1.415 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3677 ; 2.108 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1433 ; 4.230 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1240 ; 4.644 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3723 ; 4.088 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 526 ; 6.281 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 3477 ; 4.364 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3BPK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-DEC-07. REMARK 100 THE DEPOSITION ID IS D_1000045807. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-OCT-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 72506 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.560 REMARK 200 RESOLUTION RANGE LOW (A) : 39.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 11.40 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.56 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.51200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.260 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, MLPHARE, DM, SOLVE, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 M AMMONIUM SULFATE, 0.1 M CACODYLATE REMARK 280 BUFFER, 0.2 M SODIUM CHLORIDE, PH 6.5, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 98.59600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 197.19200 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 147.89400 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 246.49000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 49.29800 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 98.59600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 197.19200 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 246.49000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 147.89400 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 49.29800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE DIMERIC ASSEMBLY OF THE BIOLOGICAL REMARK 300 UNIT THAT IS SHOWN IN REMARK 350 IS PUTATIVE AT THE TIME OF REMARK 300 DEPOSITION. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8020 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 LEU A 101 REMARK 465 PRO A 102 REMARK 465 PRO A 103 REMARK 465 ASN A 104 REMARK 465 VAL A 200 REMARK 465 ARG A 201 REMARK 465 PRO A 202 REMARK 465 ILE A 203 REMARK 465 VAL B 200 REMARK 465 ARG B 201 REMARK 465 PRO B 202 REMARK 465 ILE B 203 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 623 O HOH B 823 1.75 REMARK 500 O HOH A 829 O HOH B 638 1.75 REMARK 500 O HOH A 623 O HOH A 808 1.89 REMARK 500 O HOH B 822 O HOH B 853 1.98 REMARK 500 O HOH B 623 O HOH B 832 2.13 REMARK 500 O ALA B 98 O HOH B 830 2.16 REMARK 500 OH TYR B 44 O HOH B 860 2.16 REMARK 500 O HOH B 633 O HOH B 841 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O ASN B -1 O HOH A 814 6545 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 185 -145.25 -110.37 REMARK 500 HIS A 188 30.24 -97.45 REMARK 500 ASN B -1 45.91 -145.25 REMARK 500 TYR B 90 14.14 -141.61 REMARK 500 GLU B 147 3.65 -66.48 REMARK 500 LEU B 185 -148.35 -114.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 605 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC25244 RELATED DB: TARGETDB DBREF 3BPK A 1 203 UNP Q814U7 Q814U7_BACCR 1 203 DBREF 3BPK B 1 203 UNP Q814U7 Q814U7_BACCR 1 203 SEQADV 3BPK SER A -2 UNP Q814U7 EXPRESSION TAG SEQADV 3BPK ASN A -1 UNP Q814U7 EXPRESSION TAG SEQADV 3BPK ALA A 0 UNP Q814U7 EXPRESSION TAG SEQADV 3BPK SER B -2 UNP Q814U7 EXPRESSION TAG SEQADV 3BPK ASN B -1 UNP Q814U7 EXPRESSION TAG SEQADV 3BPK ALA B 0 UNP Q814U7 EXPRESSION TAG SEQRES 1 A 206 SER ASN ALA MSE LEU SER ILE ASN PRO ASN GLU GLN THR SEQRES 2 A 206 GLU LYS ASP ASN TYR LYS LEU LEU THR GLY SER ILE ILE SEQRES 3 A 206 PRO ARG PRO VAL ALA PHE VAL THR SER VAL THR LYS GLU SEQRES 4 A 206 GLY VAL LEU ASN GLY ALA PRO TYR SER TYR PHE ASN ILE SEQRES 5 A 206 VAL ALA ALA ASN PRO PRO LEU ILE SER VAL SER VAL GLN SEQRES 6 A 206 ARG LYS ALA GLY GLU ARG LYS ASP THR SER ARG ASN ALA SEQRES 7 A 206 ILE GLU LYS GLY GLU PHE VAL VAL HIS ILE SER ASP GLU SEQRES 8 A 206 SER TYR VAL ALA ALA ILE ASN GLU THR ALA ALA ASN LEU SEQRES 9 A 206 PRO PRO ASN GLU SER GLU ILE GLU LEU ALA LYS LEU THR SEQRES 10 A 206 PRO ILE GLU SER GLU VAL ILE SER VAL PRO GLY VAL LYS SEQRES 11 A 206 GLU ALA ASN ILE ARG MSE GLU CYS VAL LEU GLU ARG ALA SEQRES 12 A 206 ILE PRO LEU GLY GLY THR GLU ASP SER PRO ALA CYS ASP SEQRES 13 A 206 LEU LEU ILE GLY ARG VAL VAL ARG PHE HIS VAL ALA GLU SEQRES 14 A 206 HIS LEU TYR GLU LYS GLY ARG ILE HIS ALA GLU GLY LEU SEQRES 15 A 206 LYS PRO ILE SER ARG LEU ALA GLY HIS ASN TYR ALA LYS SEQRES 16 A 206 LEU GLY GLU GLN PHE GLU LEU VAL ARG PRO ILE SEQRES 1 B 206 SER ASN ALA MSE LEU SER ILE ASN PRO ASN GLU GLN THR SEQRES 2 B 206 GLU LYS ASP ASN TYR LYS LEU LEU THR GLY SER ILE ILE SEQRES 3 B 206 PRO ARG PRO VAL ALA PHE VAL THR SER VAL THR LYS GLU SEQRES 4 B 206 GLY VAL LEU ASN GLY ALA PRO TYR SER TYR PHE ASN ILE SEQRES 5 B 206 VAL ALA ALA ASN PRO PRO LEU ILE SER VAL SER VAL GLN SEQRES 6 B 206 ARG LYS ALA GLY GLU ARG LYS ASP THR SER ARG ASN ALA SEQRES 7 B 206 ILE GLU LYS GLY GLU PHE VAL VAL HIS ILE SER ASP GLU SEQRES 8 B 206 SER TYR VAL ALA ALA ILE ASN GLU THR ALA ALA ASN LEU SEQRES 9 B 206 PRO PRO ASN GLU SER GLU ILE GLU LEU ALA LYS LEU THR SEQRES 10 B 206 PRO ILE GLU SER GLU VAL ILE SER VAL PRO GLY VAL LYS SEQRES 11 B 206 GLU ALA ASN ILE ARG MSE GLU CYS VAL LEU GLU ARG ALA SEQRES 12 B 206 ILE PRO LEU GLY GLY THR GLU ASP SER PRO ALA CYS ASP SEQRES 13 B 206 LEU LEU ILE GLY ARG VAL VAL ARG PHE HIS VAL ALA GLU SEQRES 14 B 206 HIS LEU TYR GLU LYS GLY ARG ILE HIS ALA GLU GLY LEU SEQRES 15 B 206 LYS PRO ILE SER ARG LEU ALA GLY HIS ASN TYR ALA LYS SEQRES 16 B 206 LEU GLY GLU GLN PHE GLU LEU VAL ARG PRO ILE MODRES 3BPK MSE A 1 MET SELENOMETHIONINE MODRES 3BPK MSE A 133 MET SELENOMETHIONINE MODRES 3BPK MSE B 1 MET SELENOMETHIONINE MODRES 3BPK MSE B 133 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 133 8 HET MSE B 1 8 HET MSE B 133 8 HET CL A 604 1 HET CL A 605 1 HET SO4 B 601 5 HET CL B 602 1 HET CL B 603 1 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 CL 4(CL 1-) FORMUL 5 SO4 O4 S 2- FORMUL 8 HOH *511(H2 O) HELIX 1 1 THR A 10 ILE A 22 1 13 HELIX 2 2 LYS A 69 GLY A 79 1 11 HELIX 3 3 TYR A 90 THR A 97 1 8 HELIX 4 4 SER A 106 ALA A 111 1 6 HELIX 5 5 HIS A 175 LYS A 180 1 6 HELIX 6 6 ASN B 5 GLN B 9 5 5 HELIX 7 7 THR B 10 ILE B 22 1 13 HELIX 8 8 LYS B 69 GLY B 79 1 11 HELIX 9 9 TYR B 90 ALA B 98 1 9 HELIX 10 10 SER B 106 ALA B 111 1 6 HELIX 11 11 HIS B 175 LYS B 180 1 6 SHEET 1 A 6 MSE A 1 ILE A 4 0 SHEET 2 A 6 CYS B 152 ALA B 165 -1 O VAL B 164 N LEU A 2 SHEET 3 A 6 ILE B 131 LEU B 143 -1 N GLU B 134 O VAL B 160 SHEET 4 A 6 GLU B 80 ILE B 85 -1 N PHE B 81 O CYS B 135 SHEET 5 A 6 ALA B 28 VAL B 33 -1 N PHE B 29 O HIS B 84 SHEET 6 A 6 LEU B 39 TYR B 44 -1 O TYR B 44 N ALA B 28 SHEET 1 B 4 MSE A 1 ILE A 4 0 SHEET 2 B 4 CYS B 152 ALA B 165 -1 O VAL B 164 N LEU A 2 SHEET 3 B 4 LEU B 56 GLN B 62 -1 N VAL B 59 O LEU B 155 SHEET 4 B 4 PHE B 47 ALA B 51 -1 N VAL B 50 O LEU B 56 SHEET 1 C 4 ARG A 25 PRO A 26 0 SHEET 2 C 4 SER A 183 ARG A 184 -1 O ARG A 184 N ARG A 25 SHEET 3 C 4 ASN A 189 ALA A 191 -1 O ALA A 191 N SER A 183 SHEET 4 C 4 GLN B 196 GLU B 198 -1 O PHE B 197 N TYR A 190 SHEET 1 D 7 LEU A 39 TYR A 44 0 SHEET 2 D 7 ALA A 28 VAL A 33 -1 N SER A 32 O ASN A 40 SHEET 3 D 7 GLU A 80 ILE A 85 -1 O HIS A 84 N PHE A 29 SHEET 4 D 7 ILE A 131 LEU A 143 -1 O CYS A 135 N PHE A 81 SHEET 5 D 7 CYS A 152 ALA A 165 -1 O VAL A 160 N GLU A 134 SHEET 6 D 7 LEU A 56 GLN A 62 -1 N VAL A 59 O LEU A 155 SHEET 7 D 7 PHE A 47 ALA A 51 -1 N VAL A 50 O LEU A 56 SHEET 1 E 6 LEU A 39 TYR A 44 0 SHEET 2 E 6 ALA A 28 VAL A 33 -1 N SER A 32 O ASN A 40 SHEET 3 E 6 GLU A 80 ILE A 85 -1 O HIS A 84 N PHE A 29 SHEET 4 E 6 ILE A 131 LEU A 143 -1 O CYS A 135 N PHE A 81 SHEET 5 E 6 CYS A 152 ALA A 165 -1 O VAL A 160 N GLU A 134 SHEET 6 E 6 MSE B 1 ILE B 4 -1 O LEU B 2 N VAL A 164 SHEET 1 F 2 PRO A 115 ILE A 116 0 SHEET 2 F 2 GLY A 125 VAL A 126 -1 O GLY A 125 N ILE A 116 SHEET 1 G 2 TYR A 169 GLU A 170 0 SHEET 2 G 2 ARG A 173 ILE A 174 -1 O ARG A 173 N GLU A 170 SHEET 1 H 4 GLN A 196 GLU A 198 0 SHEET 2 H 4 ASN B 189 ALA B 191 -1 O TYR B 190 N PHE A 197 SHEET 3 H 4 SER B 183 ARG B 184 -1 N SER B 183 O ALA B 191 SHEET 4 H 4 ARG B 25 PRO B 26 -1 N ARG B 25 O ARG B 184 SHEET 1 I 2 PRO B 115 ILE B 116 0 SHEET 2 I 2 GLY B 125 VAL B 126 -1 O GLY B 125 N ILE B 116 SHEET 1 J 2 TYR B 169 GLU B 170 0 SHEET 2 J 2 ARG B 173 ILE B 174 -1 O ARG B 173 N GLU B 170 LINK C ALA A 0 N MSE A 1 1555 1555 1.35 LINK C MSE A 1 N LEU A 2 1555 1555 1.33 LINK C ARG A 132 N MSE A 133 1555 1555 1.33 LINK C MSE A 133 N GLU A 134 1555 1555 1.34 LINK C ALA B 0 N MSE B 1 1555 1555 1.33 LINK C MSE B 1 N LEU B 2 1555 1555 1.33 LINK C ARG B 132 N MSE B 133 1555 1555 1.33 LINK C MSE B 133 N GLU B 134 1555 1555 1.33 CISPEP 1 ILE A 23 PRO A 24 0 -6.32 CISPEP 2 ASN A 53 PRO A 54 0 -12.11 CISPEP 3 ILE B 23 PRO B 24 0 -7.01 CISPEP 4 ASN B 53 PRO B 54 0 -10.11 SITE 1 AC1 6 THR B 10 GLU B 11 HOH B 767 HOH B 821 SITE 2 AC1 6 HOH B 865 HOH B 868 SITE 1 AC2 4 TYR B 44 GLN B 62 LYS B 69 HOH B 698 SITE 1 AC3 2 HOH A 634 LEU B 39 SITE 1 AC4 5 GLU A 117 SER A 118 SER A 122 VAL A 123 SITE 2 AC4 5 PRO A 124 SITE 1 AC5 3 TYR A 44 GLN A 62 LYS A 69 CRYST1 76.807 76.807 295.788 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013020 0.007517 0.000000 0.00000 SCALE2 0.000000 0.015034 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003381 0.00000