data_3BPQ # _entry.id 3BPQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3BPQ pdb_00003bpq 10.2210/pdb3bpq/pdb RCSB RCSB045813 ? ? WWPDB D_1000045813 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-12-23 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-08-24 4 'Structure model' 1 3 2011-08-31 5 'Structure model' 1 4 2017-10-25 6 'Structure model' 1 5 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Source and taxonomy' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Structure summary' 7 5 'Structure model' 'Refinement description' 8 6 'Structure model' 'Data collection' 9 6 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' software 2 6 'Structure model' chem_comp_atom 3 6 'Structure model' chem_comp_bond 4 6 'Structure model' database_2 5 6 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_software.name' 2 6 'Structure model' '_database_2.pdbx_DOI' 3 6 'Structure model' '_database_2.pdbx_database_accession' 4 6 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3BPQ _pdbx_database_status.recvd_initial_deposition_date 2007-12-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Francuski, D.' 1 'Saenger, W.' 2 # _citation.id primary _citation.title 'Crystal structure of the antitoxin-toxin protein complex RelB-RelE from Methanococcus jannaschii' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 393 _citation.page_first 898 _citation.page_last 908 _citation.year 2009 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19712680 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2009.08.048 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Francuski, D.' 1 ? primary 'Saenger, W.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Antitoxin RelB3' 6323.375 2 ? ? ? ? 2 polymer man 'Toxin RelE3' 10515.409 2 3.1.-.- R62S ? ? 3 water nat water 18.015 56 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 RelB 2 'Uncharacterized protein MJ1103, MjRelE, Putative endoribonuclease RelE' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no MRLKKRFKKFFISRKEYEKIEEILDIGLAKAMEETKDDELLTYDEIKELLGD MRLKKRFKKFFISRKEYEKIEEILDIGLAKAMEETKDDELLTYDEIKELLGD A,C ? 2 'polypeptide(L)' no no ;MKVLFAKTFVKDLKHVPGHIRKRIKLIIEECQNSNSLNDLKLDIKKIKGYHNYYRIRVGNYSIGIEVNGDTIIFRRVLHR KSIYDYFP ; ;MKVLFAKTFVKDLKHVPGHIRKRIKLIIEECQNSNSLNDLKLDIKKIKGYHNYYRIRVGNYSIGIEVNGDTIIFRRVLHR KSIYDYFP ; B,D ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ARG n 1 3 LEU n 1 4 LYS n 1 5 LYS n 1 6 ARG n 1 7 PHE n 1 8 LYS n 1 9 LYS n 1 10 PHE n 1 11 PHE n 1 12 ILE n 1 13 SER n 1 14 ARG n 1 15 LYS n 1 16 GLU n 1 17 TYR n 1 18 GLU n 1 19 LYS n 1 20 ILE n 1 21 GLU n 1 22 GLU n 1 23 ILE n 1 24 LEU n 1 25 ASP n 1 26 ILE n 1 27 GLY n 1 28 LEU n 1 29 ALA n 1 30 LYS n 1 31 ALA n 1 32 MET n 1 33 GLU n 1 34 GLU n 1 35 THR n 1 36 LYS n 1 37 ASP n 1 38 ASP n 1 39 GLU n 1 40 LEU n 1 41 LEU n 1 42 THR n 1 43 TYR n 1 44 ASP n 1 45 GLU n 1 46 ILE n 1 47 LYS n 1 48 GLU n 1 49 LEU n 1 50 LEU n 1 51 GLY n 1 52 ASP n 2 1 MET n 2 2 LYS n 2 3 VAL n 2 4 LEU n 2 5 PHE n 2 6 ALA n 2 7 LYS n 2 8 THR n 2 9 PHE n 2 10 VAL n 2 11 LYS n 2 12 ASP n 2 13 LEU n 2 14 LYS n 2 15 HIS n 2 16 VAL n 2 17 PRO n 2 18 GLY n 2 19 HIS n 2 20 ILE n 2 21 ARG n 2 22 LYS n 2 23 ARG n 2 24 ILE n 2 25 LYS n 2 26 LEU n 2 27 ILE n 2 28 ILE n 2 29 GLU n 2 30 GLU n 2 31 CYS n 2 32 GLN n 2 33 ASN n 2 34 SER n 2 35 ASN n 2 36 SER n 2 37 LEU n 2 38 ASN n 2 39 ASP n 2 40 LEU n 2 41 LYS n 2 42 LEU n 2 43 ASP n 2 44 ILE n 2 45 LYS n 2 46 LYS n 2 47 ILE n 2 48 LYS n 2 49 GLY n 2 50 TYR n 2 51 HIS n 2 52 ASN n 2 53 TYR n 2 54 TYR n 2 55 ARG n 2 56 ILE n 2 57 ARG n 2 58 VAL n 2 59 GLY n 2 60 ASN n 2 61 TYR n 2 62 SER n 2 63 ILE n 2 64 GLY n 2 65 ILE n 2 66 GLU n 2 67 VAL n 2 68 ASN n 2 69 GLY n 2 70 ASP n 2 71 THR n 2 72 ILE n 2 73 ILE n 2 74 PHE n 2 75 ARG n 2 76 ARG n 2 77 VAL n 2 78 LEU n 2 79 HIS n 2 80 ARG n 2 81 LYS n 2 82 SER n 2 83 ILE n 2 84 TYR n 2 85 ASP n 2 86 TYR n 2 87 PHE n 2 88 PRO n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? ? ? 'relB3, relB, MJ1103.1' ? DSM2661 ? ? ? ? 'Methanocaldococcus jannaschii' 243232 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? K-12 ? ? ? ? ? ? ? PLASMID ? ? ? pET21 ? ? 2 1 sample ? ? ? ? ? 'MJ1103, relE, relE3' ? DSM2661 ? ? ? ? 'Methanocaldococcus jannaschii' 243232 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? K-12 ? ? ? ? ? ? ? PLASMID ? ? ? pET21 ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ARG 2 2 ? ? ? A . n A 1 3 LEU 3 3 ? ? ? A . n A 1 4 LYS 4 4 ? ? ? A . n A 1 5 LYS 5 5 ? ? ? A . n A 1 6 ARG 6 6 ? ? ? A . n A 1 7 PHE 7 7 ? ? ? A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 PHE 10 10 10 PHE PHE A . n A 1 11 PHE 11 11 11 PHE PHE A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 SER 13 13 13 SER SER A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 TYR 17 17 17 TYR TYR A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 ILE 20 20 20 ILE ILE A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 MET 32 32 32 MET MET A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 THR 42 42 42 THR THR A . n A 1 43 TYR 43 43 43 TYR TYR A . n A 1 44 ASP 44 44 44 ASP ASP A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 LEU 49 49 ? ? ? A . n A 1 50 LEU 50 50 ? ? ? A . n A 1 51 GLY 51 51 ? ? ? A . n A 1 52 ASP 52 52 ? ? ? A . n B 2 1 MET 1 1 ? ? ? B . n B 2 2 LYS 2 2 ? ? ? B . n B 2 3 VAL 3 3 3 VAL VAL B . n B 2 4 LEU 4 4 4 LEU LEU B . n B 2 5 PHE 5 5 5 PHE PHE B . n B 2 6 ALA 6 6 6 ALA ALA B . n B 2 7 LYS 7 7 7 LYS LYS B . n B 2 8 THR 8 8 8 THR THR B . n B 2 9 PHE 9 9 9 PHE PHE B . n B 2 10 VAL 10 10 10 VAL VAL B . n B 2 11 LYS 11 11 11 LYS LYS B . n B 2 12 ASP 12 12 12 ASP ASP B . n B 2 13 LEU 13 13 13 LEU LEU B . n B 2 14 LYS 14 14 14 LYS LYS B . n B 2 15 HIS 15 15 15 HIS HIS B . n B 2 16 VAL 16 16 16 VAL VAL B . n B 2 17 PRO 17 17 17 PRO PRO B . n B 2 18 GLY 18 18 18 GLY GLY B . n B 2 19 HIS 19 19 19 HIS HIS B . n B 2 20 ILE 20 20 20 ILE ILE B . n B 2 21 ARG 21 21 21 ARG ARG B . n B 2 22 LYS 22 22 22 LYS LYS B . n B 2 23 ARG 23 23 23 ARG ARG B . n B 2 24 ILE 24 24 24 ILE ILE B . n B 2 25 LYS 25 25 25 LYS LYS B . n B 2 26 LEU 26 26 26 LEU LEU B . n B 2 27 ILE 27 27 27 ILE ILE B . n B 2 28 ILE 28 28 28 ILE ILE B . n B 2 29 GLU 29 29 29 GLU GLU B . n B 2 30 GLU 30 30 30 GLU GLU B . n B 2 31 CYS 31 31 31 CYS CYS B . n B 2 32 GLN 32 32 32 GLN GLN B . n B 2 33 ASN 33 33 33 ASN ASN B . n B 2 34 SER 34 34 34 SER SER B . n B 2 35 ASN 35 35 35 ASN ASN B . n B 2 36 SER 36 36 36 SER SER B . n B 2 37 LEU 37 37 37 LEU LEU B . n B 2 38 ASN 38 38 38 ASN ASN B . n B 2 39 ASP 39 39 ? ? ? B . n B 2 40 LEU 40 40 40 LEU LEU B . n B 2 41 LYS 41 41 41 LYS LYS B . n B 2 42 LEU 42 42 42 LEU LEU B . n B 2 43 ASP 43 43 43 ASP ASP B . n B 2 44 ILE 44 44 44 ILE ILE B . n B 2 45 LYS 45 45 45 LYS LYS B . n B 2 46 LYS 46 46 46 LYS LYS B . n B 2 47 ILE 47 47 47 ILE ILE B . n B 2 48 LYS 48 48 48 LYS LYS B . n B 2 49 GLY 49 49 49 GLY GLY B . n B 2 50 TYR 50 50 50 TYR TYR B . n B 2 51 HIS 51 51 51 HIS HIS B . n B 2 52 ASN 52 52 52 ASN ASN B . n B 2 53 TYR 53 53 53 TYR TYR B . n B 2 54 TYR 54 54 54 TYR TYR B . n B 2 55 ARG 55 55 55 ARG ARG B . n B 2 56 ILE 56 56 56 ILE ILE B . n B 2 57 ARG 57 57 57 ARG ARG B . n B 2 58 VAL 58 58 58 VAL VAL B . n B 2 59 GLY 59 59 59 GLY GLY B . n B 2 60 ASN 60 60 60 ASN ASN B . n B 2 61 TYR 61 61 61 TYR TYR B . n B 2 62 SER 62 62 62 SER SER B . n B 2 63 ILE 63 63 63 ILE ILE B . n B 2 64 GLY 64 64 64 GLY GLY B . n B 2 65 ILE 65 65 65 ILE ILE B . n B 2 66 GLU 66 66 66 GLU GLU B . n B 2 67 VAL 67 67 67 VAL VAL B . n B 2 68 ASN 68 68 68 ASN ASN B . n B 2 69 GLY 69 69 69 GLY GLY B . n B 2 70 ASP 70 70 70 ASP ASP B . n B 2 71 THR 71 71 71 THR THR B . n B 2 72 ILE 72 72 72 ILE ILE B . n B 2 73 ILE 73 73 73 ILE ILE B . n B 2 74 PHE 74 74 74 PHE PHE B . n B 2 75 ARG 75 75 75 ARG ARG B . n B 2 76 ARG 76 76 76 ARG ARG B . n B 2 77 VAL 77 77 77 VAL VAL B . n B 2 78 LEU 78 78 78 LEU LEU B . n B 2 79 HIS 79 79 79 HIS HIS B . n B 2 80 ARG 80 80 80 ARG ARG B . n B 2 81 LYS 81 81 81 LYS LYS B . n B 2 82 SER 82 82 82 SER SER B . n B 2 83 ILE 83 83 83 ILE ILE B . n B 2 84 TYR 84 84 84 TYR TYR B . n B 2 85 ASP 85 85 85 ASP ASP B . n B 2 86 TYR 86 86 86 TYR TYR B . n B 2 87 PHE 87 87 87 PHE PHE B . n B 2 88 PRO 88 88 88 PRO PRO B . n C 1 1 MET 1 1 ? ? ? C . n C 1 2 ARG 2 2 ? ? ? C . n C 1 3 LEU 3 3 ? ? ? C . n C 1 4 LYS 4 4 ? ? ? C . n C 1 5 LYS 5 5 ? ? ? C . n C 1 6 ARG 6 6 ? ? ? C . n C 1 7 PHE 7 7 ? ? ? C . n C 1 8 LYS 8 8 ? ? ? C . n C 1 9 LYS 9 9 9 LYS LYS C . n C 1 10 PHE 10 10 10 PHE PHE C . n C 1 11 PHE 11 11 11 PHE PHE C . n C 1 12 ILE 12 12 12 ILE ILE C . n C 1 13 SER 13 13 13 SER SER C . n C 1 14 ARG 14 14 14 ARG ARG C . n C 1 15 LYS 15 15 15 LYS LYS C . n C 1 16 GLU 16 16 16 GLU GLU C . n C 1 17 TYR 17 17 17 TYR TYR C . n C 1 18 GLU 18 18 18 GLU GLU C . n C 1 19 LYS 19 19 19 LYS LYS C . n C 1 20 ILE 20 20 20 ILE ILE C . n C 1 21 GLU 21 21 21 GLU GLU C . n C 1 22 GLU 22 22 22 GLU GLU C . n C 1 23 ILE 23 23 23 ILE ILE C . n C 1 24 LEU 24 24 24 LEU LEU C . n C 1 25 ASP 25 25 25 ASP ASP C . n C 1 26 ILE 26 26 26 ILE ILE C . n C 1 27 GLY 27 27 27 GLY GLY C . n C 1 28 LEU 28 28 28 LEU LEU C . n C 1 29 ALA 29 29 29 ALA ALA C . n C 1 30 LYS 30 30 30 LYS LYS C . n C 1 31 ALA 31 31 31 ALA ALA C . n C 1 32 MET 32 32 32 MET MET C . n C 1 33 GLU 33 33 33 GLU GLU C . n C 1 34 GLU 34 34 34 GLU GLU C . n C 1 35 THR 35 35 35 THR THR C . n C 1 36 LYS 36 36 36 LYS LYS C . n C 1 37 ASP 37 37 37 ASP ASP C . n C 1 38 ASP 38 38 38 ASP ASP C . n C 1 39 GLU 39 39 39 GLU GLU C . n C 1 40 LEU 40 40 40 LEU LEU C . n C 1 41 LEU 41 41 41 LEU LEU C . n C 1 42 THR 42 42 42 THR THR C . n C 1 43 TYR 43 43 43 TYR TYR C . n C 1 44 ASP 44 44 44 ASP ASP C . n C 1 45 GLU 45 45 45 GLU GLU C . n C 1 46 ILE 46 46 46 ILE ILE C . n C 1 47 LYS 47 47 47 LYS LYS C . n C 1 48 GLU 48 48 ? ? ? C . n C 1 49 LEU 49 49 ? ? ? C . n C 1 50 LEU 50 50 ? ? ? C . n C 1 51 GLY 51 51 ? ? ? C . n C 1 52 ASP 52 52 ? ? ? C . n D 2 1 MET 1 1 ? ? ? D . n D 2 2 LYS 2 2 ? ? ? D . n D 2 3 VAL 3 3 3 VAL VAL D . n D 2 4 LEU 4 4 4 LEU LEU D . n D 2 5 PHE 5 5 5 PHE PHE D . n D 2 6 ALA 6 6 6 ALA ALA D . n D 2 7 LYS 7 7 7 LYS LYS D . n D 2 8 THR 8 8 8 THR THR D . n D 2 9 PHE 9 9 9 PHE PHE D . n D 2 10 VAL 10 10 10 VAL VAL D . n D 2 11 LYS 11 11 11 LYS LYS D . n D 2 12 ASP 12 12 12 ASP ASP D . n D 2 13 LEU 13 13 13 LEU LEU D . n D 2 14 LYS 14 14 14 LYS LYS D . n D 2 15 HIS 15 15 15 HIS HIS D . n D 2 16 VAL 16 16 16 VAL VAL D . n D 2 17 PRO 17 17 17 PRO PRO D . n D 2 18 GLY 18 18 18 GLY GLY D . n D 2 19 HIS 19 19 19 HIS HIS D . n D 2 20 ILE 20 20 20 ILE ILE D . n D 2 21 ARG 21 21 21 ARG ARG D . n D 2 22 LYS 22 22 22 LYS LYS D . n D 2 23 ARG 23 23 23 ARG ARG D . n D 2 24 ILE 24 24 24 ILE ILE D . n D 2 25 LYS 25 25 25 LYS LYS D . n D 2 26 LEU 26 26 26 LEU LEU D . n D 2 27 ILE 27 27 27 ILE ILE D . n D 2 28 ILE 28 28 28 ILE ILE D . n D 2 29 GLU 29 29 29 GLU GLU D . n D 2 30 GLU 30 30 30 GLU GLU D . n D 2 31 CYS 31 31 31 CYS CYS D . n D 2 32 GLN 32 32 32 GLN GLN D . n D 2 33 ASN 33 33 33 ASN ASN D . n D 2 34 SER 34 34 34 SER SER D . n D 2 35 ASN 35 35 35 ASN ASN D . n D 2 36 SER 36 36 36 SER SER D . n D 2 37 LEU 37 37 37 LEU LEU D . n D 2 38 ASN 38 38 38 ASN ASN D . n D 2 39 ASP 39 39 39 ASP ASP D . n D 2 40 LEU 40 40 40 LEU LEU D . n D 2 41 LYS 41 41 41 LYS LYS D . n D 2 42 LEU 42 42 42 LEU LEU D . n D 2 43 ASP 43 43 43 ASP ASP D . n D 2 44 ILE 44 44 44 ILE ILE D . n D 2 45 LYS 45 45 45 LYS LYS D . n D 2 46 LYS 46 46 46 LYS LYS D . n D 2 47 ILE 47 47 47 ILE ILE D . n D 2 48 LYS 48 48 48 LYS LYS D . n D 2 49 GLY 49 49 49 GLY GLY D . n D 2 50 TYR 50 50 50 TYR TYR D . n D 2 51 HIS 51 51 51 HIS HIS D . n D 2 52 ASN 52 52 52 ASN ASN D . n D 2 53 TYR 53 53 53 TYR TYR D . n D 2 54 TYR 54 54 54 TYR TYR D . n D 2 55 ARG 55 55 55 ARG ARG D . n D 2 56 ILE 56 56 56 ILE ILE D . n D 2 57 ARG 57 57 57 ARG ARG D . n D 2 58 VAL 58 58 58 VAL VAL D . n D 2 59 GLY 59 59 59 GLY GLY D . n D 2 60 ASN 60 60 60 ASN ASN D . n D 2 61 TYR 61 61 61 TYR TYR D . n D 2 62 SER 62 62 62 SER SER D . n D 2 63 ILE 63 63 63 ILE ILE D . n D 2 64 GLY 64 64 64 GLY GLY D . n D 2 65 ILE 65 65 65 ILE ILE D . n D 2 66 GLU 66 66 66 GLU GLU D . n D 2 67 VAL 67 67 67 VAL VAL D . n D 2 68 ASN 68 68 68 ASN ASN D . n D 2 69 GLY 69 69 69 GLY GLY D . n D 2 70 ASP 70 70 70 ASP ASP D . n D 2 71 THR 71 71 71 THR THR D . n D 2 72 ILE 72 72 72 ILE ILE D . n D 2 73 ILE 73 73 73 ILE ILE D . n D 2 74 PHE 74 74 74 PHE PHE D . n D 2 75 ARG 75 75 75 ARG ARG D . n D 2 76 ARG 76 76 76 ARG ARG D . n D 2 77 VAL 77 77 77 VAL VAL D . n D 2 78 LEU 78 78 78 LEU LEU D . n D 2 79 HIS 79 79 79 HIS HIS D . n D 2 80 ARG 80 80 80 ARG ARG D . n D 2 81 LYS 81 81 81 LYS LYS D . n D 2 82 SER 82 82 82 SER SER D . n D 2 83 ILE 83 83 83 ILE ILE D . n D 2 84 TYR 84 84 84 TYR TYR D . n D 2 85 ASP 85 85 85 ASP ASP D . n D 2 86 TYR 86 86 86 TYR TYR D . n D 2 87 PHE 87 87 87 PHE PHE D . n D 2 88 PRO 88 88 88 PRO PRO D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HOH 1 53 13 HOH HOH A . E 3 HOH 2 54 16 HOH HOH A . E 3 HOH 3 55 21 HOH HOH A . E 3 HOH 4 56 24 HOH HOH A . E 3 HOH 5 57 35 HOH HOH A . E 3 HOH 6 58 38 HOH HOH A . E 3 HOH 7 59 44 HOH HOH A . E 3 HOH 8 60 48 HOH HOH A . E 3 HOH 9 61 54 HOH HOH A . E 3 HOH 10 62 56 HOH HOH A . F 3 HOH 1 89 4 HOH HOH B . F 3 HOH 2 90 5 HOH HOH B . F 3 HOH 3 91 6 HOH HOH B . F 3 HOH 4 92 10 HOH HOH B . F 3 HOH 5 93 11 HOH HOH B . F 3 HOH 6 94 17 HOH HOH B . F 3 HOH 7 95 19 HOH HOH B . F 3 HOH 8 96 27 HOH HOH B . F 3 HOH 9 97 32 HOH HOH B . F 3 HOH 10 98 39 HOH HOH B . F 3 HOH 11 99 42 HOH HOH B . F 3 HOH 12 100 45 HOH HOH B . F 3 HOH 13 101 46 HOH HOH B . F 3 HOH 14 102 47 HOH HOH B . F 3 HOH 15 103 51 HOH HOH B . F 3 HOH 16 104 52 HOH HOH B . G 3 HOH 1 53 8 HOH HOH C . G 3 HOH 2 54 14 HOH HOH C . G 3 HOH 3 55 15 HOH HOH C . G 3 HOH 4 56 18 HOH HOH C . G 3 HOH 5 57 20 HOH HOH C . G 3 HOH 6 58 22 HOH HOH C . G 3 HOH 7 59 23 HOH HOH C . G 3 HOH 8 60 26 HOH HOH C . G 3 HOH 9 61 28 HOH HOH C . G 3 HOH 10 62 30 HOH HOH C . G 3 HOH 11 63 34 HOH HOH C . G 3 HOH 12 64 40 HOH HOH C . G 3 HOH 13 65 41 HOH HOH C . G 3 HOH 14 66 50 HOH HOH C . G 3 HOH 15 67 53 HOH HOH C . H 3 HOH 1 89 1 HOH HOH D . H 3 HOH 2 90 2 HOH HOH D . H 3 HOH 3 91 3 HOH HOH D . H 3 HOH 4 92 7 HOH HOH D . H 3 HOH 5 93 9 HOH HOH D . H 3 HOH 6 94 12 HOH HOH D . H 3 HOH 7 95 25 HOH HOH D . H 3 HOH 8 96 29 HOH HOH D . H 3 HOH 9 97 31 HOH HOH D . H 3 HOH 10 98 33 HOH HOH D . H 3 HOH 11 99 36 HOH HOH D . H 3 HOH 12 100 37 HOH HOH D . H 3 HOH 13 101 43 HOH HOH D . H 3 HOH 14 102 49 HOH HOH D . H 3 HOH 15 103 57 HOH HOH D . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 MAR345 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 SHARP phasing . ? 5 # _cell.entry_id 3BPQ _cell.length_a 52.794 _cell.length_b 57.992 _cell.length_c 58.747 _cell.angle_alpha 90.00 _cell.angle_beta 92.30 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3BPQ _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3BPQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.67 _exptl_crystal.density_percent_sol 53.90 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pdbx_details '20%MPD, 0.1M Bis-Tris pH5.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2006-07-12 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si-111 crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.94905 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'BESSY BEAMLINE 14.1' _diffrn_source.pdbx_synchrotron_site BESSY _diffrn_source.pdbx_synchrotron_beamline 14.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.94905 # _reflns.entry_id 3BPQ _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I 3.0 _reflns.d_resolution_high 2.130 _reflns.d_resolution_low 50.000 _reflns.number_all ? _reflns.number_obs 19952 _reflns.percent_possible_obs 99.60 _reflns.pdbx_Rmerge_I_obs 0.050 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.4 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.13 _reflns_shell.d_res_low 2.18 _reflns_shell.percent_possible_all 98.9 _reflns_shell.Rmerge_I_obs 0.421 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.13 _reflns_shell.pdbx_redundancy 4.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1332 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3BPQ _refine.ls_number_reflns_obs 17159 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 99.71 _refine.ls_R_factor_obs 0.24007 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.23825 _refine.ls_R_factor_R_free 0.27418 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 931 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.939 _refine.correlation_coeff_Fo_to_Fc_free 0.903 _refine.B_iso_mean 50.042 _refine.aniso_B[1][1] 0.73 _refine.aniso_B[2][2] -3.96 _refine.aniso_B[3][3] 3.53 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 3.78 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.273 _refine.pdbx_overall_ESU_R_Free 0.220 _refine.overall_SU_ML 0.202 _refine.overall_SU_B 16.068 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2118 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 56 _refine_hist.number_atoms_total 2174 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.008 0.022 ? 2173 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.058 1.977 ? 2908 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.217 5.000 ? 252 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 31.571 23.704 ? 108 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.500 15.000 ? 452 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14.487 15.000 ? 16 'X-RAY DIFFRACTION' ? r_chiral_restr 0.074 0.200 ? 318 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 1584 'X-RAY DIFFRACTION' ? r_nbd_refined 0.198 0.200 ? 909 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.304 0.200 ? 1446 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.131 0.200 ? 96 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.161 0.200 ? 16 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.094 0.200 ? 8 'X-RAY DIFFRACTION' ? r_mcbond_it 0.388 1.500 ? 1310 'X-RAY DIFFRACTION' ? r_mcangle_it 0.661 2.000 ? 2039 'X-RAY DIFFRACTION' ? r_scbond_it 0.961 3.000 ? 980 'X-RAY DIFFRACTION' ? r_scangle_it 1.403 4.500 ? 866 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.200 _refine_ls_shell.d_res_low 2.256 _refine_ls_shell.number_reflns_R_work 1242 _refine_ls_shell.R_factor_R_work 0.268 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.296 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 70 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3BPQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3BPQ _struct.title 'Crystal Structure of RelB-RelE antitoxin-toxin complex from Methanococcus jannaschii' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3BPQ _struct_keywords.pdbx_keywords TOXIN _struct_keywords.text 'protein toxin-antitoxin complex, TOXIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP RELB3_METJA P0CL56 1 MRLKKRFKKFFISRKEYEKIEEILDIGLAKAMEETKDDELLTYDEIKELLGD 1 ? 2 UNP RELE3_METJA Q58503 2 ;MKVLFAKTFVKDLKHVPGHIRKRIKLIIEECQNSNSLNDLKLDIKKIKGYHNYYRIRVGNYRIGIEVNGDTIIFRRVLHR KSIYDYFP ; 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3BPQ A 1 ? 52 ? P0CL56 1 ? 52 ? 1 52 2 2 3BPQ B 1 ? 88 ? Q58503 1 ? 88 ? 1 88 3 1 3BPQ C 1 ? 52 ? P0CL56 1 ? 52 ? 1 52 4 2 3BPQ D 1 ? 88 ? Q58503 1 ? 88 ? 1 88 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 2 3BPQ SER B 62 ? UNP Q58503 ARG 62 'engineered mutation' 62 1 4 3BPQ SER D 62 ? UNP Q58503 ARG 62 'engineered mutation' 62 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7610 ? 1 MORE -52 ? 1 'SSA (A^2)' 14260 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 13 ? GLU A 34 ? SER A 13 GLU A 34 1 ? 22 HELX_P HELX_P2 2 THR A 42 ? GLU A 48 ? THR A 42 GLU A 48 1 ? 7 HELX_P HELX_P3 3 LYS B 7 ? LYS B 14 ? LYS B 7 LYS B 14 1 ? 8 HELX_P HELX_P4 4 PRO B 17 ? ASN B 35 ? PRO B 17 ASN B 35 1 ? 19 HELX_P HELX_P5 5 ARG B 80 ? TYR B 84 ? ARG B 80 TYR B 84 1 ? 5 HELX_P HELX_P6 6 ASP B 85 ? PHE B 87 ? ASP B 85 PHE B 87 5 ? 3 HELX_P HELX_P7 7 ARG C 14 ? GLU C 34 ? ARG C 14 GLU C 34 1 ? 21 HELX_P HELX_P8 8 LYS D 7 ? HIS D 15 ? LYS D 7 HIS D 15 1 ? 9 HELX_P HELX_P9 9 PRO D 17 ? ASN D 35 ? PRO D 17 ASN D 35 1 ? 19 HELX_P HELX_P10 10 ARG D 80 ? TYR D 84 ? ARG D 80 TYR D 84 1 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PHE 87 B . ? PHE 87 B PRO 88 B ? PRO 88 B 1 -6.46 2 SER 13 C . ? SER 13 C ARG 14 C ? ARG 14 C 1 2.49 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 6 ? C ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 11 ? ILE A 12 ? PHE A 11 ILE A 12 A 2 PHE C 10 ? PHE C 11 ? PHE C 10 PHE C 11 B 1 LEU A 40 ? LEU A 41 ? LEU A 40 LEU A 41 B 2 LEU B 4 ? ALA B 6 ? LEU B 4 ALA B 6 B 3 THR B 71 ? HIS B 79 ? THR B 71 HIS B 79 B 4 TYR B 61 ? ASN B 68 ? TYR B 61 ASN B 68 B 5 TYR B 53 ? VAL B 58 ? TYR B 53 VAL B 58 B 6 ILE B 44 ? LYS B 46 ? ILE B 44 LYS B 46 C 1 LEU C 40 ? THR C 42 ? LEU C 40 THR C 42 C 2 LEU D 4 ? ALA D 6 ? LEU D 4 ALA D 6 C 3 THR D 71 ? HIS D 79 ? THR D 71 HIS D 79 C 4 TYR D 61 ? ASN D 68 ? TYR D 61 ASN D 68 C 5 TYR D 53 ? VAL D 58 ? TYR D 53 VAL D 58 C 6 ILE D 44 ? LYS D 46 ? ILE D 44 LYS D 46 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 12 ? N ILE A 12 O PHE C 10 ? O PHE C 10 B 1 2 N LEU A 41 ? N LEU A 41 O PHE B 5 ? O PHE B 5 B 2 3 N LEU B 4 ? N LEU B 4 O PHE B 74 ? O PHE B 74 B 3 4 O ARG B 76 ? O ARG B 76 N GLY B 64 ? N GLY B 64 B 4 5 O TYR B 61 ? O TYR B 61 N VAL B 58 ? N VAL B 58 B 5 6 O ARG B 55 ? O ARG B 55 N LYS B 45 ? N LYS B 45 C 1 2 N LEU C 41 ? N LEU C 41 O PHE D 5 ? O PHE D 5 C 2 3 N LEU D 4 ? N LEU D 4 O PHE D 74 ? O PHE D 74 C 3 4 O LEU D 78 ? O LEU D 78 N SER D 62 ? N SER D 62 C 4 5 O TYR D 61 ? O TYR D 61 N VAL D 58 ? N VAL D 58 C 5 6 O ARG D 55 ? O ARG D 55 N LYS D 45 ? N LYS D 45 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS B 41 ? ? -69.92 19.55 2 1 ILE C 12 ? ? -131.53 -50.82 3 1 SER C 13 ? ? -7.97 141.76 4 1 ARG C 14 ? ? -146.61 -41.53 5 1 TYR D 84 ? ? -59.39 -2.75 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined -2.2990 39.9660 23.1130 -0.1667 -0.1954 -0.0188 0.0080 -0.0289 -0.0559 8.8929 7.3312 11.3070 2.5767 -6.6565 -5.4500 0.6249 0.5360 0.2607 0.5088 -0.1900 0.2960 -0.8216 0.1877 -0.4348 'X-RAY DIFFRACTION' 2 ? refined -9.3190 41.5050 26.4660 -0.1992 -0.2159 -0.0205 0.0250 -0.0023 -0.0205 6.4152 7.8828 5.3240 1.5309 -1.5602 -0.2770 0.0078 0.3770 0.0736 0.1306 -0.0070 0.9151 -0.0205 -0.3079 -0.0009 'X-RAY DIFFRACTION' 3 ? refined 16.6760 33.2950 10.0170 -0.2091 -0.0279 -0.1145 -0.0402 0.0383 -0.0190 10.3537 20.4175 11.2747 -12.1209 -8.9644 12.7056 0.4176 0.2688 0.5380 -0.8323 0.0404 -0.7986 -0.5259 -0.2010 -0.4579 'X-RAY DIFFRACTION' 4 ? refined 23.5490 32.2210 6.2110 -0.2008 0.0047 -0.1166 -0.0423 0.0602 -0.0787 5.0598 8.8884 6.3362 0.1154 -0.4111 1.2509 0.0442 0.1027 0.2956 -0.4003 0.1466 -0.4640 -0.0105 0.1377 -0.1908 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 8 A 8 A 48 A 48 ? 'X-RAY DIFFRACTION' ? 2 2 B 3 B 3 B 88 B 88 ? 'X-RAY DIFFRACTION' ? 3 3 C 9 C 9 C 47 C 47 ? 'X-RAY DIFFRACTION' ? 4 4 D 3 D 3 D 88 D 88 ? 'X-RAY DIFFRACTION' ? # _phasing.method MIR # loop_ _phasing_MIR_der.id _phasing_MIR_der.der_set_id _phasing_MIR_der.native_set_id _phasing_MIR_der.d_res_low _phasing_MIR_der.d_res_high _phasing_MIR_der.reflns_acentric _phasing_MIR_der.reflns_centric _phasing_MIR_der.R_cullis_acentric _phasing_MIR_der.R_cullis_centric ISO_1 1 1 32.95 2.13 18691 951 0.000 0.000 ISO_2 2 1 32.95 2.13 10255 302 0.842 0.794 ISO_3 3 1 32.95 2.13 8870 271 0.907 0.792 # loop_ _phasing_MIR_der_shell.der_id _phasing_MIR_der_shell.d_res_low _phasing_MIR_der_shell.d_res_high _phasing_MIR_der_shell.pdbx_reflns_acentric _phasing_MIR_der_shell.pdbx_reflns_centric _phasing_MIR_der_shell.pdbx_R_cullis_acentric _phasing_MIR_der_shell.pdbx_R_cullis_centric ISO_1 32.95 9.17 166 36 0.000 0.000 ISO_1 9.17 6.61 372 46 0.000 0.000 ISO_1 6.61 5.44 491 56 0.000 0.000 ISO_1 5.44 4.72 589 53 0.000 0.000 ISO_1 4.72 4.23 656 47 0.000 0.000 ISO_1 4.23 3.87 725 46 0.000 0.000 ISO_1 3.87 3.59 797 41 0.000 0.000 ISO_1 3.59 3.36 864 34 0.000 0.000 ISO_1 3.36 3.17 904 45 0.000 0.000 ISO_1 3.17 3.01 963 43 0.000 0.000 ISO_1 3.01 2.87 1015 49 0.000 0.000 ISO_1 2.87 2.75 1060 50 0.000 0.000 ISO_1 2.75 2.64 1109 44 0.000 0.000 ISO_1 2.64 2.54 1140 51 0.000 0.000 ISO_1 2.54 2.46 1223 51 0.000 0.000 ISO_1 2.46 2.38 1238 54 0.000 0.000 ISO_1 2.38 2.31 1276 51 0.000 0.000 ISO_1 2.31 2.24 1325 57 0.000 0.000 ISO_1 2.24 2.19 1377 54 0.000 0.000 ISO_1 2.19 2.13 1401 43 0.000 0.000 ISO_2 32.95 9.17 165 18 0.673 0.732 ISO_2 9.17 6.61 372 21 0.740 0.712 ISO_2 6.61 5.44 491 30 0.778 0.724 ISO_2 5.44 4.72 589 25 0.803 0.875 ISO_2 4.72 4.23 656 26 0.872 0.800 ISO_2 4.23 3.87 725 20 0.903 0.765 ISO_2 3.87 3.59 795 19 0.887 0.803 ISO_2 3.59 3.36 864 15 0.876 0.921 ISO_2 3.36 3.17 904 22 0.873 1.005 ISO_2 3.17 3.01 962 24 0.903 0.845 ISO_2 3.01 2.87 1014 24 0.902 0.966 ISO_2 2.87 2.75 1059 23 0.885 1.169 ISO_2 2.75 2.64 1108 25 0.942 1.002 ISO_2 2.64 2.54 551 10 0.967 1.658 ISO_2 2.54 2.46 0 0 0.000 0.000 ISO_2 2.46 2.38 0 0 0.000 0.000 ISO_2 2.38 2.31 0 0 0.000 0.000 ISO_2 2.31 2.24 0 0 0.000 0.000 ISO_2 2.24 2.19 0 0 0.000 0.000 ISO_2 2.19 2.13 0 0 0.000 0.000 ISO_3 32.95 9.17 165 18 0.759 0.637 ISO_3 9.17 6.61 372 22 0.821 0.931 ISO_3 6.61 5.44 491 30 0.843 0.869 ISO_3 5.44 4.72 588 25 0.932 0.906 ISO_3 4.72 4.23 653 26 0.940 0.757 ISO_3 4.23 3.87 725 21 0.950 1.039 ISO_3 3.87 3.59 797 19 0.942 0.902 ISO_3 3.59 3.36 864 16 0.954 0.877 ISO_3 3.36 3.17 902 21 0.974 0.950 ISO_3 3.17 3.01 961 24 1.002 1.371 ISO_3 3.01 2.87 1014 24 0.993 0.844 ISO_3 2.87 2.75 1046 22 1.042 1.099 ISO_3 2.75 2.64 292 3 1.025 0.775 ISO_3 2.64 2.54 0 0 0.000 0.000 ISO_3 2.54 2.46 0 0 0.000 0.000 ISO_3 2.46 2.38 0 0 0.000 0.000 ISO_3 2.38 2.31 0 0 0.000 0.000 ISO_3 2.31 2.24 0 0 0.000 0.000 ISO_3 2.24 2.19 0 0 0.000 0.000 ISO_3 2.19 2.13 0 0 0.000 0.000 # loop_ _phasing_set.id _phasing_set.pdbx_d_res_high _phasing_set.pdbx_d_res_low 1 . . 2 . . 3 . . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ARG 2 ? A ARG 2 3 1 Y 1 A LEU 3 ? A LEU 3 4 1 Y 1 A LYS 4 ? A LYS 4 5 1 Y 1 A LYS 5 ? A LYS 5 6 1 Y 1 A ARG 6 ? A ARG 6 7 1 Y 1 A PHE 7 ? A PHE 7 8 1 Y 1 A LEU 49 ? A LEU 49 9 1 Y 1 A LEU 50 ? A LEU 50 10 1 Y 1 A GLY 51 ? A GLY 51 11 1 Y 1 A ASP 52 ? A ASP 52 12 1 Y 1 B MET 1 ? B MET 1 13 1 Y 1 B LYS 2 ? B LYS 2 14 1 Y 1 B ASP 39 ? B ASP 39 15 1 Y 1 C MET 1 ? C MET 1 16 1 Y 1 C ARG 2 ? C ARG 2 17 1 Y 1 C LEU 3 ? C LEU 3 18 1 Y 1 C LYS 4 ? C LYS 4 19 1 Y 1 C LYS 5 ? C LYS 5 20 1 Y 1 C ARG 6 ? C ARG 6 21 1 Y 1 C PHE 7 ? C PHE 7 22 1 Y 1 C LYS 8 ? C LYS 8 23 1 Y 1 C GLU 48 ? C GLU 48 24 1 Y 1 C LEU 49 ? C LEU 49 25 1 Y 1 C LEU 50 ? C LEU 50 26 1 Y 1 C GLY 51 ? C GLY 51 27 1 Y 1 C ASP 52 ? C ASP 52 28 1 Y 1 D MET 1 ? D MET 1 29 1 Y 1 D LYS 2 ? D LYS 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TYR N N N N 321 TYR CA C N S 322 TYR C C N N 323 TYR O O N N 324 TYR CB C N N 325 TYR CG C Y N 326 TYR CD1 C Y N 327 TYR CD2 C Y N 328 TYR CE1 C Y N 329 TYR CE2 C Y N 330 TYR CZ C Y N 331 TYR OH O N N 332 TYR OXT O N N 333 TYR H H N N 334 TYR H2 H N N 335 TYR HA H N N 336 TYR HB2 H N N 337 TYR HB3 H N N 338 TYR HD1 H N N 339 TYR HD2 H N N 340 TYR HE1 H N N 341 TYR HE2 H N N 342 TYR HH H N N 343 TYR HXT H N N 344 VAL N N N N 345 VAL CA C N S 346 VAL C C N N 347 VAL O O N N 348 VAL CB C N N 349 VAL CG1 C N N 350 VAL CG2 C N N 351 VAL OXT O N N 352 VAL H H N N 353 VAL H2 H N N 354 VAL HA H N N 355 VAL HB H N N 356 VAL HG11 H N N 357 VAL HG12 H N N 358 VAL HG13 H N N 359 VAL HG21 H N N 360 VAL HG22 H N N 361 VAL HG23 H N N 362 VAL HXT H N N 363 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TYR N CA sing N N 306 TYR N H sing N N 307 TYR N H2 sing N N 308 TYR CA C sing N N 309 TYR CA CB sing N N 310 TYR CA HA sing N N 311 TYR C O doub N N 312 TYR C OXT sing N N 313 TYR CB CG sing N N 314 TYR CB HB2 sing N N 315 TYR CB HB3 sing N N 316 TYR CG CD1 doub Y N 317 TYR CG CD2 sing Y N 318 TYR CD1 CE1 sing Y N 319 TYR CD1 HD1 sing N N 320 TYR CD2 CE2 doub Y N 321 TYR CD2 HD2 sing N N 322 TYR CE1 CZ doub Y N 323 TYR CE1 HE1 sing N N 324 TYR CE2 CZ sing Y N 325 TYR CE2 HE2 sing N N 326 TYR CZ OH sing N N 327 TYR OH HH sing N N 328 TYR OXT HXT sing N N 329 VAL N CA sing N N 330 VAL N H sing N N 331 VAL N H2 sing N N 332 VAL CA C sing N N 333 VAL CA CB sing N N 334 VAL CA HA sing N N 335 VAL C O doub N N 336 VAL C OXT sing N N 337 VAL CB CG1 sing N N 338 VAL CB CG2 sing N N 339 VAL CB HB sing N N 340 VAL CG1 HG11 sing N N 341 VAL CG1 HG12 sing N N 342 VAL CG1 HG13 sing N N 343 VAL CG2 HG21 sing N N 344 VAL CG2 HG22 sing N N 345 VAL CG2 HG23 sing N N 346 VAL OXT HXT sing N N 347 # _atom_sites.entry_id 3BPQ _atom_sites.fract_transf_matrix[1][1] 0.018942 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000760 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017244 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017036 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_