HEADER TOXIN 19-DEC-07 3BPQ TITLE CRYSTAL STRUCTURE OF RELB-RELE ANTITOXIN-TOXIN COMPLEX FROM TITLE 2 METHANOCOCCUS JANNASCHII COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTITOXIN RELB3; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: RELB; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: TOXIN RELE3; COMPND 8 CHAIN: B, D; COMPND 9 SYNONYM: UNCHARACTERIZED PROTEIN MJ1103, MJRELE, PUTATIVE COMPND 10 ENDORIBONUCLEASE RELE; COMPND 11 EC: 3.1.-.-; COMPND 12 ENGINEERED: YES; COMPND 13 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOCALDOCOCCUS JANNASCHII; SOURCE 3 ORGANISM_TAXID: 243232; SOURCE 4 STRAIN: DSM2661; SOURCE 5 GENE: RELB3, RELB, MJ1103.1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: K-12; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: METHANOCALDOCOCCUS JANNASCHII; SOURCE 13 ORGANISM_TAXID: 243232; SOURCE 14 STRAIN: DSM2661; SOURCE 15 GENE: MJ1103, RELE, RELE3; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: K-12; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET21 KEYWDS PROTEIN TOXIN-ANTITOXIN COMPLEX, TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR D.FRANCUSKI,W.SAENGER REVDAT 6 13-MAR-24 3BPQ 1 SEQADV REVDAT 5 25-OCT-17 3BPQ 1 REMARK REVDAT 4 31-AUG-11 3BPQ 1 COMPND DBREF SOURCE REVDAT 3 24-AUG-11 3BPQ 1 JRNL SOURCE REVDAT 2 13-JUL-11 3BPQ 1 VERSN REVDAT 1 23-DEC-08 3BPQ 0 JRNL AUTH D.FRANCUSKI,W.SAENGER JRNL TITL CRYSTAL STRUCTURE OF THE ANTITOXIN-TOXIN PROTEIN COMPLEX JRNL TITL 2 RELB-RELE FROM METHANOCOCCUS JANNASCHII JRNL REF J.MOL.BIOL. V. 393 898 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19712680 JRNL DOI 10.1016/J.JMB.2009.08.048 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 17159 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.240 REMARK 3 R VALUE (WORKING SET) : 0.238 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 931 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1242 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2680 REMARK 3 BIN FREE R VALUE SET COUNT : 70 REMARK 3 BIN FREE R VALUE : 0.2960 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2118 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 56 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.73000 REMARK 3 B22 (A**2) : -3.96000 REMARK 3 B33 (A**2) : 3.53000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 3.78000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.273 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.220 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.202 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.068 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.903 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2173 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2908 ; 1.058 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 252 ; 5.217 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 108 ;31.571 ;23.704 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 452 ;17.500 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;14.487 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 318 ; 0.074 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1584 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 909 ; 0.198 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1446 ; 0.304 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 96 ; 0.131 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 16 ; 0.161 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.094 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1310 ; 0.388 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2039 ; 0.661 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 980 ; 0.961 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 866 ; 1.403 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 8 A 48 REMARK 3 ORIGIN FOR THE GROUP (A): -2.2990 39.9660 23.1130 REMARK 3 T TENSOR REMARK 3 T11: -0.1667 T22: -0.1954 REMARK 3 T33: -0.0188 T12: 0.0080 REMARK 3 T13: -0.0289 T23: -0.0559 REMARK 3 L TENSOR REMARK 3 L11: 8.8929 L22: 7.3312 REMARK 3 L33: 11.3070 L12: 2.5767 REMARK 3 L13: -6.6565 L23: -5.4500 REMARK 3 S TENSOR REMARK 3 S11: 0.6249 S12: 0.5360 S13: 0.2607 REMARK 3 S21: 0.5088 S22: -0.1900 S23: 0.2960 REMARK 3 S31: -0.8216 S32: 0.1877 S33: -0.4348 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 88 REMARK 3 ORIGIN FOR THE GROUP (A): -9.3190 41.5050 26.4660 REMARK 3 T TENSOR REMARK 3 T11: -0.1992 T22: -0.2159 REMARK 3 T33: -0.0205 T12: 0.0250 REMARK 3 T13: -0.0023 T23: -0.0205 REMARK 3 L TENSOR REMARK 3 L11: 6.4152 L22: 7.8828 REMARK 3 L33: 5.3240 L12: 1.5309 REMARK 3 L13: -1.5602 L23: -0.2770 REMARK 3 S TENSOR REMARK 3 S11: 0.0078 S12: 0.3770 S13: 0.0736 REMARK 3 S21: 0.1306 S22: -0.0070 S23: 0.9151 REMARK 3 S31: -0.0205 S32: -0.3079 S33: -0.0009 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 9 C 47 REMARK 3 ORIGIN FOR THE GROUP (A): 16.6760 33.2950 10.0170 REMARK 3 T TENSOR REMARK 3 T11: -0.2091 T22: -0.0279 REMARK 3 T33: -0.1145 T12: -0.0402 REMARK 3 T13: 0.0383 T23: -0.0190 REMARK 3 L TENSOR REMARK 3 L11: 10.3537 L22: 20.4175 REMARK 3 L33: 11.2747 L12: -12.1209 REMARK 3 L13: -8.9644 L23: 12.7056 REMARK 3 S TENSOR REMARK 3 S11: 0.4176 S12: 0.2688 S13: 0.5380 REMARK 3 S21: -0.8323 S22: 0.0404 S23: -0.7986 REMARK 3 S31: -0.5259 S32: -0.2010 S33: -0.4579 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 3 D 88 REMARK 3 ORIGIN FOR THE GROUP (A): 23.5490 32.2210 6.2110 REMARK 3 T TENSOR REMARK 3 T11: -0.2008 T22: 0.0047 REMARK 3 T33: -0.1166 T12: -0.0423 REMARK 3 T13: 0.0602 T23: -0.0787 REMARK 3 L TENSOR REMARK 3 L11: 5.0598 L22: 8.8884 REMARK 3 L33: 6.3362 L12: 0.1154 REMARK 3 L13: -0.4111 L23: 1.2509 REMARK 3 S TENSOR REMARK 3 S11: 0.0442 S12: 0.1027 S13: 0.2956 REMARK 3 S21: -0.4003 S22: 0.1466 S23: -0.4640 REMARK 3 S31: -0.0105 S32: 0.1377 S33: -0.1908 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3BPQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-DEC-07. REMARK 100 THE DEPOSITION ID IS D_1000045813. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUL-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.94905 REMARK 200 MONOCHROMATOR : SI-111 CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19952 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.130 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.13 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.42100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.130 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20%MPD, 0.1M BIS-TRIS PH5.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 28.99600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 LEU A 3 REMARK 465 LYS A 4 REMARK 465 LYS A 5 REMARK 465 ARG A 6 REMARK 465 PHE A 7 REMARK 465 LEU A 49 REMARK 465 LEU A 50 REMARK 465 GLY A 51 REMARK 465 ASP A 52 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 ASP B 39 REMARK 465 MET C 1 REMARK 465 ARG C 2 REMARK 465 LEU C 3 REMARK 465 LYS C 4 REMARK 465 LYS C 5 REMARK 465 ARG C 6 REMARK 465 PHE C 7 REMARK 465 LYS C 8 REMARK 465 GLU C 48 REMARK 465 LEU C 49 REMARK 465 LEU C 50 REMARK 465 GLY C 51 REMARK 465 ASP C 52 REMARK 465 MET D 1 REMARK 465 LYS D 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS B 41 19.55 -69.92 REMARK 500 ILE C 12 -50.82 -131.53 REMARK 500 SER C 13 141.76 -7.97 REMARK 500 ARG C 14 -41.53 -146.61 REMARK 500 TYR D 84 -2.75 -59.39 REMARK 500 REMARK 500 REMARK: NULL DBREF 3BPQ A 1 52 UNP P0CL56 RELB3_METJA 1 52 DBREF 3BPQ B 1 88 UNP Q58503 RELE3_METJA 1 88 DBREF 3BPQ C 1 52 UNP P0CL56 RELB3_METJA 1 52 DBREF 3BPQ D 1 88 UNP Q58503 RELE3_METJA 1 88 SEQADV 3BPQ SER B 62 UNP Q58503 ARG 62 ENGINEERED MUTATION SEQADV 3BPQ SER D 62 UNP Q58503 ARG 62 ENGINEERED MUTATION SEQRES 1 A 52 MET ARG LEU LYS LYS ARG PHE LYS LYS PHE PHE ILE SER SEQRES 2 A 52 ARG LYS GLU TYR GLU LYS ILE GLU GLU ILE LEU ASP ILE SEQRES 3 A 52 GLY LEU ALA LYS ALA MET GLU GLU THR LYS ASP ASP GLU SEQRES 4 A 52 LEU LEU THR TYR ASP GLU ILE LYS GLU LEU LEU GLY ASP SEQRES 1 B 88 MET LYS VAL LEU PHE ALA LYS THR PHE VAL LYS ASP LEU SEQRES 2 B 88 LYS HIS VAL PRO GLY HIS ILE ARG LYS ARG ILE LYS LEU SEQRES 3 B 88 ILE ILE GLU GLU CYS GLN ASN SER ASN SER LEU ASN ASP SEQRES 4 B 88 LEU LYS LEU ASP ILE LYS LYS ILE LYS GLY TYR HIS ASN SEQRES 5 B 88 TYR TYR ARG ILE ARG VAL GLY ASN TYR SER ILE GLY ILE SEQRES 6 B 88 GLU VAL ASN GLY ASP THR ILE ILE PHE ARG ARG VAL LEU SEQRES 7 B 88 HIS ARG LYS SER ILE TYR ASP TYR PHE PRO SEQRES 1 C 52 MET ARG LEU LYS LYS ARG PHE LYS LYS PHE PHE ILE SER SEQRES 2 C 52 ARG LYS GLU TYR GLU LYS ILE GLU GLU ILE LEU ASP ILE SEQRES 3 C 52 GLY LEU ALA LYS ALA MET GLU GLU THR LYS ASP ASP GLU SEQRES 4 C 52 LEU LEU THR TYR ASP GLU ILE LYS GLU LEU LEU GLY ASP SEQRES 1 D 88 MET LYS VAL LEU PHE ALA LYS THR PHE VAL LYS ASP LEU SEQRES 2 D 88 LYS HIS VAL PRO GLY HIS ILE ARG LYS ARG ILE LYS LEU SEQRES 3 D 88 ILE ILE GLU GLU CYS GLN ASN SER ASN SER LEU ASN ASP SEQRES 4 D 88 LEU LYS LEU ASP ILE LYS LYS ILE LYS GLY TYR HIS ASN SEQRES 5 D 88 TYR TYR ARG ILE ARG VAL GLY ASN TYR SER ILE GLY ILE SEQRES 6 D 88 GLU VAL ASN GLY ASP THR ILE ILE PHE ARG ARG VAL LEU SEQRES 7 D 88 HIS ARG LYS SER ILE TYR ASP TYR PHE PRO FORMUL 5 HOH *56(H2 O) HELIX 1 1 SER A 13 GLU A 34 1 22 HELIX 2 2 THR A 42 GLU A 48 1 7 HELIX 3 3 LYS B 7 LYS B 14 1 8 HELIX 4 4 PRO B 17 ASN B 35 1 19 HELIX 5 5 ARG B 80 TYR B 84 1 5 HELIX 6 6 ASP B 85 PHE B 87 5 3 HELIX 7 7 ARG C 14 GLU C 34 1 21 HELIX 8 8 LYS D 7 HIS D 15 1 9 HELIX 9 9 PRO D 17 ASN D 35 1 19 HELIX 10 10 ARG D 80 TYR D 84 1 5 SHEET 1 A 2 PHE A 11 ILE A 12 0 SHEET 2 A 2 PHE C 10 PHE C 11 -1 O PHE C 10 N ILE A 12 SHEET 1 B 6 LEU A 40 LEU A 41 0 SHEET 2 B 6 LEU B 4 ALA B 6 -1 O PHE B 5 N LEU A 41 SHEET 3 B 6 THR B 71 HIS B 79 1 O PHE B 74 N LEU B 4 SHEET 4 B 6 TYR B 61 ASN B 68 -1 N GLY B 64 O ARG B 76 SHEET 5 B 6 TYR B 53 VAL B 58 -1 N VAL B 58 O TYR B 61 SHEET 6 B 6 ILE B 44 LYS B 46 -1 N LYS B 45 O ARG B 55 SHEET 1 C 6 LEU C 40 THR C 42 0 SHEET 2 C 6 LEU D 4 ALA D 6 -1 O PHE D 5 N LEU C 41 SHEET 3 C 6 THR D 71 HIS D 79 1 O PHE D 74 N LEU D 4 SHEET 4 C 6 TYR D 61 ASN D 68 -1 N SER D 62 O LEU D 78 SHEET 5 C 6 TYR D 53 VAL D 58 -1 N VAL D 58 O TYR D 61 SHEET 6 C 6 ILE D 44 LYS D 46 -1 N LYS D 45 O ARG D 55 CISPEP 1 PHE B 87 PRO B 88 0 -6.46 CISPEP 2 SER C 13 ARG C 14 0 2.49 CRYST1 52.794 57.992 58.747 90.00 92.30 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018942 0.000000 0.000760 0.00000 SCALE2 0.000000 0.017244 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017036 0.00000