HEADER TRANSFERASE 21-DEC-07 3BRB TITLE CRYSTAL STRUCTURE OF CATALYTIC DOMAIN OF THE PROTO-ONCOGENE TYROSINE- TITLE 2 PROTEIN KINASE MER IN COMPLEX WITH ADP COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTO-ONCOGENE TYROSINE-PROTEIN KINASE MER; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CATALYTIC DOMAIN: RESIDUES 574-864; COMPND 5 SYNONYM: C-MER, RECEPTOR TYROSINE KINASE MERTK; COMPND 6 EC: 2.7.10.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 TISSUE: PERIPHERAL BLOOD LEUKOCYTE; SOURCE 6 GENE: MERTK, MER; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28A-LIC KEYWDS ATP-BINDING, DISEASE MUTATION, GLYCOPROTEIN, KINASE, NUCLEOTIDE- KEYWDS 2 BINDING, PHOSPHORYLATION, PROTO-ONCOGENE, RECEPTOR, RETINITIS KEYWDS 3 PIGMENTOSA, SENSORY TRANSDUCTION, TRANSFERASE, TYROSINE-PROTEIN KEYWDS 4 KINASE, VISION, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, KEYWDS 5 SGC, IMMUNOGLOBULIN DOMAIN, MEMBRANE, PHOSPHOPROTEIN, TRANSMEMBRANE EXPDTA X-RAY DIFFRACTION AUTHOR J.R.WALKER,X.HUANG,P.J.FINERTY JR,J.WEIGELT,C.H.ARROWSMITH, AUTHOR 2 A.M.EDWARDS,A.BOCHKAREV,S.DHE-PAGANON,STRUCTURAL GENOMICS CONSORTIUM AUTHOR 3 (SGC) REVDAT 5 30-AUG-23 3BRB 1 REMARK SEQADV LINK REVDAT 4 13-JUL-11 3BRB 1 VERSN REVDAT 3 19-MAY-10 3BRB 1 JRNL REVDAT 2 24-FEB-09 3BRB 1 VERSN REVDAT 1 22-JAN-08 3BRB 0 JRNL AUTH X.HUANG,P.FINERTY,J.R.WALKER,C.BUTLER-COLE,M.VEDADI, JRNL AUTH 2 M.SCHAPIRA,S.A.PARKER,B.E.TURK,D.A.THOMPSON,S.DHE-PAGANON JRNL TITL STRUCTURAL INSIGHTS INTO THE INHIBITED STATES OF THE MER JRNL TITL 2 RECEPTOR TYROSINE KINASE. JRNL REF J.STRUCT.BIOL. V. 165 88 2009 JRNL REFN ISSN 1047-8477 JRNL PMID 19028587 JRNL DOI 10.1016/J.JSB.2008.10.003 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.05 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 47038 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2487 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3073 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.63 REMARK 3 BIN R VALUE (WORKING SET) : 0.2590 REMARK 3 BIN FREE R VALUE SET COUNT : 164 REMARK 3 BIN FREE R VALUE : 0.2890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4126 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 67 REMARK 3 SOLVENT ATOMS : 232 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.06000 REMARK 3 B22 (A**2) : -2.51000 REMARK 3 B33 (A**2) : -3.39000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.38000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.147 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.144 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.130 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.805 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4361 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5917 ; 1.511 ; 1.994 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 540 ; 5.580 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 178 ;33.761 ;23.483 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 742 ;15.047 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 29 ;20.243 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 672 ; 0.103 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3219 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1995 ; 0.202 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2987 ; 0.306 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 248 ; 0.137 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 27 ; 0.173 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.121 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2766 ; 1.904 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4322 ; 2.686 ; 4.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1834 ; 3.602 ; 5.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1595 ; 4.712 ; 7.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 18 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 575 A 606 REMARK 3 ORIGIN FOR THE GROUP (A): -11.8716 26.3438 -21.0181 REMARK 3 T TENSOR REMARK 3 T11: -0.0494 T22: 0.1907 REMARK 3 T33: 0.1666 T12: -0.0125 REMARK 3 T13: -0.0083 T23: 0.0961 REMARK 3 L TENSOR REMARK 3 L11: 3.4725 L22: 8.9932 REMARK 3 L33: 7.2606 L12: -1.6076 REMARK 3 L13: -0.4733 L23: 1.3342 REMARK 3 S TENSOR REMARK 3 S11: -0.1176 S12: 0.0674 S13: 0.0053 REMARK 3 S21: 0.0930 S22: 0.2955 S23: 0.7421 REMARK 3 S31: 0.1052 S32: -0.6785 S33: -0.1779 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 607 A 621 REMARK 3 ORIGIN FOR THE GROUP (A): -6.4348 30.7325 -19.5926 REMARK 3 T TENSOR REMARK 3 T11: 0.0707 T22: 0.1762 REMARK 3 T33: 0.1237 T12: 0.0392 REMARK 3 T13: 0.0287 T23: 0.0402 REMARK 3 L TENSOR REMARK 3 L11: 6.2416 L22: 15.8338 REMARK 3 L33: 3.6536 L12: 4.7288 REMARK 3 L13: -0.1510 L23: 1.5430 REMARK 3 S TENSOR REMARK 3 S11: 0.2351 S12: -0.1484 S13: 0.2876 REMARK 3 S21: 0.5573 S22: -0.0974 S23: 0.7083 REMARK 3 S31: -0.6030 S32: -0.4804 S33: -0.1377 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 625 A 635 REMARK 3 ORIGIN FOR THE GROUP (A): -24.8347 23.3773 -8.6325 REMARK 3 T TENSOR REMARK 3 T11: 0.6050 T22: 0.6033 REMARK 3 T33: 0.6083 T12: -0.0022 REMARK 3 T13: -0.0014 T23: -0.0020 REMARK 3 L TENSOR REMARK 3 L11: 67.4254 L22: 6.5681 REMARK 3 L33: 0.5153 L12: 21.0442 REMARK 3 L13: 5.8942 L23: 1.8397 REMARK 3 S TENSOR REMARK 3 S11: -1.8756 S12: 5.5876 S13: 1.3724 REMARK 3 S21: 2.5128 S22: 2.2469 S23: 2.7951 REMARK 3 S31: 2.9387 S32: 1.4515 S33: -0.3713 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 636 A 658 REMARK 3 ORIGIN FOR THE GROUP (A): -8.2471 26.8768 -8.1713 REMARK 3 T TENSOR REMARK 3 T11: 0.0119 T22: 0.0988 REMARK 3 T33: 0.1107 T12: 0.0293 REMARK 3 T13: 0.0227 T23: -0.0147 REMARK 3 L TENSOR REMARK 3 L11: 8.9464 L22: 4.1104 REMARK 3 L33: 2.9765 L12: -3.8193 REMARK 3 L13: 3.2838 L23: -2.1175 REMARK 3 S TENSOR REMARK 3 S11: 0.0420 S12: 0.1384 S13: 0.1279 REMARK 3 S21: 0.1620 S22: 0.0179 S23: 0.3145 REMARK 3 S31: -0.2581 S32: -0.4046 S33: -0.0599 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 666 A 690 REMARK 3 ORIGIN FOR THE GROUP (A): 3.3322 14.3563 -18.3288 REMARK 3 T TENSOR REMARK 3 T11: 0.0656 T22: 0.1681 REMARK 3 T33: 0.0924 T12: -0.0331 REMARK 3 T13: -0.0160 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 2.4342 L22: 5.3915 REMARK 3 L33: 1.1153 L12: -1.6821 REMARK 3 L13: -0.9270 L23: 0.5682 REMARK 3 S TENSOR REMARK 3 S11: 0.0727 S12: 0.1972 S13: 0.1528 REMARK 3 S21: -0.2979 S22: 0.0191 S23: -0.2911 REMARK 3 S31: 0.1065 S32: -0.0969 S33: -0.0917 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 691 A 719 REMARK 3 ORIGIN FOR THE GROUP (A): 5.4553 15.7983 -3.2850 REMARK 3 T TENSOR REMARK 3 T11: 0.0750 T22: 0.1605 REMARK 3 T33: 0.1445 T12: -0.0276 REMARK 3 T13: -0.0316 T23: -0.0055 REMARK 3 L TENSOR REMARK 3 L11: 2.8619 L22: 3.0514 REMARK 3 L33: 3.1904 L12: 0.2406 REMARK 3 L13: -0.4137 L23: 0.5140 REMARK 3 S TENSOR REMARK 3 S11: -0.0802 S12: 0.1142 S13: 0.0660 REMARK 3 S21: 0.1958 S22: 0.0846 S23: -0.1522 REMARK 3 S31: -0.0506 S32: 0.1140 S33: -0.0044 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 720 A 805 REMARK 3 ORIGIN FOR THE GROUP (A): -3.0481 7.8025 -5.9486 REMARK 3 T TENSOR REMARK 3 T11: 0.0132 T22: 0.1700 REMARK 3 T33: 0.1549 T12: 0.0060 REMARK 3 T13: -0.0143 T23: 0.0012 REMARK 3 L TENSOR REMARK 3 L11: 1.0214 L22: 2.9081 REMARK 3 L33: 2.1904 L12: -0.2060 REMARK 3 L13: -0.1786 L23: 0.5996 REMARK 3 S TENSOR REMARK 3 S11: 0.0050 S12: -0.0086 S13: 0.0026 REMARK 3 S21: 0.0056 S22: 0.0142 S23: 0.2897 REMARK 3 S31: -0.0524 S32: -0.2194 S33: -0.0192 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 806 A 827 REMARK 3 ORIGIN FOR THE GROUP (A): 0.3258 -5.9646 -2.4297 REMARK 3 T TENSOR REMARK 3 T11: 0.1751 T22: 0.0992 REMARK 3 T33: 0.1030 T12: 0.0018 REMARK 3 T13: -0.0053 T23: 0.0143 REMARK 3 L TENSOR REMARK 3 L11: 4.3005 L22: 5.1158 REMARK 3 L33: 2.8967 L12: 1.8270 REMARK 3 L13: 1.5030 L23: 2.3674 REMARK 3 S TENSOR REMARK 3 S11: -0.0229 S12: 0.2460 S13: -0.3472 REMARK 3 S21: 0.4085 S22: 0.1208 S23: 0.0314 REMARK 3 S31: 0.4517 S32: 0.0610 S33: -0.0979 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 828 A 861 REMARK 3 ORIGIN FOR THE GROUP (A): 5.6600 7.0142 5.6912 REMARK 3 T TENSOR REMARK 3 T11: 0.0948 T22: 0.1259 REMARK 3 T33: 0.0708 T12: 0.0112 REMARK 3 T13: -0.0407 T23: -0.0128 REMARK 3 L TENSOR REMARK 3 L11: 2.8619 L22: 2.3958 REMARK 3 L33: 2.7518 L12: 0.7029 REMARK 3 L13: -0.2281 L23: 0.4418 REMARK 3 S TENSOR REMARK 3 S11: 0.0408 S12: -0.1069 S13: -0.0398 REMARK 3 S21: 0.2730 S22: 0.0454 S23: -0.1664 REMARK 3 S31: 0.0692 S32: 0.1896 S33: -0.0862 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 575 B 597 REMARK 3 ORIGIN FOR THE GROUP (A): -12.9456 -29.6785 -22.1305 REMARK 3 T TENSOR REMARK 3 T11: 0.0442 T22: 0.1788 REMARK 3 T33: 0.1235 T12: -0.0422 REMARK 3 T13: -0.0595 T23: 0.0726 REMARK 3 L TENSOR REMARK 3 L11: 3.9509 L22: 9.1371 REMARK 3 L33: 6.9062 L12: 1.0434 REMARK 3 L13: -0.1683 L23: 3.4259 REMARK 3 S TENSOR REMARK 3 S11: -0.0513 S12: 0.3481 S13: -0.1538 REMARK 3 S21: -0.6020 S22: 0.2786 S23: 0.4148 REMARK 3 S31: -0.1170 S32: -0.7063 S33: -0.2272 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 598 B 619 REMARK 3 ORIGIN FOR THE GROUP (A): -7.2384 -29.9336 -17.8358 REMARK 3 T TENSOR REMARK 3 T11: 0.0755 T22: 0.1742 REMARK 3 T33: 0.1434 T12: -0.0309 REMARK 3 T13: -0.0242 T23: 0.0342 REMARK 3 L TENSOR REMARK 3 L11: 2.2201 L22: 9.7697 REMARK 3 L33: 6.8298 L12: -0.1364 REMARK 3 L13: 1.2352 L23: -0.5290 REMARK 3 S TENSOR REMARK 3 S11: -0.1651 S12: 0.0250 S13: 0.0162 REMARK 3 S21: -0.1882 S22: 0.2377 S23: 0.2072 REMARK 3 S31: 0.0331 S32: -0.2357 S33: -0.0726 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 620 B 635 REMARK 3 ORIGIN FOR THE GROUP (A): -18.1249 -25.2328 -35.2775 REMARK 3 T TENSOR REMARK 3 T11: 0.0149 T22: 0.0746 REMARK 3 T33: 0.1063 T12: 0.0555 REMARK 3 T13: -0.1602 T23: 0.0399 REMARK 3 L TENSOR REMARK 3 L11: 5.8324 L22: 3.4911 REMARK 3 L33: 9.7395 L12: -0.1540 REMARK 3 L13: 1.4831 L23: 5.6746 REMARK 3 S TENSOR REMARK 3 S11: -0.3233 S12: 0.6450 S13: -0.0948 REMARK 3 S21: -0.6948 S22: -0.2566 S23: 0.7397 REMARK 3 S31: -1.0756 S32: -0.1570 S33: 0.5799 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 636 B 651 REMARK 3 ORIGIN FOR THE GROUP (A): 0.4905 -28.1460 -32.1053 REMARK 3 T TENSOR REMARK 3 T11: 0.0780 T22: 0.0946 REMARK 3 T33: 0.0688 T12: -0.0232 REMARK 3 T13: -0.0118 T23: -0.0429 REMARK 3 L TENSOR REMARK 3 L11: 8.7686 L22: 2.8345 REMARK 3 L33: 2.8436 L12: 3.5593 REMARK 3 L13: 3.9762 L23: 0.4114 REMARK 3 S TENSOR REMARK 3 S11: 0.0317 S12: 0.3616 S13: -0.3815 REMARK 3 S21: -0.2848 S22: 0.0783 S23: -0.0177 REMARK 3 S31: 0.4225 S32: -0.2757 S33: -0.1100 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 652 B 674 REMARK 3 ORIGIN FOR THE GROUP (A): -13.5556 -27.2389 -24.9995 REMARK 3 T TENSOR REMARK 3 T11: -0.0803 T22: 0.2162 REMARK 3 T33: 0.1570 T12: -0.0187 REMARK 3 T13: -0.0438 T23: 0.0570 REMARK 3 L TENSOR REMARK 3 L11: 5.9533 L22: 3.7373 REMARK 3 L33: 3.8832 L12: 0.4495 REMARK 3 L13: 2.3467 L23: 3.3628 REMARK 3 S TENSOR REMARK 3 S11: -0.0075 S12: -0.0074 S13: -0.0070 REMARK 3 S21: -0.0561 S22: -0.2689 S23: 0.8843 REMARK 3 S31: -0.0675 S32: -0.8259 S33: 0.2764 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 675 B 691 REMARK 3 ORIGIN FOR THE GROUP (A): 7.4924 -11.7273 -12.8102 REMARK 3 T TENSOR REMARK 3 T11: 0.0373 T22: 0.1361 REMARK 3 T33: 0.0816 T12: 0.0199 REMARK 3 T13: -0.0080 T23: -0.0107 REMARK 3 L TENSOR REMARK 3 L11: 2.0956 L22: 10.5841 REMARK 3 L33: 3.6994 L12: 0.7018 REMARK 3 L13: 2.5107 L23: 3.5156 REMARK 3 S TENSOR REMARK 3 S11: 0.1778 S12: -0.2272 S13: 0.0336 REMARK 3 S21: 0.7788 S22: 0.1235 S23: -0.3047 REMARK 3 S31: 0.2634 S32: -0.0301 S33: -0.3013 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 692 B 719 REMARK 3 ORIGIN FOR THE GROUP (A): 11.7713 -17.2558 -28.1945 REMARK 3 T TENSOR REMARK 3 T11: 0.0360 T22: 0.1664 REMARK 3 T33: 0.1744 T12: 0.0199 REMARK 3 T13: -0.0030 T23: -0.0094 REMARK 3 L TENSOR REMARK 3 L11: 3.2197 L22: 2.8489 REMARK 3 L33: 3.9067 L12: -0.0787 REMARK 3 L13: 0.6343 L23: 0.0515 REMARK 3 S TENSOR REMARK 3 S11: -0.0076 S12: -0.0851 S13: -0.0757 REMARK 3 S21: -0.0461 S22: 0.0868 S23: -0.2292 REMARK 3 S31: -0.0877 S32: 0.1450 S33: -0.0792 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 720 B 851 REMARK 3 ORIGIN FOR THE GROUP (A): 5.6818 -6.1885 -31.8932 REMARK 3 T TENSOR REMARK 3 T11: 0.0235 T22: 0.1350 REMARK 3 T33: 0.1242 T12: 0.0206 REMARK 3 T13: -0.0143 T23: 0.0036 REMARK 3 L TENSOR REMARK 3 L11: 1.0453 L22: 1.9637 REMARK 3 L33: 1.8566 L12: -0.2068 REMARK 3 L13: -0.2205 L23: 0.4103 REMARK 3 S TENSOR REMARK 3 S11: 0.0733 S12: 0.0569 S13: 0.0747 REMARK 3 S21: -0.1813 S22: 0.0447 S23: 0.0366 REMARK 3 S31: -0.2156 S32: -0.0428 S33: -0.1180 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 852 B 863 REMARK 3 ORIGIN FOR THE GROUP (A): 24.0348 -14.5100 -29.6280 REMARK 3 T TENSOR REMARK 3 T11: -0.0500 T22: 0.1973 REMARK 3 T33: 0.0825 T12: 0.0798 REMARK 3 T13: -0.0653 T23: -0.0721 REMARK 3 L TENSOR REMARK 3 L11: 11.6290 L22: 3.0038 REMARK 3 L33: 9.6532 L12: 0.3253 REMARK 3 L13: 0.4308 L23: -0.8625 REMARK 3 S TENSOR REMARK 3 S11: 0.0312 S12: -0.9021 S13: 0.1376 REMARK 3 S21: 0.8046 S22: -0.0291 S23: -0.6807 REMARK 3 S31: 0.7449 S32: 1.0720 S33: -0.0021 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: ATOM RECORD CONTAINS SUM OF TLS AND REMARK 3 RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND REMARK 3 RESIDUAL U FACTORS REMARK 4 REMARK 4 3BRB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-DEC-07. REMARK 100 THE DEPOSITION ID IS D_1000045870. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUL-07 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91790 REMARK 200 MONOCHROMATOR : HORIZONTAL BENT SI(111), REMARK 200 ASYMMETRICALLY CUT WITH WATER- REMARK 200 COOLED CU BLOCK REMARK 200 OPTICS : RH COATED SI MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49802 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 25.050 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09000 REMARK 200 FOR THE DATA SET : 24.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.65900 REMARK 200 FOR SHELL : 2.393 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2P0C REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MER PROTEIN (38 MG/ML) WAS PRE REMARK 280 -INCUBATED WITH 2.5 MM ATP AND 10 MM MGCL2 FOR 3 HOURS AT ROOM REMARK 280 TEMPERATURE. CRYSTALS WERE OBTAINED AT 290K AGAINST 29% PEG 400, REMARK 280 0.2M MGCL2, AND 0.1 M TRIS-HCL PH 8.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 44.94000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 552 REMARK 465 GLY A 553 REMARK 465 SER A 554 REMARK 465 SER A 555 REMARK 465 HIS A 556 REMARK 465 HIS A 557 REMARK 465 HIS A 558 REMARK 465 HIS A 559 REMARK 465 HIS A 560 REMARK 465 HIS A 561 REMARK 465 SER A 562 REMARK 465 SER A 563 REMARK 465 GLY A 564 REMARK 465 LEU A 565 REMARK 465 VAL A 566 REMARK 465 PRO A 567 REMARK 465 ARG A 568 REMARK 465 GLY A 569 REMARK 465 SER A 570 REMARK 465 GLU A 571 REMARK 465 GLU A 572 REMARK 465 LEU A 573 REMARK 465 GLN A 574 REMARK 465 GLY A 596 REMARK 465 LYS A 622 REMARK 465 LEU A 623 REMARK 465 ASP A 624 REMARK 465 MET A 659 REMARK 465 SER A 660 REMARK 465 SER A 661 REMARK 465 GLN A 662 REMARK 465 GLY A 663 REMARK 465 ILE A 664 REMARK 465 PRO A 665 REMARK 465 LYS A 746 REMARK 465 LYS A 747 REMARK 465 ILE A 748 REMARK 465 TYR A 749 REMARK 465 SER A 750 REMARK 465 GLY A 751 REMARK 465 ASP A 752 REMARK 465 TYR A 753 REMARK 465 TYR A 754 REMARK 465 ARG A 755 REMARK 465 GLN A 756 REMARK 465 GLY A 757 REMARK 465 ARG A 758 REMARK 465 ILE A 759 REMARK 465 ALA A 760 REMARK 465 LYS A 761 REMARK 465 PRO A 862 REMARK 465 ASP A 863 REMARK 465 VAL A 864 REMARK 465 MET B 552 REMARK 465 GLY B 553 REMARK 465 SER B 554 REMARK 465 SER B 555 REMARK 465 HIS B 556 REMARK 465 HIS B 557 REMARK 465 HIS B 558 REMARK 465 HIS B 559 REMARK 465 HIS B 560 REMARK 465 HIS B 561 REMARK 465 SER B 562 REMARK 465 SER B 563 REMARK 465 GLY B 564 REMARK 465 LEU B 565 REMARK 465 VAL B 566 REMARK 465 PRO B 567 REMARK 465 ARG B 568 REMARK 465 GLY B 569 REMARK 465 SER B 570 REMARK 465 GLU B 571 REMARK 465 GLU B 572 REMARK 465 LEU B 573 REMARK 465 GLN B 574 REMARK 465 SER B 745 REMARK 465 LYS B 746 REMARK 465 LYS B 747 REMARK 465 ILE B 748 REMARK 465 TYR B 749 REMARK 465 SER B 750 REMARK 465 GLY B 751 REMARK 465 ASP B 752 REMARK 465 TYR B 753 REMARK 465 TYR B 754 REMARK 465 ARG B 755 REMARK 465 GLN B 756 REMARK 465 GLY B 757 REMARK 465 ARG B 758 REMARK 465 ILE B 759 REMARK 465 ALA B 760 REMARK 465 LYS B 761 REMARK 465 MET B 762 REMARK 465 VAL B 864 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 575 CG OD1 ND2 REMARK 470 LYS A 576 CD CE NZ REMARK 470 LEU A 577 CB CG CD1 CD2 REMARK 470 GLU A 578 CG CD OE1 OE2 REMARK 470 ASP A 579 CG OD1 OD2 REMARK 470 GLU A 597 CG CD OE1 OE2 REMARK 470 PHE A 598 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER A 626 OG REMARK 470 GLN A 628 CG CD OE1 NE2 REMARK 470 ARG A 629 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 631 CD1 REMARK 470 GLU A 632 CG CD OE1 OE2 REMARK 470 LYS A 666 CG CD CE NZ REMARK 470 LYS A 693 CG CD CE NZ REMARK 470 MET A 762 CG SD CE REMARK 470 ASP A 774 CG OD1 OD2 REMARK 470 ARG A 775 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 856 CD CE NZ REMARK 470 ASN B 575 CG OD1 ND2 REMARK 470 LYS B 576 CD CE NZ REMARK 470 LEU B 577 CB CG CD1 CD2 REMARK 470 GLU B 578 CG CD OE1 OE2 REMARK 470 LYS B 591 CG CD CE NZ REMARK 470 GLU B 597 CG CD OE1 OE2 REMARK 470 PHE B 598 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 607 CG CD CE NZ REMARK 470 GLU B 609 CG CD OE1 OE2 REMARK 470 LYS B 622 CE NZ REMARK 470 ARG B 629 CG CD NE CZ NH1 NH2 REMARK 470 ILE B 631 CD1 REMARK 470 GLU B 632 CG CD OE1 OE2 REMARK 470 GLU B 633 OE1 OE2 REMARK 470 GLN B 662 CG CD OE1 NE2 REMARK 470 ILE B 664 CG1 CG2 CD1 REMARK 470 LYS B 666 CG CD CE NZ REMARK 470 LYS B 693 CG CD CE NZ REMARK 470 ASP B 774 CG OD1 OD2 REMARK 470 ARG B 775 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 824 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 577 42.95 -84.15 REMARK 500 THR A 690 -7.13 70.32 REMARK 500 ASP A 723 43.10 -160.21 REMARK 500 ALA A 725 158.57 177.71 REMARK 500 LEU A 744 -3.15 71.82 REMARK 500 PHE B 598 -1.65 -152.84 REMARK 500 THR B 690 -2.84 77.00 REMARK 500 ASP B 723 43.29 -155.33 REMARK 500 ARG B 775 -20.32 73.68 REMARK 500 VAL B 776 135.85 -33.57 REMARK 500 PRO B 862 150.46 -49.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 10 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 20 O REMARK 620 2 HOH A 240 O 169.3 REMARK 620 3 ASN A 728 OD1 80.5 91.9 REMARK 620 4 ASP A 741 OD2 78.0 94.4 87.9 REMARK 620 5 ADP A 901 O1A 93.0 93.9 171.6 85.5 REMARK 620 6 ADP A 901 O2B 80.6 107.2 90.8 158.4 93.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 9 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 238 O REMARK 620 2 HOH B 239 O 174.5 REMARK 620 3 ASN B 728 ND2 96.4 84.5 REMARK 620 4 ASP B 741 OD2 89.2 85.4 95.1 REMARK 620 5 ADP B 901 O1A 89.3 89.3 172.8 80.7 REMARK 620 6 ADP B 901 O2B 94.7 90.7 89.8 173.4 93.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 8 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 9 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 10 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP B 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2P0C RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CATALYTIC DOMAIN OF THE PROTO-ONCOGENE REMARK 900 TYROSINE-PROTEIN KINASE MER REMARK 900 RELATED ID: 3BPR RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CATALYTIC DOMAIN OF THE PROTO-ONCOGENE REMARK 900 TYROSINE-PROTEIN KINASE MER IN COMPLEX WITH INHIBITOR C52 DBREF 3BRB A 570 864 UNP Q12866 MERTK_HUMAN 574 868 DBREF 3BRB B 570 864 UNP Q12866 MERTK_HUMAN 574 868 SEQADV 3BRB MET A 552 UNP Q12866 EXPRESSION TAG SEQADV 3BRB GLY A 553 UNP Q12866 EXPRESSION TAG SEQADV 3BRB SER A 554 UNP Q12866 EXPRESSION TAG SEQADV 3BRB SER A 555 UNP Q12866 EXPRESSION TAG SEQADV 3BRB HIS A 556 UNP Q12866 EXPRESSION TAG SEQADV 3BRB HIS A 557 UNP Q12866 EXPRESSION TAG SEQADV 3BRB HIS A 558 UNP Q12866 EXPRESSION TAG SEQADV 3BRB HIS A 559 UNP Q12866 EXPRESSION TAG SEQADV 3BRB HIS A 560 UNP Q12866 EXPRESSION TAG SEQADV 3BRB HIS A 561 UNP Q12866 EXPRESSION TAG SEQADV 3BRB SER A 562 UNP Q12866 EXPRESSION TAG SEQADV 3BRB SER A 563 UNP Q12866 EXPRESSION TAG SEQADV 3BRB GLY A 564 UNP Q12866 EXPRESSION TAG SEQADV 3BRB LEU A 565 UNP Q12866 EXPRESSION TAG SEQADV 3BRB VAL A 566 UNP Q12866 EXPRESSION TAG SEQADV 3BRB PRO A 567 UNP Q12866 EXPRESSION TAG SEQADV 3BRB ARG A 568 UNP Q12866 EXPRESSION TAG SEQADV 3BRB GLY A 569 UNP Q12866 EXPRESSION TAG SEQADV 3BRB MET B 552 UNP Q12866 EXPRESSION TAG SEQADV 3BRB GLY B 553 UNP Q12866 EXPRESSION TAG SEQADV 3BRB SER B 554 UNP Q12866 EXPRESSION TAG SEQADV 3BRB SER B 555 UNP Q12866 EXPRESSION TAG SEQADV 3BRB HIS B 556 UNP Q12866 EXPRESSION TAG SEQADV 3BRB HIS B 557 UNP Q12866 EXPRESSION TAG SEQADV 3BRB HIS B 558 UNP Q12866 EXPRESSION TAG SEQADV 3BRB HIS B 559 UNP Q12866 EXPRESSION TAG SEQADV 3BRB HIS B 560 UNP Q12866 EXPRESSION TAG SEQADV 3BRB HIS B 561 UNP Q12866 EXPRESSION TAG SEQADV 3BRB SER B 562 UNP Q12866 EXPRESSION TAG SEQADV 3BRB SER B 563 UNP Q12866 EXPRESSION TAG SEQADV 3BRB GLY B 564 UNP Q12866 EXPRESSION TAG SEQADV 3BRB LEU B 565 UNP Q12866 EXPRESSION TAG SEQADV 3BRB VAL B 566 UNP Q12866 EXPRESSION TAG SEQADV 3BRB PRO B 567 UNP Q12866 EXPRESSION TAG SEQADV 3BRB ARG B 568 UNP Q12866 EXPRESSION TAG SEQADV 3BRB GLY B 569 UNP Q12866 EXPRESSION TAG SEQRES 1 A 313 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 313 LEU VAL PRO ARG GLY SER GLU GLU LEU GLN ASN LYS LEU SEQRES 3 A 313 GLU ASP VAL VAL ILE ASP ARG ASN LEU LEU ILE LEU GLY SEQRES 4 A 313 LYS ILE LEU GLY GLU GLY GLU PHE GLY SER VAL MET GLU SEQRES 5 A 313 GLY ASN LEU LYS GLN GLU ASP GLY THR SER LEU LYS VAL SEQRES 6 A 313 ALA VAL LYS THR MET LYS LEU ASP ASN SER SER GLN ARG SEQRES 7 A 313 GLU ILE GLU GLU PHE LEU SER GLU ALA ALA CYS MET LYS SEQRES 8 A 313 ASP PHE SER HIS PRO ASN VAL ILE ARG LEU LEU GLY VAL SEQRES 9 A 313 CYS ILE GLU MET SER SER GLN GLY ILE PRO LYS PRO MET SEQRES 10 A 313 VAL ILE LEU PRO PHE MET LYS TYR GLY ASP LEU HIS THR SEQRES 11 A 313 TYR LEU LEU TYR SER ARG LEU GLU THR GLY PRO LYS HIS SEQRES 12 A 313 ILE PRO LEU GLN THR LEU LEU LYS PHE MET VAL ASP ILE SEQRES 13 A 313 ALA LEU GLY MET GLU TYR LEU SER ASN ARG ASN PHE LEU SEQRES 14 A 313 HIS ARG ASP LEU ALA ALA ARG ASN CYS MET LEU ARG ASP SEQRES 15 A 313 ASP MET THR VAL CYS VAL ALA ASP PHE GLY LEU SER LYS SEQRES 16 A 313 LYS ILE TYR SER GLY ASP TYR TYR ARG GLN GLY ARG ILE SEQRES 17 A 313 ALA LYS MET PRO VAL LYS TRP ILE ALA ILE GLU SER LEU SEQRES 18 A 313 ALA ASP ARG VAL TYR THR SER LYS SER ASP VAL TRP ALA SEQRES 19 A 313 PHE GLY VAL THR MET TRP GLU ILE ALA THR ARG GLY MET SEQRES 20 A 313 THR PRO TYR PRO GLY VAL GLN ASN HIS GLU MET TYR ASP SEQRES 21 A 313 TYR LEU LEU HIS GLY HIS ARG LEU LYS GLN PRO GLU ASP SEQRES 22 A 313 CYS LEU ASP GLU LEU TYR GLU ILE MET TYR SER CYS TRP SEQRES 23 A 313 ARG THR ASP PRO LEU ASP ARG PRO THR PHE SER VAL LEU SEQRES 24 A 313 ARG LEU GLN LEU GLU LYS LEU LEU GLU SER LEU PRO ASP SEQRES 25 A 313 VAL SEQRES 1 B 313 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 313 LEU VAL PRO ARG GLY SER GLU GLU LEU GLN ASN LYS LEU SEQRES 3 B 313 GLU ASP VAL VAL ILE ASP ARG ASN LEU LEU ILE LEU GLY SEQRES 4 B 313 LYS ILE LEU GLY GLU GLY GLU PHE GLY SER VAL MET GLU SEQRES 5 B 313 GLY ASN LEU LYS GLN GLU ASP GLY THR SER LEU LYS VAL SEQRES 6 B 313 ALA VAL LYS THR MET LYS LEU ASP ASN SER SER GLN ARG SEQRES 7 B 313 GLU ILE GLU GLU PHE LEU SER GLU ALA ALA CYS MET LYS SEQRES 8 B 313 ASP PHE SER HIS PRO ASN VAL ILE ARG LEU LEU GLY VAL SEQRES 9 B 313 CYS ILE GLU MET SER SER GLN GLY ILE PRO LYS PRO MET SEQRES 10 B 313 VAL ILE LEU PRO PHE MET LYS TYR GLY ASP LEU HIS THR SEQRES 11 B 313 TYR LEU LEU TYR SER ARG LEU GLU THR GLY PRO LYS HIS SEQRES 12 B 313 ILE PRO LEU GLN THR LEU LEU LYS PHE MET VAL ASP ILE SEQRES 13 B 313 ALA LEU GLY MET GLU TYR LEU SER ASN ARG ASN PHE LEU SEQRES 14 B 313 HIS ARG ASP LEU ALA ALA ARG ASN CYS MET LEU ARG ASP SEQRES 15 B 313 ASP MET THR VAL CYS VAL ALA ASP PHE GLY LEU SER LYS SEQRES 16 B 313 LYS ILE TYR SER GLY ASP TYR TYR ARG GLN GLY ARG ILE SEQRES 17 B 313 ALA LYS MET PRO VAL LYS TRP ILE ALA ILE GLU SER LEU SEQRES 18 B 313 ALA ASP ARG VAL TYR THR SER LYS SER ASP VAL TRP ALA SEQRES 19 B 313 PHE GLY VAL THR MET TRP GLU ILE ALA THR ARG GLY MET SEQRES 20 B 313 THR PRO TYR PRO GLY VAL GLN ASN HIS GLU MET TYR ASP SEQRES 21 B 313 TYR LEU LEU HIS GLY HIS ARG LEU LYS GLN PRO GLU ASP SEQRES 22 B 313 CYS LEU ASP GLU LEU TYR GLU ILE MET TYR SER CYS TRP SEQRES 23 B 313 ARG THR ASP PRO LEU ASP ARG PRO THR PHE SER VAL LEU SEQRES 24 B 313 ARG LEU GLN LEU GLU LYS LEU LEU GLU SER LEU PRO ASP SEQRES 25 B 313 VAL HET CL A 4 1 HET CL A 5 1 HET MG A 10 1 HET ADP A 901 27 HET GOL A 3 6 HET CL B 6 1 HET CL B 7 1 HET CL B 8 1 HET MG B 9 1 HET ADP B 901 27 HETNAM CL CHLORIDE ION HETNAM MG MAGNESIUM ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 CL 5(CL 1-) FORMUL 5 MG 2(MG 2+) FORMUL 6 ADP 2(C10 H15 N5 O10 P2) FORMUL 7 GOL C3 H8 O3 FORMUL 13 HOH *232(H2 O) HELIX 1 1 ASP A 583 ASN A 585 5 3 HELIX 2 2 SER A 627 ASP A 643 1 17 HELIX 3 3 ASP A 678 SER A 686 1 9 HELIX 4 4 PRO A 696 ASN A 716 1 21 HELIX 5 5 ALA A 725 ARG A 727 5 3 HELIX 6 6 PRO A 763 ILE A 767 5 5 HELIX 7 7 ALA A 768 ASP A 774 1 7 HELIX 8 8 THR A 778 THR A 795 1 18 HELIX 9 9 GLN A 805 HIS A 807 5 3 HELIX 10 10 GLU A 808 HIS A 815 1 8 HELIX 11 11 LEU A 826 CYS A 836 1 11 HELIX 12 12 ASP A 840 ARG A 844 5 5 HELIX 13 13 THR A 846 LEU A 861 1 16 HELIX 14 14 ASP B 583 ASN B 585 5 3 HELIX 15 15 SER B 627 PHE B 644 1 18 HELIX 16 16 ASP B 678 SER B 686 1 9 HELIX 17 17 PRO B 696 ARG B 717 1 22 HELIX 18 18 ALA B 725 ARG B 727 5 3 HELIX 19 19 PRO B 763 ILE B 767 5 5 HELIX 20 20 ALA B 768 ARG B 775 1 8 HELIX 21 21 THR B 778 THR B 795 1 18 HELIX 22 22 GLN B 805 HIS B 807 5 3 HELIX 23 23 GLU B 808 HIS B 815 1 8 HELIX 24 24 LEU B 826 CYS B 836 1 11 HELIX 25 25 ASP B 840 ARG B 844 5 5 HELIX 26 26 THR B 846 LEU B 861 1 16 SHEET 1 A 5 LEU A 587 GLY A 594 0 SHEET 2 A 5 VAL A 601 LYS A 607 -1 O VAL A 601 N LEU A 593 SHEET 3 A 5 SER A 613 THR A 620 -1 O LEU A 614 N LEU A 606 SHEET 4 A 5 MET A 668 PRO A 672 -1 O VAL A 669 N LYS A 619 SHEET 5 A 5 GLY A 654 CYS A 656 -1 N CYS A 656 O MET A 668 SHEET 1 B 2 CYS A 729 LEU A 731 0 SHEET 2 B 2 VAL A 737 VAL A 739 -1 O CYS A 738 N MET A 730 SHEET 1 C 5 LEU B 587 GLU B 595 0 SHEET 2 C 5 SER B 600 LYS B 607 -1 O VAL B 601 N LEU B 593 SHEET 3 C 5 SER B 613 THR B 620 -1 O VAL B 618 N MET B 602 SHEET 4 C 5 LYS B 666 PRO B 672 -1 O VAL B 669 N LYS B 619 SHEET 5 C 5 GLY B 654 GLU B 658 -1 N GLU B 658 O LYS B 666 SHEET 1 D 2 CYS B 729 LEU B 731 0 SHEET 2 D 2 VAL B 737 VAL B 739 -1 O CYS B 738 N MET B 730 LINK MG MG A 10 O HOH A 20 1555 1555 2.20 LINK MG MG A 10 O HOH A 240 1555 1555 2.03 LINK MG MG A 10 OD1 ASN A 728 1555 1555 2.17 LINK MG MG A 10 OD2 ASP A 741 1555 1555 2.15 LINK MG MG A 10 O1A ADP A 901 1555 1555 2.16 LINK MG MG A 10 O2B ADP A 901 1555 1555 2.15 LINK MG MG B 9 O HOH B 238 1555 1555 2.06 LINK MG MG B 9 O HOH B 239 1555 1555 2.15 LINK MG MG B 9 ND2 ASN B 728 1555 1555 1.99 LINK MG MG B 9 OD2 ASP B 741 1555 1555 2.14 LINK MG MG B 9 O1A ADP B 901 1555 1555 2.18 LINK MG MG B 9 O2B ADP B 901 1555 1555 2.14 SITE 1 AC1 4 HOH A 211 ARG A 687 MET A 798 ARG B 687 SITE 1 AC2 2 HOH A 37 LYS A 820 SITE 1 AC3 2 ARG B 584 LEU B 589 SITE 1 AC4 1 LYS B 820 SITE 1 AC5 3 ARG B 651 PRO B 672 ARG B 732 SITE 1 AC6 5 HOH B 238 HOH B 239 ASN B 728 ASP B 741 SITE 2 AC6 5 ADP B 901 SITE 1 AC7 5 HOH A 20 HOH A 240 ASN A 728 ASP A 741 SITE 2 AC7 5 ADP A 901 SITE 1 AC8 17 MG A 10 HOH A 20 HOH A 21 HOH A 38 SITE 2 AC8 17 HOH A 99 HOH A 240 LEU A 593 VAL A 601 SITE 3 AC8 17 ALA A 617 LYS A 619 PRO A 672 PHE A 673 SITE 4 AC8 17 MET A 674 ASP A 678 ARG A 727 ASN A 728 SITE 5 AC8 17 ASP A 741 SITE 1 AC9 18 MG B 9 HOH B 65 HOH B 96 HOH B 189 SITE 2 AC9 18 HOH B 235 HOH B 238 HOH B 239 LEU B 593 SITE 3 AC9 18 VAL B 601 ALA B 617 LYS B 619 PRO B 672 SITE 4 AC9 18 PHE B 673 MET B 674 ASP B 678 ARG B 727 SITE 5 AC9 18 ASN B 728 ASP B 741 SITE 1 BC1 5 ARG A 818 LYS A 820 GLN A 821 TYR A 830 SITE 2 BC1 5 THR B 690 CRYST1 53.385 89.880 69.537 90.00 103.09 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018732 0.000000 0.004357 0.00000 SCALE2 0.000000 0.011126 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014765 0.00000