HEADER SIGNALING PROTEIN 21-DEC-07 3BRE TITLE CRYSTAL STRUCTURE OF P.AERUGINOSA PA3702 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE TWO-COMPONENT RESPONSE REGULATOR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PAO1; SOURCE 5 GENE: WSPR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21A KEYWDS PROTEIN-NUCLEOTIDE COMPLEX, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.DE,M.PIRRUCCELLO,P.V.KRASTEVA,N.BAE,R.V.RAGHAVAN,H.SONDERMANN REVDAT 6 30-AUG-23 3BRE 1 REMARK SEQADV HETSYN REVDAT 5 25-OCT-17 3BRE 1 REMARK REVDAT 4 13-JUL-11 3BRE 1 VERSN REVDAT 3 06-OCT-09 3BRE 1 HETATM REVDAT 2 24-FEB-09 3BRE 1 VERSN REVDAT 1 01-APR-08 3BRE 0 JRNL AUTH N.DE,M.PIRRUCCELLO,P.V.KRASTEVA,N.BAE,R.V.RAGHAVAN, JRNL AUTH 2 H.SONDERMANN JRNL TITL PHOSPHORYLATION-INDEPENDENT REGULATION OF THE DIGUANYLATE JRNL TITL 2 CYCLASE WSPR. JRNL REF PLOS BIOL. V. 6 E67 2008 JRNL REFN ISSN 1544-9173 JRNL PMID 18366254 JRNL DOI 10.1371/JOURNAL.PBIO.0060067 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 84696.500 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 91.5 REMARK 3 NUMBER OF REFLECTIONS : 37059 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.242 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.300 REMARK 3 FREE R VALUE TEST SET COUNT : 2707 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.55 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 77.10 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4801 REMARK 3 BIN R VALUE (WORKING SET) : 0.3630 REMARK 3 BIN FREE R VALUE : 0.3910 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 7.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 372 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4996 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 186 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 67.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.07000 REMARK 3 B22 (A**2) : 7.92000 REMARK 3 B33 (A**2) : -3.85000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -15.11000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.38 REMARK 3 ESD FROM SIGMAA (A) : 0.47 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.44 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.52 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.880 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.370 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.370 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.960 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.960 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 45.73 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CDG.PAR REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : CDG.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 3BRE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-DEC-07. REMARK 100 THE DEPOSITION ID IS D_1000045873. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-NOV-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9771 REMARK 200 MONOCHROMATOR : HORIZONTAL FOCUSING 5.05 REMARK 200 ASYMMETRIC CUT SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40110 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.390 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : 0.04900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.39 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.45900 REMARK 200 R SYM FOR SHELL (I) : 0.45900 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1W25 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-CL PH8.0, 2.9M NACL, 15% REMARK 280 XYLITOL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 72.25500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.37400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 72.25500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 36.37400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: TWO C2-CRYSTAL SYMMETRY-RELATED DIMERS (CHAINS A,B) FORM A REMARK 300 BIOLOGICAL UNIT (TETRAMER) REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3040 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 2 REMARK 465 ASN A 3 REMARK 465 PRO A 4 REMARK 465 HIS A 5 REMARK 465 GLU A 6 REMARK 465 SER A 7 REMARK 465 LYS A 8 REMARK 465 THR A 9 REMARK 465 ASP A 10 REMARK 465 LEU A 11 REMARK 465 GLY A 12 REMARK 465 ALA A 13 REMARK 465 PRO A 14 REMARK 465 LEU A 15 REMARK 465 ASP A 16 REMARK 465 GLY A 17 REMARK 465 PRO A 340 REMARK 465 VAL A 341 REMARK 465 PRO A 342 REMARK 465 PRO A 343 REMARK 465 ALA A 344 REMARK 465 PRO A 345 REMARK 465 ALA A 346 REMARK 465 GLY A 347 REMARK 465 ALA A 348 REMARK 465 ALA A 349 REMARK 465 ALA A 350 REMARK 465 LEU A 351 REMARK 465 GLU A 352 REMARK 465 HIS A 353 REMARK 465 HIS A 354 REMARK 465 HIS A 355 REMARK 465 HIS A 356 REMARK 465 HIS A 357 REMARK 465 HIS A 358 REMARK 465 MET B 1 REMARK 465 HIS B 2 REMARK 465 ASN B 3 REMARK 465 PRO B 4 REMARK 465 HIS B 5 REMARK 465 GLU B 6 REMARK 465 SER B 7 REMARK 465 LYS B 8 REMARK 465 THR B 9 REMARK 465 ASP B 10 REMARK 465 LEU B 11 REMARK 465 GLY B 12 REMARK 465 VAL B 341 REMARK 465 PRO B 342 REMARK 465 PRO B 343 REMARK 465 ALA B 344 REMARK 465 PRO B 345 REMARK 465 ALA B 346 REMARK 465 GLY B 347 REMARK 465 ALA B 348 REMARK 465 ALA B 349 REMARK 465 ALA B 350 REMARK 465 LEU B 351 REMARK 465 GLU B 352 REMARK 465 HIS B 353 REMARK 465 HIS B 354 REMARK 465 HIS B 355 REMARK 465 HIS B 356 REMARK 465 HIS B 357 REMARK 465 HIS B 358 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET B 337 CG SD CE REMARK 470 GLU B 338 CG CD OE1 OE2 REMARK 470 GLN B 339 CG CD OE1 NE2 REMARK 470 PRO B 340 CG CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 290 C - N - CA ANGL. DEV. = 9.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 37 -20.96 -173.72 REMARK 500 SER A 40 20.20 -70.20 REMARK 500 GLN A 61 -71.65 -113.09 REMARK 500 LYS A 63 74.29 48.62 REMARK 500 THR A 101 -68.56 -104.19 REMARK 500 GLU A 103 94.85 -65.11 REMARK 500 PRO A 105 5.66 -55.58 REMARK 500 LYS A 122 110.39 -9.52 REMARK 500 LEU A 123 99.20 51.04 REMARK 500 TYR A 212 47.41 39.70 REMARK 500 THR A 219 -10.99 -140.61 REMARK 500 SER A 280 6.17 -69.75 REMARK 500 ARG A 289 145.06 137.25 REMARK 500 PRO A 290 -57.49 -12.71 REMARK 500 GLN A 310 103.36 28.40 REMARK 500 ARG A 331 179.72 69.74 REMARK 500 ALA B 28 -9.10 -57.17 REMARK 500 ARG B 35 12.54 -63.16 REMARK 500 ARG B 36 -52.61 -124.32 REMARK 500 ILE B 44 111.51 -163.49 REMARK 500 LYS B 63 74.03 54.07 REMARK 500 LYS B 102 5.23 54.68 REMARK 500 GLU B 103 158.26 76.42 REMARK 500 GLU B 104 13.33 -167.24 REMARK 500 PRO B 105 56.33 -7.43 REMARK 500 THR B 106 -44.47 -155.44 REMARK 500 LYS B 122 102.72 2.46 REMARK 500 LEU B 123 86.34 49.64 REMARK 500 ALA B 126 -30.45 -29.57 REMARK 500 SER B 284 133.17 -37.26 REMARK 500 ASP B 286 33.02 -88.97 REMARK 500 GLN B 310 112.57 -176.90 REMARK 500 ARG B 331 -178.17 72.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 359 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 359 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C2E B 360 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C2E B 361 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C2E A 360 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C2E A 361 DBREF 3BRE A 1 347 UNP Q9HXT9 Q9HXT9_PSEAE 1 347 DBREF 3BRE B 1 347 UNP Q9HXT9 Q9HXT9_PSEAE 1 347 SEQADV 3BRE ALA A 348 UNP Q9HXT9 EXPRESSION TAG SEQADV 3BRE ALA A 349 UNP Q9HXT9 EXPRESSION TAG SEQADV 3BRE ALA A 350 UNP Q9HXT9 EXPRESSION TAG SEQADV 3BRE LEU A 351 UNP Q9HXT9 EXPRESSION TAG SEQADV 3BRE GLU A 352 UNP Q9HXT9 EXPRESSION TAG SEQADV 3BRE HIS A 353 UNP Q9HXT9 EXPRESSION TAG SEQADV 3BRE HIS A 354 UNP Q9HXT9 EXPRESSION TAG SEQADV 3BRE HIS A 355 UNP Q9HXT9 EXPRESSION TAG SEQADV 3BRE HIS A 356 UNP Q9HXT9 EXPRESSION TAG SEQADV 3BRE HIS A 357 UNP Q9HXT9 EXPRESSION TAG SEQADV 3BRE HIS A 358 UNP Q9HXT9 EXPRESSION TAG SEQADV 3BRE ALA B 348 UNP Q9HXT9 EXPRESSION TAG SEQADV 3BRE ALA B 349 UNP Q9HXT9 EXPRESSION TAG SEQADV 3BRE ALA B 350 UNP Q9HXT9 EXPRESSION TAG SEQADV 3BRE LEU B 351 UNP Q9HXT9 EXPRESSION TAG SEQADV 3BRE GLU B 352 UNP Q9HXT9 EXPRESSION TAG SEQADV 3BRE HIS B 353 UNP Q9HXT9 EXPRESSION TAG SEQADV 3BRE HIS B 354 UNP Q9HXT9 EXPRESSION TAG SEQADV 3BRE HIS B 355 UNP Q9HXT9 EXPRESSION TAG SEQADV 3BRE HIS B 356 UNP Q9HXT9 EXPRESSION TAG SEQADV 3BRE HIS B 357 UNP Q9HXT9 EXPRESSION TAG SEQADV 3BRE HIS B 358 UNP Q9HXT9 EXPRESSION TAG SEQRES 1 A 358 MET HIS ASN PRO HIS GLU SER LYS THR ASP LEU GLY ALA SEQRES 2 A 358 PRO LEU ASP GLY ALA VAL MET VAL LEU LEU VAL ASP ASP SEQRES 3 A 358 GLN ALA MET ILE GLY GLU ALA VAL ARG ARG SER LEU ALA SEQRES 4 A 358 SER GLU ALA GLY ILE ASP PHE HIS PHE CYS SER ASP PRO SEQRES 5 A 358 GLN GLN ALA VAL ALA VAL ALA ASN GLN ILE LYS PRO THR SEQRES 6 A 358 VAL ILE LEU GLN ASP LEU VAL MET PRO GLY VAL ASP GLY SEQRES 7 A 358 LEU THR LEU LEU ALA ALA TYR ARG GLY ASN PRO ALA THR SEQRES 8 A 358 ARG ASP ILE PRO ILE ILE VAL LEU SER THR LYS GLU GLU SEQRES 9 A 358 PRO THR VAL LYS SER ALA ALA PHE ALA ALA GLY ALA ASN SEQRES 10 A 358 ASP TYR LEU VAL LYS LEU PRO ASP ALA ILE GLU LEU VAL SEQRES 11 A 358 ALA ARG ILE ARG TYR HIS SER ARG SER TYR ILE ALA LEU SEQRES 12 A 358 GLN GLN ARG ASP GLU ALA TYR ARG ALA LEU ARG GLU SER SEQRES 13 A 358 GLN GLN GLN LEU LEU GLU THR ASN LEU VAL LEU GLN ARG SEQRES 14 A 358 LEU MET ASN SER ASP GLY LEU THR GLY LEU SER ASN ARG SEQRES 15 A 358 ARG HIS PHE ASP GLU TYR LEU GLU MET GLU TRP ARG ARG SEQRES 16 A 358 SER LEU ARG GLU GLN SER GLN LEU SER LEU LEU MET ILE SEQRES 17 A 358 ASP VAL ASP TYR PHE LYS SER TYR ASN ASP THR PHE GLY SEQRES 18 A 358 HIS VAL ALA GLY ASP GLU ALA LEU ARG GLN VAL ALA GLY SEQRES 19 A 358 ALA ILE ARG GLU GLY CYS SER ARG SER SER ASP LEU ALA SEQRES 20 A 358 ALA ARG TYR GLY GLY GLU GLU PHE ALA MET VAL LEU PRO SEQRES 21 A 358 GLY THR SER PRO GLY GLY ALA ARG LEU LEU ALA GLU LYS SEQRES 22 A 358 VAL ARG ARG THR VAL GLU SER LEU GLN ILE SER HIS ASP SEQRES 23 A 358 GLN PRO ARG PRO GLY SER HIS LEU THR VAL SER ILE GLY SEQRES 24 A 358 VAL SER THR LEU VAL PRO GLY GLY GLY GLY GLN THR PHE SEQRES 25 A 358 ARG VAL LEU ILE GLU MET ALA ASP GLN ALA LEU TYR GLN SEQRES 26 A 358 ALA LYS ASN ASN GLY ARG ASN GLN VAL GLY LEU MET GLU SEQRES 27 A 358 GLN PRO VAL PRO PRO ALA PRO ALA GLY ALA ALA ALA LEU SEQRES 28 A 358 GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 358 MET HIS ASN PRO HIS GLU SER LYS THR ASP LEU GLY ALA SEQRES 2 B 358 PRO LEU ASP GLY ALA VAL MET VAL LEU LEU VAL ASP ASP SEQRES 3 B 358 GLN ALA MET ILE GLY GLU ALA VAL ARG ARG SER LEU ALA SEQRES 4 B 358 SER GLU ALA GLY ILE ASP PHE HIS PHE CYS SER ASP PRO SEQRES 5 B 358 GLN GLN ALA VAL ALA VAL ALA ASN GLN ILE LYS PRO THR SEQRES 6 B 358 VAL ILE LEU GLN ASP LEU VAL MET PRO GLY VAL ASP GLY SEQRES 7 B 358 LEU THR LEU LEU ALA ALA TYR ARG GLY ASN PRO ALA THR SEQRES 8 B 358 ARG ASP ILE PRO ILE ILE VAL LEU SER THR LYS GLU GLU SEQRES 9 B 358 PRO THR VAL LYS SER ALA ALA PHE ALA ALA GLY ALA ASN SEQRES 10 B 358 ASP TYR LEU VAL LYS LEU PRO ASP ALA ILE GLU LEU VAL SEQRES 11 B 358 ALA ARG ILE ARG TYR HIS SER ARG SER TYR ILE ALA LEU SEQRES 12 B 358 GLN GLN ARG ASP GLU ALA TYR ARG ALA LEU ARG GLU SER SEQRES 13 B 358 GLN GLN GLN LEU LEU GLU THR ASN LEU VAL LEU GLN ARG SEQRES 14 B 358 LEU MET ASN SER ASP GLY LEU THR GLY LEU SER ASN ARG SEQRES 15 B 358 ARG HIS PHE ASP GLU TYR LEU GLU MET GLU TRP ARG ARG SEQRES 16 B 358 SER LEU ARG GLU GLN SER GLN LEU SER LEU LEU MET ILE SEQRES 17 B 358 ASP VAL ASP TYR PHE LYS SER TYR ASN ASP THR PHE GLY SEQRES 18 B 358 HIS VAL ALA GLY ASP GLU ALA LEU ARG GLN VAL ALA GLY SEQRES 19 B 358 ALA ILE ARG GLU GLY CYS SER ARG SER SER ASP LEU ALA SEQRES 20 B 358 ALA ARG TYR GLY GLY GLU GLU PHE ALA MET VAL LEU PRO SEQRES 21 B 358 GLY THR SER PRO GLY GLY ALA ARG LEU LEU ALA GLU LYS SEQRES 22 B 358 VAL ARG ARG THR VAL GLU SER LEU GLN ILE SER HIS ASP SEQRES 23 B 358 GLN PRO ARG PRO GLY SER HIS LEU THR VAL SER ILE GLY SEQRES 24 B 358 VAL SER THR LEU VAL PRO GLY GLY GLY GLY GLN THR PHE SEQRES 25 B 358 ARG VAL LEU ILE GLU MET ALA ASP GLN ALA LEU TYR GLN SEQRES 26 B 358 ALA LYS ASN ASN GLY ARG ASN GLN VAL GLY LEU MET GLU SEQRES 27 B 358 GLN PRO VAL PRO PRO ALA PRO ALA GLY ALA ALA ALA LEU SEQRES 28 B 358 GLU HIS HIS HIS HIS HIS HIS HET MG A 359 1 HET C2E A 360 46 HET C2E A 361 46 HET MG B 359 1 HET C2E B 360 46 HET C2E B 361 46 HETNAM MG MAGNESIUM ION HETNAM C2E 9,9'-[(2R,3R,3AS,5S,7AR,9R,10R,10AS,12S,14AR)-3,5,10, HETNAM 2 C2E 12-TETRAHYDROXY-5,12-DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3, HETNAM 3 C2E 2-D:3',2'-J][1,3,7,9,2, HETNAM 4 C2E 8]TETRAOXADIPHOSPHACYCLODODECINE-2,9-DIYL]BIS(2-AMINO- HETNAM 5 C2E 1,9-DIHYDRO-6H-PURIN-6-ONE) HETSYN C2E C-DI-GMP; CYCLIC DIGUANOSINE MONOPHOSPHATE FORMUL 3 MG 2(MG 2+) FORMUL 4 C2E 4(C20 H24 N10 O14 P2) HELIX 1 1 MET A 29 ARG A 36 1 8 HELIX 2 2 ASP A 51 LYS A 63 1 13 HELIX 3 3 ASP A 77 ARG A 86 1 10 HELIX 4 4 GLU A 104 ALA A 114 1 11 HELIX 5 5 ASP A 125 SER A 173 1 49 HELIX 6 6 ASN A 181 GLN A 200 1 20 HELIX 7 7 TYR A 212 GLY A 221 1 10 HELIX 8 8 GLY A 221 GLU A 238 1 18 HELIX 9 9 SER A 263 SER A 280 1 18 HELIX 10 10 PHE A 312 ASN A 328 1 17 HELIX 11 11 GLN B 27 LEU B 38 1 12 HELIX 12 12 ASP B 51 LYS B 63 1 13 HELIX 13 13 ASP B 77 ASN B 88 1 12 HELIX 14 14 THR B 106 GLY B 115 1 10 HELIX 15 15 ASP B 125 SER B 173 1 49 HELIX 16 16 ASN B 181 GLN B 200 1 20 HELIX 17 17 TYR B 212 GLY B 239 1 28 HELIX 18 18 SER B 263 SER B 280 1 18 HELIX 19 19 THR B 311 ASN B 328 1 18 SHEET 1 A 5 ILE A 44 CYS A 49 0 SHEET 2 A 5 VAL A 19 VAL A 24 1 N VAL A 21 O ASP A 45 SHEET 3 A 5 VAL A 66 ASP A 70 1 O LEU A 68 N VAL A 24 SHEET 4 A 5 ILE A 96 SER A 100 1 O ILE A 97 N ILE A 67 SHEET 5 A 5 ASP A 118 VAL A 121 1 O LEU A 120 N VAL A 98 SHEET 1 B 5 LEU A 246 GLY A 251 0 SHEET 2 B 5 GLU A 254 PRO A 260 -1 O ALA A 256 N ALA A 248 SHEET 3 B 5 LEU A 203 VAL A 210 -1 N ILE A 208 O PHE A 255 SHEET 4 B 5 VAL A 296 LEU A 303 -1 O LEU A 303 N LEU A 203 SHEET 5 B 5 VAL A 334 MET A 337 1 O GLY A 335 N ILE A 298 SHEET 1 C 2 SER A 284 HIS A 285 0 SHEET 2 C 2 SER A 292 HIS A 293 -1 O SER A 292 N HIS A 285 SHEET 1 D 5 ILE B 44 CYS B 49 0 SHEET 2 D 5 VAL B 19 VAL B 24 1 N VAL B 19 O ASP B 45 SHEET 3 D 5 VAL B 66 ASP B 70 1 O LEU B 68 N VAL B 24 SHEET 4 D 5 ILE B 96 SER B 100 1 O LEU B 99 N GLN B 69 SHEET 5 D 5 ASP B 118 VAL B 121 1 O LEU B 120 N SER B 100 SHEET 1 E 5 LEU B 246 ARG B 249 0 SHEET 2 E 5 GLU B 254 PRO B 260 -1 O ALA B 256 N ALA B 248 SHEET 3 E 5 LEU B 203 VAL B 210 -1 N ILE B 208 O PHE B 255 SHEET 4 E 5 VAL B 296 LEU B 303 -1 O SER B 301 N LEU B 205 SHEET 5 E 5 VAL B 334 LEU B 336 1 O GLY B 335 N ILE B 298 SHEET 1 F 2 SER B 284 HIS B 285 0 SHEET 2 F 2 SER B 292 HIS B 293 -1 O SER B 292 N HIS B 285 LINK OD2 ASP A 70 MG MG A 359 1555 1555 2.46 CISPEP 1 GLN B 287 PRO B 288 0 0.03 SITE 1 AC1 3 ASP B 26 GLN B 27 ASP B 70 SITE 1 AC2 4 ASP A 25 ASP A 26 ASP A 70 LYS A 122 SITE 1 AC3 8 ARG A 198 SER B 241 ARG B 242 ASP B 245 SITE 2 AC3 8 THR B 262 GLY B 266 LEU B 269 LEU B 270 SITE 1 AC4 4 ARG A 198 SER B 241 ARG B 242 SER B 243 SITE 1 AC5 10 SER A 241 ARG A 242 ASP A 245 LEU A 259 SITE 2 AC5 10 THR A 262 GLY A 266 LEU A 269 ARG B 198 SITE 3 AC5 10 ASN B 329 GLN B 333 SITE 1 AC6 7 SER A 241 ARG A 242 SER A 243 ARG B 198 SITE 2 AC6 7 ARG B 268 GLU B 272 ARG B 275 CRYST1 144.510 72.748 106.095 90.00 110.79 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006920 0.000000 0.002628 0.00000 SCALE2 0.000000 0.013746 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010082 0.00000