data_3BT1 # _entry.id 3BT1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3BT1 pdb_00003bt1 10.2210/pdb3bt1/pdb RCSB RCSB045932 ? ? WWPDB D_1000045932 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2fd6 'Structure of urokinase receptor in complex with urokinase' unspecified PDB 3BT2 'The same protein complex with Fab fragments' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3BT1 _pdbx_database_status.recvd_initial_deposition_date 2007-12-27 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Huang, M.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structures of two human vitronectin, urokinase and urokinase receptor complexes' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 15 _citation.page_first 422 _citation.page_last 423 _citation.year 2008 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18376415 _citation.pdbx_database_id_DOI 10.1038/nsmb.1404 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Huai, Q.' 1 ? primary 'Zhou, A.' 2 ? primary 'Lin, L.' 3 ? primary 'Mazar, A.P.' 4 ? primary 'Parry, G.C.' 5 ? primary 'Callahan, J.' 6 ? primary 'Shaw, D.E.' 7 ? primary 'Furie, B.' 8 ? primary 'Furie, B.C.' 9 ? primary 'Huang, M.' 10 ? # _cell.entry_id 3BT1 _cell.length_a 97.353 _cell.length_b 105.187 _cell.length_c 55.360 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3BT1 _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Urokinase-type plasminogen activator' 15359.318 1 ? ? 'urokinase amino terminal fragment, Urokinase-type plasminogen activator long chain A, UNP residues 21-153' ? 2 polymer man Vitronectin 4573.103 1 ? ? 'sometomedin-B domain' ? 3 polymer man 'Urokinase plasminogen activator surface receptor' 31601.479 1 ? ? ? ? 4 branched man 'alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 586.542 1 ? ? ? ? 5 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 2 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'uPA, U-plasminogen activator' 2 'Serum-spreading factor, S-protein, V75' 3 'uPAR, U-PAR, Monocyte activation antigen Mo3, CD87 antigen' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;RSSNELHQVPSNCDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYEGNGHFYRGKASTDTMGRPCLPWNSAT VLQQTYHAHRSDALQLGLGKHNYCRNPDNRRRPWCYVQVGLKPLVQECMVHDCAD ; ;RSSNELHQVPSNCDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYEGNGHFYRGKASTDTMGRPCLPWNSAT VLQQTYHAHRSDALQLGLGKHNYCRNPDNRRRPWCYVQVGLKPLVQECMVHDCAD ; A ? 2 'polypeptide(L)' no no QESCKGRCTEGFNVDKKCQCDELCSYYQSCCTDYTAECKP QESCKGRCTEGFNVDKKCQCDELCSYYQSCCTDYTAECKP B ? 3 'polypeptide(L)' no no ;RSLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQ GNSGRAVTYSRSRYLECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNG FHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMV RGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDLDVQYR ; ;RSLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQ GNSGRAVTYSRSRYLECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNG FHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMV RGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDLDVQYR ; U ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 SER n 1 3 SER n 1 4 ASN n 1 5 GLU n 1 6 LEU n 1 7 HIS n 1 8 GLN n 1 9 VAL n 1 10 PRO n 1 11 SER n 1 12 ASN n 1 13 CYS n 1 14 ASP n 1 15 CYS n 1 16 LEU n 1 17 ASN n 1 18 GLY n 1 19 GLY n 1 20 THR n 1 21 CYS n 1 22 VAL n 1 23 SER n 1 24 ASN n 1 25 LYS n 1 26 TYR n 1 27 PHE n 1 28 SER n 1 29 ASN n 1 30 ILE n 1 31 HIS n 1 32 TRP n 1 33 CYS n 1 34 ASN n 1 35 CYS n 1 36 PRO n 1 37 LYS n 1 38 LYS n 1 39 PHE n 1 40 GLY n 1 41 GLY n 1 42 GLN n 1 43 HIS n 1 44 CYS n 1 45 GLU n 1 46 ILE n 1 47 ASP n 1 48 LYS n 1 49 SER n 1 50 LYS n 1 51 THR n 1 52 CYS n 1 53 TYR n 1 54 GLU n 1 55 GLY n 1 56 ASN n 1 57 GLY n 1 58 HIS n 1 59 PHE n 1 60 TYR n 1 61 ARG n 1 62 GLY n 1 63 LYS n 1 64 ALA n 1 65 SER n 1 66 THR n 1 67 ASP n 1 68 THR n 1 69 MET n 1 70 GLY n 1 71 ARG n 1 72 PRO n 1 73 CYS n 1 74 LEU n 1 75 PRO n 1 76 TRP n 1 77 ASN n 1 78 SER n 1 79 ALA n 1 80 THR n 1 81 VAL n 1 82 LEU n 1 83 GLN n 1 84 GLN n 1 85 THR n 1 86 TYR n 1 87 HIS n 1 88 ALA n 1 89 HIS n 1 90 ARG n 1 91 SER n 1 92 ASP n 1 93 ALA n 1 94 LEU n 1 95 GLN n 1 96 LEU n 1 97 GLY n 1 98 LEU n 1 99 GLY n 1 100 LYS n 1 101 HIS n 1 102 ASN n 1 103 TYR n 1 104 CYS n 1 105 ARG n 1 106 ASN n 1 107 PRO n 1 108 ASP n 1 109 ASN n 1 110 ARG n 1 111 ARG n 1 112 ARG n 1 113 PRO n 1 114 TRP n 1 115 CYS n 1 116 TYR n 1 117 VAL n 1 118 GLN n 1 119 VAL n 1 120 GLY n 1 121 LEU n 1 122 LYS n 1 123 PRO n 1 124 LEU n 1 125 VAL n 1 126 GLN n 1 127 GLU n 1 128 CYS n 1 129 MET n 1 130 VAL n 1 131 HIS n 1 132 ASP n 1 133 CYS n 1 134 ALA n 1 135 ASP n 2 1 GLN n 2 2 GLU n 2 3 SER n 2 4 CYS n 2 5 LYS n 2 6 GLY n 2 7 ARG n 2 8 CYS n 2 9 THR n 2 10 GLU n 2 11 GLY n 2 12 PHE n 2 13 ASN n 2 14 VAL n 2 15 ASP n 2 16 LYS n 2 17 LYS n 2 18 CYS n 2 19 GLN n 2 20 CYS n 2 21 ASP n 2 22 GLU n 2 23 LEU n 2 24 CYS n 2 25 SER n 2 26 TYR n 2 27 TYR n 2 28 GLN n 2 29 SER n 2 30 CYS n 2 31 CYS n 2 32 THR n 2 33 ASP n 2 34 TYR n 2 35 THR n 2 36 ALA n 2 37 GLU n 2 38 CYS n 2 39 LYS n 2 40 PRO n 3 1 ARG n 3 2 SER n 3 3 LEU n 3 4 ARG n 3 5 CYS n 3 6 MET n 3 7 GLN n 3 8 CYS n 3 9 LYS n 3 10 THR n 3 11 ASN n 3 12 GLY n 3 13 ASP n 3 14 CYS n 3 15 ARG n 3 16 VAL n 3 17 GLU n 3 18 GLU n 3 19 CYS n 3 20 ALA n 3 21 LEU n 3 22 GLY n 3 23 GLN n 3 24 ASP n 3 25 LEU n 3 26 CYS n 3 27 ARG n 3 28 THR n 3 29 THR n 3 30 ILE n 3 31 VAL n 3 32 ARG n 3 33 LEU n 3 34 TRP n 3 35 GLU n 3 36 GLU n 3 37 GLY n 3 38 GLU n 3 39 GLU n 3 40 LEU n 3 41 GLU n 3 42 LEU n 3 43 VAL n 3 44 GLU n 3 45 LYS n 3 46 SER n 3 47 CYS n 3 48 THR n 3 49 HIS n 3 50 SER n 3 51 GLU n 3 52 LYS n 3 53 THR n 3 54 ASN n 3 55 ARG n 3 56 THR n 3 57 LEU n 3 58 SER n 3 59 TYR n 3 60 ARG n 3 61 THR n 3 62 GLY n 3 63 LEU n 3 64 LYS n 3 65 ILE n 3 66 THR n 3 67 SER n 3 68 LEU n 3 69 THR n 3 70 GLU n 3 71 VAL n 3 72 VAL n 3 73 CYS n 3 74 GLY n 3 75 LEU n 3 76 ASP n 3 77 LEU n 3 78 CYS n 3 79 ASN n 3 80 GLN n 3 81 GLY n 3 82 ASN n 3 83 SER n 3 84 GLY n 3 85 ARG n 3 86 ALA n 3 87 VAL n 3 88 THR n 3 89 TYR n 3 90 SER n 3 91 ARG n 3 92 SER n 3 93 ARG n 3 94 TYR n 3 95 LEU n 3 96 GLU n 3 97 CYS n 3 98 ILE n 3 99 SER n 3 100 CYS n 3 101 GLY n 3 102 SER n 3 103 SER n 3 104 ASP n 3 105 MET n 3 106 SER n 3 107 CYS n 3 108 GLU n 3 109 ARG n 3 110 GLY n 3 111 ARG n 3 112 HIS n 3 113 GLN n 3 114 SER n 3 115 LEU n 3 116 GLN n 3 117 CYS n 3 118 ARG n 3 119 SER n 3 120 PRO n 3 121 GLU n 3 122 GLU n 3 123 GLN n 3 124 CYS n 3 125 LEU n 3 126 ASP n 3 127 VAL n 3 128 VAL n 3 129 THR n 3 130 HIS n 3 131 TRP n 3 132 ILE n 3 133 GLN n 3 134 GLU n 3 135 GLY n 3 136 GLU n 3 137 GLU n 3 138 GLY n 3 139 ARG n 3 140 PRO n 3 141 LYS n 3 142 ASP n 3 143 ASP n 3 144 ARG n 3 145 HIS n 3 146 LEU n 3 147 ARG n 3 148 GLY n 3 149 CYS n 3 150 GLY n 3 151 TYR n 3 152 LEU n 3 153 PRO n 3 154 GLY n 3 155 CYS n 3 156 PRO n 3 157 GLY n 3 158 SER n 3 159 ASN n 3 160 GLY n 3 161 PHE n 3 162 HIS n 3 163 ASN n 3 164 ASN n 3 165 ASP n 3 166 THR n 3 167 PHE n 3 168 HIS n 3 169 PHE n 3 170 LEU n 3 171 LYS n 3 172 CYS n 3 173 CYS n 3 174 ASN n 3 175 THR n 3 176 THR n 3 177 LYS n 3 178 CYS n 3 179 ASN n 3 180 GLU n 3 181 GLY n 3 182 PRO n 3 183 ILE n 3 184 LEU n 3 185 GLU n 3 186 LEU n 3 187 GLU n 3 188 ASN n 3 189 LEU n 3 190 PRO n 3 191 GLN n 3 192 ASN n 3 193 GLY n 3 194 ARG n 3 195 GLN n 3 196 CYS n 3 197 TYR n 3 198 SER n 3 199 CYS n 3 200 LYS n 3 201 GLY n 3 202 ASN n 3 203 SER n 3 204 THR n 3 205 HIS n 3 206 GLY n 3 207 CYS n 3 208 SER n 3 209 SER n 3 210 GLU n 3 211 GLU n 3 212 THR n 3 213 PHE n 3 214 LEU n 3 215 ILE n 3 216 ASP n 3 217 CYS n 3 218 ARG n 3 219 GLY n 3 220 PRO n 3 221 MET n 3 222 ASN n 3 223 GLN n 3 224 CYS n 3 225 LEU n 3 226 VAL n 3 227 ALA n 3 228 THR n 3 229 GLY n 3 230 THR n 3 231 HIS n 3 232 GLU n 3 233 PRO n 3 234 LYS n 3 235 ASN n 3 236 GLN n 3 237 SER n 3 238 TYR n 3 239 MET n 3 240 VAL n 3 241 ARG n 3 242 GLY n 3 243 CYS n 3 244 ALA n 3 245 THR n 3 246 ALA n 3 247 SER n 3 248 MET n 3 249 CYS n 3 250 GLN n 3 251 HIS n 3 252 ALA n 3 253 HIS n 3 254 LEU n 3 255 GLY n 3 256 ASP n 3 257 ALA n 3 258 PHE n 3 259 SER n 3 260 MET n 3 261 ASN n 3 262 HIS n 3 263 ILE n 3 264 ASP n 3 265 VAL n 3 266 SER n 3 267 CYS n 3 268 CYS n 3 269 THR n 3 270 LYS n 3 271 SER n 3 272 GLY n 3 273 CYS n 3 274 ASN n 3 275 HIS n 3 276 PRO n 3 277 ASP n 3 278 LEU n 3 279 ASP n 3 280 VAL n 3 281 GLN n 3 282 TYR n 3 283 ARG n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human Homo PLAU ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? 'fruit fly' 'Drosophila melanogaster' 7227 Drosophila ? ? ? ? ? 'S2 CELLS' ? ? ? ? ? ? ? PLASMID ? ? ? PMT/BIP ? ? 2 1 sample ? ? ? human Homo VTN ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21' 511693 Escherichia ? ? 'Escherichia coli' ? ? BL21 ? ? ? ? ? ? ? PLASMID ? ? ? ? ? ? 3 1 sample ? ? ? human Homo 'PLAUR, MO3, UPAR' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? 'fruit fly' 'Drosophila melanogaster' 7227 Drosophila ? ? ? ? ? 'S2 CELLS' ? ? ? ? ? ? ? PLASMID ? ? ? PMT/BIP ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP UROK_HUMAN P00749 1 ;SNELHQVPSNCDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYEGNGHFYRGKASTDTMGRPCLPWNSATVL QQTYHAHRSDALQLGLGKHNYCRNPDNRRRPWCYVQVGLKPLVQECMVHDCAD ; 21 ? 2 UNP VTNC_HUMAN P04004 2 QESCKGRCTEGFNVDKKCQCDELCSYYQSCCTDYTAECKP 21 ? 3 UNP UPAR_HUMAN Q03405 3 ;LRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGN SGRAVTYSRSRYLECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNGFH NNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRG CATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDLDVQYR ; 23 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3BT1 A 3 ? 135 ? P00749 21 ? 153 ? 1 133 2 2 3BT1 B 1 ? 40 ? P04004 21 ? 60 ? 2 41 3 3 3BT1 U 3 ? 283 ? Q03405 23 ? 303 ? 1 281 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3BT1 ARG A 1 ? UNP P00749 ? ? 'expression tag' -1 1 1 3BT1 SER A 2 ? UNP P00749 ? ? 'expression tag' 0 2 3 3BT1 ARG U 1 ? UNP Q03405 ? ? 'expression tag' -1 3 3 3BT1 SER U 2 ? UNP Q03405 ? ? 'expression tag' 0 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3BT1 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.75 _exptl_crystal.density_percent_sol 55.27 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method MICRODIALYSIS _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '12% PEG 3350, 50mM HEPES pH 7.5, MICRODIALYSIS, temperature 295K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 23-ID-B' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 23-ID-B _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 3BT1 _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 100.000 _reflns.d_resolution_high 2.800 _reflns.number_obs 14540 _reflns.number_all ? _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.08100 _reflns.pdbx_Rsym_value 0.08100 _reflns.pdbx_netI_over_sigmaI 33.1000 _reflns.B_iso_Wilson_estimate 82.00 _reflns.pdbx_redundancy 5.900 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.80 _reflns_shell.d_res_low 2.90 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.80300 _reflns_shell.pdbx_Rsym_value 0.80300 _reflns_shell.meanI_over_sigI_obs 2.600 _reflns_shell.pdbx_redundancy 5.90 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3BT1 _refine.ls_number_reflns_obs 13778 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.68 _refine.ls_d_res_high 2.80 _refine.ls_percent_reflns_obs 99.6 _refine.ls_R_factor_obs 0.244 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.241 _refine.ls_R_factor_R_free 0.308 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 726 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.930 _refine.correlation_coeff_Fo_to_Fc_free 0.889 _refine.B_iso_mean 54.32 _refine.aniso_B[1][1] 0.48 _refine.aniso_B[2][2] -3.25 _refine.aniso_B[3][3] 2.77 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.05 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 2FD6' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.439 _refine.overall_SU_ML 0.374 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 43.465 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3394 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 67 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 3461 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 27.68 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.016 0.021 ? 3560 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 2473 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.821 1.962 ? 4821 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.048 3.016 ? 5921 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 9.464 5.000 ? 434 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.371 24.302 ? 172 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 21.248 15.000 ? 595 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.560 15.000 ? 25 'X-RAY DIFFRACTION' ? r_chiral_restr 0.102 0.200 ? 510 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 3950 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 686 'X-RAY DIFFRACTION' ? r_nbd_refined 0.266 0.200 ? 1061 'X-RAY DIFFRACTION' ? r_nbd_other 0.221 0.200 ? 2877 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.191 0.200 ? 1752 'X-RAY DIFFRACTION' ? r_nbtor_other 0.100 0.200 ? 2006 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.196 0.200 ? 114 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other 0.163 0.200 ? 2 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.185 0.200 ? 17 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.246 0.200 ? 38 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.064 0.200 ? 2 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.746 1.500 ? 2697 'X-RAY DIFFRACTION' ? r_mcbond_other 0.105 1.500 ? 909 'X-RAY DIFFRACTION' ? r_mcangle_it 0.958 2.000 ? 3478 'X-RAY DIFFRACTION' ? r_scbond_it 1.356 3.000 ? 1573 'X-RAY DIFFRACTION' ? r_scangle_it 2.154 4.500 ? 1343 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.80 _refine_ls_shell.d_res_low 2.87 _refine_ls_shell.number_reflns_R_work 1005 _refine_ls_shell.R_factor_R_work 0.399 _refine_ls_shell.percent_reflns_obs 100.0 _refine_ls_shell.R_factor_R_free 0.598 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 54 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3BT1 _struct.title 'Structure of urokinase receptor, urokinase and vitronectin complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3BT1 _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text ;protein-protein complex, Glycoprotein, GPI-anchor, Lipoprotein, Membrane, Receptor, Secreted, Blood coagulation, EGF-like domain, Fibrinolysis, Hydrolase, Kringle, Phosphoprotein, Plasminogen activation, Protease, Serine protease, Zymogen, Cell adhesion, Heparin-binding, Sulfation, Immunoglobulin domain, IMMUNE SYSTEM ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 80 ? GLN A 84 ? THR A 78 GLN A 82 5 ? 5 HELX_P HELX_P2 2 ARG A 90 ? GLN A 95 ? ARG A 88 GLN A 93 5 ? 6 HELX_P HELX_P3 3 LEU B 23 ? GLN B 28 ? LEU B 24 GLN B 29 1 ? 6 HELX_P HELX_P4 4 ASP B 33 ? CYS B 38 ? ASP B 34 CYS B 39 1 ? 6 HELX_P HELX_P5 5 SER C 103 ? MET C 105 ? SER U 101 MET U 103 5 ? 3 HELX_P HELX_P6 6 SER C 208 ? THR C 212 ? SER U 206 THR U 210 5 ? 5 HELX_P HELX_P7 7 HIS C 253 ? PHE C 258 ? HIS U 251 PHE U 256 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 13 SG ? ? ? 1_555 A CYS 21 SG ? ? A CYS 11 A CYS 19 1_555 ? ? ? ? ? ? ? 2.008 ? ? disulf2 disulf ? ? A CYS 15 SG ? ? ? 1_555 A CYS 33 SG ? ? A CYS 13 A CYS 31 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf3 disulf ? ? A CYS 35 SG ? ? ? 1_555 A CYS 44 SG ? ? A CYS 33 A CYS 42 1_555 ? ? ? ? ? ? ? 2.023 ? ? disulf4 disulf ? ? A CYS 52 SG ? ? ? 1_555 A CYS 133 SG ? ? A CYS 50 A CYS 131 1_555 ? ? ? ? ? ? ? 2.039 ? ? disulf5 disulf ? ? A CYS 73 SG ? ? ? 1_555 A CYS 115 SG ? ? A CYS 71 A CYS 113 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf6 disulf ? ? A CYS 104 SG ? ? ? 1_555 A CYS 128 SG ? ? A CYS 102 A CYS 126 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf7 disulf ? ? B CYS 4 SG ? ? ? 1_555 B CYS 20 SG ? ? B CYS 5 B CYS 21 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf8 disulf ? ? B CYS 8 SG ? ? ? 1_555 B CYS 38 SG ? ? B CYS 9 B CYS 39 1_555 ? ? ? ? ? ? ? 2.007 ? ? disulf9 disulf ? ? B CYS 18 SG ? ? ? 1_555 B CYS 31 SG ? ? B CYS 19 B CYS 32 1_555 ? ? ? ? ? ? ? 2.080 ? ? disulf10 disulf ? ? B CYS 24 SG ? ? ? 1_555 B CYS 30 SG ? ? B CYS 25 B CYS 31 1_555 ? ? ? ? ? ? ? 2.010 ? ? disulf11 disulf ? ? C CYS 5 SG ? ? ? 1_555 C CYS 26 SG ? ? U CYS 3 U CYS 24 1_555 ? ? ? ? ? ? ? 2.055 ? ? disulf12 disulf ? ? C CYS 8 SG ? ? ? 1_555 C CYS 14 SG ? ? U CYS 6 U CYS 12 1_555 ? ? ? ? ? ? ? 2.019 ? ? disulf13 disulf ? ? C CYS 19 SG ? ? ? 1_555 C CYS 47 SG ? ? U CYS 17 U CYS 45 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf14 disulf ? ? C CYS 73 SG ? ? ? 1_555 C CYS 78 SG ? ? U CYS 71 U CYS 76 1_555 ? ? ? ? ? ? ? 2.046 ? ? disulf15 disulf ? ? C CYS 97 SG ? ? ? 1_555 C CYS 124 SG ? ? U CYS 95 U CYS 122 1_555 ? ? ? ? ? ? ? 1.983 ? ? disulf16 disulf ? ? C CYS 100 SG ? ? ? 1_555 C CYS 107 SG ? ? U CYS 98 U CYS 105 1_555 ? ? ? ? ? ? ? 2.041 ? ? disulf17 disulf ? ? C CYS 117 SG ? ? ? 1_555 C CYS 149 SG ? ? U CYS 115 U CYS 147 1_555 ? ? ? ? ? ? ? 2.078 ? ? disulf18 disulf ? ? C CYS 155 SG ? ? ? 1_555 C CYS 172 SG ? ? U CYS 153 U CYS 170 1_555 ? ? ? ? ? ? ? 2.001 ? ? disulf19 disulf ? ? C CYS 173 SG ? ? ? 1_555 C CYS 178 SG ? ? U CYS 171 U CYS 176 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf20 disulf ? ? C CYS 196 SG ? ? ? 1_555 C CYS 224 SG ? ? U CYS 194 U CYS 222 1_555 ? ? ? ? ? ? ? 1.966 ? ? disulf21 disulf ? ? C CYS 199 SG ? ? ? 1_555 C CYS 207 SG ? ? U CYS 197 U CYS 205 1_555 ? ? ? ? ? ? ? 2.079 ? ? disulf22 disulf ? ? C CYS 217 SG ? ? ? 1_555 C CYS 243 SG ? ? U CYS 215 U CYS 241 1_555 ? ? ? ? ? ? ? 2.011 ? ? disulf23 disulf ? ? C CYS 249 SG ? ? ? 1_555 C CYS 267 SG ? ? U CYS 247 U CYS 265 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf24 disulf ? ? C CYS 268 SG ? ? ? 1_555 C CYS 273 SG ? ? U CYS 266 U CYS 271 1_555 ? ? ? ? ? ? ? 2.038 ? ? covale1 covale one ? C ASN 54 ND2 ? ? ? 1_555 E NAG . C1 ? ? U ASN 52 U NAG 1052 1_555 ? ? ? ? ? ? ? 1.552 ? N-Glycosylation covale2 covale one ? C ASN 174 ND2 ? ? ? 1_555 F NAG . C1 ? ? U ASN 172 U NAG 1172 1_555 ? ? ? ? ? ? ? 1.334 ? N-Glycosylation covale3 covale one ? C ASN 202 ND2 ? ? ? 1_555 D NAG . C1 ? ? U ASN 200 C NAG 1 1_555 ? ? ? ? ? ? ? 1.470 ? N-Glycosylation covale4 covale both ? D NAG . O4 ? ? ? 1_555 D NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.469 ? ? covale5 covale both ? D NAG . O4 ? ? ? 1_555 D MAN . C1 ? ? C NAG 2 C MAN 3 1_555 ? ? ? ? ? ? ? 1.482 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 2 ? D ? 2 ? E ? 2 ? F ? 4 ? G ? 9 ? H ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? parallel D 1 2 ? anti-parallel E 1 2 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel G 4 5 ? anti-parallel G 5 6 ? anti-parallel G 6 7 ? anti-parallel G 7 8 ? anti-parallel G 8 9 ? anti-parallel H 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 20 ? SER A 23 ? THR A 18 SER A 21 A 2 HIS A 31 ? ASN A 34 ? HIS A 29 ASN A 32 B 1 PHE A 39 ? GLY A 40 ? PHE A 37 GLY A 38 B 2 ILE A 46 ? ASP A 47 ? ILE A 44 ASP A 45 C 1 CYS A 52 ? TYR A 53 ? CYS A 50 TYR A 51 C 2 HIS A 131 ? ASP A 132 ? HIS A 129 ASP A 130 D 1 TRP A 114 ? VAL A 117 ? TRP A 112 VAL A 115 D 2 LEU A 124 ? GLU A 127 ? LEU A 122 GLU A 125 E 1 ARG C 4 ? CYS C 8 ? ARG U 2 CYS U 6 E 2 CYS C 14 ? GLU C 18 ? CYS U 12 GLU U 16 F 1 GLU C 38 ? THR C 48 ? GLU U 36 THR U 46 F 2 LEU C 25 ? GLU C 35 ? LEU U 23 GLU U 33 F 3 LYS C 64 ? CYS C 73 ? LYS U 62 CYS U 71 F 4 SER C 58 ? THR C 61 ? SER U 56 THR U 59 G 1 GLN C 113 ? GLN C 116 ? GLN U 111 GLN U 114 G 2 GLU C 96 ? GLY C 101 ? GLU U 94 GLY U 99 G 3 HIS C 145 ? GLY C 150 ? HIS U 143 GLY U 148 G 4 GLN C 123 ? TRP C 131 ? GLN U 121 TRP U 129 G 5 THR C 166 ? CYS C 173 ? THR U 164 CYS U 171 G 6 GLY C 157 ? ASN C 163 ? GLY U 155 ASN U 161 G 7 MET C 239 ? ALA C 244 ? MET U 237 ALA U 242 G 8 GLN C 223 ? HIS C 231 ? GLN U 221 HIS U 229 G 9 MET C 260 ? CYS C 268 ? MET U 258 CYS U 266 H 1 GLN C 191 ? SER C 198 ? GLN U 189 SER U 196 H 2 PHE C 213 ? ARG C 218 ? PHE U 211 ARG U 216 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 22 ? N VAL A 20 O TRP A 32 ? O TRP A 30 B 1 2 N GLY A 40 ? N GLY A 38 O ILE A 46 ? O ILE A 44 C 1 2 N TYR A 53 ? N TYR A 51 O HIS A 131 ? O HIS A 129 D 1 2 N CYS A 115 ? N CYS A 113 O GLN A 126 ? O GLN A 124 E 1 2 N CYS C 5 ? N CYS U 3 O GLU C 17 ? O GLU U 15 F 1 2 O GLU C 38 ? O GLU U 36 N GLU C 35 ? N GLU U 33 F 2 3 N ILE C 30 ? N ILE U 28 O THR C 69 ? O THR U 67 F 3 4 O THR C 66 ? O THR U 64 N TYR C 59 ? N TYR U 57 G 1 2 O LEU C 115 ? O LEU U 113 N CYS C 97 ? N CYS U 95 G 2 3 N CYS C 100 ? N CYS U 98 O ARG C 147 ? O ARG U 145 G 3 4 O GLY C 150 ? O GLY U 148 N GLN C 123 ? N GLN U 121 G 4 5 N HIS C 130 ? N HIS U 128 O PHE C 167 ? O PHE U 165 G 5 6 O LEU C 170 ? O LEU U 168 N ASN C 159 ? N ASN U 157 G 6 7 N HIS C 162 ? N HIS U 160 O CYS C 243 ? O CYS U 241 G 7 8 O ALA C 244 ? O ALA U 242 N GLN C 223 ? N GLN U 221 G 8 9 N CYS C 224 ? N CYS U 222 O CYS C 268 ? O CYS U 266 H 1 2 N CYS C 196 ? N CYS U 194 O ILE C 215 ? O ILE U 213 # _database_PDB_matrix.entry_id 3BT1 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3BT1 _atom_sites.fract_transf_matrix[1][1] 0.010272 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009507 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018064 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 'NAG C 1 HAS WRONG CHIRALITY AT ATOM C1' 2 'NAG U 1172 HAS WRONG CHIRALITY AT ATOM C1' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 -1 ? ? ? A . n A 1 2 SER 2 0 ? ? ? A . n A 1 3 SER 3 1 ? ? ? A . n A 1 4 ASN 4 2 ? ? ? A . n A 1 5 GLU 5 3 ? ? ? A . n A 1 6 LEU 6 4 ? ? ? A . n A 1 7 HIS 7 5 ? ? ? A . n A 1 8 GLN 8 6 ? ? ? A . n A 1 9 VAL 9 7 ? ? ? A . n A 1 10 PRO 10 8 8 PRO PRO A . n A 1 11 SER 11 9 9 SER SER A . n A 1 12 ASN 12 10 10 ASN ASN A . n A 1 13 CYS 13 11 11 CYS CYS A . n A 1 14 ASP 14 12 12 ASP ASP A . n A 1 15 CYS 15 13 13 CYS CYS A . n A 1 16 LEU 16 14 14 LEU LEU A . n A 1 17 ASN 17 15 15 ASN ASN A . n A 1 18 GLY 18 16 16 GLY GLY A . n A 1 19 GLY 19 17 17 GLY GLY A . n A 1 20 THR 20 18 18 THR THR A . n A 1 21 CYS 21 19 19 CYS CYS A . n A 1 22 VAL 22 20 20 VAL VAL A . n A 1 23 SER 23 21 21 SER SER A . n A 1 24 ASN 24 22 22 ASN ASN A . n A 1 25 LYS 25 23 23 LYS LYS A . n A 1 26 TYR 26 24 24 TYR TYR A . n A 1 27 PHE 27 25 25 PHE PHE A . n A 1 28 SER 28 26 26 SER SER A . n A 1 29 ASN 29 27 27 ASN ASN A . n A 1 30 ILE 30 28 28 ILE ILE A . n A 1 31 HIS 31 29 29 HIS HIS A . n A 1 32 TRP 32 30 30 TRP TRP A . n A 1 33 CYS 33 31 31 CYS CYS A . n A 1 34 ASN 34 32 32 ASN ASN A . n A 1 35 CYS 35 33 33 CYS CYS A . n A 1 36 PRO 36 34 34 PRO PRO A . n A 1 37 LYS 37 35 35 LYS LYS A . n A 1 38 LYS 38 36 36 LYS LYS A . n A 1 39 PHE 39 37 37 PHE PHE A . n A 1 40 GLY 40 38 38 GLY GLY A . n A 1 41 GLY 41 39 39 GLY GLY A . n A 1 42 GLN 42 40 40 GLN GLN A . n A 1 43 HIS 43 41 41 HIS HIS A . n A 1 44 CYS 44 42 42 CYS CYS A . n A 1 45 GLU 45 43 43 GLU GLU A . n A 1 46 ILE 46 44 44 ILE ILE A . n A 1 47 ASP 47 45 45 ASP ASP A . n A 1 48 LYS 48 46 46 LYS LYS A . n A 1 49 SER 49 47 47 SER SER A . n A 1 50 LYS 50 48 48 LYS LYS A . n A 1 51 THR 51 49 49 THR THR A . n A 1 52 CYS 52 50 50 CYS CYS A . n A 1 53 TYR 53 51 51 TYR TYR A . n A 1 54 GLU 54 52 52 GLU GLU A . n A 1 55 GLY 55 53 53 GLY GLY A . n A 1 56 ASN 56 54 54 ASN ASN A . n A 1 57 GLY 57 55 55 GLY GLY A . n A 1 58 HIS 58 56 56 HIS HIS A . n A 1 59 PHE 59 57 57 PHE PHE A . n A 1 60 TYR 60 58 58 TYR TYR A . n A 1 61 ARG 61 59 59 ARG ARG A . n A 1 62 GLY 62 60 60 GLY GLY A . n A 1 63 LYS 63 61 61 LYS LYS A . n A 1 64 ALA 64 62 62 ALA ALA A . n A 1 65 SER 65 63 63 SER SER A . n A 1 66 THR 66 64 64 THR THR A . n A 1 67 ASP 67 65 65 ASP ASP A . n A 1 68 THR 68 66 66 THR THR A . n A 1 69 MET 69 67 67 MET MET A . n A 1 70 GLY 70 68 68 GLY GLY A . n A 1 71 ARG 71 69 69 ARG ARG A . n A 1 72 PRO 72 70 70 PRO PRO A . n A 1 73 CYS 73 71 71 CYS CYS A . n A 1 74 LEU 74 72 72 LEU LEU A . n A 1 75 PRO 75 73 73 PRO PRO A . n A 1 76 TRP 76 74 74 TRP TRP A . n A 1 77 ASN 77 75 75 ASN ASN A . n A 1 78 SER 78 76 76 SER SER A . n A 1 79 ALA 79 77 77 ALA ALA A . n A 1 80 THR 80 78 78 THR THR A . n A 1 81 VAL 81 79 79 VAL VAL A . n A 1 82 LEU 82 80 80 LEU LEU A . n A 1 83 GLN 83 81 81 GLN GLN A . n A 1 84 GLN 84 82 82 GLN GLN A . n A 1 85 THR 85 83 83 THR THR A . n A 1 86 TYR 86 84 84 TYR TYR A . n A 1 87 HIS 87 85 85 HIS HIS A . n A 1 88 ALA 88 86 86 ALA ALA A . n A 1 89 HIS 89 87 87 HIS HIS A . n A 1 90 ARG 90 88 88 ARG ARG A . n A 1 91 SER 91 89 89 SER SER A . n A 1 92 ASP 92 90 90 ASP ASP A . n A 1 93 ALA 93 91 91 ALA ALA A . n A 1 94 LEU 94 92 92 LEU LEU A . n A 1 95 GLN 95 93 93 GLN GLN A . n A 1 96 LEU 96 94 94 LEU LEU A . n A 1 97 GLY 97 95 95 GLY GLY A . n A 1 98 LEU 98 96 96 LEU LEU A . n A 1 99 GLY 99 97 97 GLY GLY A . n A 1 100 LYS 100 98 98 LYS LYS A . n A 1 101 HIS 101 99 99 HIS HIS A . n A 1 102 ASN 102 100 100 ASN ASN A . n A 1 103 TYR 103 101 101 TYR TYR A . n A 1 104 CYS 104 102 102 CYS CYS A . n A 1 105 ARG 105 103 103 ARG ARG A . n A 1 106 ASN 106 104 104 ASN ASN A . n A 1 107 PRO 107 105 105 PRO PRO A . n A 1 108 ASP 108 106 106 ASP ASP A . n A 1 109 ASN 109 107 107 ASN ASN A . n A 1 110 ARG 110 108 108 ARG ARG A . n A 1 111 ARG 111 109 109 ARG ARG A . n A 1 112 ARG 112 110 110 ARG ARG A . n A 1 113 PRO 113 111 111 PRO PRO A . n A 1 114 TRP 114 112 112 TRP TRP A . n A 1 115 CYS 115 113 113 CYS CYS A . n A 1 116 TYR 116 114 114 TYR TYR A . n A 1 117 VAL 117 115 115 VAL VAL A . n A 1 118 GLN 118 116 116 GLN GLN A . n A 1 119 VAL 119 117 117 VAL VAL A . n A 1 120 GLY 120 118 118 GLY GLY A . n A 1 121 LEU 121 119 119 LEU LEU A . n A 1 122 LYS 122 120 120 LYS LYS A . n A 1 123 PRO 123 121 121 PRO PRO A . n A 1 124 LEU 124 122 122 LEU LEU A . n A 1 125 VAL 125 123 123 VAL VAL A . n A 1 126 GLN 126 124 124 GLN GLN A . n A 1 127 GLU 127 125 125 GLU GLU A . n A 1 128 CYS 128 126 126 CYS CYS A . n A 1 129 MET 129 127 127 MET MET A . n A 1 130 VAL 130 128 128 VAL VAL A . n A 1 131 HIS 131 129 129 HIS HIS A . n A 1 132 ASP 132 130 130 ASP ASP A . n A 1 133 CYS 133 131 131 CYS CYS A . n A 1 134 ALA 134 132 132 ALA ALA A . n A 1 135 ASP 135 133 ? ? ? A . n B 2 1 GLN 1 2 2 GLN GLN B . n B 2 2 GLU 2 3 3 GLU GLU B . n B 2 3 SER 3 4 4 SER SER B . n B 2 4 CYS 4 5 5 CYS CYS B . n B 2 5 LYS 5 6 6 LYS LYS B . n B 2 6 GLY 6 7 7 GLY GLY B . n B 2 7 ARG 7 8 8 ARG ARG B . n B 2 8 CYS 8 9 9 CYS CYS B . n B 2 9 THR 9 10 10 THR THR B . n B 2 10 GLU 10 11 11 GLU GLU B . n B 2 11 GLY 11 12 12 GLY GLY B . n B 2 12 PHE 12 13 13 PHE PHE B . n B 2 13 ASN 13 14 14 ASN ASN B . n B 2 14 VAL 14 15 15 VAL VAL B . n B 2 15 ASP 15 16 16 ASP ASP B . n B 2 16 LYS 16 17 17 LYS LYS B . n B 2 17 LYS 17 18 18 LYS LYS B . n B 2 18 CYS 18 19 19 CYS CYS B . n B 2 19 GLN 19 20 20 GLN GLN B . n B 2 20 CYS 20 21 21 CYS CYS B . n B 2 21 ASP 21 22 22 ASP ASP B . n B 2 22 GLU 22 23 23 GLU GLU B . n B 2 23 LEU 23 24 24 LEU LEU B . n B 2 24 CYS 24 25 25 CYS CYS B . n B 2 25 SER 25 26 26 SER SER B . n B 2 26 TYR 26 27 27 TYR TYR B . n B 2 27 TYR 27 28 28 TYR TYR B . n B 2 28 GLN 28 29 29 GLN GLN B . n B 2 29 SER 29 30 30 SER SER B . n B 2 30 CYS 30 31 31 CYS CYS B . n B 2 31 CYS 31 32 32 CYS CYS B . n B 2 32 THR 32 33 33 THR THR B . n B 2 33 ASP 33 34 34 ASP ASP B . n B 2 34 TYR 34 35 35 TYR TYR B . n B 2 35 THR 35 36 36 THR THR B . n B 2 36 ALA 36 37 37 ALA ALA B . n B 2 37 GLU 37 38 38 GLU GLU B . n B 2 38 CYS 38 39 39 CYS CYS B . n B 2 39 LYS 39 40 40 LYS LYS B . n B 2 40 PRO 40 41 41 PRO PRO B . n C 3 1 ARG 1 -1 ? ? ? U . n C 3 2 SER 2 0 ? ? ? U . n C 3 3 LEU 3 1 1 LEU LEU U . n C 3 4 ARG 4 2 2 ARG ARG U . n C 3 5 CYS 5 3 3 CYS CYS U . n C 3 6 MET 6 4 4 MET MET U . n C 3 7 GLN 7 5 5 GLN GLN U . n C 3 8 CYS 8 6 6 CYS CYS U . n C 3 9 LYS 9 7 7 LYS LYS U . n C 3 10 THR 10 8 8 THR THR U . n C 3 11 ASN 11 9 9 ASN ASN U . n C 3 12 GLY 12 10 10 GLY GLY U . n C 3 13 ASP 13 11 11 ASP ASP U . n C 3 14 CYS 14 12 12 CYS CYS U . n C 3 15 ARG 15 13 13 ARG ARG U . n C 3 16 VAL 16 14 14 VAL VAL U . n C 3 17 GLU 17 15 15 GLU GLU U . n C 3 18 GLU 18 16 16 GLU GLU U . n C 3 19 CYS 19 17 17 CYS CYS U . n C 3 20 ALA 20 18 18 ALA ALA U . n C 3 21 LEU 21 19 19 LEU LEU U . n C 3 22 GLY 22 20 20 GLY GLY U . n C 3 23 GLN 23 21 21 GLN GLN U . n C 3 24 ASP 24 22 22 ASP ASP U . n C 3 25 LEU 25 23 23 LEU LEU U . n C 3 26 CYS 26 24 24 CYS CYS U . n C 3 27 ARG 27 25 25 ARG ARG U . n C 3 28 THR 28 26 26 THR THR U . n C 3 29 THR 29 27 27 THR THR U . n C 3 30 ILE 30 28 28 ILE ILE U . n C 3 31 VAL 31 29 29 VAL VAL U . n C 3 32 ARG 32 30 30 ARG ARG U . n C 3 33 LEU 33 31 31 LEU LEU U . n C 3 34 TRP 34 32 32 TRP TRP U . n C 3 35 GLU 35 33 33 GLU GLU U . n C 3 36 GLU 36 34 34 GLU GLU U . n C 3 37 GLY 37 35 35 GLY GLY U . n C 3 38 GLU 38 36 36 GLU GLU U . n C 3 39 GLU 39 37 37 GLU GLU U . n C 3 40 LEU 40 38 38 LEU LEU U . n C 3 41 GLU 41 39 39 GLU GLU U . n C 3 42 LEU 42 40 40 LEU LEU U . n C 3 43 VAL 43 41 41 VAL VAL U . n C 3 44 GLU 44 42 42 GLU GLU U . n C 3 45 LYS 45 43 43 LYS LYS U . n C 3 46 SER 46 44 44 SER SER U . n C 3 47 CYS 47 45 45 CYS CYS U . n C 3 48 THR 48 46 46 THR THR U . n C 3 49 HIS 49 47 47 HIS HIS U . n C 3 50 SER 50 48 48 SER SER U . n C 3 51 GLU 51 49 49 GLU GLU U . n C 3 52 LYS 52 50 50 LYS LYS U . n C 3 53 THR 53 51 51 THR THR U . n C 3 54 ASN 54 52 52 ASN ASN U . n C 3 55 ARG 55 53 53 ARG ARG U . n C 3 56 THR 56 54 54 THR THR U . n C 3 57 LEU 57 55 55 LEU LEU U . n C 3 58 SER 58 56 56 SER SER U . n C 3 59 TYR 59 57 57 TYR TYR U . n C 3 60 ARG 60 58 58 ARG ARG U . n C 3 61 THR 61 59 59 THR THR U . n C 3 62 GLY 62 60 60 GLY GLY U . n C 3 63 LEU 63 61 61 LEU LEU U . n C 3 64 LYS 64 62 62 LYS LYS U . n C 3 65 ILE 65 63 63 ILE ILE U . n C 3 66 THR 66 64 64 THR THR U . n C 3 67 SER 67 65 65 SER SER U . n C 3 68 LEU 68 66 66 LEU LEU U . n C 3 69 THR 69 67 67 THR THR U . n C 3 70 GLU 70 68 68 GLU GLU U . n C 3 71 VAL 71 69 69 VAL VAL U . n C 3 72 VAL 72 70 70 VAL VAL U . n C 3 73 CYS 73 71 71 CYS CYS U . n C 3 74 GLY 74 72 72 GLY GLY U . n C 3 75 LEU 75 73 73 LEU LEU U . n C 3 76 ASP 76 74 74 ASP ASP U . n C 3 77 LEU 77 75 75 LEU LEU U . n C 3 78 CYS 78 76 76 CYS CYS U . n C 3 79 ASN 79 77 77 ASN ASN U . n C 3 80 GLN 80 78 78 GLN GLN U . n C 3 81 GLY 81 79 79 GLY GLY U . n C 3 82 ASN 82 80 80 ASN ASN U . n C 3 83 SER 83 81 81 SER SER U . n C 3 84 GLY 84 82 82 GLY GLY U . n C 3 85 ARG 85 83 ? ? ? U . n C 3 86 ALA 86 84 ? ? ? U . n C 3 87 VAL 87 85 85 VAL VAL U . n C 3 88 THR 88 86 86 THR THR U . n C 3 89 TYR 89 87 87 TYR TYR U . n C 3 90 SER 90 88 88 SER SER U . n C 3 91 ARG 91 89 89 ARG ARG U . n C 3 92 SER 92 90 90 SER SER U . n C 3 93 ARG 93 91 91 ARG ARG U . n C 3 94 TYR 94 92 92 TYR TYR U . n C 3 95 LEU 95 93 93 LEU LEU U . n C 3 96 GLU 96 94 94 GLU GLU U . n C 3 97 CYS 97 95 95 CYS CYS U . n C 3 98 ILE 98 96 96 ILE ILE U . n C 3 99 SER 99 97 97 SER SER U . n C 3 100 CYS 100 98 98 CYS CYS U . n C 3 101 GLY 101 99 99 GLY GLY U . n C 3 102 SER 102 100 100 SER SER U . n C 3 103 SER 103 101 101 SER SER U . n C 3 104 ASP 104 102 102 ASP ASP U . n C 3 105 MET 105 103 103 MET MET U . n C 3 106 SER 106 104 104 SER SER U . n C 3 107 CYS 107 105 105 CYS CYS U . n C 3 108 GLU 108 106 106 GLU GLU U . n C 3 109 ARG 109 107 107 ARG ARG U . n C 3 110 GLY 110 108 108 GLY GLY U . n C 3 111 ARG 111 109 109 ARG ARG U . n C 3 112 HIS 112 110 110 HIS HIS U . n C 3 113 GLN 113 111 111 GLN GLN U . n C 3 114 SER 114 112 112 SER SER U . n C 3 115 LEU 115 113 113 LEU LEU U . n C 3 116 GLN 116 114 114 GLN GLN U . n C 3 117 CYS 117 115 115 CYS CYS U . n C 3 118 ARG 118 116 116 ARG ARG U . n C 3 119 SER 119 117 117 SER SER U . n C 3 120 PRO 120 118 118 PRO PRO U . n C 3 121 GLU 121 119 119 GLU GLU U . n C 3 122 GLU 122 120 120 GLU GLU U . n C 3 123 GLN 123 121 121 GLN GLN U . n C 3 124 CYS 124 122 122 CYS CYS U . n C 3 125 LEU 125 123 123 LEU LEU U . n C 3 126 ASP 126 124 124 ASP ASP U . n C 3 127 VAL 127 125 125 VAL VAL U . n C 3 128 VAL 128 126 126 VAL VAL U . n C 3 129 THR 129 127 127 THR THR U . n C 3 130 HIS 130 128 128 HIS HIS U . n C 3 131 TRP 131 129 129 TRP TRP U . n C 3 132 ILE 132 130 130 ILE ILE U . n C 3 133 GLN 133 131 131 GLN GLN U . n C 3 134 GLU 134 132 132 GLU GLU U . n C 3 135 GLY 135 133 133 GLY GLY U . n C 3 136 GLU 136 134 134 GLU GLU U . n C 3 137 GLU 137 135 135 GLU GLU U . n C 3 138 GLY 138 136 136 GLY GLY U . n C 3 139 ARG 139 137 137 ARG ARG U . n C 3 140 PRO 140 138 138 PRO PRO U . n C 3 141 LYS 141 139 139 LYS LYS U . n C 3 142 ASP 142 140 140 ASP ASP U . n C 3 143 ASP 143 141 141 ASP ASP U . n C 3 144 ARG 144 142 142 ARG ARG U . n C 3 145 HIS 145 143 143 HIS HIS U . n C 3 146 LEU 146 144 144 LEU LEU U . n C 3 147 ARG 147 145 145 ARG ARG U . n C 3 148 GLY 148 146 146 GLY GLY U . n C 3 149 CYS 149 147 147 CYS CYS U . n C 3 150 GLY 150 148 148 GLY GLY U . n C 3 151 TYR 151 149 149 TYR TYR U . n C 3 152 LEU 152 150 150 LEU LEU U . n C 3 153 PRO 153 151 151 PRO PRO U . n C 3 154 GLY 154 152 152 GLY GLY U . n C 3 155 CYS 155 153 153 CYS CYS U . n C 3 156 PRO 156 154 154 PRO PRO U . n C 3 157 GLY 157 155 155 GLY GLY U . n C 3 158 SER 158 156 156 SER SER U . n C 3 159 ASN 159 157 157 ASN ASN U . n C 3 160 GLY 160 158 158 GLY GLY U . n C 3 161 PHE 161 159 159 PHE PHE U . n C 3 162 HIS 162 160 160 HIS HIS U . n C 3 163 ASN 163 161 161 ASN ASN U . n C 3 164 ASN 164 162 162 ASN ASN U . n C 3 165 ASP 165 163 163 ASP ASP U . n C 3 166 THR 166 164 164 THR THR U . n C 3 167 PHE 167 165 165 PHE PHE U . n C 3 168 HIS 168 166 166 HIS HIS U . n C 3 169 PHE 169 167 167 PHE PHE U . n C 3 170 LEU 170 168 168 LEU LEU U . n C 3 171 LYS 171 169 169 LYS LYS U . n C 3 172 CYS 172 170 170 CYS CYS U . n C 3 173 CYS 173 171 171 CYS CYS U . n C 3 174 ASN 174 172 172 ASN ASN U . n C 3 175 THR 175 173 173 THR THR U . n C 3 176 THR 176 174 174 THR THR U . n C 3 177 LYS 177 175 175 LYS LYS U . n C 3 178 CYS 178 176 176 CYS CYS U . n C 3 179 ASN 179 177 177 ASN ASN U . n C 3 180 GLU 180 178 178 GLU GLU U . n C 3 181 GLY 181 179 179 GLY GLY U . n C 3 182 PRO 182 180 180 PRO PRO U . n C 3 183 ILE 183 181 181 ILE ILE U . n C 3 184 LEU 184 182 182 LEU LEU U . n C 3 185 GLU 185 183 183 GLU GLU U . n C 3 186 LEU 186 184 184 LEU LEU U . n C 3 187 GLU 187 185 185 GLU GLU U . n C 3 188 ASN 188 186 186 ASN ASN U . n C 3 189 LEU 189 187 187 LEU LEU U . n C 3 190 PRO 190 188 188 PRO PRO U . n C 3 191 GLN 191 189 189 GLN GLN U . n C 3 192 ASN 192 190 190 ASN ASN U . n C 3 193 GLY 193 191 191 GLY GLY U . n C 3 194 ARG 194 192 192 ARG ARG U . n C 3 195 GLN 195 193 193 GLN GLN U . n C 3 196 CYS 196 194 194 CYS CYS U . n C 3 197 TYR 197 195 195 TYR TYR U . n C 3 198 SER 198 196 196 SER SER U . n C 3 199 CYS 199 197 197 CYS CYS U . n C 3 200 LYS 200 198 198 LYS LYS U . n C 3 201 GLY 201 199 199 GLY GLY U . n C 3 202 ASN 202 200 200 ASN ASN U . n C 3 203 SER 203 201 201 SER SER U . n C 3 204 THR 204 202 202 THR THR U . n C 3 205 HIS 205 203 203 HIS HIS U . n C 3 206 GLY 206 204 204 GLY GLY U . n C 3 207 CYS 207 205 205 CYS CYS U . n C 3 208 SER 208 206 206 SER SER U . n C 3 209 SER 209 207 207 SER SER U . n C 3 210 GLU 210 208 208 GLU GLU U . n C 3 211 GLU 211 209 209 GLU GLU U . n C 3 212 THR 212 210 210 THR THR U . n C 3 213 PHE 213 211 211 PHE PHE U . n C 3 214 LEU 214 212 212 LEU LEU U . n C 3 215 ILE 215 213 213 ILE ILE U . n C 3 216 ASP 216 214 214 ASP ASP U . n C 3 217 CYS 217 215 215 CYS CYS U . n C 3 218 ARG 218 216 216 ARG ARG U . n C 3 219 GLY 219 217 217 GLY GLY U . n C 3 220 PRO 220 218 218 PRO PRO U . n C 3 221 MET 221 219 219 MET MET U . n C 3 222 ASN 222 220 220 ASN ASN U . n C 3 223 GLN 223 221 221 GLN GLN U . n C 3 224 CYS 224 222 222 CYS CYS U . n C 3 225 LEU 225 223 223 LEU LEU U . n C 3 226 VAL 226 224 224 VAL VAL U . n C 3 227 ALA 227 225 225 ALA ALA U . n C 3 228 THR 228 226 226 THR THR U . n C 3 229 GLY 229 227 227 GLY GLY U . n C 3 230 THR 230 228 228 THR THR U . n C 3 231 HIS 231 229 229 HIS HIS U . n C 3 232 GLU 232 230 230 GLU GLU U . n C 3 233 PRO 233 231 231 PRO PRO U . n C 3 234 LYS 234 232 232 LYS LYS U . n C 3 235 ASN 235 233 233 ASN ASN U . n C 3 236 GLN 236 234 234 GLN GLN U . n C 3 237 SER 237 235 235 SER SER U . n C 3 238 TYR 238 236 236 TYR TYR U . n C 3 239 MET 239 237 237 MET MET U . n C 3 240 VAL 240 238 238 VAL VAL U . n C 3 241 ARG 241 239 239 ARG ARG U . n C 3 242 GLY 242 240 240 GLY GLY U . n C 3 243 CYS 243 241 241 CYS CYS U . n C 3 244 ALA 244 242 242 ALA ALA U . n C 3 245 THR 245 243 243 THR THR U . n C 3 246 ALA 246 244 244 ALA ALA U . n C 3 247 SER 247 245 245 SER SER U . n C 3 248 MET 248 246 246 MET MET U . n C 3 249 CYS 249 247 247 CYS CYS U . n C 3 250 GLN 250 248 248 GLN GLN U . n C 3 251 HIS 251 249 249 HIS HIS U . n C 3 252 ALA 252 250 250 ALA ALA U . n C 3 253 HIS 253 251 251 HIS HIS U . n C 3 254 LEU 254 252 252 LEU LEU U . n C 3 255 GLY 255 253 253 GLY GLY U . n C 3 256 ASP 256 254 254 ASP ASP U . n C 3 257 ALA 257 255 255 ALA ALA U . n C 3 258 PHE 258 256 256 PHE PHE U . n C 3 259 SER 259 257 257 SER SER U . n C 3 260 MET 260 258 258 MET MET U . n C 3 261 ASN 261 259 259 ASN ASN U . n C 3 262 HIS 262 260 260 HIS HIS U . n C 3 263 ILE 263 261 261 ILE ILE U . n C 3 264 ASP 264 262 262 ASP ASP U . n C 3 265 VAL 265 263 263 VAL VAL U . n C 3 266 SER 266 264 264 SER SER U . n C 3 267 CYS 267 265 265 CYS CYS U . n C 3 268 CYS 268 266 266 CYS CYS U . n C 3 269 THR 269 267 267 THR THR U . n C 3 270 LYS 270 268 268 LYS LYS U . n C 3 271 SER 271 269 269 SER SER U . n C 3 272 GLY 272 270 270 GLY GLY U . n C 3 273 CYS 273 271 271 CYS CYS U . n C 3 274 ASN 274 272 272 ASN ASN U . n C 3 275 HIS 275 273 273 HIS HIS U . n C 3 276 PRO 276 274 274 PRO PRO U . n C 3 277 ASP 277 275 275 ASP ASP U . n C 3 278 LEU 278 276 ? ? ? U . n C 3 279 ASP 279 277 ? ? ? U . n C 3 280 VAL 280 278 ? ? ? U . n C 3 281 GLN 281 279 ? ? ? U . n C 3 282 TYR 282 280 ? ? ? U . n C 3 283 ARG 283 281 ? ? ? U . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 NAG 1 1052 1052 NAG NAG U . F 5 NAG 1 1172 1172 NAG NAG U . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 C ASN 54 U ASN 52 ? ASN 'GLYCOSYLATION SITE' 2 C ASN 174 U ASN 172 ? ASN 'GLYCOSYLATION SITE' 3 C ASN 202 U ASN 200 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4650 ? 1 MORE 1 ? 1 'SSA (A^2)' 22940 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-03-25 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2019-12-11 4 'Structure model' 1 3 2019-12-18 5 'Structure model' 2 0 2020-07-29 6 'Structure model' 2 1 2023-11-01 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Non-polymer description' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' Advisory 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Derived calculations' 7 5 'Structure model' Advisory 8 5 'Structure model' 'Atomic model' 9 5 'Structure model' 'Data collection' 10 5 'Structure model' 'Derived calculations' 11 5 'Structure model' 'Structure summary' 12 6 'Structure model' 'Data collection' 13 6 'Structure model' 'Database references' 14 6 'Structure model' 'Refinement description' 15 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_PDB_caveat 2 3 'Structure model' pdbx_validate_close_contact 3 3 'Structure model' struct_conn 4 3 'Structure model' struct_ref_seq_dif 5 4 'Structure model' pdbx_struct_assembly 6 4 'Structure model' pdbx_struct_assembly_gen 7 4 'Structure model' pdbx_struct_assembly_prop 8 5 'Structure model' atom_site 9 5 'Structure model' chem_comp 10 5 'Structure model' database_PDB_caveat 11 5 'Structure model' entity 12 5 'Structure model' pdbx_branch_scheme 13 5 'Structure model' pdbx_chem_comp_identifier 14 5 'Structure model' pdbx_entity_branch 15 5 'Structure model' pdbx_entity_branch_descriptor 16 5 'Structure model' pdbx_entity_branch_link 17 5 'Structure model' pdbx_entity_branch_list 18 5 'Structure model' pdbx_entity_nonpoly 19 5 'Structure model' pdbx_nonpoly_scheme 20 5 'Structure model' pdbx_struct_assembly_gen 21 5 'Structure model' pdbx_validate_chiral 22 5 'Structure model' struct_asym 23 5 'Structure model' struct_conn 24 5 'Structure model' struct_site 25 5 'Structure model' struct_site_gen 26 6 'Structure model' chem_comp 27 6 'Structure model' chem_comp_atom 28 6 'Structure model' chem_comp_bond 29 6 'Structure model' database_2 30 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_struct_ref_seq_dif.details' 2 4 'Structure model' '_pdbx_struct_assembly_prop.biol_id' 3 4 'Structure model' '_pdbx_struct_assembly_prop.value' 4 5 'Structure model' '_atom_site.B_iso_or_equiv' 5 5 'Structure model' '_atom_site.Cartn_x' 6 5 'Structure model' '_atom_site.Cartn_y' 7 5 'Structure model' '_atom_site.Cartn_z' 8 5 'Structure model' '_atom_site.auth_asym_id' 9 5 'Structure model' '_atom_site.auth_atom_id' 10 5 'Structure model' '_atom_site.auth_comp_id' 11 5 'Structure model' '_atom_site.auth_seq_id' 12 5 'Structure model' '_atom_site.label_asym_id' 13 5 'Structure model' '_atom_site.label_atom_id' 14 5 'Structure model' '_atom_site.label_comp_id' 15 5 'Structure model' '_atom_site.label_entity_id' 16 5 'Structure model' '_atom_site.type_symbol' 17 5 'Structure model' '_chem_comp.name' 18 5 'Structure model' '_chem_comp.type' 19 5 'Structure model' '_database_PDB_caveat.text' 20 5 'Structure model' '_entity.formula_weight' 21 5 'Structure model' '_entity.pdbx_description' 22 5 'Structure model' '_entity.pdbx_number_of_molecules' 23 5 'Structure model' '_entity.type' 24 5 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 25 5 'Structure model' '_pdbx_validate_chiral.auth_asym_id' 26 5 'Structure model' '_pdbx_validate_chiral.auth_seq_id' 27 5 'Structure model' '_pdbx_validate_chiral.details' 28 5 'Structure model' '_struct_conn.pdbx_role' 29 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 30 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 31 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 32 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 33 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 34 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 35 6 'Structure model' '_chem_comp.pdbx_synonyms' 36 6 'Structure model' '_database_2.pdbx_DOI' 37 6 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.3.0037 ? 1 HKL-2000 'data reduction' . ? 2 HKL-2000 'data scaling' . ? 3 AMoRE phasing . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 ND2 U ASN 52 ? ? O5 U NAG 1052 ? ? 1.68 2 1 SG U CYS 3 ? ? SG U CYS 17 ? ? 2.11 3 1 SG B CYS 5 ? ? SG B CYS 32 ? ? 2.13 4 1 O U THR 54 ? ? O U LEU 66 ? ? 2.13 5 1 O U LEU 1 ? ? N U CYS 17 ? ? 2.19 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CB _pdbx_validate_rmsd_bond.auth_asym_id_1 U _pdbx_validate_rmsd_bond.auth_comp_id_1 GLU _pdbx_validate_rmsd_bond.auth_seq_id_1 33 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CG _pdbx_validate_rmsd_bond.auth_asym_id_2 U _pdbx_validate_rmsd_bond.auth_comp_id_2 GLU _pdbx_validate_rmsd_bond.auth_seq_id_2 33 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.631 _pdbx_validate_rmsd_bond.bond_target_value 1.517 _pdbx_validate_rmsd_bond.bond_deviation 0.114 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.019 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 U _pdbx_validate_rmsd_angle.auth_comp_id_1 LEU _pdbx_validate_rmsd_angle.auth_seq_id_1 144 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CB _pdbx_validate_rmsd_angle.auth_asym_id_2 U _pdbx_validate_rmsd_angle.auth_comp_id_2 LEU _pdbx_validate_rmsd_angle.auth_seq_id_2 144 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CG _pdbx_validate_rmsd_angle.auth_asym_id_3 U _pdbx_validate_rmsd_angle.auth_comp_id_3 LEU _pdbx_validate_rmsd_angle.auth_seq_id_3 144 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 129.75 _pdbx_validate_rmsd_angle.angle_target_value 115.30 _pdbx_validate_rmsd_angle.angle_deviation 14.45 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 11 ? ? 69.08 167.92 2 1 ASP A 12 ? ? -94.37 42.10 3 1 ASN A 27 ? ? 39.56 32.15 4 1 LYS A 35 ? ? 57.64 -110.11 5 1 ASN A 54 ? ? 84.43 -63.35 6 1 ARG A 59 ? ? -108.14 -144.84 7 1 ALA A 62 ? ? 118.00 116.50 8 1 ASP A 65 ? ? -90.74 -159.94 9 1 ARG A 88 ? ? -157.12 49.50 10 1 SER A 89 ? ? 46.39 -88.98 11 1 ASP A 90 ? ? -57.06 -1.71 12 1 ASN A 107 ? ? 36.37 54.00 13 1 LEU A 119 ? ? -90.16 -106.09 14 1 LYS A 120 ? ? -15.37 112.22 15 1 MET A 127 ? ? -43.29 75.19 16 1 GLU B 3 ? ? -105.76 -112.16 17 1 SER B 4 ? ? 55.68 124.42 18 1 ARG B 8 ? ? 62.75 -61.25 19 1 CYS B 9 ? ? 80.47 -7.45 20 1 THR B 10 ? ? -154.52 56.91 21 1 LYS B 18 ? ? -67.39 -108.97 22 1 CYS B 39 ? ? -118.12 70.63 23 1 LYS B 40 ? ? 176.93 47.34 24 1 GLU U 16 ? ? -64.72 98.47 25 1 CYS U 17 ? ? -54.25 56.48 26 1 ALA U 18 ? ? 77.85 -163.95 27 1 LEU U 19 ? ? -96.46 -144.77 28 1 ASP U 22 ? ? -156.04 71.58 29 1 GLU U 34 ? ? 33.40 -127.95 30 1 SER U 44 ? ? 176.30 168.00 31 1 CYS U 45 ? ? -45.69 163.19 32 1 THR U 54 ? ? -126.09 -62.43 33 1 LEU U 55 ? ? 50.97 122.83 34 1 ASP U 74 ? ? -45.88 97.07 35 1 LEU U 75 ? ? 66.42 104.65 36 1 CYS U 76 ? ? -153.65 -2.51 37 1 GLN U 78 ? ? -27.79 124.03 38 1 SER U 81 ? ? -57.59 -179.13 39 1 THR U 86 ? ? 159.23 112.80 40 1 TYR U 92 ? ? -110.94 -120.52 41 1 MET U 103 ? ? 59.06 5.99 42 1 GLN U 131 ? ? -172.55 -102.54 43 1 GLU U 135 ? ? 178.78 44.07 44 1 ARG U 137 ? ? 71.91 166.04 45 1 PRO U 138 ? ? -33.04 148.39 46 1 CYS U 153 ? ? -118.98 -74.12 47 1 PRO U 154 ? ? -34.20 125.10 48 1 ASN U 162 ? ? -39.62 -34.46 49 1 ASP U 163 ? ? -143.26 26.10 50 1 CYS U 170 ? ? -167.46 106.03 51 1 LYS U 175 ? ? 52.58 18.61 52 1 CYS U 176 ? ? -58.62 -6.42 53 1 LEU U 184 ? ? 64.97 -75.13 54 1 GLU U 185 ? ? -59.28 56.15 55 1 ASN U 186 ? ? 176.83 -25.03 56 1 HIS U 203 ? ? 45.55 107.00 57 1 CYS U 205 ? ? -117.06 66.92 58 1 PRO U 231 ? ? 10.28 53.46 59 1 LYS U 232 ? ? 35.42 42.70 60 1 SER U 235 ? ? 86.77 -26.51 61 1 TYR U 236 ? ? -29.65 127.20 62 1 HIS U 249 ? ? 76.70 165.86 63 1 HIS U 260 ? ? 30.84 70.29 64 1 CYS U 271 ? ? -61.34 16.19 65 1 PRO U 274 ? ? -50.99 -2.84 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 GLU U 16 ? ? CYS U 17 ? ? -137.00 2 1 GLU U 185 ? ? ASN U 186 ? ? -146.32 3 1 GLU U 230 ? ? PRO U 231 ? ? -120.32 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C1 ? C NAG 1 ? 'WRONG HAND' . 2 1 C1 ? U NAG 1172 ? PLANAR . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ARG -1 ? A ARG 1 2 1 Y 1 A SER 0 ? A SER 2 3 1 Y 1 A SER 1 ? A SER 3 4 1 Y 1 A ASN 2 ? A ASN 4 5 1 Y 1 A GLU 3 ? A GLU 5 6 1 Y 1 A LEU 4 ? A LEU 6 7 1 Y 1 A HIS 5 ? A HIS 7 8 1 Y 1 A GLN 6 ? A GLN 8 9 1 Y 1 A VAL 7 ? A VAL 9 10 1 Y 1 A ASP 133 ? A ASP 135 11 1 Y 1 U ARG -1 ? C ARG 1 12 1 Y 1 U SER 0 ? C SER 2 13 1 Y 1 U ARG 83 ? C ARG 85 14 1 Y 1 U ALA 84 ? C ALA 86 15 1 Y 1 U LEU 276 ? C LEU 278 16 1 Y 1 U ASP 277 ? C ASP 279 17 1 Y 1 U VAL 278 ? C VAL 280 18 1 Y 1 U GLN 279 ? C GLN 281 19 1 Y 1 U TYR 280 ? C TYR 282 20 1 Y 1 U ARG 281 ? C ARG 283 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MAN C1 C N S 227 MAN C2 C N S 228 MAN C3 C N S 229 MAN C4 C N S 230 MAN C5 C N R 231 MAN C6 C N N 232 MAN O1 O N N 233 MAN O2 O N N 234 MAN O3 O N N 235 MAN O4 O N N 236 MAN O5 O N N 237 MAN O6 O N N 238 MAN H1 H N N 239 MAN H2 H N N 240 MAN H3 H N N 241 MAN H4 H N N 242 MAN H5 H N N 243 MAN H61 H N N 244 MAN H62 H N N 245 MAN HO1 H N N 246 MAN HO2 H N N 247 MAN HO3 H N N 248 MAN HO4 H N N 249 MAN HO6 H N N 250 MET N N N N 251 MET CA C N S 252 MET C C N N 253 MET O O N N 254 MET CB C N N 255 MET CG C N N 256 MET SD S N N 257 MET CE C N N 258 MET OXT O N N 259 MET H H N N 260 MET H2 H N N 261 MET HA H N N 262 MET HB2 H N N 263 MET HB3 H N N 264 MET HG2 H N N 265 MET HG3 H N N 266 MET HE1 H N N 267 MET HE2 H N N 268 MET HE3 H N N 269 MET HXT H N N 270 NAG C1 C N R 271 NAG C2 C N R 272 NAG C3 C N R 273 NAG C4 C N S 274 NAG C5 C N R 275 NAG C6 C N N 276 NAG C7 C N N 277 NAG C8 C N N 278 NAG N2 N N N 279 NAG O1 O N N 280 NAG O3 O N N 281 NAG O4 O N N 282 NAG O5 O N N 283 NAG O6 O N N 284 NAG O7 O N N 285 NAG H1 H N N 286 NAG H2 H N N 287 NAG H3 H N N 288 NAG H4 H N N 289 NAG H5 H N N 290 NAG H61 H N N 291 NAG H62 H N N 292 NAG H81 H N N 293 NAG H82 H N N 294 NAG H83 H N N 295 NAG HN2 H N N 296 NAG HO1 H N N 297 NAG HO3 H N N 298 NAG HO4 H N N 299 NAG HO6 H N N 300 PHE N N N N 301 PHE CA C N S 302 PHE C C N N 303 PHE O O N N 304 PHE CB C N N 305 PHE CG C Y N 306 PHE CD1 C Y N 307 PHE CD2 C Y N 308 PHE CE1 C Y N 309 PHE CE2 C Y N 310 PHE CZ C Y N 311 PHE OXT O N N 312 PHE H H N N 313 PHE H2 H N N 314 PHE HA H N N 315 PHE HB2 H N N 316 PHE HB3 H N N 317 PHE HD1 H N N 318 PHE HD2 H N N 319 PHE HE1 H N N 320 PHE HE2 H N N 321 PHE HZ H N N 322 PHE HXT H N N 323 PRO N N N N 324 PRO CA C N S 325 PRO C C N N 326 PRO O O N N 327 PRO CB C N N 328 PRO CG C N N 329 PRO CD C N N 330 PRO OXT O N N 331 PRO H H N N 332 PRO HA H N N 333 PRO HB2 H N N 334 PRO HB3 H N N 335 PRO HG2 H N N 336 PRO HG3 H N N 337 PRO HD2 H N N 338 PRO HD3 H N N 339 PRO HXT H N N 340 SER N N N N 341 SER CA C N S 342 SER C C N N 343 SER O O N N 344 SER CB C N N 345 SER OG O N N 346 SER OXT O N N 347 SER H H N N 348 SER H2 H N N 349 SER HA H N N 350 SER HB2 H N N 351 SER HB3 H N N 352 SER HG H N N 353 SER HXT H N N 354 THR N N N N 355 THR CA C N S 356 THR C C N N 357 THR O O N N 358 THR CB C N R 359 THR OG1 O N N 360 THR CG2 C N N 361 THR OXT O N N 362 THR H H N N 363 THR H2 H N N 364 THR HA H N N 365 THR HB H N N 366 THR HG1 H N N 367 THR HG21 H N N 368 THR HG22 H N N 369 THR HG23 H N N 370 THR HXT H N N 371 TRP N N N N 372 TRP CA C N S 373 TRP C C N N 374 TRP O O N N 375 TRP CB C N N 376 TRP CG C Y N 377 TRP CD1 C Y N 378 TRP CD2 C Y N 379 TRP NE1 N Y N 380 TRP CE2 C Y N 381 TRP CE3 C Y N 382 TRP CZ2 C Y N 383 TRP CZ3 C Y N 384 TRP CH2 C Y N 385 TRP OXT O N N 386 TRP H H N N 387 TRP H2 H N N 388 TRP HA H N N 389 TRP HB2 H N N 390 TRP HB3 H N N 391 TRP HD1 H N N 392 TRP HE1 H N N 393 TRP HE3 H N N 394 TRP HZ2 H N N 395 TRP HZ3 H N N 396 TRP HH2 H N N 397 TRP HXT H N N 398 TYR N N N N 399 TYR CA C N S 400 TYR C C N N 401 TYR O O N N 402 TYR CB C N N 403 TYR CG C Y N 404 TYR CD1 C Y N 405 TYR CD2 C Y N 406 TYR CE1 C Y N 407 TYR CE2 C Y N 408 TYR CZ C Y N 409 TYR OH O N N 410 TYR OXT O N N 411 TYR H H N N 412 TYR H2 H N N 413 TYR HA H N N 414 TYR HB2 H N N 415 TYR HB3 H N N 416 TYR HD1 H N N 417 TYR HD2 H N N 418 TYR HE1 H N N 419 TYR HE2 H N N 420 TYR HH H N N 421 TYR HXT H N N 422 VAL N N N N 423 VAL CA C N S 424 VAL C C N N 425 VAL O O N N 426 VAL CB C N N 427 VAL CG1 C N N 428 VAL CG2 C N N 429 VAL OXT O N N 430 VAL H H N N 431 VAL H2 H N N 432 VAL HA H N N 433 VAL HB H N N 434 VAL HG11 H N N 435 VAL HG12 H N N 436 VAL HG13 H N N 437 VAL HG21 H N N 438 VAL HG22 H N N 439 VAL HG23 H N N 440 VAL HXT H N N 441 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MAN C1 C2 sing N N 216 MAN C1 O1 sing N N 217 MAN C1 O5 sing N N 218 MAN C1 H1 sing N N 219 MAN C2 C3 sing N N 220 MAN C2 O2 sing N N 221 MAN C2 H2 sing N N 222 MAN C3 C4 sing N N 223 MAN C3 O3 sing N N 224 MAN C3 H3 sing N N 225 MAN C4 C5 sing N N 226 MAN C4 O4 sing N N 227 MAN C4 H4 sing N N 228 MAN C5 C6 sing N N 229 MAN C5 O5 sing N N 230 MAN C5 H5 sing N N 231 MAN C6 O6 sing N N 232 MAN C6 H61 sing N N 233 MAN C6 H62 sing N N 234 MAN O1 HO1 sing N N 235 MAN O2 HO2 sing N N 236 MAN O3 HO3 sing N N 237 MAN O4 HO4 sing N N 238 MAN O6 HO6 sing N N 239 MET N CA sing N N 240 MET N H sing N N 241 MET N H2 sing N N 242 MET CA C sing N N 243 MET CA CB sing N N 244 MET CA HA sing N N 245 MET C O doub N N 246 MET C OXT sing N N 247 MET CB CG sing N N 248 MET CB HB2 sing N N 249 MET CB HB3 sing N N 250 MET CG SD sing N N 251 MET CG HG2 sing N N 252 MET CG HG3 sing N N 253 MET SD CE sing N N 254 MET CE HE1 sing N N 255 MET CE HE2 sing N N 256 MET CE HE3 sing N N 257 MET OXT HXT sing N N 258 NAG C1 C2 sing N N 259 NAG C1 O1 sing N N 260 NAG C1 O5 sing N N 261 NAG C1 H1 sing N N 262 NAG C2 C3 sing N N 263 NAG C2 N2 sing N N 264 NAG C2 H2 sing N N 265 NAG C3 C4 sing N N 266 NAG C3 O3 sing N N 267 NAG C3 H3 sing N N 268 NAG C4 C5 sing N N 269 NAG C4 O4 sing N N 270 NAG C4 H4 sing N N 271 NAG C5 C6 sing N N 272 NAG C5 O5 sing N N 273 NAG C5 H5 sing N N 274 NAG C6 O6 sing N N 275 NAG C6 H61 sing N N 276 NAG C6 H62 sing N N 277 NAG C7 C8 sing N N 278 NAG C7 N2 sing N N 279 NAG C7 O7 doub N N 280 NAG C8 H81 sing N N 281 NAG C8 H82 sing N N 282 NAG C8 H83 sing N N 283 NAG N2 HN2 sing N N 284 NAG O1 HO1 sing N N 285 NAG O3 HO3 sing N N 286 NAG O4 HO4 sing N N 287 NAG O6 HO6 sing N N 288 PHE N CA sing N N 289 PHE N H sing N N 290 PHE N H2 sing N N 291 PHE CA C sing N N 292 PHE CA CB sing N N 293 PHE CA HA sing N N 294 PHE C O doub N N 295 PHE C OXT sing N N 296 PHE CB CG sing N N 297 PHE CB HB2 sing N N 298 PHE CB HB3 sing N N 299 PHE CG CD1 doub Y N 300 PHE CG CD2 sing Y N 301 PHE CD1 CE1 sing Y N 302 PHE CD1 HD1 sing N N 303 PHE CD2 CE2 doub Y N 304 PHE CD2 HD2 sing N N 305 PHE CE1 CZ doub Y N 306 PHE CE1 HE1 sing N N 307 PHE CE2 CZ sing Y N 308 PHE CE2 HE2 sing N N 309 PHE CZ HZ sing N N 310 PHE OXT HXT sing N N 311 PRO N CA sing N N 312 PRO N CD sing N N 313 PRO N H sing N N 314 PRO CA C sing N N 315 PRO CA CB sing N N 316 PRO CA HA sing N N 317 PRO C O doub N N 318 PRO C OXT sing N N 319 PRO CB CG sing N N 320 PRO CB HB2 sing N N 321 PRO CB HB3 sing N N 322 PRO CG CD sing N N 323 PRO CG HG2 sing N N 324 PRO CG HG3 sing N N 325 PRO CD HD2 sing N N 326 PRO CD HD3 sing N N 327 PRO OXT HXT sing N N 328 SER N CA sing N N 329 SER N H sing N N 330 SER N H2 sing N N 331 SER CA C sing N N 332 SER CA CB sing N N 333 SER CA HA sing N N 334 SER C O doub N N 335 SER C OXT sing N N 336 SER CB OG sing N N 337 SER CB HB2 sing N N 338 SER CB HB3 sing N N 339 SER OG HG sing N N 340 SER OXT HXT sing N N 341 THR N CA sing N N 342 THR N H sing N N 343 THR N H2 sing N N 344 THR CA C sing N N 345 THR CA CB sing N N 346 THR CA HA sing N N 347 THR C O doub N N 348 THR C OXT sing N N 349 THR CB OG1 sing N N 350 THR CB CG2 sing N N 351 THR CB HB sing N N 352 THR OG1 HG1 sing N N 353 THR CG2 HG21 sing N N 354 THR CG2 HG22 sing N N 355 THR CG2 HG23 sing N N 356 THR OXT HXT sing N N 357 TRP N CA sing N N 358 TRP N H sing N N 359 TRP N H2 sing N N 360 TRP CA C sing N N 361 TRP CA CB sing N N 362 TRP CA HA sing N N 363 TRP C O doub N N 364 TRP C OXT sing N N 365 TRP CB CG sing N N 366 TRP CB HB2 sing N N 367 TRP CB HB3 sing N N 368 TRP CG CD1 doub Y N 369 TRP CG CD2 sing Y N 370 TRP CD1 NE1 sing Y N 371 TRP CD1 HD1 sing N N 372 TRP CD2 CE2 doub Y N 373 TRP CD2 CE3 sing Y N 374 TRP NE1 CE2 sing Y N 375 TRP NE1 HE1 sing N N 376 TRP CE2 CZ2 sing Y N 377 TRP CE3 CZ3 doub Y N 378 TRP CE3 HE3 sing N N 379 TRP CZ2 CH2 doub Y N 380 TRP CZ2 HZ2 sing N N 381 TRP CZ3 CH2 sing Y N 382 TRP CZ3 HZ3 sing N N 383 TRP CH2 HH2 sing N N 384 TRP OXT HXT sing N N 385 TYR N CA sing N N 386 TYR N H sing N N 387 TYR N H2 sing N N 388 TYR CA C sing N N 389 TYR CA CB sing N N 390 TYR CA HA sing N N 391 TYR C O doub N N 392 TYR C OXT sing N N 393 TYR CB CG sing N N 394 TYR CB HB2 sing N N 395 TYR CB HB3 sing N N 396 TYR CG CD1 doub Y N 397 TYR CG CD2 sing Y N 398 TYR CD1 CE1 sing Y N 399 TYR CD1 HD1 sing N N 400 TYR CD2 CE2 doub Y N 401 TYR CD2 HD2 sing N N 402 TYR CE1 CZ doub Y N 403 TYR CE1 HE1 sing N N 404 TYR CE2 CZ sing Y N 405 TYR CE2 HE2 sing N N 406 TYR CZ OH sing N N 407 TYR OH HH sing N N 408 TYR OXT HXT sing N N 409 VAL N CA sing N N 410 VAL N H sing N N 411 VAL N H2 sing N N 412 VAL CA C sing N N 413 VAL CA CB sing N N 414 VAL CA HA sing N N 415 VAL C O doub N N 416 VAL C OXT sing N N 417 VAL CB CG1 sing N N 418 VAL CB CG2 sing N N 419 VAL CB HB sing N N 420 VAL CG1 HG11 sing N N 421 VAL CG1 HG12 sing N N 422 VAL CG1 HG13 sing N N 423 VAL CG2 HG21 sing N N 424 VAL CG2 HG22 sing N N 425 VAL CG2 HG23 sing N N 426 VAL OXT HXT sing N N 427 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero D 4 NAG 1 C NAG 1 U NAG 1200 n D 4 NAG 2 C NAG 2 U NAG 1201 n D 4 MAN 3 C MAN 3 U MAN 1202 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 4 DManpa1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 4 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1a_1-5]/1-1-2/a4-b1_b4-c1' WURCS PDB2Glycan 1.1.0 3 4 '[]{[(4+1)][a-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][a-D-Manp]{}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 4 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 4 3 MAN C1 O1 2 NAG O4 HO4 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 4 NAG 1 n 4 NAG 2 n 4 MAN 3 n # _pdbx_entity_nonpoly.entity_id 5 _pdbx_entity_nonpoly.name 2-acetamido-2-deoxy-beta-D-glucopyranose _pdbx_entity_nonpoly.comp_id NAG # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2FD6 _pdbx_initial_refinement_model.details 'PDB ENTRY 2FD6' #