HEADER TRANSCRIPTION 31-DEC-07 3BTV TITLE CRYSTAL STRUCTURE OF THE SUPER-REPRESSOR MUTANT OF GAL80P FROM TITLE 2 SACCHAROMYCES CEREVISIAE; GAL80(S0)-[G301R] COMPND MOL_ID: 1; COMPND 2 MOLECULE: GALACTOSE/LACTOSE METABOLISM REGULATORY PROTEIN GAL80; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: GAL80; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-RIPL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS EUKARYOTIC TRANSCRIPTION REPRESSOR, ACETYLATION, CARBOHYDRATE KEYWDS 2 METABOLISM, DNA-BINDING, GALACTOSE METABOLISM, TRANSCRIPTION KEYWDS 3 REGULATION, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR P.R.KUMAR,L.JOSHUA-TOR REVDAT 5 30-AUG-23 3BTV 1 REMARK REVDAT 4 20-OCT-21 3BTV 1 SEQADV REVDAT 3 26-MAY-09 3BTV 1 REMARK REVDAT 2 24-FEB-09 3BTV 1 VERSN REVDAT 1 04-MAR-08 3BTV 0 JRNL AUTH P.R.KUMAR,Y.YU,R.STERNGLANZ,S.A.JOHNSTON,L.JOSHUA-TOR JRNL TITL NADP REGULATES THE YEAST GAL INDUCTION SYSTEM. JRNL REF SCIENCE V. 319 1090 2008 JRNL REFN ISSN 0036-8075 JRNL PMID 18292341 JRNL DOI 10.1126/SCIENCE.1151903 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 56866 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 2867 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 2.1400 - 2.1000 0.99 2636 137 0.2735 0.3350 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 SOLVENT RADIUS : 1.40 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.165 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.56 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESID 1:155 REMARK 3 ORIGIN FOR THE GROUP (A): 17.3067 9.4712 30.4042 REMARK 3 T TENSOR REMARK 3 T11: 0.4281 T22: 0.2101 REMARK 3 T33: 0.2162 T12: -0.0241 REMARK 3 T13: -0.0405 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 1.0690 L22: 1.8160 REMARK 3 L33: 0.6575 L12: -0.6505 REMARK 3 L13: 0.2588 L23: 0.0878 REMARK 3 S TENSOR REMARK 3 S11: 0.0927 S12: 0.0428 S13: -0.2890 REMARK 3 S21: -0.5493 S22: -0.1151 S23: 0.2792 REMARK 3 S31: -0.0031 S32: 0.1049 S33: -0.0019 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESID 156:330 REMARK 3 ORIGIN FOR THE GROUP (A): 26.8882 12.0967 56.7118 REMARK 3 T TENSOR REMARK 3 T11: 0.2486 T22: 0.2436 REMARK 3 T33: 0.3538 T12: 0.0237 REMARK 3 T13: 0.0657 T23: 0.0787 REMARK 3 L TENSOR REMARK 3 L11: 0.7175 L22: 1.2531 REMARK 3 L33: 0.3489 L12: 0.7575 REMARK 3 L13: 0.5701 L23: -0.4657 REMARK 3 S TENSOR REMARK 3 S11: -0.1150 S12: -0.2615 S13: -0.1660 REMARK 3 S21: -0.0647 S22: 0.0768 S23: -0.2070 REMARK 3 S31: 0.0509 S32: 0.0346 S33: -0.0008 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND RESID 345:435 REMARK 3 ORIGIN FOR THE GROUP (A): 15.0249 3.7600 49.3364 REMARK 3 T TENSOR REMARK 3 T11: 0.2778 T22: 0.2258 REMARK 3 T33: 0.4248 T12: -0.0283 REMARK 3 T13: 0.0147 T23: 0.1047 REMARK 3 L TENSOR REMARK 3 L11: 1.3550 L22: 0.8827 REMARK 3 L33: 1.4162 L12: -0.7829 REMARK 3 L13: 0.2178 L23: -0.2060 REMARK 3 S TENSOR REMARK 3 S11: 0.0650 S12: -0.0384 S13: -0.3633 REMARK 3 S21: -0.3713 S22: 0.0071 S23: 0.2196 REMARK 3 S31: 0.1006 S32: -0.3145 S33: 0.0004 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN B AND RESID 1:155 REMARK 3 ORIGIN FOR THE GROUP (A): 31.3075 23.1959 104.5295 REMARK 3 T TENSOR REMARK 3 T11: 0.7845 T22: 1.1097 REMARK 3 T33: 0.1630 T12: 0.2040 REMARK 3 T13: 0.0363 T23: -0.1703 REMARK 3 L TENSOR REMARK 3 L11: 0.9645 L22: 1.1070 REMARK 3 L33: 0.8386 L12: 0.4958 REMARK 3 L13: 0.4193 L23: -0.8405 REMARK 3 S TENSOR REMARK 3 S11: -0.1268 S12: -0.9908 S13: 0.0018 REMARK 3 S21: 0.6656 S22: -0.1063 S23: 0.0684 REMARK 3 S31: -0.4351 S32: -0.8617 S33: -0.5569 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN B AND RESID 156:330 REMARK 3 ORIGIN FOR THE GROUP (A): 28.8109 13.6478 78.2788 REMARK 3 T TENSOR REMARK 3 T11: 0.3403 T22: 0.4399 REMARK 3 T33: 0.3266 T12: 0.0480 REMARK 3 T13: 0.0663 T23: 0.0761 REMARK 3 L TENSOR REMARK 3 L11: 0.8019 L22: 0.4646 REMARK 3 L33: 1.6391 L12: 0.4364 REMARK 3 L13: 1.3574 L23: 0.2757 REMARK 3 S TENSOR REMARK 3 S11: 0.0396 S12: -0.5242 S13: -0.0343 REMARK 3 S21: 0.1809 S22: -0.0200 S23: -0.1058 REMARK 3 S31: 0.0735 S32: -0.3419 S33: 0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN B AND RESID 345:435 REMARK 3 ORIGIN FOR THE GROUP (A): 36.3599 25.9518 85.2736 REMARK 3 T TENSOR REMARK 3 T11: 0.3990 T22: 0.4763 REMARK 3 T33: 0.2123 T12: 0.1523 REMARK 3 T13: -0.0084 T23: -0.1184 REMARK 3 L TENSOR REMARK 3 L11: 0.8929 L22: 0.5398 REMARK 3 L33: 1.8182 L12: 0.5780 REMARK 3 L13: 0.3455 L23: -0.2129 REMARK 3 S TENSOR REMARK 3 S11: -0.1243 S12: -0.5763 S13: 0.0845 REMARK 3 S21: 0.1925 S22: -0.1257 S23: 0.0911 REMARK 3 S31: -0.3030 S32: -0.1905 S33: -0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3BTV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JAN-08. REMARK 100 THE DEPOSITION ID IS D_1000045950. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56922 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.600 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 31.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 7.80 REMARK 200 R MERGE FOR SHELL (I) : 0.76700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.060 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3BTU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.15M SODIUM FLUORIDE, REMARK 280 PH 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 43.54350 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.97350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.54350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 51.97350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 TYR A 3 REMARK 465 ASN A 4 REMARK 465 LYS A 5 REMARK 465 ARG A 6 REMARK 465 SER A 7 REMARK 465 SER A 8 REMARK 465 VAL A 9 REMARK 465 SER A 10 REMARK 465 THR A 11 REMARK 465 VAL A 12 REMARK 465 PRO A 13 REMARK 465 ASN A 14 REMARK 465 ALA A 15 REMARK 465 LYS A 286 REMARK 465 LYS A 287 REMARK 465 PHE A 288 REMARK 465 ALA A 309 REMARK 465 GLY A 310 REMARK 465 PHE A 311 REMARK 465 ALA A 312 REMARK 465 GLU A 313 REMARK 465 THR A 324 REMARK 465 ARG A 325 REMARK 465 ALA A 326 REMARK 465 ASN A 327 REMARK 465 ASP A 328 REMARK 465 PHE A 329 REMARK 465 PRO A 330 REMARK 465 LEU A 331 REMARK 465 ALA A 332 REMARK 465 ASN A 333 REMARK 465 GLY A 334 REMARK 465 GLN A 335 REMARK 465 GLN A 336 REMARK 465 ALA A 337 REMARK 465 PRO A 338 REMARK 465 LEU A 339 REMARK 465 ASP A 340 REMARK 465 PRO A 341 REMARK 465 GLY A 342 REMARK 465 TYR A 343 REMARK 465 ASP A 344 REMARK 465 ALA A 345 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 ASP B 2 REMARK 465 TYR B 3 REMARK 465 ASN B 4 REMARK 465 LYS B 5 REMARK 465 ARG B 6 REMARK 465 SER B 7 REMARK 465 SER B 8 REMARK 465 VAL B 9 REMARK 465 SER B 10 REMARK 465 THR B 11 REMARK 465 VAL B 12 REMARK 465 PRO B 13 REMARK 465 ASN B 14 REMARK 465 ALA B 15 REMARK 465 LYS B 283 REMARK 465 PRO B 284 REMARK 465 THR B 285 REMARK 465 ALA B 309 REMARK 465 GLY B 310 REMARK 465 PHE B 311 REMARK 465 ALA B 312 REMARK 465 GLY B 323 REMARK 465 THR B 324 REMARK 465 ARG B 325 REMARK 465 ALA B 326 REMARK 465 ASN B 327 REMARK 465 ASP B 328 REMARK 465 PHE B 329 REMARK 465 PRO B 330 REMARK 465 LEU B 331 REMARK 465 ALA B 332 REMARK 465 ASN B 333 REMARK 465 GLY B 334 REMARK 465 GLN B 335 REMARK 465 GLN B 336 REMARK 465 ALA B 337 REMARK 465 PRO B 338 REMARK 465 LEU B 339 REMARK 465 ASP B 340 REMARK 465 PRO B 341 REMARK 465 SER B 434 REMARK 465 LEU B 435 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 308 N - CA - C ANGL. DEV. = -18.4 DEGREES REMARK 500 GLY A 346 N - CA - C ANGL. DEV. = -19.5 DEGREES REMARK 500 GLY B 282 C - N - CA ANGL. DEV. = 16.0 DEGREES REMARK 500 GLY B 282 N - CA - C ANGL. DEV. = -16.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 35 -64.99 -126.37 REMARK 500 LEU A 43 44.16 -101.31 REMARK 500 THR A 209 -65.24 -96.03 REMARK 500 ASN A 235 71.46 -119.50 REMARK 500 TYR A 321 -167.59 -161.96 REMARK 500 ASN A 378 63.65 33.81 REMARK 500 ASN A 378 63.69 33.57 REMARK 500 LEU A 385 120.47 -38.45 REMARK 500 THR B 35 -65.32 -125.18 REMARK 500 LEU B 43 43.40 -101.12 REMARK 500 THR B 209 -65.63 -96.40 REMARK 500 ASN B 235 72.03 -119.15 REMARK 500 PHE B 288 64.89 -114.15 REMARK 500 TYR B 343 -166.27 -78.03 REMARK 500 LYS B 381 27.42 49.68 REMARK 500 SER B 431 59.62 -101.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 281 GLY A 282 -149.61 REMARK 500 GLY A 346 LYS A 347 -145.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3BTS RELATED DB: PDB REMARK 900 S.CEREVISIAE COMPLEX WITH NAD REMARK 900 RELATED ID: 3BTU RELATED DB: PDB REMARK 900 S.CEREVISIAE WITH E351K MUTATION DBREF 3BTV A 1 435 UNP P04387 GAL80_YEAST 1 435 DBREF 3BTV B 1 435 UNP P04387 GAL80_YEAST 1 435 SEQADV 3BTV GLY A -2 UNP P04387 EXPRESSION TAG SEQADV 3BTV SER A -1 UNP P04387 EXPRESSION TAG SEQADV 3BTV HIS A 0 UNP P04387 EXPRESSION TAG SEQADV 3BTV ARG A 301 UNP P04387 GLY 301 ENGINEERED MUTATION SEQADV 3BTV GLY B -2 UNP P04387 EXPRESSION TAG SEQADV 3BTV SER B -1 UNP P04387 EXPRESSION TAG SEQADV 3BTV HIS B 0 UNP P04387 EXPRESSION TAG SEQADV 3BTV ARG B 301 UNP P04387 GLY 301 ENGINEERED MUTATION SEQRES 1 A 438 GLY SER HIS MET ASP TYR ASN LYS ARG SER SER VAL SER SEQRES 2 A 438 THR VAL PRO ASN ALA ALA PRO ILE ARG VAL GLY PHE VAL SEQRES 3 A 438 GLY LEU ASN ALA ALA LYS GLY TRP ALA ILE LYS THR HIS SEQRES 4 A 438 TYR PRO ALA ILE LEU GLN LEU SER SER GLN PHE GLN ILE SEQRES 5 A 438 THR ALA LEU TYR SER PRO LYS ILE GLU THR SER ILE ALA SEQRES 6 A 438 THR ILE GLN ARG LEU LYS LEU SER ASN ALA THR ALA PHE SEQRES 7 A 438 PRO THR LEU GLU SER PHE ALA SER SER SER THR ILE ASP SEQRES 8 A 438 MET ILE VAL ILE ALA ILE GLN VAL ALA SER HIS TYR GLU SEQRES 9 A 438 VAL VAL MET PRO LEU LEU GLU PHE SER LYS ASN ASN PRO SEQRES 10 A 438 ASN LEU LYS TYR LEU PHE VAL GLU TRP ALA LEU ALA CYS SEQRES 11 A 438 SER LEU ASP GLN ALA GLU SER ILE TYR LYS ALA ALA ALA SEQRES 12 A 438 GLU ARG GLY VAL GLN THR ILE ILE SER LEU GLN GLY ARG SEQRES 13 A 438 LYS SER PRO TYR ILE LEU ARG ALA LYS GLU LEU ILE SER SEQRES 14 A 438 GLN GLY TYR ILE GLY ASP ILE ASN SER ILE GLU ILE ALA SEQRES 15 A 438 GLY ASN GLY GLY TRP TYR GLY TYR GLU ARG PRO VAL LYS SEQRES 16 A 438 SER PRO LYS TYR ILE TYR GLU ILE GLY ASN GLY VAL ASP SEQRES 17 A 438 LEU VAL THR THR THR PHE GLY HIS THR ILE ASP ILE LEU SEQRES 18 A 438 GLN TYR MET THR SER SER TYR PHE SER ARG ILE ASN ALA SEQRES 19 A 438 MET VAL PHE ASN ASN ILE PRO GLU GLN GLU LEU ILE ASP SEQRES 20 A 438 GLU ARG GLY ASN ARG LEU GLY GLN ARG VAL PRO LYS THR SEQRES 21 A 438 VAL PRO ASP HIS LEU LEU PHE GLN GLY THR LEU LEU ASN SEQRES 22 A 438 GLY ASN VAL PRO VAL SER CYS SER PHE LYS GLY GLY LYS SEQRES 23 A 438 PRO THR LYS LYS PHE THR LYS ASN LEU VAL ILE ASP ILE SEQRES 24 A 438 HIS GLY THR LYS ARG ASP LEU LYS LEU GLU GLY ASP ALA SEQRES 25 A 438 GLY PHE ALA GLU ILE SER ASN LEU VAL LEU TYR TYR SER SEQRES 26 A 438 GLY THR ARG ALA ASN ASP PHE PRO LEU ALA ASN GLY GLN SEQRES 27 A 438 GLN ALA PRO LEU ASP PRO GLY TYR ASP ALA GLY LYS GLU SEQRES 28 A 438 ILE MET GLU VAL TYR HIS LEU ARG ASN TYR ASN ALA ILE SEQRES 29 A 438 VAL GLY ASN ILE HIS ARG LEU TYR GLN SER ILE SER ASP SEQRES 30 A 438 PHE HIS PHE ASN THR LYS LYS ILE PRO GLU LEU PRO SER SEQRES 31 A 438 GLN PHE VAL MET GLN GLY PHE ASP PHE GLU GLY PHE PRO SEQRES 32 A 438 THR LEU MET ASP ALA LEU ILE LEU HIS ARG LEU ILE GLU SEQRES 33 A 438 SER VAL TYR LYS SER ASN MET MET GLY SER THR LEU ASN SEQRES 34 A 438 VAL SER ASN ILE SER HIS TYR SER LEU SEQRES 1 B 438 GLY SER HIS MET ASP TYR ASN LYS ARG SER SER VAL SER SEQRES 2 B 438 THR VAL PRO ASN ALA ALA PRO ILE ARG VAL GLY PHE VAL SEQRES 3 B 438 GLY LEU ASN ALA ALA LYS GLY TRP ALA ILE LYS THR HIS SEQRES 4 B 438 TYR PRO ALA ILE LEU GLN LEU SER SER GLN PHE GLN ILE SEQRES 5 B 438 THR ALA LEU TYR SER PRO LYS ILE GLU THR SER ILE ALA SEQRES 6 B 438 THR ILE GLN ARG LEU LYS LEU SER ASN ALA THR ALA PHE SEQRES 7 B 438 PRO THR LEU GLU SER PHE ALA SER SER SER THR ILE ASP SEQRES 8 B 438 MET ILE VAL ILE ALA ILE GLN VAL ALA SER HIS TYR GLU SEQRES 9 B 438 VAL VAL MET PRO LEU LEU GLU PHE SER LYS ASN ASN PRO SEQRES 10 B 438 ASN LEU LYS TYR LEU PHE VAL GLU TRP ALA LEU ALA CYS SEQRES 11 B 438 SER LEU ASP GLN ALA GLU SER ILE TYR LYS ALA ALA ALA SEQRES 12 B 438 GLU ARG GLY VAL GLN THR ILE ILE SER LEU GLN GLY ARG SEQRES 13 B 438 LYS SER PRO TYR ILE LEU ARG ALA LYS GLU LEU ILE SER SEQRES 14 B 438 GLN GLY TYR ILE GLY ASP ILE ASN SER ILE GLU ILE ALA SEQRES 15 B 438 GLY ASN GLY GLY TRP TYR GLY TYR GLU ARG PRO VAL LYS SEQRES 16 B 438 SER PRO LYS TYR ILE TYR GLU ILE GLY ASN GLY VAL ASP SEQRES 17 B 438 LEU VAL THR THR THR PHE GLY HIS THR ILE ASP ILE LEU SEQRES 18 B 438 GLN TYR MET THR SER SER TYR PHE SER ARG ILE ASN ALA SEQRES 19 B 438 MET VAL PHE ASN ASN ILE PRO GLU GLN GLU LEU ILE ASP SEQRES 20 B 438 GLU ARG GLY ASN ARG LEU GLY GLN ARG VAL PRO LYS THR SEQRES 21 B 438 VAL PRO ASP HIS LEU LEU PHE GLN GLY THR LEU LEU ASN SEQRES 22 B 438 GLY ASN VAL PRO VAL SER CYS SER PHE LYS GLY GLY LYS SEQRES 23 B 438 PRO THR LYS LYS PHE THR LYS ASN LEU VAL ILE ASP ILE SEQRES 24 B 438 HIS GLY THR LYS ARG ASP LEU LYS LEU GLU GLY ASP ALA SEQRES 25 B 438 GLY PHE ALA GLU ILE SER ASN LEU VAL LEU TYR TYR SER SEQRES 26 B 438 GLY THR ARG ALA ASN ASP PHE PRO LEU ALA ASN GLY GLN SEQRES 27 B 438 GLN ALA PRO LEU ASP PRO GLY TYR ASP ALA GLY LYS GLU SEQRES 28 B 438 ILE MET GLU VAL TYR HIS LEU ARG ASN TYR ASN ALA ILE SEQRES 29 B 438 VAL GLY ASN ILE HIS ARG LEU TYR GLN SER ILE SER ASP SEQRES 30 B 438 PHE HIS PHE ASN THR LYS LYS ILE PRO GLU LEU PRO SER SEQRES 31 B 438 GLN PHE VAL MET GLN GLY PHE ASP PHE GLU GLY PHE PRO SEQRES 32 B 438 THR LEU MET ASP ALA LEU ILE LEU HIS ARG LEU ILE GLU SEQRES 33 B 438 SER VAL TYR LYS SER ASN MET MET GLY SER THR LEU ASN SEQRES 34 B 438 VAL SER ASN ILE SER HIS TYR SER LEU FORMUL 3 HOH *167(H2 O) HELIX 1 1 THR A 35 LEU A 43 1 9 HELIX 2 2 LYS A 56 LEU A 67 1 12 HELIX 3 3 THR A 77 SER A 84 1 8 HELIX 4 4 GLN A 95 ALA A 97 5 3 HELIX 5 5 SER A 98 SER A 110 1 13 HELIX 6 6 LYS A 111 ASN A 113 5 3 HELIX 7 7 SER A 128 GLU A 141 1 14 HELIX 8 8 LEU A 150 LYS A 154 5 5 HELIX 9 9 SER A 155 GLN A 167 1 13 HELIX 10 10 PRO A 194 GLU A 199 5 6 HELIX 11 11 THR A 209 SER A 223 1 15 HELIX 12 12 ASN A 359 PHE A 377 1 19 HELIX 13 13 THR A 401 GLY A 422 1 22 HELIX 14 14 THR B 35 LEU B 43 1 9 HELIX 15 15 LYS B 56 LEU B 67 1 12 HELIX 16 16 THR B 77 SER B 84 1 8 HELIX 17 17 GLN B 95 ALA B 97 5 3 HELIX 18 18 SER B 98 SER B 110 1 13 HELIX 19 19 LYS B 111 ASN B 113 5 3 HELIX 20 20 SER B 128 GLU B 141 1 14 HELIX 21 21 LEU B 150 LYS B 154 5 5 HELIX 22 22 SER B 155 GLN B 167 1 13 HELIX 23 23 PRO B 194 GLU B 199 5 6 HELIX 24 24 THR B 209 SER B 223 1 15 HELIX 25 25 ASN B 359 ASN B 378 1 20 HELIX 26 26 THR B 401 GLY B 422 1 22 SHEET 1 A 6 THR A 73 ALA A 74 0 SHEET 2 A 6 PHE A 47 TYR A 53 1 N THR A 50 O THR A 73 SHEET 3 A 6 ILE A 18 VAL A 23 1 N VAL A 20 O GLN A 48 SHEET 4 A 6 MET A 89 ILE A 92 1 O VAL A 91 N GLY A 21 SHEET 5 A 6 TYR A 118 GLU A 122 1 O PHE A 120 N ILE A 90 SHEET 6 A 6 GLN A 145 SER A 149 1 O ILE A 147 N LEU A 119 SHEET 1 B 9 GLU A 348 TYR A 353 0 SHEET 2 B 9 ASN A 316 SER A 322 -1 N LEU A 317 O TYR A 353 SHEET 3 B 9 ASP A 302 GLU A 306 -1 N LYS A 304 O VAL A 318 SHEET 4 B 9 LEU A 292 GLY A 298 -1 N ILE A 296 O LEU A 303 SHEET 5 B 9 ILE A 173 ASN A 181 -1 N GLU A 177 O ASP A 295 SHEET 6 B 9 VAL A 273 LYS A 280 1 O SER A 276 N ILE A 178 SHEET 7 B 9 HIS A 261 LEU A 268 -1 N PHE A 264 O CYS A 277 SHEET 8 B 9 PHE A 226 PHE A 234 -1 N SER A 227 O THR A 267 SHEET 9 B 9 LEU A 425 ASN A 426 -1 O LEU A 425 N ILE A 229 SHEET 1 C 3 GLU A 188 PRO A 190 0 SHEET 2 C 3 GLU A 239 ILE A 243 1 O GLU A 241 N ARG A 189 SHEET 3 C 3 ARG A 249 PRO A 255 -1 O VAL A 254 N GLN A 240 SHEET 1 D 6 THR B 73 ALA B 74 0 SHEET 2 D 6 PHE B 47 TYR B 53 1 N THR B 50 O THR B 73 SHEET 3 D 6 ILE B 18 VAL B 23 1 N VAL B 20 O GLN B 48 SHEET 4 D 6 MET B 89 ILE B 92 1 O MET B 89 N ARG B 19 SHEET 5 D 6 TYR B 118 GLU B 122 1 O PHE B 120 N ILE B 90 SHEET 6 D 6 GLN B 145 SER B 149 1 O ILE B 147 N LEU B 119 SHEET 1 E 9 ILE B 349 TYR B 353 0 SHEET 2 E 9 ASN B 316 TYR B 321 -1 N LEU B 317 O TYR B 353 SHEET 3 E 9 ASP B 302 GLY B 307 -1 N LYS B 304 O VAL B 318 SHEET 4 E 9 LEU B 292 GLY B 298 -1 N ILE B 296 O LEU B 303 SHEET 5 E 9 ILE B 173 ASN B 181 -1 N GLU B 177 O ASP B 295 SHEET 6 E 9 VAL B 273 LYS B 280 1 O SER B 276 N ILE B 178 SHEET 7 E 9 HIS B 261 LEU B 268 -1 N PHE B 264 O CYS B 277 SHEET 8 E 9 PHE B 226 PHE B 234 -1 N SER B 227 O THR B 267 SHEET 9 E 9 LEU B 425 ASN B 426 -1 O LEU B 425 N ILE B 229 SHEET 1 F 3 GLU B 188 PRO B 190 0 SHEET 2 F 3 GLU B 239 ILE B 243 1 O GLU B 241 N ARG B 189 SHEET 3 F 3 ARG B 249 PRO B 255 -1 O VAL B 254 N GLN B 240 CISPEP 1 TRP A 123 ALA A 124 0 5.13 CISPEP 2 ARG A 356 ASN A 357 0 -0.35 CISPEP 3 SER A 434 LEU A 435 0 -3.32 CISPEP 4 TRP B 123 ALA B 124 0 4.13 CISPEP 5 GLY B 281 GLY B 282 0 8.66 CISPEP 6 PRO B 383 GLU B 384 0 -5.37 CRYST1 87.087 103.947 106.179 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011483 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009620 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009418 0.00000