data_3BTZ # _entry.id 3BTZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3BTZ pdb_00003btz 10.2210/pdb3btz/pdb NDB PD1130 ? ? RCSB RCSB045953 ? ? WWPDB D_1000045953 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-04-22 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2014-05-21 4 'Structure model' 1 3 2021-10-20 5 'Structure model' 1 4 2024-11-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' Other 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_conn 3 4 'Structure model' struct_ref_seq_dif 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' pdbx_entry_details 7 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_dist_value' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 6 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 7 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 8 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 9 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 10 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 11 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 12 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 13 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 14 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 15 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 16 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 17 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3BTZ _pdbx_database_status.recvd_initial_deposition_date 2007-12-31 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2FD8 'E. coli homolog' unspecified PDB 2IUW 'Human homolog' unspecified PDB 3BTX . unspecified PDB 3BTY . unspecified PDB 3BU0 . unspecified PDB 3BUC . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Yang, C.-G.' 1 'Yi, C.' 2 'He, C.' 3 # _citation.id primary _citation.title 'Crystal structures of DNA/RNA repair enzymes AlkB and ABH2 bound to dsDNA.' _citation.journal_abbrev Nature _citation.journal_volume 452 _citation.page_first 961 _citation.page_last 965 _citation.year 2008 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18432238 _citation.pdbx_database_id_DOI 10.1038/nature06889 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yang, C.G.' 1 ? primary 'Yi, C.' 2 ? primary 'Duguid, E.M.' 3 ? primary 'Sullivan, C.T.' 4 ? primary 'Jian, X.' 5 ? primary 'Rice, P.A.' 6 ? primary 'He, C.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2' 22977.275 1 1.14.11.- 'C67S, C165S, C192S, E175C' ? ? 2 polymer syn ;DNA (5'-D(*AP*GP*GP*TP*GP*AP*(2YR)P*AP*AP*TP*GP*CP*G)-3') ; 4100.766 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*DTP*DCP*DGP*DCP*DAP*DTP*DTP*DAP*DTP*DCP*DAP*DCP*DC)-3') ; 3886.549 1 ? ? ? ? 4 water nat water 18.015 4 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Alkylated DNA repair protein alkB homolog 2, Oxy DC1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;WRHIRAEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIP VLERIRDHVSGVTGQTFNFVLINRYKDGSDHIGEHRDDCRELAPGSPIASVSFGASRDFVFRHKDSRGKSPSRRVAVVRL PLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKILL ; ;WRHIRAEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIP VLERIRDHVSGVTGQTFNFVLINRYKDGSDHIGEHRDDCRELAPGSPIASVSFGASRDFVFRHKDSRGKSPSRRVAVVRL PLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKILL ; A ? 2 polydeoxyribonucleotide no yes '(DA)(DG)(DG)(DT)(DG)(DA)(2YR)(DA)(DA)(DT)(DG)(DC)(DG)' AGGTGAXAATGCG B ? 3 polydeoxyribonucleotide no no '(DT)(DC)(DG)(DC)(DA)(DT)(DT)(DA)(DT)(DC)(DA)(DC)(DC)' TCGCATTATCACC C ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 TRP n 1 2 ARG n 1 3 HIS n 1 4 ILE n 1 5 ARG n 1 6 ALA n 1 7 GLU n 1 8 GLY n 1 9 LEU n 1 10 ASP n 1 11 SER n 1 12 SER n 1 13 TYR n 1 14 THR n 1 15 VAL n 1 16 LEU n 1 17 PHE n 1 18 GLY n 1 19 LYS n 1 20 ALA n 1 21 GLU n 1 22 ALA n 1 23 ASP n 1 24 GLU n 1 25 ILE n 1 26 PHE n 1 27 GLN n 1 28 GLU n 1 29 LEU n 1 30 GLU n 1 31 LYS n 1 32 GLU n 1 33 VAL n 1 34 GLU n 1 35 TYR n 1 36 PHE n 1 37 THR n 1 38 GLY n 1 39 ALA n 1 40 LEU n 1 41 ALA n 1 42 ARG n 1 43 VAL n 1 44 GLN n 1 45 VAL n 1 46 PHE n 1 47 GLY n 1 48 LYS n 1 49 TRP n 1 50 HIS n 1 51 SER n 1 52 VAL n 1 53 PRO n 1 54 ARG n 1 55 LYS n 1 56 GLN n 1 57 ALA n 1 58 THR n 1 59 TYR n 1 60 GLY n 1 61 ASP n 1 62 ALA n 1 63 GLY n 1 64 LEU n 1 65 THR n 1 66 TYR n 1 67 THR n 1 68 PHE n 1 69 SER n 1 70 GLY n 1 71 LEU n 1 72 THR n 1 73 LEU n 1 74 SER n 1 75 PRO n 1 76 LYS n 1 77 PRO n 1 78 TRP n 1 79 ILE n 1 80 PRO n 1 81 VAL n 1 82 LEU n 1 83 GLU n 1 84 ARG n 1 85 ILE n 1 86 ARG n 1 87 ASP n 1 88 HIS n 1 89 VAL n 1 90 SER n 1 91 GLY n 1 92 VAL n 1 93 THR n 1 94 GLY n 1 95 GLN n 1 96 THR n 1 97 PHE n 1 98 ASN n 1 99 PHE n 1 100 VAL n 1 101 LEU n 1 102 ILE n 1 103 ASN n 1 104 ARG n 1 105 TYR n 1 106 LYS n 1 107 ASP n 1 108 GLY n 1 109 SER n 1 110 ASP n 1 111 HIS n 1 112 ILE n 1 113 GLY n 1 114 GLU n 1 115 HIS n 1 116 ARG n 1 117 ASP n 1 118 ASP n 1 119 CYS n 1 120 ARG n 1 121 GLU n 1 122 LEU n 1 123 ALA n 1 124 PRO n 1 125 GLY n 1 126 SER n 1 127 PRO n 1 128 ILE n 1 129 ALA n 1 130 SER n 1 131 VAL n 1 132 SER n 1 133 PHE n 1 134 GLY n 1 135 ALA n 1 136 SER n 1 137 ARG n 1 138 ASP n 1 139 PHE n 1 140 VAL n 1 141 PHE n 1 142 ARG n 1 143 HIS n 1 144 LYS n 1 145 ASP n 1 146 SER n 1 147 ARG n 1 148 GLY n 1 149 LYS n 1 150 SER n 1 151 PRO n 1 152 SER n 1 153 ARG n 1 154 ARG n 1 155 VAL n 1 156 ALA n 1 157 VAL n 1 158 VAL n 1 159 ARG n 1 160 LEU n 1 161 PRO n 1 162 LEU n 1 163 ALA n 1 164 HIS n 1 165 GLY n 1 166 SER n 1 167 LEU n 1 168 LEU n 1 169 MET n 1 170 MET n 1 171 ASN n 1 172 HIS n 1 173 PRO n 1 174 THR n 1 175 ASN n 1 176 THR n 1 177 HIS n 1 178 TRP n 1 179 TYR n 1 180 HIS n 1 181 SER n 1 182 LEU n 1 183 PRO n 1 184 VAL n 1 185 ARG n 1 186 LYS n 1 187 LYS n 1 188 VAL n 1 189 LEU n 1 190 ALA n 1 191 PRO n 1 192 ARG n 1 193 VAL n 1 194 ASN n 1 195 LEU n 1 196 THR n 1 197 PHE n 1 198 ARG n 1 199 LYS n 1 200 ILE n 1 201 LEU n 1 202 LEU n 2 1 DA n 2 2 DG n 2 3 DG n 2 4 DT n 2 5 DG n 2 6 DA n 2 7 2YR n 2 8 DA n 2 9 DA n 2 10 DT n 2 11 DG n 2 12 DC n 2 13 DG n 3 1 DT n 3 2 DC n 3 3 DG n 3 4 DC n 3 5 DA n 3 6 DT n 3 7 DT n 3 8 DA n 3 9 DT n 3 10 DC n 3 11 DA n 3 12 DC n 3 13 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'ALKBH2, ABH2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 12q24.11 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2YR non-polymer . ;2'-deoxy-N-(2-sulfanylethyl)cytidine 5'-(dihydrogen phosphate) ; ? 'C11 H18 N3 O7 P S' 367.315 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 TRP 1 57 57 TRP TRP A . n A 1 2 ARG 2 58 58 ARG ARG A . n A 1 3 HIS 3 59 59 HIS HIS A . n A 1 4 ILE 4 60 60 ILE ILE A . n A 1 5 ARG 5 61 61 ARG ARG A . n A 1 6 ALA 6 62 62 ALA ALA A . n A 1 7 GLU 7 63 63 GLU GLU A . n A 1 8 GLY 8 64 64 GLY GLY A . n A 1 9 LEU 9 65 65 LEU LEU A . n A 1 10 ASP 10 66 66 ASP ASP A . n A 1 11 SER 11 67 67 SER SER A . n A 1 12 SER 12 68 68 SER SER A . n A 1 13 TYR 13 69 69 TYR TYR A . n A 1 14 THR 14 70 70 THR THR A . n A 1 15 VAL 15 71 71 VAL VAL A . n A 1 16 LEU 16 72 72 LEU LEU A . n A 1 17 PHE 17 73 73 PHE PHE A . n A 1 18 GLY 18 74 74 GLY GLY A . n A 1 19 LYS 19 75 75 LYS LYS A . n A 1 20 ALA 20 76 76 ALA ALA A . n A 1 21 GLU 21 77 77 GLU GLU A . n A 1 22 ALA 22 78 78 ALA ALA A . n A 1 23 ASP 23 79 79 ASP ASP A . n A 1 24 GLU 24 80 80 GLU GLU A . n A 1 25 ILE 25 81 81 ILE ILE A . n A 1 26 PHE 26 82 82 PHE PHE A . n A 1 27 GLN 27 83 83 GLN GLN A . n A 1 28 GLU 28 84 84 GLU GLU A . n A 1 29 LEU 29 85 85 LEU LEU A . n A 1 30 GLU 30 86 86 GLU GLU A . n A 1 31 LYS 31 87 87 LYS LYS A . n A 1 32 GLU 32 88 88 GLU GLU A . n A 1 33 VAL 33 89 89 VAL VAL A . n A 1 34 GLU 34 90 90 GLU GLU A . n A 1 35 TYR 35 91 91 TYR TYR A . n A 1 36 PHE 36 92 92 PHE PHE A . n A 1 37 THR 37 93 93 THR THR A . n A 1 38 GLY 38 94 94 GLY GLY A . n A 1 39 ALA 39 95 95 ALA ALA A . n A 1 40 LEU 40 96 96 LEU LEU A . n A 1 41 ALA 41 97 97 ALA ALA A . n A 1 42 ARG 42 98 98 ARG ARG A . n A 1 43 VAL 43 99 99 VAL VAL A . n A 1 44 GLN 44 100 100 GLN GLN A . n A 1 45 VAL 45 101 101 VAL VAL A . n A 1 46 PHE 46 102 102 PHE PHE A . n A 1 47 GLY 47 103 103 GLY GLY A . n A 1 48 LYS 48 104 104 LYS LYS A . n A 1 49 TRP 49 105 105 TRP TRP A . n A 1 50 HIS 50 106 106 HIS HIS A . n A 1 51 SER 51 107 107 SER SER A . n A 1 52 VAL 52 108 108 VAL VAL A . n A 1 53 PRO 53 109 109 PRO PRO A . n A 1 54 ARG 54 110 110 ARG ARG A . n A 1 55 LYS 55 111 111 LYS LYS A . n A 1 56 GLN 56 112 112 GLN GLN A . n A 1 57 ALA 57 113 113 ALA ALA A . n A 1 58 THR 58 114 114 THR THR A . n A 1 59 TYR 59 115 115 TYR TYR A . n A 1 60 GLY 60 116 116 GLY GLY A . n A 1 61 ASP 61 117 117 ASP ASP A . n A 1 62 ALA 62 118 118 ALA ALA A . n A 1 63 GLY 63 119 119 GLY GLY A . n A 1 64 LEU 64 120 120 LEU LEU A . n A 1 65 THR 65 121 121 THR THR A . n A 1 66 TYR 66 122 122 TYR TYR A . n A 1 67 THR 67 123 123 THR THR A . n A 1 68 PHE 68 124 124 PHE PHE A . n A 1 69 SER 69 125 125 SER SER A . n A 1 70 GLY 70 126 126 GLY GLY A . n A 1 71 LEU 71 127 127 LEU LEU A . n A 1 72 THR 72 128 128 THR THR A . n A 1 73 LEU 73 129 129 LEU LEU A . n A 1 74 SER 74 130 130 SER SER A . n A 1 75 PRO 75 131 131 PRO PRO A . n A 1 76 LYS 76 132 132 LYS LYS A . n A 1 77 PRO 77 133 133 PRO PRO A . n A 1 78 TRP 78 134 134 TRP TRP A . n A 1 79 ILE 79 135 135 ILE ILE A . n A 1 80 PRO 80 136 136 PRO PRO A . n A 1 81 VAL 81 137 137 VAL VAL A . n A 1 82 LEU 82 138 138 LEU LEU A . n A 1 83 GLU 83 139 139 GLU GLU A . n A 1 84 ARG 84 140 140 ARG ARG A . n A 1 85 ILE 85 141 141 ILE ILE A . n A 1 86 ARG 86 142 142 ARG ARG A . n A 1 87 ASP 87 143 143 ASP ASP A . n A 1 88 HIS 88 144 144 HIS HIS A . n A 1 89 VAL 89 145 145 VAL VAL A . n A 1 90 SER 90 146 146 SER SER A . n A 1 91 GLY 91 147 147 GLY GLY A . n A 1 92 VAL 92 148 148 VAL VAL A . n A 1 93 THR 93 149 149 THR THR A . n A 1 94 GLY 94 150 150 GLY GLY A . n A 1 95 GLN 95 151 151 GLN GLN A . n A 1 96 THR 96 152 152 THR THR A . n A 1 97 PHE 97 153 153 PHE PHE A . n A 1 98 ASN 98 154 154 ASN ASN A . n A 1 99 PHE 99 155 155 PHE PHE A . n A 1 100 VAL 100 156 156 VAL VAL A . n A 1 101 LEU 101 157 157 LEU LEU A . n A 1 102 ILE 102 158 158 ILE ILE A . n A 1 103 ASN 103 159 159 ASN ASN A . n A 1 104 ARG 104 160 160 ARG ARG A . n A 1 105 TYR 105 161 161 TYR TYR A . n A 1 106 LYS 106 162 162 LYS LYS A . n A 1 107 ASP 107 163 163 ASP ASP A . n A 1 108 GLY 108 164 164 GLY GLY A . n A 1 109 SER 109 165 165 SER SER A . n A 1 110 ASP 110 166 166 ASP ASP A . n A 1 111 HIS 111 167 167 HIS HIS A . n A 1 112 ILE 112 168 168 ILE ILE A . n A 1 113 GLY 113 169 169 GLY GLY A . n A 1 114 GLU 114 170 170 GLU GLU A . n A 1 115 HIS 115 171 171 HIS HIS A . n A 1 116 ARG 116 172 172 ARG ARG A . n A 1 117 ASP 117 173 173 ASP ASP A . n A 1 118 ASP 118 174 174 ASP ASP A . n A 1 119 CYS 119 175 175 CYS CYS A . n A 1 120 ARG 120 176 176 ARG ARG A . n A 1 121 GLU 121 177 177 GLU GLU A . n A 1 122 LEU 122 178 178 LEU LEU A . n A 1 123 ALA 123 179 179 ALA ALA A . n A 1 124 PRO 124 180 180 PRO PRO A . n A 1 125 GLY 125 181 181 GLY GLY A . n A 1 126 SER 126 182 182 SER SER A . n A 1 127 PRO 127 183 183 PRO PRO A . n A 1 128 ILE 128 184 184 ILE ILE A . n A 1 129 ALA 129 185 185 ALA ALA A . n A 1 130 SER 130 186 186 SER SER A . n A 1 131 VAL 131 187 187 VAL VAL A . n A 1 132 SER 132 188 188 SER SER A . n A 1 133 PHE 133 189 189 PHE PHE A . n A 1 134 GLY 134 190 190 GLY GLY A . n A 1 135 ALA 135 191 191 ALA ALA A . n A 1 136 SER 136 192 192 SER SER A . n A 1 137 ARG 137 193 193 ARG ARG A . n A 1 138 ASP 138 194 194 ASP ASP A . n A 1 139 PHE 139 195 195 PHE PHE A . n A 1 140 VAL 140 196 196 VAL VAL A . n A 1 141 PHE 141 197 197 PHE PHE A . n A 1 142 ARG 142 198 198 ARG ARG A . n A 1 143 HIS 143 199 199 HIS HIS A . n A 1 144 LYS 144 200 200 LYS LYS A . n A 1 145 ASP 145 201 201 ASP ASP A . n A 1 146 SER 146 202 202 SER SER A . n A 1 147 ARG 147 203 203 ARG ARG A . n A 1 148 GLY 148 204 204 GLY GLY A . n A 1 149 LYS 149 205 205 LYS LYS A . n A 1 150 SER 150 206 206 SER SER A . n A 1 151 PRO 151 207 207 PRO PRO A . n A 1 152 SER 152 208 208 SER SER A . n A 1 153 ARG 153 209 209 ARG ARG A . n A 1 154 ARG 154 210 210 ARG ARG A . n A 1 155 VAL 155 211 211 VAL VAL A . n A 1 156 ALA 156 212 212 ALA ALA A . n A 1 157 VAL 157 213 213 VAL VAL A . n A 1 158 VAL 158 214 214 VAL VAL A . n A 1 159 ARG 159 215 215 ARG ARG A . n A 1 160 LEU 160 216 216 LEU LEU A . n A 1 161 PRO 161 217 217 PRO PRO A . n A 1 162 LEU 162 218 218 LEU LEU A . n A 1 163 ALA 163 219 219 ALA ALA A . n A 1 164 HIS 164 220 220 HIS HIS A . n A 1 165 GLY 165 221 221 GLY GLY A . n A 1 166 SER 166 222 222 SER SER A . n A 1 167 LEU 167 223 223 LEU LEU A . n A 1 168 LEU 168 224 224 LEU LEU A . n A 1 169 MET 169 225 225 MET MET A . n A 1 170 MET 170 226 226 MET MET A . n A 1 171 ASN 171 227 227 ASN ASN A . n A 1 172 HIS 172 228 228 HIS HIS A . n A 1 173 PRO 173 229 229 PRO PRO A . n A 1 174 THR 174 230 230 THR THR A . n A 1 175 ASN 175 231 231 ASN ASN A . n A 1 176 THR 176 232 232 THR THR A . n A 1 177 HIS 177 233 233 HIS HIS A . n A 1 178 TRP 178 234 234 TRP TRP A . n A 1 179 TYR 179 235 235 TYR TYR A . n A 1 180 HIS 180 236 236 HIS HIS A . n A 1 181 SER 181 237 237 SER SER A . n A 1 182 LEU 182 238 238 LEU LEU A . n A 1 183 PRO 183 239 239 PRO PRO A . n A 1 184 VAL 184 240 240 VAL VAL A . n A 1 185 ARG 185 241 241 ARG ARG A . n A 1 186 LYS 186 242 242 LYS LYS A . n A 1 187 LYS 187 243 243 LYS LYS A . n A 1 188 VAL 188 244 244 VAL VAL A . n A 1 189 LEU 189 245 245 LEU LEU A . n A 1 190 ALA 190 246 246 ALA ALA A . n A 1 191 PRO 191 247 247 PRO PRO A . n A 1 192 ARG 192 248 248 ARG ARG A . n A 1 193 VAL 193 249 249 VAL VAL A . n A 1 194 ASN 194 250 250 ASN ASN A . n A 1 195 LEU 195 251 251 LEU LEU A . n A 1 196 THR 196 252 252 THR THR A . n A 1 197 PHE 197 253 253 PHE PHE A . n A 1 198 ARG 198 254 254 ARG ARG A . n A 1 199 LYS 199 255 255 LYS LYS A . n A 1 200 ILE 200 256 256 ILE ILE A . n A 1 201 LEU 201 257 257 LEU LEU A . n A 1 202 LEU 202 258 258 LEU LEU A . n B 2 1 DA 1 1 1 DA DA B . n B 2 2 DG 2 2 2 DG DG B . n B 2 3 DG 3 3 3 DG DG B . n B 2 4 DT 4 4 4 DT DT B . n B 2 5 DG 5 5 5 DG DG B . n B 2 6 DA 6 6 6 DA DA B . n B 2 7 2YR 7 7 7 2YR DC B . n B 2 8 DA 8 8 8 DA DA B . n B 2 9 DA 9 9 9 DA DA B . n B 2 10 DT 10 10 10 DT DT B . n B 2 11 DG 11 11 11 DG DG B . n B 2 12 DC 12 12 12 DC DC B . n B 2 13 DG 13 13 13 DG DG B . n C 3 1 DT 1 1 1 DT DT C . n C 3 2 DC 2 2 2 DC DC C . n C 3 3 DG 3 3 3 DG DG C . n C 3 4 DC 4 4 4 DC DC C . n C 3 5 DA 5 5 5 DA DA C . n C 3 6 DT 6 6 6 DT DT C . n C 3 7 DT 7 7 7 DT DT C . n C 3 8 DA 8 8 8 DA DA C . n C 3 9 DT 9 9 9 DT DT C . n C 3 10 DC 10 10 10 DC DC C . n C 3 11 DA 11 11 11 DA DA C . n C 3 12 DC 12 12 12 DC DC C . n C 3 13 DC 13 13 13 DC DC C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 HOH 1 301 1 HOH HOH A . D 4 HOH 2 302 2 HOH HOH A . D 4 HOH 3 303 3 HOH HOH A . D 4 HOH 4 304 4 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 HKL-2000 'data reduction' . ? 2 HKL-2000 'data scaling' . ? 3 PHASES phasing . ? 4 # _cell.entry_id 3BTZ _cell.length_a 75.523 _cell.length_b 75.523 _cell.length_c 166.198 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3BTZ _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3BTZ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.83 _exptl_crystal.density_percent_sol 67.86 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details ;8% PEG 4000, 0.1M sodium chloride, 0.05M magnesium chloride, 0.1M cacodylate, 0.004M hexammine cobalt(III) chloride, pH 6.5, VAPOR DIFFUSION, HANGING DROP ; _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 4000' ? ? ? 1 2 1 'sodium chloride' ? ? ? 1 3 1 'magnesium chloride' ? ? ? 1 4 1 cacodylate ? ? ? 1 5 1 'hexammine cobalt(III) chloride' ? ? ? 1 6 2 'PEG 4000' ? ? ? 1 7 2 'sodium chloride' ? ? ? 1 8 2 'magnesium chloride' ? ? ? 1 9 2 cacodylate ? ? ? 1 10 2 'hexammine cobalt(III) chloride' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-BM _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3BTZ _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 3.0 _reflns.d_resolution_low 20.0 _reflns.number_all 10204 _reflns.number_obs 10204 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.062 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 27.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.8 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 3.0 _reflns_shell.d_res_low 3.05 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.938 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.4 _reflns_shell.pdbx_redundancy 9.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 484 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3BTZ _refine.ls_number_reflns_obs 9626 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 3.00 _refine.ls_percent_reflns_obs 99.75 _refine.ls_R_factor_obs 0.23658 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.23515 _refine.ls_R_factor_R_free 0.26216 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 522 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.925 _refine.correlation_coeff_Fo_to_Fc_free 0.909 _refine.B_iso_mean 67.913 _refine.aniso_B[1][1] -1.20 _refine.aniso_B[2][2] -1.20 _refine.aniso_B[3][3] 2.39 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 1.056 _refine.pdbx_overall_ESU_R_Free 0.379 _refine.overall_SU_ML 0.339 _refine.overall_SU_B 41.816 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1625 _refine_hist.pdbx_number_atoms_nucleic_acid 529 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 4 _refine_hist.number_atoms_total 2158 _refine_hist.d_res_high 3.00 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.009 0.021 ? 2262 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.428 2.245 ? 3170 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.186 5.000 ? 201 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 29.617 21.410 ? 78 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 19.429 15.000 ? 277 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.905 15.000 ? 18 'X-RAY DIFFRACTION' ? r_chiral_restr 0.077 0.200 ? 344 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 1551 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.230 0.200 ? 888 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.313 0.200 ? 1438 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.169 0.200 ? 95 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.194 0.200 ? 27 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.146 0.200 ? 2 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.346 1.500 ? 1022 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.642 2.000 ? 1626 'X-RAY DIFFRACTION' ? r_scbond_it 1.110 3.000 ? 1574 'X-RAY DIFFRACTION' ? r_scangle_it 1.927 4.500 ? 1544 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 3.000 _refine_ls_shell.d_res_low 3.076 _refine_ls_shell.number_reflns_R_work 664 _refine_ls_shell.R_factor_R_work 0.4 _refine_ls_shell.percent_reflns_obs 99.58 _refine_ls_shell.R_factor_R_free 0.495 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 49 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3BTZ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3BTZ _struct.title 'Crystal structure of human ABH2 cross-linked to dsDNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3BTZ _struct_keywords.pdbx_keywords Oxidoreductase/DNA _struct_keywords.text ;protein/DNA interaction, human dioxygenase, cross-link, DNA repair, DNA damage, Iron, Metal-binding, Nucleus, Oxidoreductase, Oxidoreductase-DNA COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP ALKB2_HUMAN Q6NS38 1 ;WRHIRAEGLDCSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIP VLERIRDHVSGVTGQTFNFVLINRYKDGCDHIGEHRDDERELAPGSPIASVSFGACRDFVFRHKDSRGKSPSRRVAVVRL PLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKILL ; 57 ? 2 PDB 3BTZ 3BTZ 2 AGGTGACAATGCG ? ? 3 PDB 3BTZ 3BTZ 3 TCGCATTATCACC ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3BTZ A 1 ? 202 ? Q6NS38 57 ? 258 ? 57 258 2 2 3BTZ B 1 ? 13 ? 3BTZ 1 ? 13 ? 1 13 3 3 3BTZ C 1 ? 13 ? 3BTZ 1 ? 13 ? 1 13 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3BTZ SER A 11 ? UNP Q6NS38 CYS 67 'engineered mutation' 67 1 1 3BTZ SER A 109 ? UNP Q6NS38 CYS 165 'engineered mutation' 165 2 1 3BTZ CYS A 119 ? UNP Q6NS38 GLU 175 'engineered mutation' 175 3 1 3BTZ SER A 136 ? UNP Q6NS38 CYS 192 'engineered mutation' 192 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_prop.biol_id 1 _pdbx_struct_assembly_prop.type 'ABSA (A^2)' _pdbx_struct_assembly_prop.value 3910 _pdbx_struct_assembly_prop.details ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 18 ? VAL A 33 ? GLY A 74 VAL A 89 1 ? 16 HELX_P HELX_P2 2 THR A 37 ? LEU A 40 ? THR A 93 LEU A 96 5 ? 4 HELX_P HELX_P3 3 ILE A 79 ? GLY A 94 ? ILE A 135 GLY A 150 1 ? 16 HELX_P HELX_P4 4 ASP A 145 ? ARG A 147 ? ASP A 201 ARG A 203 5 ? 3 HELX_P HELX_P5 5 PRO A 173 ? HIS A 177 ? PRO A 229 HIS A 233 1 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? A CYS 119 SG ? ? ? 1_555 B 2YR 7 S ? ? A CYS 175 B 2YR 7 1_555 ? ? ? ? ? ? ? 2.056 ? ? covale2 covale both ? B DA 6 "O3'" ? ? ? 1_555 B 2YR 7 P ? ? B DA 6 B 2YR 7 1_555 ? ? ? ? ? ? ? 1.610 ? ? covale3 covale both ? B 2YR 7 "O3'" ? ? ? 1_555 B DA 8 P ? ? B 2YR 7 B DA 8 1_555 ? ? ? ? ? ? ? 1.605 ? ? hydrog1 hydrog ? ? B DG 2 N1 ? ? ? 1_555 C DC 13 N3 ? ? B DG 2 C DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 2 N2 ? ? ? 1_555 C DC 13 O2 ? ? B DG 2 C DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 2 O6 ? ? ? 1_555 C DC 13 N4 ? ? B DG 2 C DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 12 N3 ? ? B DG 3 C DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 12 O2 ? ? B DG 3 C DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 12 N4 ? ? B DG 3 C DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DT 4 N3 ? ? ? 1_555 C DA 11 N1 ? ? B DT 4 C DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DT 4 O4 ? ? ? 1_555 C DA 11 N6 ? ? B DT 4 C DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 5 N1 ? ? ? 1_555 C DC 10 N3 ? ? B DG 5 C DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DG 5 N2 ? ? ? 1_555 C DC 10 O2 ? ? B DG 5 C DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DG 5 O6 ? ? ? 1_555 C DC 10 N4 ? ? B DG 5 C DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DA 6 N1 ? ? ? 1_555 C DT 9 N3 ? ? B DA 6 C DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DA 6 N6 ? ? ? 1_555 C DT 9 O4 ? ? B DA 6 C DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DA 8 N1 ? ? ? 1_555 C DT 7 N3 ? ? B DA 8 C DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DA 8 N6 ? ? ? 1_555 C DT 7 O4 ? ? B DA 8 C DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DA 9 N1 ? ? ? 1_555 C DT 6 N3 ? ? B DA 9 C DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DA 9 N6 ? ? ? 1_555 C DT 6 O4 ? ? B DA 9 C DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DT 10 N3 ? ? ? 1_555 C DA 5 N1 ? ? B DT 10 C DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DT 10 O4 ? ? ? 1_555 C DA 5 N6 ? ? B DT 10 C DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DG 11 N1 ? ? ? 1_555 C DC 4 N3 ? ? B DG 11 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DG 11 N2 ? ? ? 1_555 C DC 4 O2 ? ? B DG 11 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DG 11 O6 ? ? ? 1_555 C DC 4 N4 ? ? B DG 11 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DC 12 N3 ? ? ? 1_555 C DG 3 N1 ? ? B DC 12 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DC 12 N4 ? ? ? 1_555 C DG 3 O6 ? ? B DC 12 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DC 12 O2 ? ? ? 1_555 C DG 3 N2 ? ? B DC 12 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DG 13 N1 ? ? ? 1_555 C DC 2 N3 ? ? B DG 13 C DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DG 13 N2 ? ? ? 1_555 C DC 2 O2 ? ? B DG 13 C DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DG 13 O6 ? ? ? 1_555 C DC 2 N4 ? ? B DG 13 C DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id 2YR _pdbx_modification_feature.label_asym_id B _pdbx_modification_feature.label_seq_id 7 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id CYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 119 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id 2YR _pdbx_modification_feature.auth_asym_id B _pdbx_modification_feature.auth_seq_id 7 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id CYS _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 175 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom S _pdbx_modification_feature.modified_residue_id_linking_atom SG _pdbx_modification_feature.modified_residue_id CYS _pdbx_modification_feature.ref_pcm_id 1 _pdbx_modification_feature.ref_comp_id 2YR _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Covalent chemical modification' # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id HIS _struct_mon_prot_cis.label_seq_id 172 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id HIS _struct_mon_prot_cis.auth_seq_id 228 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 173 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 229 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 6.08 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 2 ? C ? 2 ? D ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 2 ? ALA A 6 ? ARG A 58 ALA A 62 A 2 LEU A 9 ? VAL A 15 ? LEU A 65 VAL A 71 A 3 SER A 166 ? MET A 170 ? SER A 222 MET A 226 A 4 ILE A 128 ? GLY A 134 ? ILE A 184 GLY A 190 A 5 ARG A 192 ? ARG A 198 ? ARG A 248 ARG A 254 A 6 PHE A 99 ? TYR A 105 ? PHE A 155 TYR A 161 A 7 LYS A 55 ? GLY A 60 ? LYS A 111 GLY A 116 B 1 ARG A 42 ? VAL A 45 ? ARG A 98 VAL A 101 B 2 LYS A 48 ? SER A 51 ? LYS A 104 SER A 107 C 1 TYR A 66 ? PHE A 68 ? TYR A 122 PHE A 124 C 2 LEU A 71 ? LEU A 73 ? LEU A 127 LEU A 129 D 1 ILE A 112 ? HIS A 115 ? ILE A 168 HIS A 171 D 2 TRP A 178 ? LEU A 182 ? TRP A 234 LEU A 238 D 3 ARG A 137 ? HIS A 143 ? ARG A 193 HIS A 199 D 4 VAL A 158 ? LEU A 162 ? VAL A 214 LEU A 218 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 2 ? N ARG A 58 O TYR A 13 ? O TYR A 69 A 2 3 N THR A 14 ? N THR A 70 O LEU A 167 ? O LEU A 223 A 3 4 O MET A 170 ? O MET A 226 N ILE A 128 ? N ILE A 184 A 4 5 N VAL A 131 ? N VAL A 187 O LEU A 195 ? O LEU A 251 A 5 6 O ASN A 194 ? O ASN A 250 N ASN A 103 ? N ASN A 159 A 6 7 O ILE A 102 ? O ILE A 158 N ALA A 57 ? N ALA A 113 B 1 2 N VAL A 43 ? N VAL A 99 O HIS A 50 ? O HIS A 106 C 1 2 N PHE A 68 ? N PHE A 124 O LEU A 71 ? O LEU A 127 D 1 2 N HIS A 115 ? N HIS A 171 O HIS A 180 ? O HIS A 236 D 2 3 O TYR A 179 ? O TYR A 235 N ARG A 142 ? N ARG A 198 D 3 4 N PHE A 139 ? N PHE A 195 O LEU A 160 ? O LEU A 216 # _pdbx_entry_details.entry_id 3BTZ _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" B DA 1 ? ? "O3'" B DA 1 ? ? P B DG 2 ? ? 127.29 119.70 7.59 1.20 Y 2 1 "O4'" B DG 5 ? ? "C1'" B DG 5 ? ? N9 B DG 5 ? ? 114.15 108.30 5.85 0.30 N 3 1 "C3'" B 2YR 7 ? ? "O3'" B 2YR 7 ? ? P B DA 8 ? ? 128.23 119.70 8.53 1.20 Y 4 1 "O4'" B DT 10 ? ? "C4'" B DT 10 ? ? "C3'" B DT 10 ? ? 99.53 104.50 -4.97 0.40 N 5 1 "C1'" B DT 10 ? ? "O4'" B DT 10 ? ? "C4'" B DT 10 ? ? 103.20 110.10 -6.90 1.00 N 6 1 "O4'" B DT 10 ? ? "C1'" B DT 10 ? ? N1 B DT 10 ? ? 110.24 108.30 1.94 0.30 N 7 1 "O4'" C DC 2 ? ? "C1'" C DC 2 ? ? N1 C DC 2 ? ? 111.90 108.30 3.60 0.30 N 8 1 "O4'" C DG 3 ? ? "C4'" C DG 3 ? ? "C3'" C DG 3 ? ? 100.26 104.50 -4.24 0.40 N 9 1 "C1'" C DG 3 ? ? "O4'" C DG 3 ? ? "C4'" C DG 3 ? ? 102.53 110.10 -7.57 1.00 N 10 1 "O4'" C DG 3 ? ? "C1'" C DG 3 ? ? "C2'" C DG 3 ? ? 100.49 105.90 -5.41 0.80 N 11 1 "C3'" C DC 4 ? ? "C2'" C DC 4 ? ? "C1'" C DC 4 ? ? 97.31 102.40 -5.09 0.80 N 12 1 "O4'" C DC 4 ? ? "C1'" C DC 4 ? ? N1 C DC 4 ? ? 113.47 108.30 5.17 0.30 N 13 1 "O4'" C DT 7 ? ? "C1'" C DT 7 ? ? N1 C DT 7 ? ? 110.74 108.30 2.44 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 97 ? ? -142.12 20.94 2 1 PRO A 109 ? ? -61.70 53.02 3 1 ARG A 110 ? ? 172.48 -166.78 4 1 SER A 125 ? ? 27.86 49.17 5 1 TRP A 134 ? ? -49.22 154.35 6 1 PRO A 229 ? ? -95.28 38.23 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 11.8747 28.9889 17.4350 0.0095 -0.5925 -0.0624 -0.0502 -0.0449 -0.1447 4.5097 5.5344 4.6044 -2.0618 1.2594 -0.3992 0.1622 0.4393 -0.4507 -0.4022 -0.1401 0.0910 0.3309 -0.4372 -0.0221 'X-RAY DIFFRACTION' 2 ? refined -3.2319 43.7234 14.3142 0.0515 -0.2858 0.1791 0.0507 -0.0360 -0.1593 4.9003 2.4648 13.3738 -1.5348 0.3246 -2.5952 -0.0421 0.0722 0.4387 0.1261 0.1829 0.7753 -0.8167 -2.1339 -0.1408 'X-RAY DIFFRACTION' 3 ? refined -2.8473 42.9092 16.9766 -0.0452 -0.0467 0.2081 0.0082 -0.0220 -0.1073 3.0182 2.1809 15.4977 2.2181 -1.2398 -2.9708 0.1047 -0.0166 0.3882 -0.2968 0.0894 0.5347 -0.0454 -0.7853 -0.1941 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 57 C 1 A 258 C 202 ? 'X-RAY DIFFRACTION' ? 2 2 B 1 A 1 B 13 A 13 ? 'X-RAY DIFFRACTION' ? 3 3 C 1 B 1 C 13 B 13 ? 'X-RAY DIFFRACTION' ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 2YR P P N N 1 2YR OP1 O N N 2 2YR OP2 O N N 3 2YR "O5'" O N N 4 2YR "C5'" C N N 5 2YR "C4'" C N R 6 2YR "O4'" O N N 7 2YR "C3'" C N S 8 2YR "O3'" O N N 9 2YR "C2'" C N N 10 2YR "C1'" C N R 11 2YR N1 N N N 12 2YR C2 C N N 13 2YR O2 O N N 14 2YR N3 N N N 15 2YR C4 C N N 16 2YR N4 N N N 17 2YR C5 C N N 18 2YR C6 C N N 19 2YR S S N N 20 2YR C8 C N N 21 2YR C9 C N N 22 2YR H2 H N N 23 2YR H3 H N N 24 2YR H4 H N N 25 2YR H5 H N N 26 2YR H6 H N N 27 2YR H7 H N N 28 2YR H8 H N N 29 2YR H9 H N N 30 2YR H10 H N N 31 2YR H11 H N N 32 2YR H12 H N N 33 2YR H13 H N N 34 2YR H14 H N N 35 2YR H15 H N N 36 2YR H16 H N N 37 2YR H17 H N N 38 2YR H18 H N N 39 2YR OP3 O N N 40 2YR H20 H N N 41 ALA N N N N 42 ALA CA C N S 43 ALA C C N N 44 ALA O O N N 45 ALA CB C N N 46 ALA OXT O N N 47 ALA H H N N 48 ALA H2 H N N 49 ALA HA H N N 50 ALA HB1 H N N 51 ALA HB2 H N N 52 ALA HB3 H N N 53 ALA HXT H N N 54 ARG N N N N 55 ARG CA C N S 56 ARG C C N N 57 ARG O O N N 58 ARG CB C N N 59 ARG CG C N N 60 ARG CD C N N 61 ARG NE N N N 62 ARG CZ C N N 63 ARG NH1 N N N 64 ARG NH2 N N N 65 ARG OXT O N N 66 ARG H H N N 67 ARG H2 H N N 68 ARG HA H N N 69 ARG HB2 H N N 70 ARG HB3 H N N 71 ARG HG2 H N N 72 ARG HG3 H N N 73 ARG HD2 H N N 74 ARG HD3 H N N 75 ARG HE H N N 76 ARG HH11 H N N 77 ARG HH12 H N N 78 ARG HH21 H N N 79 ARG HH22 H N N 80 ARG HXT H N N 81 ASN N N N N 82 ASN CA C N S 83 ASN C C N N 84 ASN O O N N 85 ASN CB C N N 86 ASN CG C N N 87 ASN OD1 O N N 88 ASN ND2 N N N 89 ASN OXT O N N 90 ASN H H N N 91 ASN H2 H N N 92 ASN HA H N N 93 ASN HB2 H N N 94 ASN HB3 H N N 95 ASN HD21 H N N 96 ASN HD22 H N N 97 ASN HXT H N N 98 ASP N N N N 99 ASP CA C N S 100 ASP C C N N 101 ASP O O N N 102 ASP CB C N N 103 ASP CG C N N 104 ASP OD1 O N N 105 ASP OD2 O N N 106 ASP OXT O N N 107 ASP H H N N 108 ASP H2 H N N 109 ASP HA H N N 110 ASP HB2 H N N 111 ASP HB3 H N N 112 ASP HD2 H N N 113 ASP HXT H N N 114 CYS N N N N 115 CYS CA C N R 116 CYS C C N N 117 CYS O O N N 118 CYS CB C N N 119 CYS SG S N N 120 CYS OXT O N N 121 CYS H H N N 122 CYS H2 H N N 123 CYS HA H N N 124 CYS HB2 H N N 125 CYS HB3 H N N 126 CYS HG H N N 127 CYS HXT H N N 128 DA OP3 O N N 129 DA P P N N 130 DA OP1 O N N 131 DA OP2 O N N 132 DA "O5'" O N N 133 DA "C5'" C N N 134 DA "C4'" C N R 135 DA "O4'" O N N 136 DA "C3'" C N S 137 DA "O3'" O N N 138 DA "C2'" C N N 139 DA "C1'" C N R 140 DA N9 N Y N 141 DA C8 C Y N 142 DA N7 N Y N 143 DA C5 C Y N 144 DA C6 C Y N 145 DA N6 N N N 146 DA N1 N Y N 147 DA C2 C Y N 148 DA N3 N Y N 149 DA C4 C Y N 150 DA HOP3 H N N 151 DA HOP2 H N N 152 DA "H5'" H N N 153 DA "H5''" H N N 154 DA "H4'" H N N 155 DA "H3'" H N N 156 DA "HO3'" H N N 157 DA "H2'" H N N 158 DA "H2''" H N N 159 DA "H1'" H N N 160 DA H8 H N N 161 DA H61 H N N 162 DA H62 H N N 163 DA H2 H N N 164 DC OP3 O N N 165 DC P P N N 166 DC OP1 O N N 167 DC OP2 O N N 168 DC "O5'" O N N 169 DC "C5'" C N N 170 DC "C4'" C N R 171 DC "O4'" O N N 172 DC "C3'" C N S 173 DC "O3'" O N N 174 DC "C2'" C N N 175 DC "C1'" C N R 176 DC N1 N N N 177 DC C2 C N N 178 DC O2 O N N 179 DC N3 N N N 180 DC C4 C N N 181 DC N4 N N N 182 DC C5 C N N 183 DC C6 C N N 184 DC HOP3 H N N 185 DC HOP2 H N N 186 DC "H5'" H N N 187 DC "H5''" H N N 188 DC "H4'" H N N 189 DC "H3'" H N N 190 DC "HO3'" H N N 191 DC "H2'" H N N 192 DC "H2''" H N N 193 DC "H1'" H N N 194 DC H41 H N N 195 DC H42 H N N 196 DC H5 H N N 197 DC H6 H N N 198 DG OP3 O N N 199 DG P P N N 200 DG OP1 O N N 201 DG OP2 O N N 202 DG "O5'" O N N 203 DG "C5'" C N N 204 DG "C4'" C N R 205 DG "O4'" O N N 206 DG "C3'" C N S 207 DG "O3'" O N N 208 DG "C2'" C N N 209 DG "C1'" C N R 210 DG N9 N Y N 211 DG C8 C Y N 212 DG N7 N Y N 213 DG C5 C Y N 214 DG C6 C N N 215 DG O6 O N N 216 DG N1 N N N 217 DG C2 C N N 218 DG N2 N N N 219 DG N3 N N N 220 DG C4 C Y N 221 DG HOP3 H N N 222 DG HOP2 H N N 223 DG "H5'" H N N 224 DG "H5''" H N N 225 DG "H4'" H N N 226 DG "H3'" H N N 227 DG "HO3'" H N N 228 DG "H2'" H N N 229 DG "H2''" H N N 230 DG "H1'" H N N 231 DG H8 H N N 232 DG H1 H N N 233 DG H21 H N N 234 DG H22 H N N 235 DT OP3 O N N 236 DT P P N N 237 DT OP1 O N N 238 DT OP2 O N N 239 DT "O5'" O N N 240 DT "C5'" C N N 241 DT "C4'" C N R 242 DT "O4'" O N N 243 DT "C3'" C N S 244 DT "O3'" O N N 245 DT "C2'" C N N 246 DT "C1'" C N R 247 DT N1 N N N 248 DT C2 C N N 249 DT O2 O N N 250 DT N3 N N N 251 DT C4 C N N 252 DT O4 O N N 253 DT C5 C N N 254 DT C7 C N N 255 DT C6 C N N 256 DT HOP3 H N N 257 DT HOP2 H N N 258 DT "H5'" H N N 259 DT "H5''" H N N 260 DT "H4'" H N N 261 DT "H3'" H N N 262 DT "HO3'" H N N 263 DT "H2'" H N N 264 DT "H2''" H N N 265 DT "H1'" H N N 266 DT H3 H N N 267 DT H71 H N N 268 DT H72 H N N 269 DT H73 H N N 270 DT H6 H N N 271 GLN N N N N 272 GLN CA C N S 273 GLN C C N N 274 GLN O O N N 275 GLN CB C N N 276 GLN CG C N N 277 GLN CD C N N 278 GLN OE1 O N N 279 GLN NE2 N N N 280 GLN OXT O N N 281 GLN H H N N 282 GLN H2 H N N 283 GLN HA H N N 284 GLN HB2 H N N 285 GLN HB3 H N N 286 GLN HG2 H N N 287 GLN HG3 H N N 288 GLN HE21 H N N 289 GLN HE22 H N N 290 GLN HXT H N N 291 GLU N N N N 292 GLU CA C N S 293 GLU C C N N 294 GLU O O N N 295 GLU CB C N N 296 GLU CG C N N 297 GLU CD C N N 298 GLU OE1 O N N 299 GLU OE2 O N N 300 GLU OXT O N N 301 GLU H H N N 302 GLU H2 H N N 303 GLU HA H N N 304 GLU HB2 H N N 305 GLU HB3 H N N 306 GLU HG2 H N N 307 GLU HG3 H N N 308 GLU HE2 H N N 309 GLU HXT H N N 310 GLY N N N N 311 GLY CA C N N 312 GLY C C N N 313 GLY O O N N 314 GLY OXT O N N 315 GLY H H N N 316 GLY H2 H N N 317 GLY HA2 H N N 318 GLY HA3 H N N 319 GLY HXT H N N 320 HIS N N N N 321 HIS CA C N S 322 HIS C C N N 323 HIS O O N N 324 HIS CB C N N 325 HIS CG C Y N 326 HIS ND1 N Y N 327 HIS CD2 C Y N 328 HIS CE1 C Y N 329 HIS NE2 N Y N 330 HIS OXT O N N 331 HIS H H N N 332 HIS H2 H N N 333 HIS HA H N N 334 HIS HB2 H N N 335 HIS HB3 H N N 336 HIS HD1 H N N 337 HIS HD2 H N N 338 HIS HE1 H N N 339 HIS HE2 H N N 340 HIS HXT H N N 341 HOH O O N N 342 HOH H1 H N N 343 HOH H2 H N N 344 ILE N N N N 345 ILE CA C N S 346 ILE C C N N 347 ILE O O N N 348 ILE CB C N S 349 ILE CG1 C N N 350 ILE CG2 C N N 351 ILE CD1 C N N 352 ILE OXT O N N 353 ILE H H N N 354 ILE H2 H N N 355 ILE HA H N N 356 ILE HB H N N 357 ILE HG12 H N N 358 ILE HG13 H N N 359 ILE HG21 H N N 360 ILE HG22 H N N 361 ILE HG23 H N N 362 ILE HD11 H N N 363 ILE HD12 H N N 364 ILE HD13 H N N 365 ILE HXT H N N 366 LEU N N N N 367 LEU CA C N S 368 LEU C C N N 369 LEU O O N N 370 LEU CB C N N 371 LEU CG C N N 372 LEU CD1 C N N 373 LEU CD2 C N N 374 LEU OXT O N N 375 LEU H H N N 376 LEU H2 H N N 377 LEU HA H N N 378 LEU HB2 H N N 379 LEU HB3 H N N 380 LEU HG H N N 381 LEU HD11 H N N 382 LEU HD12 H N N 383 LEU HD13 H N N 384 LEU HD21 H N N 385 LEU HD22 H N N 386 LEU HD23 H N N 387 LEU HXT H N N 388 LYS N N N N 389 LYS CA C N S 390 LYS C C N N 391 LYS O O N N 392 LYS CB C N N 393 LYS CG C N N 394 LYS CD C N N 395 LYS CE C N N 396 LYS NZ N N N 397 LYS OXT O N N 398 LYS H H N N 399 LYS H2 H N N 400 LYS HA H N N 401 LYS HB2 H N N 402 LYS HB3 H N N 403 LYS HG2 H N N 404 LYS HG3 H N N 405 LYS HD2 H N N 406 LYS HD3 H N N 407 LYS HE2 H N N 408 LYS HE3 H N N 409 LYS HZ1 H N N 410 LYS HZ2 H N N 411 LYS HZ3 H N N 412 LYS HXT H N N 413 MET N N N N 414 MET CA C N S 415 MET C C N N 416 MET O O N N 417 MET CB C N N 418 MET CG C N N 419 MET SD S N N 420 MET CE C N N 421 MET OXT O N N 422 MET H H N N 423 MET H2 H N N 424 MET HA H N N 425 MET HB2 H N N 426 MET HB3 H N N 427 MET HG2 H N N 428 MET HG3 H N N 429 MET HE1 H N N 430 MET HE2 H N N 431 MET HE3 H N N 432 MET HXT H N N 433 PHE N N N N 434 PHE CA C N S 435 PHE C C N N 436 PHE O O N N 437 PHE CB C N N 438 PHE CG C Y N 439 PHE CD1 C Y N 440 PHE CD2 C Y N 441 PHE CE1 C Y N 442 PHE CE2 C Y N 443 PHE CZ C Y N 444 PHE OXT O N N 445 PHE H H N N 446 PHE H2 H N N 447 PHE HA H N N 448 PHE HB2 H N N 449 PHE HB3 H N N 450 PHE HD1 H N N 451 PHE HD2 H N N 452 PHE HE1 H N N 453 PHE HE2 H N N 454 PHE HZ H N N 455 PHE HXT H N N 456 PRO N N N N 457 PRO CA C N S 458 PRO C C N N 459 PRO O O N N 460 PRO CB C N N 461 PRO CG C N N 462 PRO CD C N N 463 PRO OXT O N N 464 PRO H H N N 465 PRO HA H N N 466 PRO HB2 H N N 467 PRO HB3 H N N 468 PRO HG2 H N N 469 PRO HG3 H N N 470 PRO HD2 H N N 471 PRO HD3 H N N 472 PRO HXT H N N 473 SER N N N N 474 SER CA C N S 475 SER C C N N 476 SER O O N N 477 SER CB C N N 478 SER OG O N N 479 SER OXT O N N 480 SER H H N N 481 SER H2 H N N 482 SER HA H N N 483 SER HB2 H N N 484 SER HB3 H N N 485 SER HG H N N 486 SER HXT H N N 487 THR N N N N 488 THR CA C N S 489 THR C C N N 490 THR O O N N 491 THR CB C N R 492 THR OG1 O N N 493 THR CG2 C N N 494 THR OXT O N N 495 THR H H N N 496 THR H2 H N N 497 THR HA H N N 498 THR HB H N N 499 THR HG1 H N N 500 THR HG21 H N N 501 THR HG22 H N N 502 THR HG23 H N N 503 THR HXT H N N 504 TRP N N N N 505 TRP CA C N S 506 TRP C C N N 507 TRP O O N N 508 TRP CB C N N 509 TRP CG C Y N 510 TRP CD1 C Y N 511 TRP CD2 C Y N 512 TRP NE1 N Y N 513 TRP CE2 C Y N 514 TRP CE3 C Y N 515 TRP CZ2 C Y N 516 TRP CZ3 C Y N 517 TRP CH2 C Y N 518 TRP OXT O N N 519 TRP H H N N 520 TRP H2 H N N 521 TRP HA H N N 522 TRP HB2 H N N 523 TRP HB3 H N N 524 TRP HD1 H N N 525 TRP HE1 H N N 526 TRP HE3 H N N 527 TRP HZ2 H N N 528 TRP HZ3 H N N 529 TRP HH2 H N N 530 TRP HXT H N N 531 TYR N N N N 532 TYR CA C N S 533 TYR C C N N 534 TYR O O N N 535 TYR CB C N N 536 TYR CG C Y N 537 TYR CD1 C Y N 538 TYR CD2 C Y N 539 TYR CE1 C Y N 540 TYR CE2 C Y N 541 TYR CZ C Y N 542 TYR OH O N N 543 TYR OXT O N N 544 TYR H H N N 545 TYR H2 H N N 546 TYR HA H N N 547 TYR HB2 H N N 548 TYR HB3 H N N 549 TYR HD1 H N N 550 TYR HD2 H N N 551 TYR HE1 H N N 552 TYR HE2 H N N 553 TYR HH H N N 554 TYR HXT H N N 555 VAL N N N N 556 VAL CA C N S 557 VAL C C N N 558 VAL O O N N 559 VAL CB C N N 560 VAL CG1 C N N 561 VAL CG2 C N N 562 VAL OXT O N N 563 VAL H H N N 564 VAL H2 H N N 565 VAL HA H N N 566 VAL HB H N N 567 VAL HG11 H N N 568 VAL HG12 H N N 569 VAL HG13 H N N 570 VAL HG21 H N N 571 VAL HG22 H N N 572 VAL HG23 H N N 573 VAL HXT H N N 574 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2YR S C8 sing N N 1 2YR C8 C9 sing N N 2 2YR N4 C9 sing N N 3 2YR N4 C4 sing N N 4 2YR C4 N3 doub N N 5 2YR C4 C5 sing N N 6 2YR N3 C2 sing N N 7 2YR C5 C6 doub N N 8 2YR C2 O2 doub N N 9 2YR C2 N1 sing N N 10 2YR C6 N1 sing N N 11 2YR N1 "C1'" sing N N 12 2YR "C2'" "C3'" sing N N 13 2YR "C2'" "C1'" sing N N 14 2YR "C3'" "O3'" sing N N 15 2YR "C3'" "C4'" sing N N 16 2YR "C1'" "O4'" sing N N 17 2YR "O4'" "C4'" sing N N 18 2YR "C4'" "C5'" sing N N 19 2YR "C5'" "O5'" sing N N 20 2YR "O5'" P sing N N 21 2YR OP2 P sing N N 22 2YR P OP1 doub N N 23 2YR OP2 H2 sing N N 24 2YR "C5'" H3 sing N N 25 2YR "C5'" H4 sing N N 26 2YR "C4'" H5 sing N N 27 2YR "C3'" H6 sing N N 28 2YR "O3'" H7 sing N N 29 2YR "C2'" H8 sing N N 30 2YR "C2'" H9 sing N N 31 2YR "C1'" H10 sing N N 32 2YR N4 H11 sing N N 33 2YR C5 H12 sing N N 34 2YR C6 H13 sing N N 35 2YR S H14 sing N N 36 2YR C8 H15 sing N N 37 2YR C8 H16 sing N N 38 2YR C9 H17 sing N N 39 2YR C9 H18 sing N N 40 2YR P OP3 sing N N 41 2YR OP3 H20 sing N N 42 ALA N CA sing N N 43 ALA N H sing N N 44 ALA N H2 sing N N 45 ALA CA C sing N N 46 ALA CA CB sing N N 47 ALA CA HA sing N N 48 ALA C O doub N N 49 ALA C OXT sing N N 50 ALA CB HB1 sing N N 51 ALA CB HB2 sing N N 52 ALA CB HB3 sing N N 53 ALA OXT HXT sing N N 54 ARG N CA sing N N 55 ARG N H sing N N 56 ARG N H2 sing N N 57 ARG CA C sing N N 58 ARG CA CB sing N N 59 ARG CA HA sing N N 60 ARG C O doub N N 61 ARG C OXT sing N N 62 ARG CB CG sing N N 63 ARG CB HB2 sing N N 64 ARG CB HB3 sing N N 65 ARG CG CD sing N N 66 ARG CG HG2 sing N N 67 ARG CG HG3 sing N N 68 ARG CD NE sing N N 69 ARG CD HD2 sing N N 70 ARG CD HD3 sing N N 71 ARG NE CZ sing N N 72 ARG NE HE sing N N 73 ARG CZ NH1 sing N N 74 ARG CZ NH2 doub N N 75 ARG NH1 HH11 sing N N 76 ARG NH1 HH12 sing N N 77 ARG NH2 HH21 sing N N 78 ARG NH2 HH22 sing N N 79 ARG OXT HXT sing N N 80 ASN N CA sing N N 81 ASN N H sing N N 82 ASN N H2 sing N N 83 ASN CA C sing N N 84 ASN CA CB sing N N 85 ASN CA HA sing N N 86 ASN C O doub N N 87 ASN C OXT sing N N 88 ASN CB CG sing N N 89 ASN CB HB2 sing N N 90 ASN CB HB3 sing N N 91 ASN CG OD1 doub N N 92 ASN CG ND2 sing N N 93 ASN ND2 HD21 sing N N 94 ASN ND2 HD22 sing N N 95 ASN OXT HXT sing N N 96 ASP N CA sing N N 97 ASP N H sing N N 98 ASP N H2 sing N N 99 ASP CA C sing N N 100 ASP CA CB sing N N 101 ASP CA HA sing N N 102 ASP C O doub N N 103 ASP C OXT sing N N 104 ASP CB CG sing N N 105 ASP CB HB2 sing N N 106 ASP CB HB3 sing N N 107 ASP CG OD1 doub N N 108 ASP CG OD2 sing N N 109 ASP OD2 HD2 sing N N 110 ASP OXT HXT sing N N 111 CYS N CA sing N N 112 CYS N H sing N N 113 CYS N H2 sing N N 114 CYS CA C sing N N 115 CYS CA CB sing N N 116 CYS CA HA sing N N 117 CYS C O doub N N 118 CYS C OXT sing N N 119 CYS CB SG sing N N 120 CYS CB HB2 sing N N 121 CYS CB HB3 sing N N 122 CYS SG HG sing N N 123 CYS OXT HXT sing N N 124 DA OP3 P sing N N 125 DA OP3 HOP3 sing N N 126 DA P OP1 doub N N 127 DA P OP2 sing N N 128 DA P "O5'" sing N N 129 DA OP2 HOP2 sing N N 130 DA "O5'" "C5'" sing N N 131 DA "C5'" "C4'" sing N N 132 DA "C5'" "H5'" sing N N 133 DA "C5'" "H5''" sing N N 134 DA "C4'" "O4'" sing N N 135 DA "C4'" "C3'" sing N N 136 DA "C4'" "H4'" sing N N 137 DA "O4'" "C1'" sing N N 138 DA "C3'" "O3'" sing N N 139 DA "C3'" "C2'" sing N N 140 DA "C3'" "H3'" sing N N 141 DA "O3'" "HO3'" sing N N 142 DA "C2'" "C1'" sing N N 143 DA "C2'" "H2'" sing N N 144 DA "C2'" "H2''" sing N N 145 DA "C1'" N9 sing N N 146 DA "C1'" "H1'" sing N N 147 DA N9 C8 sing Y N 148 DA N9 C4 sing Y N 149 DA C8 N7 doub Y N 150 DA C8 H8 sing N N 151 DA N7 C5 sing Y N 152 DA C5 C6 sing Y N 153 DA C5 C4 doub Y N 154 DA C6 N6 sing N N 155 DA C6 N1 doub Y N 156 DA N6 H61 sing N N 157 DA N6 H62 sing N N 158 DA N1 C2 sing Y N 159 DA C2 N3 doub Y N 160 DA C2 H2 sing N N 161 DA N3 C4 sing Y N 162 DC OP3 P sing N N 163 DC OP3 HOP3 sing N N 164 DC P OP1 doub N N 165 DC P OP2 sing N N 166 DC P "O5'" sing N N 167 DC OP2 HOP2 sing N N 168 DC "O5'" "C5'" sing N N 169 DC "C5'" "C4'" sing N N 170 DC "C5'" "H5'" sing N N 171 DC "C5'" "H5''" sing N N 172 DC "C4'" "O4'" sing N N 173 DC "C4'" "C3'" sing N N 174 DC "C4'" "H4'" sing N N 175 DC "O4'" "C1'" sing N N 176 DC "C3'" "O3'" sing N N 177 DC "C3'" "C2'" sing N N 178 DC "C3'" "H3'" sing N N 179 DC "O3'" "HO3'" sing N N 180 DC "C2'" "C1'" sing N N 181 DC "C2'" "H2'" sing N N 182 DC "C2'" "H2''" sing N N 183 DC "C1'" N1 sing N N 184 DC "C1'" "H1'" sing N N 185 DC N1 C2 sing N N 186 DC N1 C6 sing N N 187 DC C2 O2 doub N N 188 DC C2 N3 sing N N 189 DC N3 C4 doub N N 190 DC C4 N4 sing N N 191 DC C4 C5 sing N N 192 DC N4 H41 sing N N 193 DC N4 H42 sing N N 194 DC C5 C6 doub N N 195 DC C5 H5 sing N N 196 DC C6 H6 sing N N 197 DG OP3 P sing N N 198 DG OP3 HOP3 sing N N 199 DG P OP1 doub N N 200 DG P OP2 sing N N 201 DG P "O5'" sing N N 202 DG OP2 HOP2 sing N N 203 DG "O5'" "C5'" sing N N 204 DG "C5'" "C4'" sing N N 205 DG "C5'" "H5'" sing N N 206 DG "C5'" "H5''" sing N N 207 DG "C4'" "O4'" sing N N 208 DG "C4'" "C3'" sing N N 209 DG "C4'" "H4'" sing N N 210 DG "O4'" "C1'" sing N N 211 DG "C3'" "O3'" sing N N 212 DG "C3'" "C2'" sing N N 213 DG "C3'" "H3'" sing N N 214 DG "O3'" "HO3'" sing N N 215 DG "C2'" "C1'" sing N N 216 DG "C2'" "H2'" sing N N 217 DG "C2'" "H2''" sing N N 218 DG "C1'" N9 sing N N 219 DG "C1'" "H1'" sing N N 220 DG N9 C8 sing Y N 221 DG N9 C4 sing Y N 222 DG C8 N7 doub Y N 223 DG C8 H8 sing N N 224 DG N7 C5 sing Y N 225 DG C5 C6 sing N N 226 DG C5 C4 doub Y N 227 DG C6 O6 doub N N 228 DG C6 N1 sing N N 229 DG N1 C2 sing N N 230 DG N1 H1 sing N N 231 DG C2 N2 sing N N 232 DG C2 N3 doub N N 233 DG N2 H21 sing N N 234 DG N2 H22 sing N N 235 DG N3 C4 sing N N 236 DT OP3 P sing N N 237 DT OP3 HOP3 sing N N 238 DT P OP1 doub N N 239 DT P OP2 sing N N 240 DT P "O5'" sing N N 241 DT OP2 HOP2 sing N N 242 DT "O5'" "C5'" sing N N 243 DT "C5'" "C4'" sing N N 244 DT "C5'" "H5'" sing N N 245 DT "C5'" "H5''" sing N N 246 DT "C4'" "O4'" sing N N 247 DT "C4'" "C3'" sing N N 248 DT "C4'" "H4'" sing N N 249 DT "O4'" "C1'" sing N N 250 DT "C3'" "O3'" sing N N 251 DT "C3'" "C2'" sing N N 252 DT "C3'" "H3'" sing N N 253 DT "O3'" "HO3'" sing N N 254 DT "C2'" "C1'" sing N N 255 DT "C2'" "H2'" sing N N 256 DT "C2'" "H2''" sing N N 257 DT "C1'" N1 sing N N 258 DT "C1'" "H1'" sing N N 259 DT N1 C2 sing N N 260 DT N1 C6 sing N N 261 DT C2 O2 doub N N 262 DT C2 N3 sing N N 263 DT N3 C4 sing N N 264 DT N3 H3 sing N N 265 DT C4 O4 doub N N 266 DT C4 C5 sing N N 267 DT C5 C7 sing N N 268 DT C5 C6 doub N N 269 DT C7 H71 sing N N 270 DT C7 H72 sing N N 271 DT C7 H73 sing N N 272 DT C6 H6 sing N N 273 GLN N CA sing N N 274 GLN N H sing N N 275 GLN N H2 sing N N 276 GLN CA C sing N N 277 GLN CA CB sing N N 278 GLN CA HA sing N N 279 GLN C O doub N N 280 GLN C OXT sing N N 281 GLN CB CG sing N N 282 GLN CB HB2 sing N N 283 GLN CB HB3 sing N N 284 GLN CG CD sing N N 285 GLN CG HG2 sing N N 286 GLN CG HG3 sing N N 287 GLN CD OE1 doub N N 288 GLN CD NE2 sing N N 289 GLN NE2 HE21 sing N N 290 GLN NE2 HE22 sing N N 291 GLN OXT HXT sing N N 292 GLU N CA sing N N 293 GLU N H sing N N 294 GLU N H2 sing N N 295 GLU CA C sing N N 296 GLU CA CB sing N N 297 GLU CA HA sing N N 298 GLU C O doub N N 299 GLU C OXT sing N N 300 GLU CB CG sing N N 301 GLU CB HB2 sing N N 302 GLU CB HB3 sing N N 303 GLU CG CD sing N N 304 GLU CG HG2 sing N N 305 GLU CG HG3 sing N N 306 GLU CD OE1 doub N N 307 GLU CD OE2 sing N N 308 GLU OE2 HE2 sing N N 309 GLU OXT HXT sing N N 310 GLY N CA sing N N 311 GLY N H sing N N 312 GLY N H2 sing N N 313 GLY CA C sing N N 314 GLY CA HA2 sing N N 315 GLY CA HA3 sing N N 316 GLY C O doub N N 317 GLY C OXT sing N N 318 GLY OXT HXT sing N N 319 HIS N CA sing N N 320 HIS N H sing N N 321 HIS N H2 sing N N 322 HIS CA C sing N N 323 HIS CA CB sing N N 324 HIS CA HA sing N N 325 HIS C O doub N N 326 HIS C OXT sing N N 327 HIS CB CG sing N N 328 HIS CB HB2 sing N N 329 HIS CB HB3 sing N N 330 HIS CG ND1 sing Y N 331 HIS CG CD2 doub Y N 332 HIS ND1 CE1 doub Y N 333 HIS ND1 HD1 sing N N 334 HIS CD2 NE2 sing Y N 335 HIS CD2 HD2 sing N N 336 HIS CE1 NE2 sing Y N 337 HIS CE1 HE1 sing N N 338 HIS NE2 HE2 sing N N 339 HIS OXT HXT sing N N 340 HOH O H1 sing N N 341 HOH O H2 sing N N 342 ILE N CA sing N N 343 ILE N H sing N N 344 ILE N H2 sing N N 345 ILE CA C sing N N 346 ILE CA CB sing N N 347 ILE CA HA sing N N 348 ILE C O doub N N 349 ILE C OXT sing N N 350 ILE CB CG1 sing N N 351 ILE CB CG2 sing N N 352 ILE CB HB sing N N 353 ILE CG1 CD1 sing N N 354 ILE CG1 HG12 sing N N 355 ILE CG1 HG13 sing N N 356 ILE CG2 HG21 sing N N 357 ILE CG2 HG22 sing N N 358 ILE CG2 HG23 sing N N 359 ILE CD1 HD11 sing N N 360 ILE CD1 HD12 sing N N 361 ILE CD1 HD13 sing N N 362 ILE OXT HXT sing N N 363 LEU N CA sing N N 364 LEU N H sing N N 365 LEU N H2 sing N N 366 LEU CA C sing N N 367 LEU CA CB sing N N 368 LEU CA HA sing N N 369 LEU C O doub N N 370 LEU C OXT sing N N 371 LEU CB CG sing N N 372 LEU CB HB2 sing N N 373 LEU CB HB3 sing N N 374 LEU CG CD1 sing N N 375 LEU CG CD2 sing N N 376 LEU CG HG sing N N 377 LEU CD1 HD11 sing N N 378 LEU CD1 HD12 sing N N 379 LEU CD1 HD13 sing N N 380 LEU CD2 HD21 sing N N 381 LEU CD2 HD22 sing N N 382 LEU CD2 HD23 sing N N 383 LEU OXT HXT sing N N 384 LYS N CA sing N N 385 LYS N H sing N N 386 LYS N H2 sing N N 387 LYS CA C sing N N 388 LYS CA CB sing N N 389 LYS CA HA sing N N 390 LYS C O doub N N 391 LYS C OXT sing N N 392 LYS CB CG sing N N 393 LYS CB HB2 sing N N 394 LYS CB HB3 sing N N 395 LYS CG CD sing N N 396 LYS CG HG2 sing N N 397 LYS CG HG3 sing N N 398 LYS CD CE sing N N 399 LYS CD HD2 sing N N 400 LYS CD HD3 sing N N 401 LYS CE NZ sing N N 402 LYS CE HE2 sing N N 403 LYS CE HE3 sing N N 404 LYS NZ HZ1 sing N N 405 LYS NZ HZ2 sing N N 406 LYS NZ HZ3 sing N N 407 LYS OXT HXT sing N N 408 MET N CA sing N N 409 MET N H sing N N 410 MET N H2 sing N N 411 MET CA C sing N N 412 MET CA CB sing N N 413 MET CA HA sing N N 414 MET C O doub N N 415 MET C OXT sing N N 416 MET CB CG sing N N 417 MET CB HB2 sing N N 418 MET CB HB3 sing N N 419 MET CG SD sing N N 420 MET CG HG2 sing N N 421 MET CG HG3 sing N N 422 MET SD CE sing N N 423 MET CE HE1 sing N N 424 MET CE HE2 sing N N 425 MET CE HE3 sing N N 426 MET OXT HXT sing N N 427 PHE N CA sing N N 428 PHE N H sing N N 429 PHE N H2 sing N N 430 PHE CA C sing N N 431 PHE CA CB sing N N 432 PHE CA HA sing N N 433 PHE C O doub N N 434 PHE C OXT sing N N 435 PHE CB CG sing N N 436 PHE CB HB2 sing N N 437 PHE CB HB3 sing N N 438 PHE CG CD1 doub Y N 439 PHE CG CD2 sing Y N 440 PHE CD1 CE1 sing Y N 441 PHE CD1 HD1 sing N N 442 PHE CD2 CE2 doub Y N 443 PHE CD2 HD2 sing N N 444 PHE CE1 CZ doub Y N 445 PHE CE1 HE1 sing N N 446 PHE CE2 CZ sing Y N 447 PHE CE2 HE2 sing N N 448 PHE CZ HZ sing N N 449 PHE OXT HXT sing N N 450 PRO N CA sing N N 451 PRO N CD sing N N 452 PRO N H sing N N 453 PRO CA C sing N N 454 PRO CA CB sing N N 455 PRO CA HA sing N N 456 PRO C O doub N N 457 PRO C OXT sing N N 458 PRO CB CG sing N N 459 PRO CB HB2 sing N N 460 PRO CB HB3 sing N N 461 PRO CG CD sing N N 462 PRO CG HG2 sing N N 463 PRO CG HG3 sing N N 464 PRO CD HD2 sing N N 465 PRO CD HD3 sing N N 466 PRO OXT HXT sing N N 467 SER N CA sing N N 468 SER N H sing N N 469 SER N H2 sing N N 470 SER CA C sing N N 471 SER CA CB sing N N 472 SER CA HA sing N N 473 SER C O doub N N 474 SER C OXT sing N N 475 SER CB OG sing N N 476 SER CB HB2 sing N N 477 SER CB HB3 sing N N 478 SER OG HG sing N N 479 SER OXT HXT sing N N 480 THR N CA sing N N 481 THR N H sing N N 482 THR N H2 sing N N 483 THR CA C sing N N 484 THR CA CB sing N N 485 THR CA HA sing N N 486 THR C O doub N N 487 THR C OXT sing N N 488 THR CB OG1 sing N N 489 THR CB CG2 sing N N 490 THR CB HB sing N N 491 THR OG1 HG1 sing N N 492 THR CG2 HG21 sing N N 493 THR CG2 HG22 sing N N 494 THR CG2 HG23 sing N N 495 THR OXT HXT sing N N 496 TRP N CA sing N N 497 TRP N H sing N N 498 TRP N H2 sing N N 499 TRP CA C sing N N 500 TRP CA CB sing N N 501 TRP CA HA sing N N 502 TRP C O doub N N 503 TRP C OXT sing N N 504 TRP CB CG sing N N 505 TRP CB HB2 sing N N 506 TRP CB HB3 sing N N 507 TRP CG CD1 doub Y N 508 TRP CG CD2 sing Y N 509 TRP CD1 NE1 sing Y N 510 TRP CD1 HD1 sing N N 511 TRP CD2 CE2 doub Y N 512 TRP CD2 CE3 sing Y N 513 TRP NE1 CE2 sing Y N 514 TRP NE1 HE1 sing N N 515 TRP CE2 CZ2 sing Y N 516 TRP CE3 CZ3 doub Y N 517 TRP CE3 HE3 sing N N 518 TRP CZ2 CH2 doub Y N 519 TRP CZ2 HZ2 sing N N 520 TRP CZ3 CH2 sing Y N 521 TRP CZ3 HZ3 sing N N 522 TRP CH2 HH2 sing N N 523 TRP OXT HXT sing N N 524 TYR N CA sing N N 525 TYR N H sing N N 526 TYR N H2 sing N N 527 TYR CA C sing N N 528 TYR CA CB sing N N 529 TYR CA HA sing N N 530 TYR C O doub N N 531 TYR C OXT sing N N 532 TYR CB CG sing N N 533 TYR CB HB2 sing N N 534 TYR CB HB3 sing N N 535 TYR CG CD1 doub Y N 536 TYR CG CD2 sing Y N 537 TYR CD1 CE1 sing Y N 538 TYR CD1 HD1 sing N N 539 TYR CD2 CE2 doub Y N 540 TYR CD2 HD2 sing N N 541 TYR CE1 CZ doub Y N 542 TYR CE1 HE1 sing N N 543 TYR CE2 CZ sing Y N 544 TYR CE2 HE2 sing N N 545 TYR CZ OH sing N N 546 TYR OH HH sing N N 547 TYR OXT HXT sing N N 548 VAL N CA sing N N 549 VAL N H sing N N 550 VAL N H2 sing N N 551 VAL CA C sing N N 552 VAL CA CB sing N N 553 VAL CA HA sing N N 554 VAL C O doub N N 555 VAL C OXT sing N N 556 VAL CB CG1 sing N N 557 VAL CB CG2 sing N N 558 VAL CB HB sing N N 559 VAL CG1 HG11 sing N N 560 VAL CG1 HG12 sing N N 561 VAL CG1 HG13 sing N N 562 VAL CG2 HG21 sing N N 563 VAL CG2 HG22 sing N N 564 VAL CG2 HG23 sing N N 565 VAL OXT HXT sing N N 566 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3BTZ 'double helix' 3BTZ 'b-form double helix' 3BTZ 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 2 1_555 C DC 13 1_555 -0.108 -0.474 0.073 1.091 -6.241 -3.060 1 B_DG2:DC13_C B 2 ? C 13 ? 19 1 1 B DG 3 1_555 C DC 12 1_555 -0.718 -0.186 -0.268 -7.063 -7.051 3.432 2 B_DG3:DC12_C B 3 ? C 12 ? 19 1 1 B DT 4 1_555 C DA 11 1_555 0.163 -0.269 -0.045 -1.328 -10.534 -4.989 3 B_DT4:DA11_C B 4 ? C 11 ? 20 1 1 B DG 5 1_555 C DC 10 1_555 -0.638 -0.450 -0.213 8.767 5.757 -0.613 4 B_DG5:DC10_C B 5 ? C 10 ? 19 1 1 B DA 6 1_555 C DT 9 1_555 0.465 -0.023 0.392 21.669 -12.801 16.884 5 B_DA6:DT9_C B 6 ? C 9 ? 20 1 1 B DA 8 1_555 C DT 7 1_555 -0.142 -0.333 0.204 -5.182 -12.599 2.589 6 B_DA8:DT7_C B 8 ? C 7 ? 20 1 1 B DA 9 1_555 C DT 6 1_555 0.457 -0.270 0.650 7.272 -10.151 -5.056 7 B_DA9:DT6_C B 9 ? C 6 ? 20 1 1 B DT 10 1_555 C DA 5 1_555 -0.142 -0.197 0.807 -4.952 -15.642 -6.068 8 B_DT10:DA5_C B 10 ? C 5 ? 20 1 1 B DG 11 1_555 C DC 4 1_555 -0.553 -0.181 0.063 -5.166 -4.033 -7.556 9 B_DG11:DC4_C B 11 ? C 4 ? 19 1 1 B DC 12 1_555 C DG 3 1_555 0.067 -0.302 0.716 -8.767 -12.598 -5.621 10 B_DC12:DG3_C B 12 ? C 3 ? 19 1 1 B DG 13 1_555 C DC 2 1_555 -0.557 -0.363 -0.068 1.885 -7.064 0.227 11 B_DG13:DC2_C B 13 ? C 2 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 2 1_555 C DC 13 1_555 B DG 3 1_555 C DC 12 1_555 0.424 -0.775 3.462 3.253 3.278 34.968 -1.791 -0.192 3.403 5.426 -5.384 35.262 1 BB_DG2DG3:DC12DC13_CC B 2 ? C 13 ? B 3 ? C 12 ? 1 B DG 3 1_555 C DC 12 1_555 B DT 4 1_555 C DA 11 1_555 -0.418 -0.380 3.135 -0.510 0.117 35.041 -0.648 0.621 3.139 0.194 0.847 35.045 2 BB_DG3DT4:DA11DC12_CC B 3 ? C 12 ? B 4 ? C 11 ? 1 B DT 4 1_555 C DA 11 1_555 B DG 5 1_555 C DC 10 1_555 1.087 0.936 3.234 1.978 -2.836 29.472 2.417 -1.712 3.196 -5.550 -3.871 29.670 3 BB_DT4DG5:DC10DA11_CC B 4 ? C 11 ? B 5 ? C 10 ? 1 B DG 5 1_555 C DC 10 1_555 B DA 6 1_555 C DT 9 1_555 -0.218 0.929 3.198 -4.422 5.275 43.631 0.743 -0.124 3.289 7.045 5.905 44.144 4 BB_DG5DA6:DT9DC10_CC B 5 ? C 10 ? B 6 ? C 9 ? 1 B DA 8 1_555 C DT 7 1_555 B DA 9 1_555 C DT 6 1_555 -0.538 -0.403 3.100 -1.575 7.779 33.358 -1.833 0.681 2.955 13.318 2.696 34.263 5 BB_DA8DA9:DT6DT7_CC B 8 ? C 7 ? B 9 ? C 6 ? 1 B DA 9 1_555 C DT 6 1_555 B DT 10 1_555 C DA 5 1_555 0.120 -1.196 3.601 0.008 -4.527 29.889 -1.258 -0.228 3.738 -8.715 -0.016 30.222 6 BB_DA9DT10:DA5DT6_CC B 9 ? C 6 ? B 10 ? C 5 ? 1 B DT 10 1_555 C DA 5 1_555 B DG 11 1_555 C DC 4 1_555 0.137 0.368 3.346 6.557 1.651 38.351 0.346 0.613 3.337 2.490 -9.887 38.920 7 BB_DT10DG11:DC4DA5_CC B 10 ? C 5 ? B 11 ? C 4 ? 1 B DG 11 1_555 C DC 4 1_555 B DC 12 1_555 C DG 3 1_555 -0.629 -0.419 3.424 -6.770 3.515 32.057 -1.375 -0.115 3.418 6.255 12.046 32.929 8 BB_DG11DC12:DG3DC4_CC B 11 ? C 4 ? B 12 ? C 3 ? 1 B DC 12 1_555 C DG 3 1_555 B DG 13 1_555 C DC 2 1_555 -0.136 -0.010 2.970 5.783 6.034 34.885 -0.801 0.972 2.870 9.890 -9.478 35.842 9 BB_DC12DG13:DC2DG3_CC B 12 ? C 3 ? B 13 ? C 2 ? # _atom_sites.entry_id 3BTZ _atom_sites.fract_transf_matrix[1][1] 0.013241 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013241 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006017 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_