data_3BWH # _entry.id 3BWH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3BWH pdb_00003bwh 10.2210/pdb3bwh/pdb RCSB RCSB046042 ? ? WWPDB D_1000046042 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3BWH _pdbx_database_status.recvd_initial_deposition_date 2008-01-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Chen, L.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Atomic resolution structure of cucurmosin, a novel type 1 ribosome-inactivating protein from the sarcocarp of Cucurbita moschata.' _citation.journal_abbrev J.Struct.Biol. _citation.journal_volume 164 _citation.page_first 81 _citation.page_last 87 _citation.year 2008 _citation.journal_id_ASTM JSBIEM _citation.country US _citation.journal_id_ISSN 1047-8477 _citation.journal_id_CSD 0803 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18652900 _citation.pdbx_database_id_DOI 10.1016/j.jsb.2008.06.011 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hou, X.' 1 ? primary 'Meehan, E.J.' 2 ? primary 'Xie, J.' 3 ? primary 'Huang, M.' 4 ? primary 'Chen, M.' 5 ? primary 'Chen, L.' 6 ? # _cell.entry_id 3BWH _cell.length_a 41.763 _cell.length_b 58.782 _cell.length_c 99.523 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3BWH _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat cucurmosin 27101.846 1 ? ? ? ? 2 branched man ;beta-D-xylopyranose-(1-2)-[alpha-D-mannopyranose-(1-3)][alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 1042.938 1 ? ? ? ? 3 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 5 ? ? ? ? 5 water nat water 18.015 255 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;NVRFDLSSATSSSYKTFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVS YFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAA RFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIQLLLN IGATA ; _entity_poly.pdbx_seq_one_letter_code_can ;NVRFDLSSATSSSYKTFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVS YFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAA RFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIQLLLN IGATA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 VAL n 1 3 ARG n 1 4 PHE n 1 5 ASP n 1 6 LEU n 1 7 SER n 1 8 SER n 1 9 ALA n 1 10 THR n 1 11 SER n 1 12 SER n 1 13 SER n 1 14 TYR n 1 15 LYS n 1 16 THR n 1 17 PHE n 1 18 ILE n 1 19 LYS n 1 20 ASN n 1 21 LEU n 1 22 ARG n 1 23 GLU n 1 24 ALA n 1 25 LEU n 1 26 PRO n 1 27 LYS n 1 28 ASP n 1 29 GLY n 1 30 LYS n 1 31 VAL n 1 32 TYR n 1 33 ASP n 1 34 ILE n 1 35 PRO n 1 36 VAL n 1 37 LEU n 1 38 LEU n 1 39 SER n 1 40 THR n 1 41 VAL n 1 42 MET n 1 43 ASP n 1 44 SER n 1 45 ARG n 1 46 ARG n 1 47 PHE n 1 48 ILE n 1 49 LEU n 1 50 ILE n 1 51 ASP n 1 52 LEU n 1 53 VAL n 1 54 ASN n 1 55 TYR n 1 56 ASP n 1 57 GLY n 1 58 GLN n 1 59 SER n 1 60 ILE n 1 61 THR n 1 62 ALA n 1 63 ALA n 1 64 ILE n 1 65 ASP n 1 66 VAL n 1 67 LEU n 1 68 ASN n 1 69 VAL n 1 70 TYR n 1 71 ILE n 1 72 VAL n 1 73 ALA n 1 74 TYR n 1 75 SER n 1 76 THR n 1 77 GLY n 1 78 THR n 1 79 VAL n 1 80 SER n 1 81 TYR n 1 82 PHE n 1 83 PHE n 1 84 GLN n 1 85 GLN n 1 86 VAL n 1 87 PRO n 1 88 ALA n 1 89 GLN n 1 90 ALA n 1 91 PRO n 1 92 LYS n 1 93 LEU n 1 94 LEU n 1 95 PHE n 1 96 LYS n 1 97 GLY n 1 98 THR n 1 99 GLN n 1 100 GLN n 1 101 ARG n 1 102 THR n 1 103 LEU n 1 104 PRO n 1 105 TYR n 1 106 THR n 1 107 GLY n 1 108 ASN n 1 109 TYR n 1 110 GLU n 1 111 ASN n 1 112 LEU n 1 113 GLN n 1 114 THR n 1 115 ALA n 1 116 ALA n 1 117 LYS n 1 118 LYS n 1 119 LEU n 1 120 ARG n 1 121 GLU n 1 122 ASN n 1 123 ILE n 1 124 GLU n 1 125 LEU n 1 126 GLY n 1 127 LEU n 1 128 PRO n 1 129 ALA n 1 130 LEU n 1 131 ASP n 1 132 SER n 1 133 ALA n 1 134 ILE n 1 135 THR n 1 136 THR n 1 137 LEU n 1 138 PHE n 1 139 HIS n 1 140 TYR n 1 141 ASN n 1 142 ALA n 1 143 GLU n 1 144 ALA n 1 145 ALA n 1 146 ALA n 1 147 SER n 1 148 ALA n 1 149 LEU n 1 150 LEU n 1 151 VAL n 1 152 LEU n 1 153 ILE n 1 154 GLN n 1 155 THR n 1 156 THR n 1 157 SER n 1 158 GLU n 1 159 ALA n 1 160 ALA n 1 161 ARG n 1 162 PHE n 1 163 ARG n 1 164 TYR n 1 165 ILE n 1 166 GLU n 1 167 LEU n 1 168 GLN n 1 169 ILE n 1 170 ALA n 1 171 ASN n 1 172 ASN n 1 173 VAL n 1 174 GLY n 1 175 THR n 1 176 LYS n 1 177 PHE n 1 178 LYS n 1 179 PRO n 1 180 SER n 1 181 GLN n 1 182 THR n 1 183 ILE n 1 184 ILE n 1 185 SER n 1 186 LEU n 1 187 GLU n 1 188 ASN n 1 189 ASN n 1 190 TRP n 1 191 SER n 1 192 ALA n 1 193 LEU n 1 194 SER n 1 195 LYS n 1 196 GLN n 1 197 ILE n 1 198 GLN n 1 199 ILE n 1 200 ALA n 1 201 LYS n 1 202 ASN n 1 203 LYS n 1 204 ASN n 1 205 GLY n 1 206 GLN n 1 207 PHE n 1 208 GLU n 1 209 THR n 1 210 PRO n 1 211 VAL n 1 212 ILE n 1 213 LEU n 1 214 ILE n 1 215 ASP n 1 216 PRO n 1 217 GLN n 1 218 GLY n 1 219 ASN n 1 220 ARG n 1 221 VAL n 1 222 GLN n 1 223 ILE n 1 224 THR n 1 225 ASN n 1 226 VAL n 1 227 THR n 1 228 SER n 1 229 ASN n 1 230 VAL n 1 231 VAL n 1 232 THR n 1 233 GLN n 1 234 ASN n 1 235 ILE n 1 236 GLN n 1 237 LEU n 1 238 LEU n 1 239 LEU n 1 240 ASN n 1 241 ILE n 1 242 GLY n 1 243 ALA n 1 244 THR n 1 245 ALA n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Cucurbita moschata' _entity_src_nat.pdbx_ncbi_taxonomy_id 3662 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details 'sarcocarp of pumpkin' # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3BWH _struct_ref.pdbx_db_accession 3BWH _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NVRFDLSSATSSSYKTFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVS YFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAA RFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIQLLLN IGATA ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3BWH _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 245 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 3BWH _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 245 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 245 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 XYP 'D-saccharide, beta linking' . beta-D-xylopyranose 'beta-D-xylose; D-xylose; xylose' 'C5 H10 O5' 150.130 # _exptl.entry_id 3BWH _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.25 _exptl_crystal.density_percent_sol 45.42 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.90 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '100 mM phosphate buffer, 20% PEG6000, pH 5.9, VAPOR DIFFUSION, HANGING DROP, temperature 298K, pH 5.90' # _diffrn.id 1 _diffrn.ambient_temp 93.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.pdbx_collection_date 2002-11-01 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator MIRRORS _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength 1.0 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3BWH _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 1.000 _reflns.number_obs 111623 _reflns.number_all ? _reflns.percent_possible_obs 84.0 _reflns.pdbx_Rmerge_I_obs 0.10800 _reflns.pdbx_Rsym_value 0.10800 _reflns.pdbx_netI_over_sigmaI 22.9000 _reflns.B_iso_Wilson_estimate 9.70 _reflns.pdbx_redundancy 7.400 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.00 _reflns_shell.d_res_low 1.04 _reflns_shell.percent_possible_all 40.6 _reflns_shell.Rmerge_I_obs 0.39300 _reflns_shell.pdbx_Rsym_value 0.39300 _reflns_shell.meanI_over_sigI_obs 1.300 _reflns_shell.pdbx_redundancy 2.10 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3BWH _refine.ls_number_reflns_obs 105926 _refine.ls_number_reflns_all 105926 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 38.52 _refine.ls_d_res_high 1.00 _refine.ls_percent_reflns_obs 84.0 _refine.ls_R_factor_obs 0.172 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.171 _refine.ls_R_factor_R_free 0.179 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 5611 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.967 _refine.correlation_coeff_Fo_to_Fc_free 0.963 _refine.B_iso_mean 9.72 _refine.aniso_B[1][1] -0.06000 _refine.aniso_B[2][2] 0.10000 _refine.aniso_B[3][3] -0.03000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 1TCS _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.030 _refine.pdbx_overall_ESU_R_Free 0.028 _refine.overall_SU_ML 0.015 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 0.623 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1907 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 95 _refine_hist.number_atoms_solvent 255 _refine_hist.number_atoms_total 2257 _refine_hist.d_res_high 1.00 _refine_hist.d_res_low 38.52 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.008 0.022 ? 2034 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 1338 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.498 2.009 ? 2763 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.476 3.000 ? 3278 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.465 5.000 ? 243 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 41.425 25.294 ? 85 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 9.785 15.000 ? 336 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.940 15.000 ? 9 'X-RAY DIFFRACTION' ? r_chiral_restr 0.121 0.200 ? 349 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 2149 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 367 'X-RAY DIFFRACTION' ? r_nbd_refined 0.212 0.200 ? 401 'X-RAY DIFFRACTION' ? r_nbd_other 0.176 0.200 ? 1364 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.171 0.200 ? 1013 'X-RAY DIFFRACTION' ? r_nbtor_other 0.085 0.200 ? 890 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.112 0.200 ? 160 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.209 0.200 ? 10 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.193 0.200 ? 50 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.155 0.200 ? 32 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.084 1.500 ? 1578 'X-RAY DIFFRACTION' ? r_mcbond_other 0.376 1.500 ? 488 'X-RAY DIFFRACTION' ? r_mcangle_it 1.345 2.000 ? 1985 'X-RAY DIFFRACTION' ? r_scbond_it 1.863 3.000 ? 929 'X-RAY DIFFRACTION' ? r_scangle_it 2.448 4.500 ? 778 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 1.074 3.000 ? 4070 'X-RAY DIFFRACTION' ? r_sphericity_free 2.944 3.000 ? 259 'X-RAY DIFFRACTION' ? r_sphericity_bonded 2.100 3.000 ? 3347 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.00 _refine_ls_shell.d_res_low 1.03 _refine_ls_shell.number_reflns_R_work 3303 _refine_ls_shell.R_factor_R_work 0.3130 _refine_ls_shell.percent_reflns_obs 35.88 _refine_ls_shell.R_factor_R_free 0.3040 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 174 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3BWH _struct.title 'Atomic resolution structure of cucurmosin, a novel type 1 RIP from the sarcocarp of Cucurbita moschata' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3BWH _struct_keywords.pdbx_keywords TRANSLATION _struct_keywords.text 'RIP fold, TRANSLATION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 7 ? ALA A 9 ? SER A 7 ALA A 9 5 ? 3 HELX_P HELX_P2 2 THR A 10 ? LEU A 25 ? THR A 10 LEU A 25 1 ? 16 HELX_P HELX_P3 3 MET A 42 ? ARG A 45 ? MET A 42 ARG A 45 5 ? 4 HELX_P HELX_P4 4 GLN A 89 ? LEU A 94 ? GLN A 89 LEU A 94 1 ? 6 HELX_P HELX_P5 5 ASN A 108 ? LYS A 117 ? ASN A 108 LYS A 117 1 ? 10 HELX_P HELX_P6 6 LEU A 119 ? ILE A 123 ? LEU A 119 ILE A 123 5 ? 5 HELX_P HELX_P7 7 GLY A 126 ? HIS A 139 ? GLY A 126 HIS A 139 1 ? 14 HELX_P HELX_P8 8 ALA A 144 ? THR A 156 ? ALA A 144 THR A 156 1 ? 13 HELX_P HELX_P9 9 THR A 156 ? PHE A 162 ? THR A 156 PHE A 162 1 ? 7 HELX_P HELX_P10 10 PHE A 162 ? ASN A 171 ? PHE A 162 ASN A 171 1 ? 10 HELX_P HELX_P11 11 SER A 180 ? ASN A 189 ? SER A 180 ASN A 189 1 ? 10 HELX_P HELX_P12 12 ASN A 189 ? LYS A 201 ? ASN A 189 LYS A 201 1 ? 13 HELX_P HELX_P13 13 SER A 228 ? GLN A 233 ? SER A 228 GLN A 233 1 ? 6 HELX_P HELX_P14 14 ASN A 240 ? THR A 244 ? ASN A 240 THR A 244 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? A ASN 225 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 225 B NAG 1 1_555 ? ? ? ? ? ? ? 1.578 ? N-Glycosylation covale2 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.454 ? ? covale3 covale both ? B NAG . O4 ? ? ? 1_555 B BMA . C1 ? ? B NAG 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale4 covale both ? B BMA . O2 ? ? ? 1_555 B XYP . C1 ? ? B BMA 3 B XYP 4 1_555 ? ? ? ? ? ? ? 1.435 ? ? covale5 covale both ? B BMA . O3 ? ? ? 1_555 B MAN . C1 ? ? B BMA 3 B MAN 5 1_555 ? ? ? ? ? ? ? 1.459 ? ? covale6 covale both ? B BMA . O6 ? ? ? 1_555 B MAN . C1 ? ? B BMA 3 B MAN 6 1_555 ? ? ? ? ? ? ? 1.416 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 2 ? ASP A 5 ? VAL A 2 ASP A 5 A 2 PHE A 47 ? VAL A 53 ? PHE A 47 VAL A 53 A 3 SER A 59 ? ASP A 65 ? SER A 59 ASP A 65 A 4 ILE A 71 ? SER A 75 ? ILE A 71 SER A 75 A 5 VAL A 79 ? PHE A 82 ? VAL A 79 PHE A 82 A 6 GLN A 99 ? THR A 102 ? GLN A 99 THR A 102 B 1 LYS A 27 ? VAL A 31 ? LYS A 27 VAL A 31 B 2 ILE A 34 ? LEU A 37 ? ILE A 34 LEU A 37 C 1 GLN A 206 ? ILE A 214 ? GLN A 206 ILE A 214 C 2 ARG A 220 ? ASN A 225 ? ARG A 220 ASN A 225 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 4 ? N PHE A 4 O ASP A 51 ? O ASP A 51 A 2 3 N ILE A 48 ? N ILE A 48 O ILE A 64 ? O ILE A 64 A 3 4 N ALA A 63 ? N ALA A 63 O ALA A 73 ? O ALA A 73 A 4 5 N TYR A 74 ? N TYR A 74 O TYR A 81 ? O TYR A 81 A 5 6 N SER A 80 ? N SER A 80 O ARG A 101 ? O ARG A 101 B 1 2 N ASP A 28 ? N ASP A 28 O VAL A 36 ? O VAL A 36 C 1 2 N VAL A 211 ? N VAL A 211 O ILE A 223 ? O ILE A 223 # _database_PDB_matrix.entry_id 3BWH _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3BWH _atom_sites.fract_transf_matrix[1][1] 0.023945 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017012 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010048 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 1 1 ASN ASN A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 ARG 3 3 3 ARG ARG A . n A 1 4 PHE 4 4 4 PHE PHE A . n A 1 5 ASP 5 5 5 ASP ASP A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 SER 13 13 13 SER SER A . n A 1 14 TYR 14 14 14 TYR TYR A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 PHE 17 17 17 PHE PHE A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 ASN 20 20 20 ASN ASN A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 ARG 22 22 22 ARG ARG A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 PRO 26 26 26 PRO PRO A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 TYR 32 32 32 TYR TYR A . n A 1 33 ASP 33 33 33 ASP ASP A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 PRO 35 35 35 PRO PRO A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 THR 40 40 40 THR THR A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 MET 42 42 42 MET MET A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 ARG 45 45 45 ARG ARG A . n A 1 46 ARG 46 46 46 ARG ARG A . n A 1 47 PHE 47 47 47 PHE PHE A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 VAL 53 53 53 VAL VAL A . n A 1 54 ASN 54 54 54 ASN ASN A . n A 1 55 TYR 55 55 55 TYR TYR A . n A 1 56 ASP 56 56 56 ASP ASP A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 ILE 60 60 60 ILE ILE A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 ASP 65 65 65 ASP ASP A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 ASN 68 68 68 ASN ASN A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 TYR 70 70 70 TYR TYR A . n A 1 71 ILE 71 71 71 ILE ILE A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 TYR 74 74 74 TYR TYR A . n A 1 75 SER 75 75 75 SER SER A . n A 1 76 THR 76 76 76 THR THR A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 SER 80 80 80 SER SER A . n A 1 81 TYR 81 81 81 TYR TYR A . n A 1 82 PHE 82 82 82 PHE PHE A . n A 1 83 PHE 83 83 83 PHE PHE A . n A 1 84 GLN 84 84 84 GLN GLN A . n A 1 85 GLN 85 85 85 GLN GLN A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 PRO 87 87 87 PRO PRO A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 GLN 89 89 89 GLN GLN A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 PRO 91 91 91 PRO PRO A . n A 1 92 LYS 92 92 92 LYS LYS A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 PHE 95 95 95 PHE PHE A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 GLY 97 97 97 GLY GLY A . n A 1 98 THR 98 98 98 THR THR A . n A 1 99 GLN 99 99 99 GLN GLN A . n A 1 100 GLN 100 100 100 GLN GLN A . n A 1 101 ARG 101 101 101 ARG ARG A . n A 1 102 THR 102 102 102 THR THR A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 PRO 104 104 104 PRO PRO A . n A 1 105 TYR 105 105 105 TYR TYR A . n A 1 106 THR 106 106 106 THR THR A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 ASN 108 108 108 ASN ASN A . n A 1 109 TYR 109 109 109 TYR TYR A . n A 1 110 GLU 110 110 110 GLU GLU A . n A 1 111 ASN 111 111 111 ASN ASN A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 GLN 113 113 113 GLN GLN A . n A 1 114 THR 114 114 114 THR THR A . n A 1 115 ALA 115 115 115 ALA ALA A . n A 1 116 ALA 116 116 116 ALA ALA A . n A 1 117 LYS 117 117 117 LYS LYS A . n A 1 118 LYS 118 118 118 LYS LYS A . n A 1 119 LEU 119 119 119 LEU LEU A . n A 1 120 ARG 120 120 120 ARG ARG A . n A 1 121 GLU 121 121 121 GLU GLU A . n A 1 122 ASN 122 122 122 ASN ASN A . n A 1 123 ILE 123 123 123 ILE ILE A . n A 1 124 GLU 124 124 124 GLU GLU A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 GLY 126 126 126 GLY GLY A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 PRO 128 128 128 PRO PRO A . n A 1 129 ALA 129 129 129 ALA ALA A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 ASP 131 131 131 ASP ASP A . n A 1 132 SER 132 132 132 SER SER A . n A 1 133 ALA 133 133 133 ALA ALA A . n A 1 134 ILE 134 134 134 ILE ILE A . n A 1 135 THR 135 135 135 THR THR A . n A 1 136 THR 136 136 136 THR THR A . n A 1 137 LEU 137 137 137 LEU LEU A . n A 1 138 PHE 138 138 138 PHE PHE A . n A 1 139 HIS 139 139 139 HIS HIS A . n A 1 140 TYR 140 140 140 TYR TYR A . n A 1 141 ASN 141 141 141 ASN ASN A . n A 1 142 ALA 142 142 142 ALA ALA A . n A 1 143 GLU 143 143 143 GLU GLU A . n A 1 144 ALA 144 144 144 ALA ALA A . n A 1 145 ALA 145 145 145 ALA ALA A . n A 1 146 ALA 146 146 146 ALA ALA A . n A 1 147 SER 147 147 147 SER SER A . n A 1 148 ALA 148 148 148 ALA ALA A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 LEU 150 150 150 LEU LEU A . n A 1 151 VAL 151 151 151 VAL VAL A . n A 1 152 LEU 152 152 152 LEU LEU A . n A 1 153 ILE 153 153 153 ILE ILE A . n A 1 154 GLN 154 154 154 GLN GLN A . n A 1 155 THR 155 155 155 THR THR A . n A 1 156 THR 156 156 156 THR THR A . n A 1 157 SER 157 157 157 SER SER A . n A 1 158 GLU 158 158 158 GLU GLU A . n A 1 159 ALA 159 159 159 ALA ALA A . n A 1 160 ALA 160 160 160 ALA ALA A . n A 1 161 ARG 161 161 161 ARG ARG A . n A 1 162 PHE 162 162 162 PHE PHE A . n A 1 163 ARG 163 163 163 ARG ARG A . n A 1 164 TYR 164 164 164 TYR TYR A . n A 1 165 ILE 165 165 165 ILE ILE A . n A 1 166 GLU 166 166 166 GLU GLU A . n A 1 167 LEU 167 167 167 LEU LEU A . n A 1 168 GLN 168 168 168 GLN GLN A . n A 1 169 ILE 169 169 169 ILE ILE A . n A 1 170 ALA 170 170 170 ALA ALA A . n A 1 171 ASN 171 171 171 ASN ASN A . n A 1 172 ASN 172 172 172 ASN ASN A . n A 1 173 VAL 173 173 173 VAL VAL A . n A 1 174 GLY 174 174 174 GLY GLY A . n A 1 175 THR 175 175 175 THR THR A . n A 1 176 LYS 176 176 176 LYS LYS A . n A 1 177 PHE 177 177 177 PHE PHE A . n A 1 178 LYS 178 178 178 LYS LYS A . n A 1 179 PRO 179 179 179 PRO PRO A . n A 1 180 SER 180 180 180 SER SER A . n A 1 181 GLN 181 181 181 GLN GLN A . n A 1 182 THR 182 182 182 THR THR A . n A 1 183 ILE 183 183 183 ILE ILE A . n A 1 184 ILE 184 184 184 ILE ILE A . n A 1 185 SER 185 185 185 SER SER A . n A 1 186 LEU 186 186 186 LEU LEU A . n A 1 187 GLU 187 187 187 GLU GLU A . n A 1 188 ASN 188 188 188 ASN ASN A . n A 1 189 ASN 189 189 189 ASN ASN A . n A 1 190 TRP 190 190 190 TRP TRP A . n A 1 191 SER 191 191 191 SER SER A . n A 1 192 ALA 192 192 192 ALA ALA A . n A 1 193 LEU 193 193 193 LEU LEU A . n A 1 194 SER 194 194 194 SER SER A . n A 1 195 LYS 195 195 195 LYS LYS A . n A 1 196 GLN 196 196 196 GLN GLN A . n A 1 197 ILE 197 197 197 ILE ILE A . n A 1 198 GLN 198 198 198 GLN GLN A . n A 1 199 ILE 199 199 199 ILE ILE A . n A 1 200 ALA 200 200 200 ALA ALA A . n A 1 201 LYS 201 201 201 LYS LYS A . n A 1 202 ASN 202 202 202 ASN ASN A . n A 1 203 LYS 203 203 203 LYS LYS A . n A 1 204 ASN 204 204 204 ASN ASN A . n A 1 205 GLY 205 205 205 GLY GLY A . n A 1 206 GLN 206 206 206 GLN GLN A . n A 1 207 PHE 207 207 207 PHE PHE A . n A 1 208 GLU 208 208 208 GLU GLU A . n A 1 209 THR 209 209 209 THR THR A . n A 1 210 PRO 210 210 210 PRO PRO A . n A 1 211 VAL 211 211 211 VAL VAL A . n A 1 212 ILE 212 212 212 ILE ILE A . n A 1 213 LEU 213 213 213 LEU LEU A . n A 1 214 ILE 214 214 214 ILE ILE A . n A 1 215 ASP 215 215 215 ASP ASP A . n A 1 216 PRO 216 216 216 PRO PRO A . n A 1 217 GLN 217 217 217 GLN GLN A . n A 1 218 GLY 218 218 218 GLY GLY A . n A 1 219 ASN 219 219 219 ASN ASN A . n A 1 220 ARG 220 220 220 ARG ARG A . n A 1 221 VAL 221 221 221 VAL VAL A . n A 1 222 GLN 222 222 222 GLN GLN A . n A 1 223 ILE 223 223 223 ILE ILE A . n A 1 224 THR 224 224 224 THR THR A . n A 1 225 ASN 225 225 225 ASN ASN A . n A 1 226 VAL 226 226 226 VAL VAL A . n A 1 227 THR 227 227 227 THR THR A . n A 1 228 SER 228 228 228 SER SER A . n A 1 229 ASN 229 229 229 ASN ASN A . n A 1 230 VAL 230 230 230 VAL VAL A . n A 1 231 VAL 231 231 231 VAL VAL A . n A 1 232 THR 232 232 232 THR THR A . n A 1 233 GLN 233 233 233 GLN GLN A . n A 1 234 ASN 234 234 234 ASN ASN A . n A 1 235 ILE 235 235 235 ILE ILE A . n A 1 236 GLN 236 236 236 GLN GLN A . n A 1 237 LEU 237 237 237 LEU LEU A . n A 1 238 LEU 238 238 238 LEU LEU A . n A 1 239 LEU 239 239 239 LEU LEU A . n A 1 240 ASN 240 240 240 ASN ASN A . n A 1 241 ILE 241 241 241 ILE ILE A . n A 1 242 GLY 242 242 242 GLY GLY A . n A 1 243 ALA 243 243 243 ALA ALA A . n A 1 244 THR 244 244 244 THR THR A . n A 1 245 ALA 245 245 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PO4 1 252 252 PO4 PO4 A . D 4 EDO 1 253 253 EDO EDO A . E 4 EDO 1 254 254 EDO EDO A . F 4 EDO 1 255 255 EDO EDO A . G 4 EDO 1 256 256 EDO EDO A . H 4 EDO 1 257 257 EDO EDO A . I 5 HOH 1 258 258 HOH HOH A . I 5 HOH 2 259 259 HOH HOH A . I 5 HOH 3 260 260 HOH HOH A . I 5 HOH 4 261 261 HOH HOH A . I 5 HOH 5 262 262 HOH HOH A . I 5 HOH 6 263 263 HOH HOH A . I 5 HOH 7 264 264 HOH HOH A . I 5 HOH 8 265 265 HOH HOH A . I 5 HOH 9 266 266 HOH HOH A . I 5 HOH 10 267 267 HOH HOH A . I 5 HOH 11 268 268 HOH HOH A . I 5 HOH 12 269 269 HOH HOH A . I 5 HOH 13 270 270 HOH HOH A . I 5 HOH 14 271 271 HOH HOH A . I 5 HOH 15 272 272 HOH HOH A . I 5 HOH 16 273 273 HOH HOH A . I 5 HOH 17 274 274 HOH HOH A . I 5 HOH 18 275 275 HOH HOH A . I 5 HOH 19 276 276 HOH HOH A . I 5 HOH 20 277 277 HOH HOH A . I 5 HOH 21 278 278 HOH HOH A . I 5 HOH 22 279 279 HOH HOH A . I 5 HOH 23 280 280 HOH HOH A . I 5 HOH 24 281 281 HOH HOH A . I 5 HOH 25 282 282 HOH HOH A . I 5 HOH 26 283 283 HOH HOH A . I 5 HOH 27 284 284 HOH HOH A . I 5 HOH 28 285 285 HOH HOH A . I 5 HOH 29 286 286 HOH HOH A . I 5 HOH 30 287 287 HOH HOH A . I 5 HOH 31 288 288 HOH HOH A . I 5 HOH 32 289 289 HOH HOH A . I 5 HOH 33 290 290 HOH HOH A . I 5 HOH 34 291 291 HOH HOH A . I 5 HOH 35 292 292 HOH HOH A . I 5 HOH 36 293 293 HOH HOH A . I 5 HOH 37 294 294 HOH HOH A . I 5 HOH 38 295 295 HOH HOH A . I 5 HOH 39 296 296 HOH HOH A . I 5 HOH 40 297 297 HOH HOH A . I 5 HOH 41 298 298 HOH HOH A . I 5 HOH 42 299 299 HOH HOH A . I 5 HOH 43 300 300 HOH HOH A . I 5 HOH 44 301 301 HOH HOH A . I 5 HOH 45 302 302 HOH HOH A . I 5 HOH 46 303 303 HOH HOH A . I 5 HOH 47 304 304 HOH HOH A . I 5 HOH 48 305 305 HOH HOH A . I 5 HOH 49 306 306 HOH HOH A . I 5 HOH 50 307 307 HOH HOH A . I 5 HOH 51 308 308 HOH HOH A . I 5 HOH 52 309 309 HOH HOH A . I 5 HOH 53 310 310 HOH HOH A . I 5 HOH 54 311 311 HOH HOH A . I 5 HOH 55 312 312 HOH HOH A . I 5 HOH 56 313 313 HOH HOH A . I 5 HOH 57 314 314 HOH HOH A . I 5 HOH 58 315 315 HOH HOH A . I 5 HOH 59 316 316 HOH HOH A . I 5 HOH 60 317 317 HOH HOH A . I 5 HOH 61 318 318 HOH HOH A . I 5 HOH 62 319 319 HOH HOH A . I 5 HOH 63 320 320 HOH HOH A . I 5 HOH 64 321 321 HOH HOH A . I 5 HOH 65 322 322 HOH HOH A . I 5 HOH 66 323 323 HOH HOH A . I 5 HOH 67 324 324 HOH HOH A . I 5 HOH 68 325 325 HOH HOH A . I 5 HOH 69 326 326 HOH HOH A . I 5 HOH 70 327 327 HOH HOH A . I 5 HOH 71 328 328 HOH HOH A . I 5 HOH 72 329 329 HOH HOH A . I 5 HOH 73 330 330 HOH HOH A . I 5 HOH 74 331 331 HOH HOH A . I 5 HOH 75 332 332 HOH HOH A . I 5 HOH 76 333 333 HOH HOH A . I 5 HOH 77 334 334 HOH HOH A . I 5 HOH 78 335 335 HOH HOH A . I 5 HOH 79 336 336 HOH HOH A . I 5 HOH 80 337 337 HOH HOH A . I 5 HOH 81 338 338 HOH HOH A . I 5 HOH 82 339 339 HOH HOH A . I 5 HOH 83 340 340 HOH HOH A . I 5 HOH 84 341 341 HOH HOH A . I 5 HOH 85 342 342 HOH HOH A . I 5 HOH 86 343 343 HOH HOH A . I 5 HOH 87 344 344 HOH HOH A . I 5 HOH 88 345 345 HOH HOH A . I 5 HOH 89 346 346 HOH HOH A . I 5 HOH 90 347 347 HOH HOH A . I 5 HOH 91 348 348 HOH HOH A . I 5 HOH 92 349 349 HOH HOH A . I 5 HOH 93 350 350 HOH HOH A . I 5 HOH 94 351 351 HOH HOH A . I 5 HOH 95 352 352 HOH HOH A . I 5 HOH 96 353 353 HOH HOH A . I 5 HOH 97 354 354 HOH HOH A . I 5 HOH 98 355 355 HOH HOH A . I 5 HOH 99 356 356 HOH HOH A . I 5 HOH 100 357 357 HOH HOH A . I 5 HOH 101 358 358 HOH HOH A . I 5 HOH 102 359 359 HOH HOH A . I 5 HOH 103 360 360 HOH HOH A . I 5 HOH 104 361 361 HOH HOH A . I 5 HOH 105 362 362 HOH HOH A . I 5 HOH 106 363 363 HOH HOH A . I 5 HOH 107 364 364 HOH HOH A . I 5 HOH 108 365 365 HOH HOH A . I 5 HOH 109 366 366 HOH HOH A . I 5 HOH 110 367 367 HOH HOH A . I 5 HOH 111 368 368 HOH HOH A . I 5 HOH 112 369 369 HOH HOH A . I 5 HOH 113 370 370 HOH HOH A . I 5 HOH 114 371 371 HOH HOH A . I 5 HOH 115 372 372 HOH HOH A . I 5 HOH 116 373 373 HOH HOH A . I 5 HOH 117 374 374 HOH HOH A . I 5 HOH 118 375 375 HOH HOH A . I 5 HOH 119 376 376 HOH HOH A . I 5 HOH 120 377 377 HOH HOH A . I 5 HOH 121 378 378 HOH HOH A . I 5 HOH 122 379 379 HOH HOH A . I 5 HOH 123 380 380 HOH HOH A . I 5 HOH 124 381 381 HOH HOH A . I 5 HOH 125 382 382 HOH HOH A . I 5 HOH 126 383 383 HOH HOH A . I 5 HOH 127 384 384 HOH HOH A . I 5 HOH 128 385 385 HOH HOH A . I 5 HOH 129 386 386 HOH HOH A . I 5 HOH 130 387 387 HOH HOH A . I 5 HOH 131 388 388 HOH HOH A . I 5 HOH 132 389 389 HOH HOH A . I 5 HOH 133 390 390 HOH HOH A . I 5 HOH 134 391 391 HOH HOH A . I 5 HOH 135 392 392 HOH HOH A . I 5 HOH 136 394 394 HOH HOH A . I 5 HOH 137 395 395 HOH HOH A . I 5 HOH 138 396 396 HOH HOH A . I 5 HOH 139 397 397 HOH HOH A . I 5 HOH 140 398 398 HOH HOH A . I 5 HOH 141 399 399 HOH HOH A . I 5 HOH 142 400 400 HOH HOH A . I 5 HOH 143 401 401 HOH HOH A . I 5 HOH 144 402 402 HOH HOH A . I 5 HOH 145 403 403 HOH HOH A . I 5 HOH 146 404 404 HOH HOH A . I 5 HOH 147 405 405 HOH HOH A . I 5 HOH 148 406 406 HOH HOH A . I 5 HOH 149 407 407 HOH HOH A . I 5 HOH 150 408 408 HOH HOH A . I 5 HOH 151 409 409 HOH HOH A . I 5 HOH 152 410 410 HOH HOH A . I 5 HOH 153 411 411 HOH HOH A . I 5 HOH 154 412 412 HOH HOH A . I 5 HOH 155 413 413 HOH HOH A . I 5 HOH 156 414 414 HOH HOH A . I 5 HOH 157 415 415 HOH HOH A . I 5 HOH 158 416 416 HOH HOH A . I 5 HOH 159 417 417 HOH HOH A . I 5 HOH 160 418 418 HOH HOH A . I 5 HOH 161 419 419 HOH HOH A . I 5 HOH 162 420 420 HOH HOH A . I 5 HOH 163 421 421 HOH HOH A . I 5 HOH 164 422 422 HOH HOH A . I 5 HOH 165 423 423 HOH HOH A . I 5 HOH 166 424 424 HOH HOH A . I 5 HOH 167 425 425 HOH HOH A . I 5 HOH 168 426 426 HOH HOH A . I 5 HOH 169 427 427 HOH HOH A . I 5 HOH 170 428 428 HOH HOH A . I 5 HOH 171 429 429 HOH HOH A . I 5 HOH 172 430 430 HOH HOH A . I 5 HOH 173 431 431 HOH HOH A . I 5 HOH 174 432 432 HOH HOH A . I 5 HOH 175 433 433 HOH HOH A . I 5 HOH 176 434 434 HOH HOH A . I 5 HOH 177 435 435 HOH HOH A . I 5 HOH 178 436 436 HOH HOH A . I 5 HOH 179 437 437 HOH HOH A . I 5 HOH 180 438 438 HOH HOH A . I 5 HOH 181 439 439 HOH HOH A . I 5 HOH 182 440 440 HOH HOH A . I 5 HOH 183 441 441 HOH HOH A . I 5 HOH 184 442 442 HOH HOH A . I 5 HOH 185 443 443 HOH HOH A . I 5 HOH 186 444 444 HOH HOH A . I 5 HOH 187 445 445 HOH HOH A . I 5 HOH 188 446 446 HOH HOH A . I 5 HOH 189 447 447 HOH HOH A . I 5 HOH 190 448 448 HOH HOH A . I 5 HOH 191 449 449 HOH HOH A . I 5 HOH 192 450 450 HOH HOH A . I 5 HOH 193 451 451 HOH HOH A . I 5 HOH 194 452 452 HOH HOH A . I 5 HOH 195 453 453 HOH HOH A . I 5 HOH 196 454 454 HOH HOH A . I 5 HOH 197 455 455 HOH HOH A . I 5 HOH 198 456 456 HOH HOH A . I 5 HOH 199 457 457 HOH HOH A . I 5 HOH 200 458 458 HOH HOH A . I 5 HOH 201 459 459 HOH HOH A . I 5 HOH 202 460 460 HOH HOH A . I 5 HOH 203 461 461 HOH HOH A . I 5 HOH 204 462 462 HOH HOH A . I 5 HOH 205 463 463 HOH HOH A . I 5 HOH 206 464 464 HOH HOH A . I 5 HOH 207 465 465 HOH HOH A . I 5 HOH 208 466 466 HOH HOH A . I 5 HOH 209 467 467 HOH HOH A . I 5 HOH 210 468 468 HOH HOH A . I 5 HOH 211 469 469 HOH HOH A . I 5 HOH 212 470 470 HOH HOH A . I 5 HOH 213 471 471 HOH HOH A . I 5 HOH 214 472 472 HOH HOH A . I 5 HOH 215 473 473 HOH HOH A . I 5 HOH 216 474 474 HOH HOH A . I 5 HOH 217 475 475 HOH HOH A . I 5 HOH 218 476 476 HOH HOH A . I 5 HOH 219 477 477 HOH HOH A . I 5 HOH 220 478 478 HOH HOH A . I 5 HOH 221 479 479 HOH HOH A . I 5 HOH 222 480 480 HOH HOH A . I 5 HOH 223 481 481 HOH HOH A . I 5 HOH 224 482 482 HOH HOH A . I 5 HOH 225 483 483 HOH HOH A . I 5 HOH 226 484 484 HOH HOH A . I 5 HOH 227 485 485 HOH HOH A . I 5 HOH 228 486 486 HOH HOH A . I 5 HOH 229 488 488 HOH HOH A . I 5 HOH 230 489 489 HOH HOH A . I 5 HOH 231 490 490 HOH HOH A . I 5 HOH 232 491 491 HOH HOH A . I 5 HOH 233 492 492 HOH HOH A . I 5 HOH 234 493 493 HOH HOH A . I 5 HOH 235 494 494 HOH HOH A . I 5 HOH 236 495 495 HOH HOH A . I 5 HOH 237 496 496 HOH HOH A . I 5 HOH 238 497 497 HOH HOH A . I 5 HOH 239 498 498 HOH HOH A . I 5 HOH 240 499 499 HOH HOH A . I 5 HOH 241 500 500 HOH HOH A . I 5 HOH 242 501 501 HOH HOH A . I 5 HOH 243 502 502 HOH HOH A . I 5 HOH 244 503 503 HOH HOH A . I 5 HOH 245 504 504 HOH HOH A . I 5 HOH 246 506 506 HOH HOH A . I 5 HOH 247 507 507 HOH HOH A . I 5 HOH 248 508 508 HOH HOH A . I 5 HOH 249 509 509 HOH HOH A . I 5 HOH 250 510 510 HOH HOH A . I 5 HOH 251 511 511 HOH HOH A . I 5 HOH 252 512 512 HOH HOH A . I 5 HOH 253 513 513 HOH HOH A . I 5 HOH 254 514 514 HOH HOH A . I 5 HOH 255 515 515 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id ASN _pdbx_struct_mod_residue.label_seq_id 225 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id ASN _pdbx_struct_mod_residue.auth_seq_id 225 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id ASN _pdbx_struct_mod_residue.details 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-10-07 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2020-10-21 5 'Structure model' 2 2 2023-08-30 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Non-polymer description' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' Advisory 4 3 'Structure model' 'Atomic model' 5 3 'Structure model' 'Data collection' 6 3 'Structure model' 'Derived calculations' 7 3 'Structure model' 'Structure summary' 8 4 'Structure model' 'Source and taxonomy' 9 4 'Structure model' 'Structure summary' 10 5 'Structure model' 'Data collection' 11 5 'Structure model' 'Database references' 12 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' atom_site_anisotrop 3 3 'Structure model' chem_comp 4 3 'Structure model' entity 5 3 'Structure model' pdbx_branch_scheme 6 3 'Structure model' pdbx_chem_comp_identifier 7 3 'Structure model' pdbx_entity_branch 8 3 'Structure model' pdbx_entity_branch_descriptor 9 3 'Structure model' pdbx_entity_branch_link 10 3 'Structure model' pdbx_entity_branch_list 11 3 'Structure model' pdbx_entity_nonpoly 12 3 'Structure model' pdbx_nonpoly_scheme 13 3 'Structure model' pdbx_struct_assembly_gen 14 3 'Structure model' pdbx_unobs_or_zero_occ_atoms 15 3 'Structure model' pdbx_validate_chiral 16 3 'Structure model' struct_asym 17 3 'Structure model' struct_conn 18 3 'Structure model' struct_site 19 3 'Structure model' struct_site_gen 20 4 'Structure model' chem_comp 21 4 'Structure model' entity_src_nat 22 5 'Structure model' chem_comp_atom 23 5 'Structure model' chem_comp_bond 24 5 'Structure model' database_2 25 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.B_iso_or_equiv' 2 3 'Structure model' '_atom_site.Cartn_x' 3 3 'Structure model' '_atom_site.Cartn_y' 4 3 'Structure model' '_atom_site.Cartn_z' 5 3 'Structure model' '_atom_site.auth_asym_id' 6 3 'Structure model' '_atom_site.auth_atom_id' 7 3 'Structure model' '_atom_site.auth_comp_id' 8 3 'Structure model' '_atom_site.auth_seq_id' 9 3 'Structure model' '_atom_site.label_asym_id' 10 3 'Structure model' '_atom_site.label_atom_id' 11 3 'Structure model' '_atom_site.label_comp_id' 12 3 'Structure model' '_atom_site.label_entity_id' 13 3 'Structure model' '_atom_site.type_symbol' 14 3 'Structure model' '_atom_site_anisotrop.U[1][1]' 15 3 'Structure model' '_atom_site_anisotrop.U[1][2]' 16 3 'Structure model' '_atom_site_anisotrop.U[1][3]' 17 3 'Structure model' '_atom_site_anisotrop.U[2][2]' 18 3 'Structure model' '_atom_site_anisotrop.U[2][3]' 19 3 'Structure model' '_atom_site_anisotrop.U[3][3]' 20 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 21 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 22 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id' 23 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 24 3 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 25 3 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 26 3 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id' 27 3 'Structure model' '_atom_site_anisotrop.type_symbol' 28 3 'Structure model' '_chem_comp.name' 29 3 'Structure model' '_chem_comp.type' 30 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 31 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 32 3 'Structure model' '_struct_conn.pdbx_role' 33 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 34 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 35 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 36 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 37 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 38 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 39 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 40 4 'Structure model' '_chem_comp.pdbx_synonyms' 41 4 'Structure model' '_entity_src_nat.pdbx_ncbi_taxonomy_id' 42 5 'Structure model' '_database_2.pdbx_DOI' 43 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 HKL-2000 'data reduction' . ? 2 HKL-2000 'data scaling' . ? 3 AMoRE phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 104 ? ? -79.37 30.27 2 1 HIS A 139 ? ? -105.04 63.01 3 1 THR A 156 ? ? -117.80 -77.95 4 1 LYS A 203 ? ? -140.84 34.38 5 1 GLN A 233 ? ? -150.75 40.15 6 1 ASN A 234 ? ? -145.23 -69.66 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id ALA _pdbx_unobs_or_zero_occ_residues.auth_seq_id 245 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id ALA _pdbx_unobs_or_zero_occ_residues.label_seq_id 245 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 EDO C1 C N N 98 EDO O1 O N N 99 EDO C2 C N N 100 EDO O2 O N N 101 EDO H11 H N N 102 EDO H12 H N N 103 EDO HO1 H N N 104 EDO H21 H N N 105 EDO H22 H N N 106 EDO HO2 H N N 107 GLN N N N N 108 GLN CA C N S 109 GLN C C N N 110 GLN O O N N 111 GLN CB C N N 112 GLN CG C N N 113 GLN CD C N N 114 GLN OE1 O N N 115 GLN NE2 N N N 116 GLN OXT O N N 117 GLN H H N N 118 GLN H2 H N N 119 GLN HA H N N 120 GLN HB2 H N N 121 GLN HB3 H N N 122 GLN HG2 H N N 123 GLN HG3 H N N 124 GLN HE21 H N N 125 GLN HE22 H N N 126 GLN HXT H N N 127 GLU N N N N 128 GLU CA C N S 129 GLU C C N N 130 GLU O O N N 131 GLU CB C N N 132 GLU CG C N N 133 GLU CD C N N 134 GLU OE1 O N N 135 GLU OE2 O N N 136 GLU OXT O N N 137 GLU H H N N 138 GLU H2 H N N 139 GLU HA H N N 140 GLU HB2 H N N 141 GLU HB3 H N N 142 GLU HG2 H N N 143 GLU HG3 H N N 144 GLU HE2 H N N 145 GLU HXT H N N 146 GLY N N N N 147 GLY CA C N N 148 GLY C C N N 149 GLY O O N N 150 GLY OXT O N N 151 GLY H H N N 152 GLY H2 H N N 153 GLY HA2 H N N 154 GLY HA3 H N N 155 GLY HXT H N N 156 HIS N N N N 157 HIS CA C N S 158 HIS C C N N 159 HIS O O N N 160 HIS CB C N N 161 HIS CG C Y N 162 HIS ND1 N Y N 163 HIS CD2 C Y N 164 HIS CE1 C Y N 165 HIS NE2 N Y N 166 HIS OXT O N N 167 HIS H H N N 168 HIS H2 H N N 169 HIS HA H N N 170 HIS HB2 H N N 171 HIS HB3 H N N 172 HIS HD1 H N N 173 HIS HD2 H N N 174 HIS HE1 H N N 175 HIS HE2 H N N 176 HIS HXT H N N 177 HOH O O N N 178 HOH H1 H N N 179 HOH H2 H N N 180 ILE N N N N 181 ILE CA C N S 182 ILE C C N N 183 ILE O O N N 184 ILE CB C N S 185 ILE CG1 C N N 186 ILE CG2 C N N 187 ILE CD1 C N N 188 ILE OXT O N N 189 ILE H H N N 190 ILE H2 H N N 191 ILE HA H N N 192 ILE HB H N N 193 ILE HG12 H N N 194 ILE HG13 H N N 195 ILE HG21 H N N 196 ILE HG22 H N N 197 ILE HG23 H N N 198 ILE HD11 H N N 199 ILE HD12 H N N 200 ILE HD13 H N N 201 ILE HXT H N N 202 LEU N N N N 203 LEU CA C N S 204 LEU C C N N 205 LEU O O N N 206 LEU CB C N N 207 LEU CG C N N 208 LEU CD1 C N N 209 LEU CD2 C N N 210 LEU OXT O N N 211 LEU H H N N 212 LEU H2 H N N 213 LEU HA H N N 214 LEU HB2 H N N 215 LEU HB3 H N N 216 LEU HG H N N 217 LEU HD11 H N N 218 LEU HD12 H N N 219 LEU HD13 H N N 220 LEU HD21 H N N 221 LEU HD22 H N N 222 LEU HD23 H N N 223 LEU HXT H N N 224 LYS N N N N 225 LYS CA C N S 226 LYS C C N N 227 LYS O O N N 228 LYS CB C N N 229 LYS CG C N N 230 LYS CD C N N 231 LYS CE C N N 232 LYS NZ N N N 233 LYS OXT O N N 234 LYS H H N N 235 LYS H2 H N N 236 LYS HA H N N 237 LYS HB2 H N N 238 LYS HB3 H N N 239 LYS HG2 H N N 240 LYS HG3 H N N 241 LYS HD2 H N N 242 LYS HD3 H N N 243 LYS HE2 H N N 244 LYS HE3 H N N 245 LYS HZ1 H N N 246 LYS HZ2 H N N 247 LYS HZ3 H N N 248 LYS HXT H N N 249 MAN C1 C N S 250 MAN C2 C N S 251 MAN C3 C N S 252 MAN C4 C N S 253 MAN C5 C N R 254 MAN C6 C N N 255 MAN O1 O N N 256 MAN O2 O N N 257 MAN O3 O N N 258 MAN O4 O N N 259 MAN O5 O N N 260 MAN O6 O N N 261 MAN H1 H N N 262 MAN H2 H N N 263 MAN H3 H N N 264 MAN H4 H N N 265 MAN H5 H N N 266 MAN H61 H N N 267 MAN H62 H N N 268 MAN HO1 H N N 269 MAN HO2 H N N 270 MAN HO3 H N N 271 MAN HO4 H N N 272 MAN HO6 H N N 273 MET N N N N 274 MET CA C N S 275 MET C C N N 276 MET O O N N 277 MET CB C N N 278 MET CG C N N 279 MET SD S N N 280 MET CE C N N 281 MET OXT O N N 282 MET H H N N 283 MET H2 H N N 284 MET HA H N N 285 MET HB2 H N N 286 MET HB3 H N N 287 MET HG2 H N N 288 MET HG3 H N N 289 MET HE1 H N N 290 MET HE2 H N N 291 MET HE3 H N N 292 MET HXT H N N 293 NAG C1 C N R 294 NAG C2 C N R 295 NAG C3 C N R 296 NAG C4 C N S 297 NAG C5 C N R 298 NAG C6 C N N 299 NAG C7 C N N 300 NAG C8 C N N 301 NAG N2 N N N 302 NAG O1 O N N 303 NAG O3 O N N 304 NAG O4 O N N 305 NAG O5 O N N 306 NAG O6 O N N 307 NAG O7 O N N 308 NAG H1 H N N 309 NAG H2 H N N 310 NAG H3 H N N 311 NAG H4 H N N 312 NAG H5 H N N 313 NAG H61 H N N 314 NAG H62 H N N 315 NAG H81 H N N 316 NAG H82 H N N 317 NAG H83 H N N 318 NAG HN2 H N N 319 NAG HO1 H N N 320 NAG HO3 H N N 321 NAG HO4 H N N 322 NAG HO6 H N N 323 PHE N N N N 324 PHE CA C N S 325 PHE C C N N 326 PHE O O N N 327 PHE CB C N N 328 PHE CG C Y N 329 PHE CD1 C Y N 330 PHE CD2 C Y N 331 PHE CE1 C Y N 332 PHE CE2 C Y N 333 PHE CZ C Y N 334 PHE OXT O N N 335 PHE H H N N 336 PHE H2 H N N 337 PHE HA H N N 338 PHE HB2 H N N 339 PHE HB3 H N N 340 PHE HD1 H N N 341 PHE HD2 H N N 342 PHE HE1 H N N 343 PHE HE2 H N N 344 PHE HZ H N N 345 PHE HXT H N N 346 PO4 P P N N 347 PO4 O1 O N N 348 PO4 O2 O N N 349 PO4 O3 O N N 350 PO4 O4 O N N 351 PRO N N N N 352 PRO CA C N S 353 PRO C C N N 354 PRO O O N N 355 PRO CB C N N 356 PRO CG C N N 357 PRO CD C N N 358 PRO OXT O N N 359 PRO H H N N 360 PRO HA H N N 361 PRO HB2 H N N 362 PRO HB3 H N N 363 PRO HG2 H N N 364 PRO HG3 H N N 365 PRO HD2 H N N 366 PRO HD3 H N N 367 PRO HXT H N N 368 SER N N N N 369 SER CA C N S 370 SER C C N N 371 SER O O N N 372 SER CB C N N 373 SER OG O N N 374 SER OXT O N N 375 SER H H N N 376 SER H2 H N N 377 SER HA H N N 378 SER HB2 H N N 379 SER HB3 H N N 380 SER HG H N N 381 SER HXT H N N 382 THR N N N N 383 THR CA C N S 384 THR C C N N 385 THR O O N N 386 THR CB C N R 387 THR OG1 O N N 388 THR CG2 C N N 389 THR OXT O N N 390 THR H H N N 391 THR H2 H N N 392 THR HA H N N 393 THR HB H N N 394 THR HG1 H N N 395 THR HG21 H N N 396 THR HG22 H N N 397 THR HG23 H N N 398 THR HXT H N N 399 TRP N N N N 400 TRP CA C N S 401 TRP C C N N 402 TRP O O N N 403 TRP CB C N N 404 TRP CG C Y N 405 TRP CD1 C Y N 406 TRP CD2 C Y N 407 TRP NE1 N Y N 408 TRP CE2 C Y N 409 TRP CE3 C Y N 410 TRP CZ2 C Y N 411 TRP CZ3 C Y N 412 TRP CH2 C Y N 413 TRP OXT O N N 414 TRP H H N N 415 TRP H2 H N N 416 TRP HA H N N 417 TRP HB2 H N N 418 TRP HB3 H N N 419 TRP HD1 H N N 420 TRP HE1 H N N 421 TRP HE3 H N N 422 TRP HZ2 H N N 423 TRP HZ3 H N N 424 TRP HH2 H N N 425 TRP HXT H N N 426 TYR N N N N 427 TYR CA C N S 428 TYR C C N N 429 TYR O O N N 430 TYR CB C N N 431 TYR CG C Y N 432 TYR CD1 C Y N 433 TYR CD2 C Y N 434 TYR CE1 C Y N 435 TYR CE2 C Y N 436 TYR CZ C Y N 437 TYR OH O N N 438 TYR OXT O N N 439 TYR H H N N 440 TYR H2 H N N 441 TYR HA H N N 442 TYR HB2 H N N 443 TYR HB3 H N N 444 TYR HD1 H N N 445 TYR HD2 H N N 446 TYR HE1 H N N 447 TYR HE2 H N N 448 TYR HH H N N 449 TYR HXT H N N 450 VAL N N N N 451 VAL CA C N S 452 VAL C C N N 453 VAL O O N N 454 VAL CB C N N 455 VAL CG1 C N N 456 VAL CG2 C N N 457 VAL OXT O N N 458 VAL H H N N 459 VAL H2 H N N 460 VAL HA H N N 461 VAL HB H N N 462 VAL HG11 H N N 463 VAL HG12 H N N 464 VAL HG13 H N N 465 VAL HG21 H N N 466 VAL HG22 H N N 467 VAL HG23 H N N 468 VAL HXT H N N 469 XYP O1 O N N 470 XYP C1 C N R 471 XYP C2 C N R 472 XYP C3 C N S 473 XYP C4 C N R 474 XYP C5 C N N 475 XYP O2 O N N 476 XYP O3 O N N 477 XYP O4 O N N 478 XYP O5 O N N 479 XYP HO1 H N N 480 XYP H1 H N N 481 XYP H2 H N N 482 XYP H3 H N N 483 XYP H4 H N N 484 XYP H51 H N N 485 XYP H52 H N N 486 XYP HO2 H N N 487 XYP HO3 H N N 488 XYP HO4 H N N 489 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 EDO C1 O1 sing N N 94 EDO C1 C2 sing N N 95 EDO C1 H11 sing N N 96 EDO C1 H12 sing N N 97 EDO O1 HO1 sing N N 98 EDO C2 O2 sing N N 99 EDO C2 H21 sing N N 100 EDO C2 H22 sing N N 101 EDO O2 HO2 sing N N 102 GLN N CA sing N N 103 GLN N H sing N N 104 GLN N H2 sing N N 105 GLN CA C sing N N 106 GLN CA CB sing N N 107 GLN CA HA sing N N 108 GLN C O doub N N 109 GLN C OXT sing N N 110 GLN CB CG sing N N 111 GLN CB HB2 sing N N 112 GLN CB HB3 sing N N 113 GLN CG CD sing N N 114 GLN CG HG2 sing N N 115 GLN CG HG3 sing N N 116 GLN CD OE1 doub N N 117 GLN CD NE2 sing N N 118 GLN NE2 HE21 sing N N 119 GLN NE2 HE22 sing N N 120 GLN OXT HXT sing N N 121 GLU N CA sing N N 122 GLU N H sing N N 123 GLU N H2 sing N N 124 GLU CA C sing N N 125 GLU CA CB sing N N 126 GLU CA HA sing N N 127 GLU C O doub N N 128 GLU C OXT sing N N 129 GLU CB CG sing N N 130 GLU CB HB2 sing N N 131 GLU CB HB3 sing N N 132 GLU CG CD sing N N 133 GLU CG HG2 sing N N 134 GLU CG HG3 sing N N 135 GLU CD OE1 doub N N 136 GLU CD OE2 sing N N 137 GLU OE2 HE2 sing N N 138 GLU OXT HXT sing N N 139 GLY N CA sing N N 140 GLY N H sing N N 141 GLY N H2 sing N N 142 GLY CA C sing N N 143 GLY CA HA2 sing N N 144 GLY CA HA3 sing N N 145 GLY C O doub N N 146 GLY C OXT sing N N 147 GLY OXT HXT sing N N 148 HIS N CA sing N N 149 HIS N H sing N N 150 HIS N H2 sing N N 151 HIS CA C sing N N 152 HIS CA CB sing N N 153 HIS CA HA sing N N 154 HIS C O doub N N 155 HIS C OXT sing N N 156 HIS CB CG sing N N 157 HIS CB HB2 sing N N 158 HIS CB HB3 sing N N 159 HIS CG ND1 sing Y N 160 HIS CG CD2 doub Y N 161 HIS ND1 CE1 doub Y N 162 HIS ND1 HD1 sing N N 163 HIS CD2 NE2 sing Y N 164 HIS CD2 HD2 sing N N 165 HIS CE1 NE2 sing Y N 166 HIS CE1 HE1 sing N N 167 HIS NE2 HE2 sing N N 168 HIS OXT HXT sing N N 169 HOH O H1 sing N N 170 HOH O H2 sing N N 171 ILE N CA sing N N 172 ILE N H sing N N 173 ILE N H2 sing N N 174 ILE CA C sing N N 175 ILE CA CB sing N N 176 ILE CA HA sing N N 177 ILE C O doub N N 178 ILE C OXT sing N N 179 ILE CB CG1 sing N N 180 ILE CB CG2 sing N N 181 ILE CB HB sing N N 182 ILE CG1 CD1 sing N N 183 ILE CG1 HG12 sing N N 184 ILE CG1 HG13 sing N N 185 ILE CG2 HG21 sing N N 186 ILE CG2 HG22 sing N N 187 ILE CG2 HG23 sing N N 188 ILE CD1 HD11 sing N N 189 ILE CD1 HD12 sing N N 190 ILE CD1 HD13 sing N N 191 ILE OXT HXT sing N N 192 LEU N CA sing N N 193 LEU N H sing N N 194 LEU N H2 sing N N 195 LEU CA C sing N N 196 LEU CA CB sing N N 197 LEU CA HA sing N N 198 LEU C O doub N N 199 LEU C OXT sing N N 200 LEU CB CG sing N N 201 LEU CB HB2 sing N N 202 LEU CB HB3 sing N N 203 LEU CG CD1 sing N N 204 LEU CG CD2 sing N N 205 LEU CG HG sing N N 206 LEU CD1 HD11 sing N N 207 LEU CD1 HD12 sing N N 208 LEU CD1 HD13 sing N N 209 LEU CD2 HD21 sing N N 210 LEU CD2 HD22 sing N N 211 LEU CD2 HD23 sing N N 212 LEU OXT HXT sing N N 213 LYS N CA sing N N 214 LYS N H sing N N 215 LYS N H2 sing N N 216 LYS CA C sing N N 217 LYS CA CB sing N N 218 LYS CA HA sing N N 219 LYS C O doub N N 220 LYS C OXT sing N N 221 LYS CB CG sing N N 222 LYS CB HB2 sing N N 223 LYS CB HB3 sing N N 224 LYS CG CD sing N N 225 LYS CG HG2 sing N N 226 LYS CG HG3 sing N N 227 LYS CD CE sing N N 228 LYS CD HD2 sing N N 229 LYS CD HD3 sing N N 230 LYS CE NZ sing N N 231 LYS CE HE2 sing N N 232 LYS CE HE3 sing N N 233 LYS NZ HZ1 sing N N 234 LYS NZ HZ2 sing N N 235 LYS NZ HZ3 sing N N 236 LYS OXT HXT sing N N 237 MAN C1 C2 sing N N 238 MAN C1 O1 sing N N 239 MAN C1 O5 sing N N 240 MAN C1 H1 sing N N 241 MAN C2 C3 sing N N 242 MAN C2 O2 sing N N 243 MAN C2 H2 sing N N 244 MAN C3 C4 sing N N 245 MAN C3 O3 sing N N 246 MAN C3 H3 sing N N 247 MAN C4 C5 sing N N 248 MAN C4 O4 sing N N 249 MAN C4 H4 sing N N 250 MAN C5 C6 sing N N 251 MAN C5 O5 sing N N 252 MAN C5 H5 sing N N 253 MAN C6 O6 sing N N 254 MAN C6 H61 sing N N 255 MAN C6 H62 sing N N 256 MAN O1 HO1 sing N N 257 MAN O2 HO2 sing N N 258 MAN O3 HO3 sing N N 259 MAN O4 HO4 sing N N 260 MAN O6 HO6 sing N N 261 MET N CA sing N N 262 MET N H sing N N 263 MET N H2 sing N N 264 MET CA C sing N N 265 MET CA CB sing N N 266 MET CA HA sing N N 267 MET C O doub N N 268 MET C OXT sing N N 269 MET CB CG sing N N 270 MET CB HB2 sing N N 271 MET CB HB3 sing N N 272 MET CG SD sing N N 273 MET CG HG2 sing N N 274 MET CG HG3 sing N N 275 MET SD CE sing N N 276 MET CE HE1 sing N N 277 MET CE HE2 sing N N 278 MET CE HE3 sing N N 279 MET OXT HXT sing N N 280 NAG C1 C2 sing N N 281 NAG C1 O1 sing N N 282 NAG C1 O5 sing N N 283 NAG C1 H1 sing N N 284 NAG C2 C3 sing N N 285 NAG C2 N2 sing N N 286 NAG C2 H2 sing N N 287 NAG C3 C4 sing N N 288 NAG C3 O3 sing N N 289 NAG C3 H3 sing N N 290 NAG C4 C5 sing N N 291 NAG C4 O4 sing N N 292 NAG C4 H4 sing N N 293 NAG C5 C6 sing N N 294 NAG C5 O5 sing N N 295 NAG C5 H5 sing N N 296 NAG C6 O6 sing N N 297 NAG C6 H61 sing N N 298 NAG C6 H62 sing N N 299 NAG C7 C8 sing N N 300 NAG C7 N2 sing N N 301 NAG C7 O7 doub N N 302 NAG C8 H81 sing N N 303 NAG C8 H82 sing N N 304 NAG C8 H83 sing N N 305 NAG N2 HN2 sing N N 306 NAG O1 HO1 sing N N 307 NAG O3 HO3 sing N N 308 NAG O4 HO4 sing N N 309 NAG O6 HO6 sing N N 310 PHE N CA sing N N 311 PHE N H sing N N 312 PHE N H2 sing N N 313 PHE CA C sing N N 314 PHE CA CB sing N N 315 PHE CA HA sing N N 316 PHE C O doub N N 317 PHE C OXT sing N N 318 PHE CB CG sing N N 319 PHE CB HB2 sing N N 320 PHE CB HB3 sing N N 321 PHE CG CD1 doub Y N 322 PHE CG CD2 sing Y N 323 PHE CD1 CE1 sing Y N 324 PHE CD1 HD1 sing N N 325 PHE CD2 CE2 doub Y N 326 PHE CD2 HD2 sing N N 327 PHE CE1 CZ doub Y N 328 PHE CE1 HE1 sing N N 329 PHE CE2 CZ sing Y N 330 PHE CE2 HE2 sing N N 331 PHE CZ HZ sing N N 332 PHE OXT HXT sing N N 333 PO4 P O1 doub N N 334 PO4 P O2 sing N N 335 PO4 P O3 sing N N 336 PO4 P O4 sing N N 337 PRO N CA sing N N 338 PRO N CD sing N N 339 PRO N H sing N N 340 PRO CA C sing N N 341 PRO CA CB sing N N 342 PRO CA HA sing N N 343 PRO C O doub N N 344 PRO C OXT sing N N 345 PRO CB CG sing N N 346 PRO CB HB2 sing N N 347 PRO CB HB3 sing N N 348 PRO CG CD sing N N 349 PRO CG HG2 sing N N 350 PRO CG HG3 sing N N 351 PRO CD HD2 sing N N 352 PRO CD HD3 sing N N 353 PRO OXT HXT sing N N 354 SER N CA sing N N 355 SER N H sing N N 356 SER N H2 sing N N 357 SER CA C sing N N 358 SER CA CB sing N N 359 SER CA HA sing N N 360 SER C O doub N N 361 SER C OXT sing N N 362 SER CB OG sing N N 363 SER CB HB2 sing N N 364 SER CB HB3 sing N N 365 SER OG HG sing N N 366 SER OXT HXT sing N N 367 THR N CA sing N N 368 THR N H sing N N 369 THR N H2 sing N N 370 THR CA C sing N N 371 THR CA CB sing N N 372 THR CA HA sing N N 373 THR C O doub N N 374 THR C OXT sing N N 375 THR CB OG1 sing N N 376 THR CB CG2 sing N N 377 THR CB HB sing N N 378 THR OG1 HG1 sing N N 379 THR CG2 HG21 sing N N 380 THR CG2 HG22 sing N N 381 THR CG2 HG23 sing N N 382 THR OXT HXT sing N N 383 TRP N CA sing N N 384 TRP N H sing N N 385 TRP N H2 sing N N 386 TRP CA C sing N N 387 TRP CA CB sing N N 388 TRP CA HA sing N N 389 TRP C O doub N N 390 TRP C OXT sing N N 391 TRP CB CG sing N N 392 TRP CB HB2 sing N N 393 TRP CB HB3 sing N N 394 TRP CG CD1 doub Y N 395 TRP CG CD2 sing Y N 396 TRP CD1 NE1 sing Y N 397 TRP CD1 HD1 sing N N 398 TRP CD2 CE2 doub Y N 399 TRP CD2 CE3 sing Y N 400 TRP NE1 CE2 sing Y N 401 TRP NE1 HE1 sing N N 402 TRP CE2 CZ2 sing Y N 403 TRP CE3 CZ3 doub Y N 404 TRP CE3 HE3 sing N N 405 TRP CZ2 CH2 doub Y N 406 TRP CZ2 HZ2 sing N N 407 TRP CZ3 CH2 sing Y N 408 TRP CZ3 HZ3 sing N N 409 TRP CH2 HH2 sing N N 410 TRP OXT HXT sing N N 411 TYR N CA sing N N 412 TYR N H sing N N 413 TYR N H2 sing N N 414 TYR CA C sing N N 415 TYR CA CB sing N N 416 TYR CA HA sing N N 417 TYR C O doub N N 418 TYR C OXT sing N N 419 TYR CB CG sing N N 420 TYR CB HB2 sing N N 421 TYR CB HB3 sing N N 422 TYR CG CD1 doub Y N 423 TYR CG CD2 sing Y N 424 TYR CD1 CE1 sing Y N 425 TYR CD1 HD1 sing N N 426 TYR CD2 CE2 doub Y N 427 TYR CD2 HD2 sing N N 428 TYR CE1 CZ doub Y N 429 TYR CE1 HE1 sing N N 430 TYR CE2 CZ sing Y N 431 TYR CE2 HE2 sing N N 432 TYR CZ OH sing N N 433 TYR OH HH sing N N 434 TYR OXT HXT sing N N 435 VAL N CA sing N N 436 VAL N H sing N N 437 VAL N H2 sing N N 438 VAL CA C sing N N 439 VAL CA CB sing N N 440 VAL CA HA sing N N 441 VAL C O doub N N 442 VAL C OXT sing N N 443 VAL CB CG1 sing N N 444 VAL CB CG2 sing N N 445 VAL CB HB sing N N 446 VAL CG1 HG11 sing N N 447 VAL CG1 HG12 sing N N 448 VAL CG1 HG13 sing N N 449 VAL CG2 HG21 sing N N 450 VAL CG2 HG22 sing N N 451 VAL CG2 HG23 sing N N 452 VAL OXT HXT sing N N 453 XYP O1 C1 sing N N 454 XYP O1 HO1 sing N N 455 XYP C1 C2 sing N N 456 XYP C1 O5 sing N N 457 XYP C1 H1 sing N N 458 XYP C2 C3 sing N N 459 XYP C2 O2 sing N N 460 XYP C2 H2 sing N N 461 XYP C3 C4 sing N N 462 XYP C3 O3 sing N N 463 XYP C3 H3 sing N N 464 XYP C4 C5 sing N N 465 XYP C4 O4 sing N N 466 XYP C4 H4 sing N N 467 XYP C5 O5 sing N N 468 XYP C5 H51 sing N N 469 XYP C5 H52 sing N N 470 XYP O2 HO2 sing N N 471 XYP O3 HO3 sing N N 472 XYP O4 HO4 sing N N 473 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 246 n B 2 NAG 2 B NAG 2 A NAG 247 n B 2 BMA 3 B BMA 3 A BMA 248 n B 2 XYP 4 B XYP 4 A XYP 251 n B 2 MAN 5 B MAN 5 A MAN 249 n B 2 MAN 6 B MAN 6 A MAN 250 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc XYP 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DXylpb XYP 'COMMON NAME' GMML 1.0 b-D-xylopyranose XYP 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Xylp XYP 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Xyl # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'DXylpb1-2[DManpa1-3][DManpa1-6]DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/4,6,5/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a212h-1b_1-5][a1122h-1a_1-5]/1-1-2-3-4-4/a4-b1_b4-c1_c2-d1_c3-e1_c6-f1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(2+1)][b-D-Xylp]{}[(3+1)][a-D-Manp]{}[(6+1)][a-D-Manp]{}}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 2 4 XYP C1 O1 3 BMA O2 HO2 sing ? 4 2 5 MAN C1 O1 3 BMA O3 HO3 sing ? 5 2 6 MAN C1 O1 3 BMA O6 HO6 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 BMA 3 n 2 XYP 4 n 2 MAN 5 n 2 MAN 6 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'PHOSPHATE ION' PO4 4 1,2-ETHANEDIOL EDO 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1TCS _pdbx_initial_refinement_model.details ? #