HEADER HYDROLASE 15-JAN-08 3BYC TITLE JOINT NEUTRON AND X-RAY STRUCTURE OF DIISOPROPYL FLUOROPHOSPHATASE. TITLE 2 DEUTERIUM OCCUPANCIES ARE 1-Q, WHERE Q IS OCCUPANCY OF H COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIISOPROPYL-FLUOROPHOSPHATASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DFPASE; COMPND 5 EC: 3.1.8.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LOLIGO VULGARIS; SOURCE 3 ORGANISM_COMMON: SQUID; SOURCE 4 ORGANISM_TAXID: 6622; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA-PROPELLER, PHOSPHOTRIESTERASE, HYDROLASE EXPDTA X-RAY DIFFRACTION; NEUTRON DIFFRACTION AUTHOR M.-M.BLUM,M.MUSTYAKIMOV,H.RUTERJANS,B.P.SCHOENBORN,P.LANGAN,J.C.- AUTHOR 2 H.CHEN REVDAT 3 21-FEB-24 3BYC 1 REMARK LINK REVDAT 2 13-JUL-11 3BYC 1 VERSN REVDAT 1 27-JAN-09 3BYC 0 JRNL AUTH M.M.BLUM,M.MUSTYAKIMOV,H.RUTERJANS,K.KEHE,B.P.SCHOENBORN, JRNL AUTH 2 P.LANGAN,J.C.CHEN JRNL TITL RAPID DETERMINATION OF HYDROGEN POSITIONS AND PROTONATION JRNL TITL 2 STATES OF DIISOPROPYL FLUOROPHOSPHATASE BY JOINT NEUTRON AND JRNL TITL 3 X-RAY DIFFRACTION REFINEMENT. JRNL REF PROC.NATL.ACAD.SCI.USA V. 106 713 2009 JRNL REFN ISSN 0027-8424 JRNL PMID 19136630 JRNL DOI 10.1073/PNAS.0807842106 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NCNS 1.0.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN,MUSTYAKIMOV, REMARK 3 : AFONINE,LANGAN REMARK 3 NEUTRON DATA. REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.54 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.500 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2011245.430 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 72.0 REMARK 3 NUMBER OF REFLECTIONS : 12042 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.264 REMARK 3 FREE R VALUE : 0.315 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 564 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.013 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2451 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 246 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 4.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 3 X-RAY DATA. REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.54 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.500 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2011245.430 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 72.0 REMARK 3 NUMBER OF REFLECTIONS : 12042 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 564 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.013 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.30 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 56.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1105 REMARK 3 BIN R VALUE (WORKING SET) : 0.3550 REMARK 3 BIN FREE R VALUE : 0.4000 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 59 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.052 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2451 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 246 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.36 REMARK 3 ESD FROM SIGMAA (A) : 0.48 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.43 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.53 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.000 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN-ALLHDG_HD.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : DOD.PARAM REMARK 3 TOPOLOGY FILE 1 : PROTEIN-ALLHDG_HD.TOP REMARK 3 TOPOLOGY FILE 2 : ION.TOP REMARK 3 TOPOLOGY FILE 3 : DOD.TOP REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3BYC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-FEB-08. REMARK 100 THE DEPOSITION ID IS D_1000046109. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-MAY-04 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: PDB ID 2GVW REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 230 REMARK 230 EXPERIMENTAL DETAILS REMARK 230 EXPERIMENT TYPE : NEUTRON DIFFRACTION REMARK 230 DATE OF DATA COLLECTION : 01-JAN-07 REMARK 230 TEMPERATURE (KELVIN) : 300.0 REMARK 230 PH : 6.50 REMARK 230 NUMBER OF CRYSTALS USED : NULL REMARK 230 REMARK 230 NEUTRON SOURCE : NULL REMARK 230 BEAMLINE : NULL REMARK 230 WAVELENGTH OR RANGE (A) : 0.6, 7.0 REMARK 230 MONOCHROMATOR : NULL REMARK 230 OPTICS : NULL REMARK 230 REMARK 230 DETECTOR TYPE : TOF AREA DETECTOR REMARK 230 DETECTOR MANUFACTURER : BNL REMARK 230 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 230 DATA SCALING SOFTWARE : NULL REMARK 230 REMARK 230 NUMBER OF UNIQUE REFLECTIONS : 12068 REMARK 230 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 230 RESOLUTION RANGE LOW (A) : 38.910 REMARK 230 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 230 REMARK 230 OVERALL. REMARK 230 COMPLETENESS FOR RANGE (%) : 43.3 REMARK 230 DATA REDUNDANCY : NULL REMARK 230 R MERGE (I) : NULL REMARK 230 R SYM (I) : NULL REMARK 230 FOR THE DATA SET : NULL REMARK 230 REMARK 230 IN THE HIGHEST RESOLUTION SHELL. REMARK 230 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 230 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 230 COMPLETENESS FOR SHELL (%) : NULL REMARK 230 DATA REDUNDANCY IN SHELL : NULL REMARK 230 R MERGE FOR SHELL (I) : NULL REMARK 230 R SYM FOR SHELL (I) : NULL REMARK 230 FOR SHELL : NULL REMARK 230 REMARK 230 METHOD USED TO DETERMINE THE STRUCTURE: PDB ID 2GVW REMARK 230 SOFTWARE USED : NULL REMARK 230 STARTING MODEL: NULL REMARK 230 REMARK 230 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, PH 6.5, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 298K. PEG 4000, PH 6.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.72050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.75450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.64550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 43.75450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.72050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.64550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 20 117.96 -27.47 REMARK 500 ALA A 45 41.90 -151.76 REMARK 500 ALA A 140 -77.43 11.64 REMARK 500 SER A 147 44.96 -86.12 REMARK 500 ALA A 170 31.85 76.51 REMARK 500 PHE A 173 67.25 65.16 REMARK 500 ASN A 175 -94.50 -124.34 REMARK 500 TYR A 188 -50.79 -120.17 REMARK 500 THR A 195 -72.02 -40.26 REMARK 500 ALA A 209 18.57 57.19 REMARK 500 ASP A 229 -102.13 -111.60 REMARK 500 PRO A 266 36.35 -82.72 REMARK 500 LYS A 269 64.02 -119.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 900 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 21 OE2 REMARK 620 2 ASN A 120 OD1 113.9 REMARK 620 3 ASN A 175 OD1 155.3 72.5 REMARK 620 4 ASP A 229 OD1 92.4 148.4 76.4 REMARK 620 5 DOD A1032 O 78.3 72.1 125.3 133.3 REMARK 620 6 DOD A1033 O 78.6 85.9 78.1 82.4 137.9 REMARK 620 7 DOD A1034 O 123.3 102.0 75.5 75.2 72.6 148.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 901 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 232 OD2 REMARK 620 2 LEU A 273 O 86.6 REMARK 620 3 HIS A 274 ND1 94.0 99.8 REMARK 620 4 DOD A1015 O 174.9 88.7 88.8 REMARK 620 5 DOD A1052 O 83.4 168.8 85.9 101.1 REMARK 620 6 DOD A1055 O 91.4 91.4 167.9 86.7 84.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 901 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2GVW RELATED DB: PDB DBREF 3BYC A 1 314 UNP Q7SIG4 DFPA_LOLVU 1 314 SEQRES 1 A 314 MET GLU ILE PRO VAL ILE GLU PRO LEU PHE THR LYS VAL SEQRES 2 A 314 THR GLU ASP ILE PRO GLY ALA GLU GLY PRO VAL PHE ASP SEQRES 3 A 314 LYS ASN GLY ASP PHE TYR ILE VAL ALA PRO GLU VAL GLU SEQRES 4 A 314 VAL ASN GLY LYS PRO ALA GLY GLU ILE LEU ARG ILE ASP SEQRES 5 A 314 LEU LYS THR GLY LYS LYS THR VAL ILE CYS LYS PRO GLU SEQRES 6 A 314 VAL ASN GLY TYR GLY GLY ILE PRO ALA GLY CYS GLN CYS SEQRES 7 A 314 ASP ARG ASP ALA ASN GLN LEU PHE VAL ALA ASP MET ARG SEQRES 8 A 314 LEU GLY LEU LEU VAL VAL GLN THR ASP GLY THR PHE GLU SEQRES 9 A 314 GLU ILE ALA LYS LYS ASP SER GLU GLY ARG ARG MET GLN SEQRES 10 A 314 GLY CYS ASN ASP CYS ALA PHE ASP TYR GLU GLY ASN LEU SEQRES 11 A 314 TRP ILE THR ALA PRO ALA GLY GLU VAL ALA PRO ALA ASP SEQRES 12 A 314 TYR THR ARG SER MET GLN GLU LYS PHE GLY SER ILE TYR SEQRES 13 A 314 CYS PHE THR THR ASP GLY GLN MET ILE GLN VAL ASP THR SEQRES 14 A 314 ALA PHE GLN PHE PRO ASN GLY ILE ALA VAL ARG HIS MET SEQRES 15 A 314 ASN ASP GLY ARG PRO TYR GLN LEU ILE VAL ALA GLU THR SEQRES 16 A 314 PRO THR LYS LYS LEU TRP SER TYR ASP ILE LYS GLY PRO SEQRES 17 A 314 ALA LYS ILE GLU ASN LYS LYS VAL TRP GLY HIS ILE PRO SEQRES 18 A 314 GLY THR HIS GLU GLY GLY ALA ASP GLY MET ASP PHE ASP SEQRES 19 A 314 GLU ASP ASN ASN LEU LEU VAL ALA ASN TRP GLY SER SER SEQRES 20 A 314 HIS ILE GLU VAL PHE GLY PRO ASP GLY GLY GLN PRO LYS SEQRES 21 A 314 MET ARG ILE ARG CYS PRO PHE GLU LYS PRO SER ASN LEU SEQRES 22 A 314 HIS PHE LYS PRO GLN THR LYS THR ILE PHE VAL THR GLU SEQRES 23 A 314 HIS GLU ASN ASN ALA VAL TRP LYS PHE GLU TRP GLN ARG SEQRES 24 A 314 ASN GLY LYS LYS GLN TYR CYS GLU THR LEU LYS PHE GLY SEQRES 25 A 314 ILE PHE HET CA A 900 1 HET CA A 901 1 HETNAM CA CALCIUM ION FORMUL 2 CA 2(CA 2+) FORMUL 4 DOD *246(D2 O) HELIX 1 1 GLN A 304 THR A 308 5 5 SHEET 1 A 5 VAL A 5 ILE A 6 0 SHEET 2 A 5 MET A 261 ARG A 264 1 O ARG A 264 N ILE A 6 SHEET 3 A 5 HIS A 248 PHE A 252 -1 N ILE A 249 O ILE A 263 SHEET 4 A 5 LEU A 239 TRP A 244 -1 N VAL A 241 O GLU A 250 SHEET 5 A 5 GLY A 227 PHE A 233 -1 N ASP A 229 O ALA A 242 SHEET 1 B 4 THR A 11 THR A 14 0 SHEET 2 B 4 ALA A 291 GLU A 296 -1 O VAL A 292 N VAL A 13 SHEET 3 B 4 THR A 281 GLU A 286 -1 N VAL A 284 O TRP A 293 SHEET 4 B 4 PRO A 270 PHE A 275 -1 N HIS A 274 O PHE A 283 SHEET 1 C 4 GLU A 21 PHE A 25 0 SHEET 2 C 4 PHE A 31 ALA A 35 -1 O TYR A 32 N VAL A 24 SHEET 3 C 4 GLU A 47 ILE A 51 -1 O GLU A 47 N ALA A 35 SHEET 4 C 4 LYS A 58 CYS A 62 -1 O THR A 59 N ARG A 50 SHEET 1 D 2 GLU A 39 VAL A 40 0 SHEET 2 D 2 LYS A 43 PRO A 44 -1 O LYS A 43 N VAL A 40 SHEET 1 E 2 GLU A 65 VAL A 66 0 SHEET 2 E 2 TYR A 69 GLY A 70 -1 O TYR A 69 N VAL A 66 SHEET 1 F 4 PRO A 73 CYS A 78 0 SHEET 2 F 4 GLN A 84 ASP A 89 -1 O PHE A 86 N GLN A 77 SHEET 3 F 4 GLY A 93 GLN A 98 -1 O GLY A 93 N ASP A 89 SHEET 4 F 4 PHE A 103 GLU A 105 -1 O GLU A 104 N VAL A 96 SHEET 1 G 4 ASP A 121 PHE A 124 0 SHEET 2 G 4 LEU A 130 ALA A 134 -1 O TRP A 131 N ALA A 123 SHEET 3 G 4 GLY A 153 PHE A 158 -1 O SER A 154 N ALA A 134 SHEET 4 G 4 MET A 164 PHE A 171 -1 O PHE A 171 N GLY A 153 SHEET 1 H 4 PRO A 174 HIS A 181 0 SHEET 2 H 4 PRO A 187 GLU A 194 -1 O ALA A 193 N ASN A 175 SHEET 3 H 4 LYS A 199 GLY A 207 -1 O TRP A 201 N VAL A 192 SHEET 4 H 4 LYS A 210 HIS A 219 -1 O GLU A 212 N ASP A 204 LINK OE2 GLU A 21 CA CA A 900 1555 1555 2.42 LINK OD1 ASN A 120 CA CA A 900 1555 1555 2.45 LINK OD1 ASN A 175 CA CA A 900 1555 1555 2.39 LINK OD1 ASP A 229 CA CA A 900 1555 1555 2.37 LINK OD2 ASP A 232 CA CA A 901 1555 1555 2.16 LINK O LEU A 273 CA CA A 901 1555 1555 2.23 LINK ND1 HIS A 274 CA CA A 901 1555 1555 2.43 LINK CA CA A 900 O DOD A1032 1555 1555 2.50 LINK CA CA A 900 O DOD A1033 1555 1555 2.48 LINK CA CA A 900 O DOD A1034 1555 1555 2.43 LINK CA CA A 901 O DOD A1015 1555 1555 2.43 LINK CA CA A 901 O DOD A1052 1555 1555 2.42 LINK CA CA A 901 O DOD A1055 1555 1555 2.38 SITE 1 AC1 7 GLU A 21 ASN A 120 ASN A 175 ASP A 229 SITE 2 AC1 7 DOD A1032 DOD A1033 DOD A1034 SITE 1 AC2 6 ASP A 232 LEU A 273 HIS A 274 DOD A1015 SITE 2 AC2 6 DOD A1052 DOD A1055 CRYST1 43.441 83.291 87.509 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023020 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012006 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011427 0.00000