HEADER SIGNALING PROTEIN 16-JAN-08 3BYI TITLE CRYSTAL STRUCTURE OF HUMAN RHO GTPASE ACTIVATING PROTEIN 15 (ARHGAP15) COMPND MOL_ID: 1; COMPND 2 MOLECULE: RHO GTPASE ACTIVATING PROTEIN 15; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: RESIDUES 262-473; COMPND 5 SYNONYM: RHO GTPASE ACTIVATING PROTEIN 15, ISOFORM CRA_D; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ARHGAP15; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)(R3)(PRARE2); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS RHO GTPASE, BM046, ARHGAP15, STRUCTURAL GENOMICS CONSORTIUM, SGC, KEYWDS 2 SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR L.SHRESTHA,J.TICKLE,J.ELKINS,N.BURGESS-BROWN,C.JOHANSSON, AUTHOR 2 E.PAPAGRIGORIOU,K.KAVANAGH,A.C.W.PIKE,E.UGOCHUKWU,J.UPPENBERG,F.VON AUTHOR 3 DELFT,C.H.ARROWSMITH,A.M.EDWARDS,J.WEIGELT,D.DOYLE,STRUCTURAL AUTHOR 4 GENOMICS CONSORTIUM (SGC) REVDAT 4 30-AUG-23 3BYI 1 SEQADV REVDAT 3 13-JUL-11 3BYI 1 VERSN REVDAT 2 24-FEB-09 3BYI 1 VERSN REVDAT 1 26-FEB-08 3BYI 0 JRNL AUTH L.SHRESTHA,J.TICKLE,J.ELKINS,N.BURGESS-BROWN,C.JOHANSSON, JRNL AUTH 2 E.PAPAGRIGORIOU,K.KAVANAGH,A.C.W.PIKE,E.UGOCHUKWU, JRNL AUTH 3 J.UPPENBERG,F.VON DELFT,C.H.ARROWSMITH,A.M.EDWARDS, JRNL AUTH 4 J.WEIGELT,D.DOYLE JRNL TITL CRYSTAL STRUCTURE OF HUMAN RHO GTPASE ACTIVATING PROTEIN 15 JRNL TITL 2 (ARHGAP15). JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 47463 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2418 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.31 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3291 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.91 REMARK 3 BIN R VALUE (WORKING SET) : 0.2500 REMARK 3 BIN FREE R VALUE SET COUNT : 172 REMARK 3 BIN FREE R VALUE : 0.3500 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6602 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 197 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.04000 REMARK 3 B22 (A**2) : 3.01000 REMARK 3 B33 (A**2) : -1.97000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.266 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.218 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.171 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.993 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6759 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4585 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9147 ; 1.379 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11240 ; 1.006 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 843 ; 5.688 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 301 ;36.647 ;24.751 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1205 ;14.796 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;20.527 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1044 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7450 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1322 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1607 ; 0.218 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 4569 ; 0.177 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3315 ; 0.178 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 3378 ; 0.086 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 216 ; 0.164 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 13 ; 0.279 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 41 ; 0.236 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.180 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4327 ; 2.023 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1695 ; 0.528 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6801 ; 2.915 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2728 ; 5.269 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2343 ; 6.794 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 8 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 263 A 293 4 REMARK 3 1 B 263 B 293 4 REMARK 3 1 C 263 C 293 4 REMARK 3 1 D 263 D 293 4 REMARK 3 2 A 294 A 330 2 REMARK 3 2 B 294 B 330 2 REMARK 3 2 C 294 C 330 2 REMARK 3 2 D 294 D 330 2 REMARK 3 3 A 331 A 338 1 REMARK 3 3 B 331 B 338 1 REMARK 3 3 C 331 C 338 1 REMARK 3 3 D 331 D 338 1 REMARK 3 4 A 339 A 368 2 REMARK 3 4 B 339 B 368 2 REMARK 3 4 C 339 C 368 2 REMARK 3 4 D 339 D 368 2 REMARK 3 5 A 369 A 404 4 REMARK 3 5 B 369 B 404 4 REMARK 3 5 C 369 C 404 4 REMARK 3 5 D 369 D 404 4 REMARK 3 6 A 405 A 439 2 REMARK 3 6 B 405 B 439 2 REMARK 3 6 C 405 C 439 2 REMARK 3 6 D 405 D 439 2 REMARK 3 7 A 440 A 451 4 REMARK 3 7 B 440 B 451 4 REMARK 3 7 C 440 C 451 4 REMARK 3 7 D 440 D 451 4 REMARK 3 8 A 452 A 470 2 REMARK 3 8 B 452 B 470 2 REMARK 3 8 C 452 C 470 2 REMARK 3 8 D 452 D 470 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 807 ; 0.060 ; 0.050 REMARK 3 TIGHT POSITIONAL 1 B (A): 807 ; 0.050 ; 0.050 REMARK 3 TIGHT POSITIONAL 1 C (A): 807 ; 0.040 ; 0.050 REMARK 3 TIGHT POSITIONAL 1 D (A): 807 ; 0.040 ; 0.050 REMARK 3 MEDIUM POSITIONAL 1 A (A): 1834 ; 0.470 ; 0.500 REMARK 3 MEDIUM POSITIONAL 1 B (A): 1834 ; 0.520 ; 0.500 REMARK 3 MEDIUM POSITIONAL 1 C (A): 1834 ; 0.390 ; 0.500 REMARK 3 MEDIUM POSITIONAL 1 D (A): 1834 ; 0.340 ; 0.500 REMARK 3 TIGHT THERMAL 1 A (A**2): 807 ; 0.180 ; 0.500 REMARK 3 TIGHT THERMAL 1 B (A**2): 807 ; 0.180 ; 0.500 REMARK 3 TIGHT THERMAL 1 C (A**2): 807 ; 0.150 ; 0.500 REMARK 3 TIGHT THERMAL 1 D (A**2): 807 ; 0.160 ; 0.500 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1834 ; 1.140 ; 2.000 REMARK 3 MEDIUM THERMAL 1 B (A**2): 1834 ; 1.080 ; 2.000 REMARK 3 MEDIUM THERMAL 1 C (A**2): 1834 ; 1.000 ; 2.000 REMARK 3 MEDIUM THERMAL 1 D (A**2): 1834 ; 1.060 ; 2.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 261 A 471 REMARK 3 ORIGIN FOR THE GROUP (A): 18.3287 -37.2958 -32.7971 REMARK 3 T TENSOR REMARK 3 T11: -0.1982 T22: 0.0264 REMARK 3 T33: -0.2307 T12: 0.0400 REMARK 3 T13: -0.0215 T23: -0.0776 REMARK 3 L TENSOR REMARK 3 L11: 1.7545 L22: 1.5351 REMARK 3 L33: 2.1854 L12: 0.4178 REMARK 3 L13: 0.0968 L23: 0.5836 REMARK 3 S TENSOR REMARK 3 S11: 0.0247 S12: 0.3293 S13: -0.1110 REMARK 3 S21: -0.0020 S22: -0.0278 S23: -0.0695 REMARK 3 S31: -0.0647 S32: 0.1098 S33: 0.0030 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 261 B 471 REMARK 3 ORIGIN FOR THE GROUP (A): 29.9814 -19.8642 1.1770 REMARK 3 T TENSOR REMARK 3 T11: -0.1066 T22: -0.1842 REMARK 3 T33: -0.1946 T12: -0.0193 REMARK 3 T13: 0.0492 T23: -0.0633 REMARK 3 L TENSOR REMARK 3 L11: 3.9844 L22: 1.3778 REMARK 3 L33: 3.2272 L12: 0.9223 REMARK 3 L13: -0.5924 L23: 0.3079 REMARK 3 S TENSOR REMARK 3 S11: 0.1267 S12: -0.0503 S13: 0.3588 REMARK 3 S21: 0.0554 S22: -0.0002 S23: 0.0366 REMARK 3 S31: -0.2338 S32: 0.2430 S33: -0.1265 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 263 C 472 REMARK 3 ORIGIN FOR THE GROUP (A): 52.4813 -24.1043 -10.4774 REMARK 3 T TENSOR REMARK 3 T11: -0.2037 T22: 0.0968 REMARK 3 T33: -0.1313 T12: -0.0527 REMARK 3 T13: 0.0125 T23: -0.1245 REMARK 3 L TENSOR REMARK 3 L11: 2.3684 L22: 1.6221 REMARK 3 L33: 2.9830 L12: 0.4389 REMARK 3 L13: -0.2265 L23: 0.6004 REMARK 3 S TENSOR REMARK 3 S11: 0.1618 S12: -0.0138 S13: -0.0540 REMARK 3 S21: 0.1444 S22: 0.0828 S23: -0.1407 REMARK 3 S31: -0.0078 S32: 0.3396 S33: -0.2445 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 263 D 471 REMARK 3 ORIGIN FOR THE GROUP (A): 32.0115 -55.8565 -21.8456 REMARK 3 T TENSOR REMARK 3 T11: -0.0132 T22: -0.1710 REMARK 3 T33: 0.1143 T12: 0.1051 REMARK 3 T13: -0.0291 T23: -0.1598 REMARK 3 L TENSOR REMARK 3 L11: 2.1692 L22: 1.6239 REMARK 3 L33: 3.4510 L12: 0.4661 REMARK 3 L13: 0.2662 L23: 0.7199 REMARK 3 S TENSOR REMARK 3 S11: 0.0560 S12: 0.1448 S13: -0.4584 REMARK 3 S21: 0.1680 S22: 0.0215 S23: -0.1818 REMARK 3 S31: 0.4361 S32: 0.1397 S33: -0.0775 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3BYI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-JAN-08. REMARK 100 THE DEPOSITION ID IS D_1000046115. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-APR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95362 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47518 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : 0.08600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 0.82300 REMARK 200 R SYM FOR SHELL (I) : 0.82300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: ASSEMBLY OF PDB ENTRIES 1TX4, 1OW3, 1RGP, 2NGR, REMARK 200 1GRN, 1F7C, 1AM4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.4M NA MALATE, PH 7.4, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 60.30900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 65.07100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 60.30900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 65.07100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8260 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 260 REMARK 465 SER A 472 REMARK 465 GLU A 473 REMARK 465 SER B 260 REMARK 465 SER B 472 REMARK 465 GLU B 473 REMARK 465 SER C 260 REMARK 465 MET C 261 REMARK 465 ARG C 262 REMARK 465 GLU C 473 REMARK 465 SER D 260 REMARK 465 MET D 261 REMARK 465 ARG D 262 REMARK 465 SER D 472 REMARK 465 GLU D 473 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 261 CG SD CE REMARK 470 LYS A 266 CG CD CE NZ REMARK 470 LYS A 271 CE NZ REMARK 470 LEU A 273 CG CD1 CD2 REMARK 470 LYS A 285 CE NZ REMARK 470 ARG A 317 NE CZ NH1 NH2 REMARK 470 GLU A 336 CD OE1 OE2 REMARK 470 GLU A 346 CD OE1 OE2 REMARK 470 GLU A 373 CG CD OE1 OE2 REMARK 470 GLN A 382 CD OE1 NE2 REMARK 470 LYS A 422 CE NZ REMARK 470 LYS A 468 NZ REMARK 470 MET B 261 CG SD CE REMARK 470 LYS B 266 CG CD CE NZ REMARK 470 GLU B 270 OE1 OE2 REMARK 470 LYS B 271 CG CD CE NZ REMARK 470 LEU B 273 CG CD1 CD2 REMARK 470 LYS B 275 CE NZ REMARK 470 LYS B 285 CE NZ REMARK 470 GLU B 303 CG CD OE1 OE2 REMARK 470 LYS B 327 CE NZ REMARK 470 LYS B 337 CG CD CE NZ REMARK 470 GLU B 346 CG CD OE1 OE2 REMARK 470 GLU B 373 OE1 OE2 REMARK 470 LYS B 422 CE NZ REMARK 470 LYS C 266 CG CD CE NZ REMARK 470 GLU C 270 CD OE1 OE2 REMARK 470 LYS C 271 NZ REMARK 470 LEU C 273 CG CD1 CD2 REMARK 470 LYS C 275 CD CE NZ REMARK 470 GLN C 277 CG CD OE1 NE2 REMARK 470 LYS C 285 CE NZ REMARK 470 GLU C 288 OE1 OE2 REMARK 470 ASN C 291 CG OD1 ND2 REMARK 470 ASP C 311 CG OD1 OD2 REMARK 470 LYS C 327 CE NZ REMARK 470 LYS C 337 CG CD CE NZ REMARK 470 GLU C 373 CG CD OE1 OE2 REMARK 470 GLU C 377 CD OE1 OE2 REMARK 470 LYS C 422 CD CE NZ REMARK 470 LYS C 468 CE NZ REMARK 470 SER C 472 OG REMARK 470 LYS D 266 CG CD CE NZ REMARK 470 LEU D 273 CG CD1 CD2 REMARK 470 LYS D 275 CE NZ REMARK 470 GLN D 277 CG CD OE1 NE2 REMARK 470 LYS D 285 CD CE NZ REMARK 470 ARG D 289 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 337 CG CD CE NZ REMARK 470 GLN D 382 CG CD OE1 NE2 REMARK 470 GLU D 389 CG CD OE1 OE2 REMARK 470 LYS D 415 CE NZ REMARK 470 LYS D 419 NZ REMARK 470 LYS D 422 CE NZ REMARK 470 LYS D 468 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 316 -22.44 83.74 REMARK 500 LYS B 266 -72.07 -58.35 REMARK 500 ASP B 276 53.59 -107.90 REMARK 500 ARG B 308 20.39 -143.03 REMARK 500 TYR B 316 -22.66 87.51 REMARK 500 GLU B 335 49.72 37.14 REMARK 500 ARG C 308 19.67 -142.32 REMARK 500 TYR C 316 -21.49 85.48 REMARK 500 GLU C 335 45.15 39.21 REMARK 500 LYS D 271 0.64 -67.46 REMARK 500 ASP D 276 66.89 -116.56 REMARK 500 GLN D 277 -73.35 -87.26 REMARK 500 TYR D 316 -21.42 84.92 REMARK 500 GLN D 334 4.36 -69.74 REMARK 500 REMARK 500 REMARK: NULL DBREF 3BYI A 262 473 UNP Q8IXX1 Q8IXX1_HUMAN 262 473 DBREF 3BYI B 262 473 UNP Q8IXX1 Q8IXX1_HUMAN 262 473 DBREF 3BYI C 262 473 UNP Q8IXX1 Q8IXX1_HUMAN 262 473 DBREF 3BYI D 262 473 UNP Q8IXX1 Q8IXX1_HUMAN 262 473 SEQADV 3BYI SER A 260 UNP Q8IXX1 EXPRESSION TAG SEQADV 3BYI MET A 261 UNP Q8IXX1 EXPRESSION TAG SEQADV 3BYI SER B 260 UNP Q8IXX1 EXPRESSION TAG SEQADV 3BYI MET B 261 UNP Q8IXX1 EXPRESSION TAG SEQADV 3BYI SER C 260 UNP Q8IXX1 EXPRESSION TAG SEQADV 3BYI MET C 261 UNP Q8IXX1 EXPRESSION TAG SEQADV 3BYI SER D 260 UNP Q8IXX1 EXPRESSION TAG SEQADV 3BYI MET D 261 UNP Q8IXX1 EXPRESSION TAG SEQRES 1 A 214 SER MET ARG PRO SER LEU LYS THR LEU GLN GLU LYS GLY SEQRES 2 A 214 LEU ILE LYS ASP GLN ILE PHE GLY SER HIS LEU HIS LYS SEQRES 3 A 214 VAL CYS GLU ARG GLU ASN SER THR VAL PRO TRP PHE VAL SEQRES 4 A 214 LYS GLN CYS ILE GLU ALA VAL GLU LYS ARG GLY LEU ASP SEQRES 5 A 214 VAL ASP GLY ILE TYR ARG VAL SER GLY ASN LEU ALA THR SEQRES 6 A 214 ILE GLN LYS LEU ARG PHE ILE VAL ASN GLN GLU GLU LYS SEQRES 7 A 214 LEU ASN LEU ASP ASP SER GLN TRP GLU ASP ILE HIS VAL SEQRES 8 A 214 VAL THR GLY ALA LEU LYS MET PHE PHE ARG GLU LEU PRO SEQRES 9 A 214 GLU PRO LEU PHE PRO TYR SER PHE PHE GLU GLN PHE VAL SEQRES 10 A 214 GLU ALA ILE LYS LYS GLN ASP ASN ASN THR ARG ILE GLU SEQRES 11 A 214 ALA VAL LYS SER LEU VAL GLN LYS LEU PRO PRO PRO ASN SEQRES 12 A 214 ARG ASP THR MET LYS VAL LEU PHE GLY HIS LEU THR LYS SEQRES 13 A 214 ILE VAL ALA LYS ALA SER LYS ASN LEU MET SER THR GLN SEQRES 14 A 214 SER LEU GLY ILE VAL PHE GLY PRO THR LEU LEU ARG ALA SEQRES 15 A 214 GLU ASN GLU THR GLY ASN MET ALA ILE HIS MET VAL TYR SEQRES 16 A 214 GLN ASN GLN ILE ALA GLU LEU MET LEU SER GLU TYR SER SEQRES 17 A 214 LYS ILE PHE GLY SER GLU SEQRES 1 B 214 SER MET ARG PRO SER LEU LYS THR LEU GLN GLU LYS GLY SEQRES 2 B 214 LEU ILE LYS ASP GLN ILE PHE GLY SER HIS LEU HIS LYS SEQRES 3 B 214 VAL CYS GLU ARG GLU ASN SER THR VAL PRO TRP PHE VAL SEQRES 4 B 214 LYS GLN CYS ILE GLU ALA VAL GLU LYS ARG GLY LEU ASP SEQRES 5 B 214 VAL ASP GLY ILE TYR ARG VAL SER GLY ASN LEU ALA THR SEQRES 6 B 214 ILE GLN LYS LEU ARG PHE ILE VAL ASN GLN GLU GLU LYS SEQRES 7 B 214 LEU ASN LEU ASP ASP SER GLN TRP GLU ASP ILE HIS VAL SEQRES 8 B 214 VAL THR GLY ALA LEU LYS MET PHE PHE ARG GLU LEU PRO SEQRES 9 B 214 GLU PRO LEU PHE PRO TYR SER PHE PHE GLU GLN PHE VAL SEQRES 10 B 214 GLU ALA ILE LYS LYS GLN ASP ASN ASN THR ARG ILE GLU SEQRES 11 B 214 ALA VAL LYS SER LEU VAL GLN LYS LEU PRO PRO PRO ASN SEQRES 12 B 214 ARG ASP THR MET LYS VAL LEU PHE GLY HIS LEU THR LYS SEQRES 13 B 214 ILE VAL ALA LYS ALA SER LYS ASN LEU MET SER THR GLN SEQRES 14 B 214 SER LEU GLY ILE VAL PHE GLY PRO THR LEU LEU ARG ALA SEQRES 15 B 214 GLU ASN GLU THR GLY ASN MET ALA ILE HIS MET VAL TYR SEQRES 16 B 214 GLN ASN GLN ILE ALA GLU LEU MET LEU SER GLU TYR SER SEQRES 17 B 214 LYS ILE PHE GLY SER GLU SEQRES 1 C 214 SER MET ARG PRO SER LEU LYS THR LEU GLN GLU LYS GLY SEQRES 2 C 214 LEU ILE LYS ASP GLN ILE PHE GLY SER HIS LEU HIS LYS SEQRES 3 C 214 VAL CYS GLU ARG GLU ASN SER THR VAL PRO TRP PHE VAL SEQRES 4 C 214 LYS GLN CYS ILE GLU ALA VAL GLU LYS ARG GLY LEU ASP SEQRES 5 C 214 VAL ASP GLY ILE TYR ARG VAL SER GLY ASN LEU ALA THR SEQRES 6 C 214 ILE GLN LYS LEU ARG PHE ILE VAL ASN GLN GLU GLU LYS SEQRES 7 C 214 LEU ASN LEU ASP ASP SER GLN TRP GLU ASP ILE HIS VAL SEQRES 8 C 214 VAL THR GLY ALA LEU LYS MET PHE PHE ARG GLU LEU PRO SEQRES 9 C 214 GLU PRO LEU PHE PRO TYR SER PHE PHE GLU GLN PHE VAL SEQRES 10 C 214 GLU ALA ILE LYS LYS GLN ASP ASN ASN THR ARG ILE GLU SEQRES 11 C 214 ALA VAL LYS SER LEU VAL GLN LYS LEU PRO PRO PRO ASN SEQRES 12 C 214 ARG ASP THR MET LYS VAL LEU PHE GLY HIS LEU THR LYS SEQRES 13 C 214 ILE VAL ALA LYS ALA SER LYS ASN LEU MET SER THR GLN SEQRES 14 C 214 SER LEU GLY ILE VAL PHE GLY PRO THR LEU LEU ARG ALA SEQRES 15 C 214 GLU ASN GLU THR GLY ASN MET ALA ILE HIS MET VAL TYR SEQRES 16 C 214 GLN ASN GLN ILE ALA GLU LEU MET LEU SER GLU TYR SER SEQRES 17 C 214 LYS ILE PHE GLY SER GLU SEQRES 1 D 214 SER MET ARG PRO SER LEU LYS THR LEU GLN GLU LYS GLY SEQRES 2 D 214 LEU ILE LYS ASP GLN ILE PHE GLY SER HIS LEU HIS LYS SEQRES 3 D 214 VAL CYS GLU ARG GLU ASN SER THR VAL PRO TRP PHE VAL SEQRES 4 D 214 LYS GLN CYS ILE GLU ALA VAL GLU LYS ARG GLY LEU ASP SEQRES 5 D 214 VAL ASP GLY ILE TYR ARG VAL SER GLY ASN LEU ALA THR SEQRES 6 D 214 ILE GLN LYS LEU ARG PHE ILE VAL ASN GLN GLU GLU LYS SEQRES 7 D 214 LEU ASN LEU ASP ASP SER GLN TRP GLU ASP ILE HIS VAL SEQRES 8 D 214 VAL THR GLY ALA LEU LYS MET PHE PHE ARG GLU LEU PRO SEQRES 9 D 214 GLU PRO LEU PHE PRO TYR SER PHE PHE GLU GLN PHE VAL SEQRES 10 D 214 GLU ALA ILE LYS LYS GLN ASP ASN ASN THR ARG ILE GLU SEQRES 11 D 214 ALA VAL LYS SER LEU VAL GLN LYS LEU PRO PRO PRO ASN SEQRES 12 D 214 ARG ASP THR MET LYS VAL LEU PHE GLY HIS LEU THR LYS SEQRES 13 D 214 ILE VAL ALA LYS ALA SER LYS ASN LEU MET SER THR GLN SEQRES 14 D 214 SER LEU GLY ILE VAL PHE GLY PRO THR LEU LEU ARG ALA SEQRES 15 D 214 GLU ASN GLU THR GLY ASN MET ALA ILE HIS MET VAL TYR SEQRES 16 D 214 GLN ASN GLN ILE ALA GLU LEU MET LEU SER GLU TYR SER SEQRES 17 D 214 LYS ILE PHE GLY SER GLU FORMUL 5 HOH *197(H2 O) HELIX 1 1 SER A 264 LYS A 271 1 8 HELIX 2 2 HIS A 282 ASN A 291 1 10 HELIX 3 3 PRO A 295 GLY A 309 1 15 HELIX 4 4 ASN A 321 GLN A 334 1 14 HELIX 5 5 ASP A 342 GLU A 346 5 5 HELIX 6 6 ASP A 347 LEU A 362 1 16 HELIX 7 7 PRO A 368 LYS A 380 1 13 HELIX 8 8 ASP A 383 LEU A 398 1 16 HELIX 9 9 PRO A 399 LYS A 419 1 21 HELIX 10 10 LYS A 419 LEU A 424 1 6 HELIX 11 11 SER A 426 ARG A 440 1 15 HELIX 12 12 ASN A 447 GLU A 465 1 19 HELIX 13 13 GLU A 465 GLY A 471 1 7 HELIX 14 14 SER B 264 LYS B 271 1 8 HELIX 15 15 HIS B 282 GLU B 290 1 9 HELIX 16 16 PRO B 295 GLY B 309 1 15 HELIX 17 17 ASN B 321 GLN B 334 1 14 HELIX 18 18 ASP B 342 GLU B 346 5 5 HELIX 19 19 ASP B 347 LEU B 362 1 16 HELIX 20 20 PRO B 368 LYS B 380 1 13 HELIX 21 21 ASP B 383 LYS B 397 1 15 HELIX 22 22 PRO B 399 LYS B 419 1 21 HELIX 23 23 LYS B 419 LEU B 424 1 6 HELIX 24 24 SER B 426 ARG B 440 1 15 HELIX 25 25 ASN B 447 GLU B 465 1 19 HELIX 26 26 GLU B 465 GLY B 471 1 7 HELIX 27 27 SER C 264 LYS C 271 1 8 HELIX 28 28 HIS C 282 GLU C 290 1 9 HELIX 29 29 PRO C 295 GLY C 309 1 15 HELIX 30 30 ASN C 321 GLN C 334 1 14 HELIX 31 31 ASP C 342 GLU C 346 5 5 HELIX 32 32 ASP C 347 LEU C 362 1 16 HELIX 33 33 PRO C 368 SER C 370 5 3 HELIX 34 34 PHE C 371 LYS C 380 1 10 HELIX 35 35 ASP C 383 LYS C 397 1 15 HELIX 36 36 PRO C 399 LYS C 419 1 21 HELIX 37 37 LYS C 419 LEU C 424 1 6 HELIX 38 38 SER C 426 ARG C 440 1 15 HELIX 39 39 ALA C 441 GLU C 444 5 4 HELIX 40 40 ASN C 447 GLU C 465 1 19 HELIX 41 41 GLU C 465 GLY C 471 1 7 HELIX 42 42 SER D 264 LYS D 271 1 8 HELIX 43 43 HIS D 282 ASN D 291 1 10 HELIX 44 44 PRO D 295 GLY D 309 1 15 HELIX 45 45 ASN D 321 GLN D 334 1 14 HELIX 46 46 ASP D 342 GLU D 346 5 5 HELIX 47 47 ASP D 347 LEU D 362 1 16 HELIX 48 48 PRO D 368 LYS D 380 1 13 HELIX 49 49 ASP D 383 GLN D 396 1 14 HELIX 50 50 PRO D 399 LYS D 419 1 21 HELIX 51 51 LYS D 419 LEU D 424 1 6 HELIX 52 52 SER D 426 LEU D 439 1 14 HELIX 53 53 ASN D 447 GLU D 465 1 19 HELIX 54 54 GLU D 465 GLY D 471 1 7 CRYST1 120.618 130.142 62.477 90.00 90.00 90.00 P 21 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008291 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007684 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016006 0.00000