HEADER CALCIUM BINDING PROTEIN 24-JAN-08 3C1V TITLE THE 1.5 A CRYSTAL STRUCTURE OF CA2+-BOUND S100A4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN S100-A4; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: S100 CALCIUM-BINDING PROTEIN A4, METASTASIN, PROTEIN MTS1, COMPND 5 PLACENTAL CALCIUM-BINDING PROTEIN, CALVASCULIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 GENE: S100A4; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET-11A KEYWDS S100A4, CA2+-BOUND, CALCIUM-BOUND, CALCIUM BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.R.GINGRAS,I.L.BARSUKOV REVDAT 5 01-NOV-23 3C1V 1 REMARK SEQADV LINK REVDAT 4 31-JAN-18 3C1V 1 REMARK REVDAT 3 24-FEB-09 3C1V 1 VERSN REVDAT 2 03-JUN-08 3C1V 1 JRNL REVDAT 1 01-APR-08 3C1V 0 JRNL AUTH A.R.GINGRAS,J.BASRAN,A.PRESCOTT,M.KRIAJEVSKA,C.R.BAGSHAW, JRNL AUTH 2 I.L.BARSUKOV JRNL TITL CRYSTAL STRUCTURE OF THE CA(2+)-FORM AND CA(2+)-BINDING JRNL TITL 2 KINETICS OF METASTASIS-ASSOCIATED PROTEIN, S100A4 JRNL REF FEBS LETT. V. 582 1651 2008 JRNL REFN ISSN 0014-5793 JRNL PMID 18435928 JRNL DOI 10.1016/J.FEBSLET.2008.04.017 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.31 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 64569 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3409 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4806 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.92 REMARK 3 BIN R VALUE (WORKING SET) : 0.2390 REMARK 3 BIN FREE R VALUE SET COUNT : 244 REMARK 3 BIN FREE R VALUE : 0.2640 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3058 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 552 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.54000 REMARK 3 B22 (A**2) : 0.54000 REMARK 3 B33 (A**2) : -0.81000 REMARK 3 B12 (A**2) : 0.27000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.106 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.081 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.053 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.099 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3357 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4551 ; 0.965 ; 1.987 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 464 ; 4.014 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 159 ;32.424 ;25.472 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 694 ;12.386 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ; 8.569 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 489 ; 0.074 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2536 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1872 ; 0.185 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2338 ; 0.299 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 466 ; 0.071 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 41 ; 0.074 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 140 ; 0.143 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 79 ; 0.068 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2093 ; 0.492 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3308 ; 0.783 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1394 ; 1.413 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1198 ; 1.750 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3487 ; 1.427 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 562 ; 0.959 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 3254 ; 0.794 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3C1V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-JAN-08. REMARK 100 THE DEPOSITION ID IS D_1000046236. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-SEP-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.931 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68427 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.750 REMARK 200 R MERGE (I) : 0.10200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.4600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.69 REMARK 200 R MERGE FOR SHELL (I) : 0.44800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.140 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1MHO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40% PEG600, 0.1M CHES, PH9.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 92.76000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 46.38000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -86.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -86.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -11 REMARK 465 ARG A -10 REMARK 465 GLY A -9 REMARK 465 SER A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ASP A 95 REMARK 465 LYS A 96 REMARK 465 GLN A 97 REMARK 465 PRO A 98 REMARK 465 ARG A 99 REMARK 465 LYS A 100 REMARK 465 LYS A 101 REMARK 465 MET B -11 REMARK 465 ARG B -10 REMARK 465 GLY B -9 REMARK 465 SER B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 ARG B 99 REMARK 465 LYS B 100 REMARK 465 LYS B 101 REMARK 465 MET C -11 REMARK 465 ARG C -10 REMARK 465 GLY C -9 REMARK 465 SER C -8 REMARK 465 HIS C -7 REMARK 465 HIS C -6 REMARK 465 HIS C -5 REMARK 465 HIS C -4 REMARK 465 HIS C -3 REMARK 465 HIS C -2 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 MET C 1 REMARK 465 ASP C 95 REMARK 465 LYS C 96 REMARK 465 GLN C 97 REMARK 465 PRO C 98 REMARK 465 ARG C 99 REMARK 465 LYS C 100 REMARK 465 LYS C 101 REMARK 465 MET D -11 REMARK 465 ARG D -10 REMARK 465 GLY D -9 REMARK 465 SER D -8 REMARK 465 HIS D -7 REMARK 465 HIS D -6 REMARK 465 HIS D -5 REMARK 465 HIS D -4 REMARK 465 HIS D -3 REMARK 465 HIS D -2 REMARK 465 GLY D -1 REMARK 465 SER D 0 REMARK 465 MET D 1 REMARK 465 ARG D 99 REMARK 465 LYS D 100 REMARK 465 LYS D 101 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 102 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 20 O REMARK 620 2 GLU A 23 O 103.3 REMARK 620 3 ASP A 25 O 80.7 88.4 REMARK 620 4 LYS A 28 O 90.6 161.6 82.0 REMARK 620 5 GLU A 33 OE1 100.3 111.2 159.3 77.3 REMARK 620 6 GLU A 33 OE2 74.5 75.5 146.1 120.4 50.9 REMARK 620 7 HOH A 114 O 173.5 79.4 93.6 85.5 84.0 112.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 103 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 63 OD1 REMARK 620 2 ASN A 65 OD1 81.4 REMARK 620 3 ASP A 67 OD1 84.0 77.2 REMARK 620 4 GLU A 69 O 84.3 154.4 80.2 REMARK 620 5 GLU A 74 OE1 118.1 123.9 149.7 81.7 REMARK 620 6 GLU A 74 OE2 94.7 76.0 153.1 126.6 51.9 REMARK 620 7 HOH A 108 O 159.1 85.4 77.3 101.4 82.8 97.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 102 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 20 O REMARK 620 2 GLU B 23 O 96.8 REMARK 620 3 ASP B 25 O 81.2 88.7 REMARK 620 4 LYS B 28 O 90.9 163.8 78.4 REMARK 620 5 GLU B 33 OE1 102.9 114.7 155.2 77.1 REMARK 620 6 GLU B 33 OE2 76.7 74.7 150.3 121.1 51.6 REMARK 620 7 HOH B 174 O 170.8 83.2 89.6 87.0 85.3 112.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 103 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 63 OD1 REMARK 620 2 ASN B 65 OD1 81.8 REMARK 620 3 ASP B 67 OD1 82.8 79.1 REMARK 620 4 GLU B 69 O 84.2 156.0 79.9 REMARK 620 5 GLU B 74 OE1 118.4 123.4 149.2 80.4 REMARK 620 6 GLU B 74 OE2 95.1 76.2 155.2 124.6 51.5 REMARK 620 7 HOH B 107 O 158.8 88.0 77.0 98.4 82.7 100.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 102 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER C 20 O REMARK 620 2 GLU C 23 O 104.4 REMARK 620 3 ASP C 25 O 81.5 87.1 REMARK 620 4 LYS C 28 O 88.9 161.9 82.7 REMARK 620 5 GLU C 33 OE1 101.2 111.0 160.0 77.6 REMARK 620 6 GLU C 33 OE2 74.7 76.6 146.5 119.5 51.0 REMARK 620 7 HOH C 151 O 172.3 78.6 91.7 86.7 83.9 112.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 103 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 63 OD1 REMARK 620 2 ASN C 65 OD1 82.9 REMARK 620 3 ASP C 67 OD1 83.6 77.3 REMARK 620 4 GLU C 69 O 83.7 154.6 79.7 REMARK 620 5 GLU C 74 OE1 118.3 123.5 149.5 81.9 REMARK 620 6 GLU C 74 OE2 96.4 75.7 152.9 127.4 51.8 REMARK 620 7 HOH C 106 O 159.3 85.6 77.1 100.0 82.4 97.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 103 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER D 20 O REMARK 620 2 GLU D 23 O 95.7 REMARK 620 3 ASP D 25 O 78.8 88.8 REMARK 620 4 LYS D 28 O 91.5 165.0 79.7 REMARK 620 5 GLU D 33 OE1 101.4 114.9 155.9 76.3 REMARK 620 6 GLU D 33 OE2 76.0 74.3 147.8 120.4 51.1 REMARK 620 7 HOH D 107 O 171.2 84.0 92.4 86.9 86.6 112.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 102 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 63 OD1 REMARK 620 2 ASN D 65 OD1 81.1 REMARK 620 3 ASP D 67 OD1 83.1 78.8 REMARK 620 4 GLU D 69 O 85.0 156.5 80.8 REMARK 620 5 GLU D 74 OE1 115.0 123.6 151.7 79.5 REMARK 620 6 GLU D 74 OE2 94.5 75.6 154.4 124.6 50.7 REMARK 620 7 HOH D 109 O 160.0 88.2 78.2 98.9 85.1 99.2 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA D 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA D 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 103 DBREF 3C1V A 1 101 UNP P26447 S10A4_HUMAN 1 101 DBREF 3C1V B 1 101 UNP P26447 S10A4_HUMAN 1 101 DBREF 3C1V C 1 101 UNP P26447 S10A4_HUMAN 1 101 DBREF 3C1V D 1 101 UNP P26447 S10A4_HUMAN 1 101 SEQADV 3C1V MET A -11 UNP P26447 EXPRESSION TAG SEQADV 3C1V ARG A -10 UNP P26447 EXPRESSION TAG SEQADV 3C1V GLY A -9 UNP P26447 EXPRESSION TAG SEQADV 3C1V SER A -8 UNP P26447 EXPRESSION TAG SEQADV 3C1V HIS A -7 UNP P26447 EXPRESSION TAG SEQADV 3C1V HIS A -6 UNP P26447 EXPRESSION TAG SEQADV 3C1V HIS A -5 UNP P26447 EXPRESSION TAG SEQADV 3C1V HIS A -4 UNP P26447 EXPRESSION TAG SEQADV 3C1V HIS A -3 UNP P26447 EXPRESSION TAG SEQADV 3C1V HIS A -2 UNP P26447 EXPRESSION TAG SEQADV 3C1V GLY A -1 UNP P26447 EXPRESSION TAG SEQADV 3C1V SER A 0 UNP P26447 EXPRESSION TAG SEQADV 3C1V MET B -11 UNP P26447 EXPRESSION TAG SEQADV 3C1V ARG B -10 UNP P26447 EXPRESSION TAG SEQADV 3C1V GLY B -9 UNP P26447 EXPRESSION TAG SEQADV 3C1V SER B -8 UNP P26447 EXPRESSION TAG SEQADV 3C1V HIS B -7 UNP P26447 EXPRESSION TAG SEQADV 3C1V HIS B -6 UNP P26447 EXPRESSION TAG SEQADV 3C1V HIS B -5 UNP P26447 EXPRESSION TAG SEQADV 3C1V HIS B -4 UNP P26447 EXPRESSION TAG SEQADV 3C1V HIS B -3 UNP P26447 EXPRESSION TAG SEQADV 3C1V HIS B -2 UNP P26447 EXPRESSION TAG SEQADV 3C1V GLY B -1 UNP P26447 EXPRESSION TAG SEQADV 3C1V SER B 0 UNP P26447 EXPRESSION TAG SEQADV 3C1V MET C -11 UNP P26447 EXPRESSION TAG SEQADV 3C1V ARG C -10 UNP P26447 EXPRESSION TAG SEQADV 3C1V GLY C -9 UNP P26447 EXPRESSION TAG SEQADV 3C1V SER C -8 UNP P26447 EXPRESSION TAG SEQADV 3C1V HIS C -7 UNP P26447 EXPRESSION TAG SEQADV 3C1V HIS C -6 UNP P26447 EXPRESSION TAG SEQADV 3C1V HIS C -5 UNP P26447 EXPRESSION TAG SEQADV 3C1V HIS C -4 UNP P26447 EXPRESSION TAG SEQADV 3C1V HIS C -3 UNP P26447 EXPRESSION TAG SEQADV 3C1V HIS C -2 UNP P26447 EXPRESSION TAG SEQADV 3C1V GLY C -1 UNP P26447 EXPRESSION TAG SEQADV 3C1V SER C 0 UNP P26447 EXPRESSION TAG SEQADV 3C1V MET D -11 UNP P26447 EXPRESSION TAG SEQADV 3C1V ARG D -10 UNP P26447 EXPRESSION TAG SEQADV 3C1V GLY D -9 UNP P26447 EXPRESSION TAG SEQADV 3C1V SER D -8 UNP P26447 EXPRESSION TAG SEQADV 3C1V HIS D -7 UNP P26447 EXPRESSION TAG SEQADV 3C1V HIS D -6 UNP P26447 EXPRESSION TAG SEQADV 3C1V HIS D -5 UNP P26447 EXPRESSION TAG SEQADV 3C1V HIS D -4 UNP P26447 EXPRESSION TAG SEQADV 3C1V HIS D -3 UNP P26447 EXPRESSION TAG SEQADV 3C1V HIS D -2 UNP P26447 EXPRESSION TAG SEQADV 3C1V GLY D -1 UNP P26447 EXPRESSION TAG SEQADV 3C1V SER D 0 UNP P26447 EXPRESSION TAG SEQRES 1 A 113 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER MET SEQRES 2 A 113 ALA CYS PRO LEU GLU LYS ALA LEU ASP VAL MET VAL SER SEQRES 3 A 113 THR PHE HIS LYS TYR SER GLY LYS GLU GLY ASP LYS PHE SEQRES 4 A 113 LYS LEU ASN LYS SER GLU LEU LYS GLU LEU LEU THR ARG SEQRES 5 A 113 GLU LEU PRO SER PHE LEU GLY LYS ARG THR ASP GLU ALA SEQRES 6 A 113 ALA PHE GLN LYS LEU MET SER ASN LEU ASP SER ASN ARG SEQRES 7 A 113 ASP ASN GLU VAL ASP PHE GLN GLU TYR CYS VAL PHE LEU SEQRES 8 A 113 SER CYS ILE ALA MET MET CYS ASN GLU PHE PHE GLU GLY SEQRES 9 A 113 PHE PRO ASP LYS GLN PRO ARG LYS LYS SEQRES 1 B 113 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER MET SEQRES 2 B 113 ALA CYS PRO LEU GLU LYS ALA LEU ASP VAL MET VAL SER SEQRES 3 B 113 THR PHE HIS LYS TYR SER GLY LYS GLU GLY ASP LYS PHE SEQRES 4 B 113 LYS LEU ASN LYS SER GLU LEU LYS GLU LEU LEU THR ARG SEQRES 5 B 113 GLU LEU PRO SER PHE LEU GLY LYS ARG THR ASP GLU ALA SEQRES 6 B 113 ALA PHE GLN LYS LEU MET SER ASN LEU ASP SER ASN ARG SEQRES 7 B 113 ASP ASN GLU VAL ASP PHE GLN GLU TYR CYS VAL PHE LEU SEQRES 8 B 113 SER CYS ILE ALA MET MET CYS ASN GLU PHE PHE GLU GLY SEQRES 9 B 113 PHE PRO ASP LYS GLN PRO ARG LYS LYS SEQRES 1 C 113 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER MET SEQRES 2 C 113 ALA CYS PRO LEU GLU LYS ALA LEU ASP VAL MET VAL SER SEQRES 3 C 113 THR PHE HIS LYS TYR SER GLY LYS GLU GLY ASP LYS PHE SEQRES 4 C 113 LYS LEU ASN LYS SER GLU LEU LYS GLU LEU LEU THR ARG SEQRES 5 C 113 GLU LEU PRO SER PHE LEU GLY LYS ARG THR ASP GLU ALA SEQRES 6 C 113 ALA PHE GLN LYS LEU MET SER ASN LEU ASP SER ASN ARG SEQRES 7 C 113 ASP ASN GLU VAL ASP PHE GLN GLU TYR CYS VAL PHE LEU SEQRES 8 C 113 SER CYS ILE ALA MET MET CYS ASN GLU PHE PHE GLU GLY SEQRES 9 C 113 PHE PRO ASP LYS GLN PRO ARG LYS LYS SEQRES 1 D 113 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER MET SEQRES 2 D 113 ALA CYS PRO LEU GLU LYS ALA LEU ASP VAL MET VAL SER SEQRES 3 D 113 THR PHE HIS LYS TYR SER GLY LYS GLU GLY ASP LYS PHE SEQRES 4 D 113 LYS LEU ASN LYS SER GLU LEU LYS GLU LEU LEU THR ARG SEQRES 5 D 113 GLU LEU PRO SER PHE LEU GLY LYS ARG THR ASP GLU ALA SEQRES 6 D 113 ALA PHE GLN LYS LEU MET SER ASN LEU ASP SER ASN ARG SEQRES 7 D 113 ASP ASN GLU VAL ASP PHE GLN GLU TYR CYS VAL PHE LEU SEQRES 8 D 113 SER CYS ILE ALA MET MET CYS ASN GLU PHE PHE GLU GLY SEQRES 9 D 113 PHE PRO ASP LYS GLN PRO ARG LYS LYS HET CA A 102 1 HET CA A 103 1 HET CA B 102 1 HET CA B 103 1 HET CA C 102 1 HET CA C 103 1 HET CA D 102 1 HET CA D 103 1 HETNAM CA CALCIUM ION FORMUL 5 CA 8(CA 2+) FORMUL 13 HOH *552(H2 O) HELIX 1 1 CYS A 3 GLY A 21 1 19 HELIX 2 2 ASN A 30 LEU A 42 1 13 HELIX 3 3 LEU A 42 GLY A 47 1 6 HELIX 4 4 ASP A 51 ASP A 63 1 13 HELIX 5 5 PHE A 72 PHE A 89 1 18 HELIX 6 6 CYS B 3 GLY B 21 1 19 HELIX 7 7 ASN B 30 LEU B 42 1 13 HELIX 8 8 LEU B 42 GLY B 47 1 6 HELIX 9 9 ASP B 51 ASP B 63 1 13 HELIX 10 10 PHE B 72 PHE B 89 1 18 HELIX 11 11 CYS C 3 GLY C 21 1 19 HELIX 12 12 ASN C 30 LEU C 42 1 13 HELIX 13 13 LEU C 42 GLY C 47 1 6 HELIX 14 14 ASP C 51 ASP C 63 1 13 HELIX 15 15 PHE C 72 PHE C 89 1 18 HELIX 16 16 CYS D 3 GLY D 21 1 19 HELIX 17 17 ASN D 30 LEU D 42 1 13 HELIX 18 18 LEU D 42 GLY D 47 1 6 HELIX 19 19 ASP D 51 ASP D 63 1 13 HELIX 20 20 PHE D 72 PHE D 89 1 18 SHEET 1 A 2 LYS A 28 LEU A 29 0 SHEET 2 A 2 VAL A 70 ASP A 71 -1 O VAL A 70 N LEU A 29 SHEET 1 B 2 LYS B 28 LEU B 29 0 SHEET 2 B 2 VAL B 70 ASP B 71 -1 O VAL B 70 N LEU B 29 SHEET 1 C 2 LYS C 28 LEU C 29 0 SHEET 2 C 2 VAL C 70 ASP C 71 -1 O VAL C 70 N LEU C 29 SHEET 1 D 2 LYS D 28 LEU D 29 0 SHEET 2 D 2 VAL D 70 ASP D 71 -1 O VAL D 70 N LEU D 29 LINK O SER A 20 CA CA A 102 1555 1555 2.40 LINK O GLU A 23 CA CA A 102 1555 1555 2.35 LINK O ASP A 25 CA CA A 102 1555 1555 2.30 LINK O LYS A 28 CA CA A 102 1555 1555 2.39 LINK OE1 GLU A 33 CA CA A 102 1555 1555 2.44 LINK OE2 GLU A 33 CA CA A 102 1555 1555 2.63 LINK OD1 ASP A 63 CA CA A 103 1555 1555 2.33 LINK OD1 ASN A 65 CA CA A 103 1555 1555 2.34 LINK OD1 ASP A 67 CA CA A 103 1555 1555 2.40 LINK O GLU A 69 CA CA A 103 1555 1555 2.33 LINK OE1 GLU A 74 CA CA A 103 1555 1555 2.42 LINK OE2 GLU A 74 CA CA A 103 1555 1555 2.57 LINK CA CA A 102 O HOH A 114 1555 1555 2.36 LINK CA CA A 103 O HOH A 108 1555 1555 2.39 LINK O SER B 20 CA CA B 102 1555 1555 2.36 LINK O GLU B 23 CA CA B 102 1555 1555 2.36 LINK O ASP B 25 CA CA B 102 1555 1555 2.38 LINK O LYS B 28 CA CA B 102 1555 1555 2.41 LINK OE1 GLU B 33 CA CA B 102 1555 1555 2.41 LINK OE2 GLU B 33 CA CA B 102 1555 1555 2.60 LINK OD1 ASP B 63 CA CA B 103 1555 1555 2.28 LINK OD1 ASN B 65 CA CA B 103 1555 1555 2.30 LINK OD1 ASP B 67 CA CA B 103 1555 1555 2.41 LINK O GLU B 69 CA CA B 103 1555 1555 2.32 LINK OE1 GLU B 74 CA CA B 103 1555 1555 2.43 LINK OE2 GLU B 74 CA CA B 103 1555 1555 2.62 LINK CA CA B 102 O HOH B 174 1555 1555 2.43 LINK CA CA B 103 O HOH B 107 1555 1555 2.38 LINK O SER C 20 CA CA C 102 1555 1555 2.36 LINK O GLU C 23 CA CA C 102 1555 1555 2.34 LINK O ASP C 25 CA CA C 102 1555 1555 2.30 LINK O LYS C 28 CA CA C 102 1555 1555 2.38 LINK OE1 GLU C 33 CA CA C 102 1555 1555 2.45 LINK OE2 GLU C 33 CA CA C 102 1555 1555 2.62 LINK OD1 ASP C 63 CA CA C 103 1555 1555 2.29 LINK OD1 ASN C 65 CA CA C 103 1555 1555 2.35 LINK OD1 ASP C 67 CA CA C 103 1555 1555 2.44 LINK O GLU C 69 CA CA C 103 1555 1555 2.30 LINK OE1 GLU C 74 CA CA C 103 1555 1555 2.41 LINK OE2 GLU C 74 CA CA C 103 1555 1555 2.59 LINK CA CA C 102 O HOH C 151 1555 1555 2.38 LINK CA CA C 103 O HOH C 106 1555 1555 2.37 LINK O SER D 20 CA CA D 103 1555 1555 2.41 LINK O GLU D 23 CA CA D 103 1555 1555 2.35 LINK O ASP D 25 CA CA D 103 1555 1555 2.37 LINK O LYS D 28 CA CA D 103 1555 1555 2.41 LINK OE1 GLU D 33 CA CA D 103 1555 1555 2.43 LINK OE2 GLU D 33 CA CA D 103 1555 1555 2.63 LINK OD1 ASP D 63 CA CA D 102 1555 1555 2.30 LINK OD1 ASN D 65 CA CA D 102 1555 1555 2.29 LINK OD1 ASP D 67 CA CA D 102 1555 1555 2.40 LINK O GLU D 69 CA CA D 102 1555 1555 2.32 LINK OE1 GLU D 74 CA CA D 102 1555 1555 2.45 LINK OE2 GLU D 74 CA CA D 102 1555 1555 2.65 LINK CA CA D 102 O HOH D 109 1555 1555 2.33 LINK CA CA D 103 O HOH D 107 1555 1555 2.39 CISPEP 1 GLN B 97 PRO B 98 0 -3.09 CISPEP 2 GLN D 97 PRO D 98 0 -14.24 SITE 1 AC1 5 ASP D 63 ASN D 65 ASP D 67 GLU D 69 SITE 2 AC1 5 GLU D 74 SITE 1 AC2 5 SER D 20 GLU D 23 ASP D 25 LYS D 28 SITE 2 AC2 5 GLU D 33 SITE 1 AC3 5 SER B 20 GLU B 23 ASP B 25 LYS B 28 SITE 2 AC3 5 GLU B 33 SITE 1 AC4 5 ASP B 63 ASN B 65 ASP B 67 GLU B 69 SITE 2 AC4 5 GLU B 74 SITE 1 AC5 5 SER C 20 GLU C 23 ASP C 25 LYS C 28 SITE 2 AC5 5 GLU C 33 SITE 1 AC6 5 ASP C 63 ASN C 65 ASP C 67 GLU C 69 SITE 2 AC6 5 GLU C 74 SITE 1 AC7 5 SER A 20 GLU A 23 ASP A 25 LYS A 28 SITE 2 AC7 5 GLU A 33 SITE 1 AC8 5 ASP A 63 ASN A 65 ASP A 67 GLU A 69 SITE 2 AC8 5 GLU A 74 CRYST1 52.320 52.320 139.140 90.00 90.00 120.00 P 32 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019113 0.011035 0.000000 0.00000 SCALE2 0.000000 0.022070 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007187 0.00000