HEADER TRANSFERASE 24-JAN-08 3C26 TITLE CRYSTAL STRUCTURE OF A PUTATIVE ACETYLTRANSFERASE (NP_394282.1) FROM TITLE 2 THERMOPLASMA ACIDOPHILUM AT 2.00 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE ACETYLTRANSFERASE TA0821; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOPLASMA ACIDOPHILUM DSM 1728; SOURCE 3 ORGANISM_TAXID: 273075; SOURCE 4 STRAIN: DSM 1728 / AMRC-C165 / IFO 15155 / JCM 9062; SOURCE 5 ATCC: 25905; SOURCE 6 GENE: NP_394282.1, TA0821; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS NP_394282.1, A PUTATIVE ACETYLTRANSFERASE, ACETYLTRANSFERASE (GNAT) KEYWDS 2 FAMILY, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, KEYWDS 3 JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 6 01-FEB-23 3C26 1 REMARK SEQADV REVDAT 5 24-JUL-19 3C26 1 REMARK LINK REVDAT 4 25-OCT-17 3C26 1 REMARK REVDAT 3 13-JUL-11 3C26 1 VERSN REVDAT 2 24-FEB-09 3C26 1 VERSN REVDAT 1 05-FEB-08 3C26 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE ACETYLTRANSFERASE JRNL TITL 2 (NP_394282.1) FROM THERMOPLASMA ACIDOPHILUM AT 2.00 A JRNL TITL 3 RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0067 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.49 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 17882 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 912 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1193 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.22 REMARK 3 BIN R VALUE (WORKING SET) : 0.2110 REMARK 3 BIN FREE R VALUE SET COUNT : 79 REMARK 3 BIN FREE R VALUE : 0.3080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2067 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 150 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 23.54 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.195 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.180 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.123 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.552 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2159 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1476 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2920 ; 1.609 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3544 ; 1.288 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 259 ; 4.419 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 103 ;31.466 ;22.816 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 340 ;14.232 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;15.807 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 305 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2411 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 487 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1289 ; 0.894 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 525 ; 0.217 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2065 ; 1.606 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 870 ; 2.585 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 853 ; 4.037 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 265 REMARK 3 ORIGIN FOR THE GROUP (A): 32.6470 29.6270 17.4760 REMARK 3 T TENSOR REMARK 3 T11: -0.0471 T22: -0.0161 REMARK 3 T33: -0.0974 T12: -0.0206 REMARK 3 T13: 0.0005 T23: 0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.7190 L22: 1.0069 REMARK 3 L33: 0.6665 L12: -0.0694 REMARK 3 L13: -0.0155 L23: -0.1242 REMARK 3 S TENSOR REMARK 3 S11: -0.0146 S12: 0.0539 S13: 0.0245 REMARK 3 S21: -0.0092 S22: 0.0031 S23: 0.0347 REMARK 3 S31: 0.0321 S32: -0.0636 S33: 0.0115 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY REMARK 3 OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 REMARK 3 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. REMARK 3 3. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. REMARK 3 4. THERE IS AN UNKNOWN DENSITY NEAR HIS 140. REMARK 3 5. NO3 AND EDO WERE MODELED BASED ON CRYSTALLIZATION REMARK 3 AND CRYOPROTECTION CONDITIONS. REMARK 4 REMARK 4 3C26 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JAN-08. REMARK 100 THE DEPOSITION ID IS D_1000046247. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-DEC-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97895 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 (HORIZONTAL FOCUSING) REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17927 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 29.488 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.10500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.5300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.60000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX, SHELXD, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NANODROP, 0.2M NANO3, 20.0% PEG 3350, REMARK 280 NO BUFFER PH 6.8, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.63000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 43.41000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.41000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 50.44500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.41000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 43.41000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 16.81500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.41000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.41000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 50.44500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 43.41000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.41000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 16.81500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 33.63000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2450 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 86.82000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 86.82000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 33.63000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MSE A 1 REMARK 465 SER A 2 REMARK 465 ALA A 3 REMARK 465 ASP A 4 REMARK 465 THR A 155 REMARK 465 ALA A 156 REMARK 465 VAL A 157 REMARK 465 PRO A 158 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 5 CG1 CG2 CD1 REMARK 470 ARG A 9 CZ NH1 NH2 REMARK 470 LYS A 27 CG CD CE NZ REMARK 470 ARG A 136 CZ NH1 NH2 REMARK 470 SER A 154 OG REMARK 470 ARG A 166 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 187 CG OD1 OD2 REMARK 470 ILE A 189 CG1 CG2 CD1 REMARK 470 GLU A 191 CG CD OE1 OE2 REMARK 470 ASP A 222 CG OD1 OD2 REMARK 470 LYS A 230 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 98 -169.36 -78.22 REMARK 500 ASN A 164 66.23 -119.56 REMARK 500 ASP A 200 107.20 -171.98 REMARK 500 ASP A 223 80.82 -153.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 266 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 267 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 268 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 269 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 270 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 271 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 272 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 273 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 376023 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE FOLLOWED BY THE TARGET SEQUENCE. DBREF 3C26 A 1 265 UNP Q9HJZ0 Q9HJZ0_THEAC 1 265 SEQADV 3C26 GLY A 0 UNP Q9HJZ0 EXPRESSION TAG SEQRES 1 A 266 GLY MSE SER ALA ASP ILE VAL PHE ASP ARG GLY SER PRO SEQRES 2 A 266 SER ASP ILE ASP GLU ILE LYS THR PHE THR SER ASN THR SEQRES 3 A 266 TRP LYS VAL GLY TYR TYR THR ASP LEU TYR SER LYS LEU SEQRES 4 A 266 ALA ASP THR GLY THR MSE ASP ASP TYR VAL ASP LYS VAL SEQRES 5 A 266 ILE GLU ARG TRP VAL ASN ASP GLY SER VAL TYR VAL LEU SEQRES 6 A 266 ARG VAL SER GLY ARG PRO VAL ALA THR ILE HIS MSE GLU SEQRES 7 A 266 LYS LEU PRO ASP GLY SER VAL MSE LEU GLY GLY LEU ARG SEQRES 8 A 266 VAL HIS PRO GLU TYR ARG GLY SER ARG LEU GLY MSE SER SEQRES 9 A 266 ILE MSE GLN GLU THR ILE GLN PHE LEU ARG GLY LYS THR SEQRES 10 A 266 GLU ARG LEU ARG SER ALA VAL TYR SER TRP ASN GLU PRO SEQRES 11 A 266 SER LEU ARG LEU VAL HIS ARG LEU GLY PHE HIS GLN VAL SEQRES 12 A 266 GLU GLU TYR PRO ILE TYR THR PHE GLN GLY GLY SER THR SEQRES 13 A 266 ALA VAL PRO ALA LEU LYS PRO VAL ASN GLU ARG TYR ALA SEQRES 14 A 266 GLY ARG TRP ARG CYS PHE PHE ILE ASP TRP LYS TYR MSE SEQRES 15 A 266 CYS SER ASP ASP PRO ASP ILE ILE HIS GLU GLU TYR SER SEQRES 16 A 266 ASN ASN LEU ILE VAL ASP GLY SER THR PHE VAL TYR PHE SEQRES 17 A 266 ASP ILE TYR GLU GLY GLY ILE ASP LEU PHE VAL ASN ASP SEQRES 18 A 266 SER ASP ASP ALA SER SER PHE ILE GLU LYS TYR ARG SER SEQRES 19 A 266 MSE ASN GLY ARG ILE THR PHE TYR VAL ARG LYS ALA LEU SEQRES 20 A 266 ALA ASN GLY LEU PRO TYR VAL PRO ALA SER SER LEU THR SEQRES 21 A 266 VAL TRP GLU TYR ARG TYR MODRES 3C26 MSE A 44 MET SELENOMETHIONINE MODRES 3C26 MSE A 76 MET SELENOMETHIONINE MODRES 3C26 MSE A 85 MET SELENOMETHIONINE MODRES 3C26 MSE A 102 MET SELENOMETHIONINE MODRES 3C26 MSE A 105 MET SELENOMETHIONINE MODRES 3C26 MSE A 181 MET SELENOMETHIONINE MODRES 3C26 MSE A 234 MET SELENOMETHIONINE HET MSE A 44 8 HET MSE A 76 8 HET MSE A 85 8 HET MSE A 102 8 HET MSE A 105 8 HET MSE A 181 8 HET MSE A 234 8 HET NO3 A 266 4 HET NO3 A 267 4 HET NO3 A 268 4 HET EDO A 269 4 HET EDO A 270 4 HET EDO A 271 4 HET EDO A 272 4 HET EDO A 273 4 HETNAM MSE SELENOMETHIONINE HETNAM NO3 NITRATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 7(C5 H11 N O2 SE) FORMUL 2 NO3 3(N O3 1-) FORMUL 5 EDO 5(C2 H6 O2) FORMUL 10 HOH *150(H2 O) HELIX 1 1 SER A 11 SER A 13 5 3 HELIX 2 2 ASP A 14 LYS A 19 1 6 HELIX 3 3 GLY A 29 ASP A 40 1 12 HELIX 4 4 THR A 43 ASP A 58 1 16 HELIX 5 5 PRO A 93 ARG A 96 5 4 HELIX 6 6 ARG A 99 ARG A 113 1 15 HELIX 7 7 ASN A 127 GLY A 138 1 12 HELIX 8 8 ASP A 185 TYR A 193 1 9 HELIX 9 9 ASP A 223 ARG A 232 1 10 HELIX 10 10 ARG A 243 ASN A 248 1 6 SHEET 1 A12 VAL A 6 ARG A 9 0 SHEET 2 A12 VAL A 61 VAL A 66 -1 O VAL A 63 N ASP A 8 SHEET 3 A12 ARG A 69 LYS A 78 -1 O VAL A 71 N LEU A 64 SHEET 4 A12 VAL A 84 VAL A 91 -1 O GLY A 87 N HIS A 75 SHEET 5 A12 ARG A 118 TYR A 124 1 O ARG A 120 N LEU A 86 SHEET 6 A12 SER A 257 ARG A 264 -1 O TRP A 261 N SER A 121 SHEET 7 A12 HIS A 140 GLY A 152 -1 N VAL A 142 O VAL A 260 SHEET 8 A12 GLY A 236 VAL A 242 -1 O ILE A 238 N PHE A 150 SHEET 9 A12 GLY A 213 ASP A 220 1 N LEU A 216 O THR A 239 SHEET 10 A12 THR A 203 TYR A 210 -1 N TYR A 206 O PHE A 217 SHEET 11 A12 LEU A 197 GLY A 201 -1 N ILE A 198 O VAL A 205 SHEET 12 A12 VAL A 163 TYR A 167 1 N ARG A 166 O GLY A 201 SHEET 1 B 2 CYS A 173 ILE A 176 0 SHEET 2 B 2 LYS A 179 CYS A 182 -1 O LYS A 179 N ILE A 176 SSBOND 1 CYS A 173 CYS A 182 1555 1555 2.02 LINK C THR A 43 N MSE A 44 1555 1555 1.32 LINK C MSE A 44 N ASP A 45 1555 1555 1.32 LINK C HIS A 75 N MSE A 76 1555 1555 1.33 LINK C MSE A 76 N GLU A 77 1555 1555 1.31 LINK C VAL A 84 N MSE A 85 1555 1555 1.32 LINK C MSE A 85 N LEU A 86 1555 1555 1.31 LINK C GLY A 101 N MSE A 102 1555 1555 1.32 LINK C MSE A 102 N SER A 103 1555 1555 1.32 LINK C ILE A 104 N MSE A 105 1555 1555 1.32 LINK C MSE A 105 N GLN A 106 1555 1555 1.32 LINK C TYR A 180 N MSE A 181 1555 1555 1.32 LINK C MSE A 181 N CYS A 182 1555 1555 1.31 LINK C SER A 233 N MSE A 234 1555 1555 1.31 LINK C MSE A 234 N ASN A 235 1555 1555 1.31 SITE 1 AC1 7 ASP A 45 VAL A 48 GLY A 88 ARG A 90 SITE 2 AC1 7 HOH A 291 HOH A 297 HOH A 368 SITE 1 AC2 6 ASP A 81 GLY A 82 SER A 83 THR A 116 SITE 2 AC2 6 GLU A 117 ARG A 118 SITE 1 AC3 6 SER A 121 ALA A 122 VAL A 123 SER A 130 SITE 2 AC3 6 HOH A 307 HOH A 333 SITE 1 AC4 8 TRP A 55 HIS A 75 MSE A 85 GLY A 87 SITE 2 AC4 8 TRP A 178 HOH A 280 HOH A 285 HOH A 308 SITE 1 AC5 2 GLU A 144 LYS A 244 SITE 1 AC6 5 HIS A 135 HIS A 140 GLN A 141 ALA A 245 SITE 2 AC6 5 TRP A 261 SITE 1 AC7 4 SER A 125 ALA A 255 SER A 256 HOH A 338 SITE 1 AC8 3 GLU A 128 LEU A 131 HIS A 135 CRYST1 86.820 86.820 67.260 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011518 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011518 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014868 0.00000