data_3C4I # _entry.id 3C4I # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3C4I RCSB RCSB046330 WWPDB D_1000046330 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2014-05-21 _pdbx_database_PDB_obs_spr.pdb_id 4PT4 _pdbx_database_PDB_obs_spr.replace_pdb_id 3C4I _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.status_code OBS _pdbx_database_status.entry_id 3C4I _pdbx_database_status.recvd_initial_deposition_date 2008-01-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bhowmick, T.' 1 'Ramagopal, U.A.' 2 'Ghosh, S.' 3 'Nagaraja, V.' 4 'Ramakumar, S.' 5 # _citation.id primary _citation.title ;Crystal structure Analysis of N terminal region containing the dimerization domain and DNA binding domain of HU protein (Histone like protein-DNA binding) from Mycobacterium tuberculosis [H37Rv] ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bhowmick, T.' 1 primary 'Ghosh, S.' 2 primary 'Ramagopal, U.A.' 3 primary 'Nagaraja, V.' 4 primary 'Ramakumar, S.' 5 # _cell.entry_id 3C4I _cell.length_a 36.774 _cell.length_b 53.974 _cell.length_c 41.732 _cell.angle_alpha 90.00 _cell.angle_beta 97.01 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3C4I _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA-binding protein HU homolog' 10672.215 2 ? ? 'N terminal, UNP residues 1-99 (dimerization domain and DNA binding domain)' ? 2 non-polymer syn 'FORMIC ACID' 46.025 4 ? ? ? ? 3 water nat water 18.015 84 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Histone-like protein, Hlp, 21 kDa laminin-2-binding protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVARNPRTGETVKVKPTSVPAFR PGAQFKAVVSGAQRLPAEG ; _entity_poly.pdbx_seq_one_letter_code_can ;MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVARNPRTGETVKVKPTSVPAFR PGAQFKAVVSGAQRLPAEG ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASN n 1 3 LYS n 1 4 ALA n 1 5 GLU n 1 6 LEU n 1 7 ILE n 1 8 ASP n 1 9 VAL n 1 10 LEU n 1 11 THR n 1 12 GLN n 1 13 LYS n 1 14 LEU n 1 15 GLY n 1 16 SER n 1 17 ASP n 1 18 ARG n 1 19 ARG n 1 20 GLN n 1 21 ALA n 1 22 THR n 1 23 ALA n 1 24 ALA n 1 25 VAL n 1 26 GLU n 1 27 ASN n 1 28 VAL n 1 29 VAL n 1 30 ASP n 1 31 THR n 1 32 ILE n 1 33 VAL n 1 34 ARG n 1 35 ALA n 1 36 VAL n 1 37 HIS n 1 38 LYS n 1 39 GLY n 1 40 ASP n 1 41 SER n 1 42 VAL n 1 43 THR n 1 44 ILE n 1 45 THR n 1 46 GLY n 1 47 PHE n 1 48 GLY n 1 49 VAL n 1 50 PHE n 1 51 GLU n 1 52 GLN n 1 53 ARG n 1 54 ARG n 1 55 ARG n 1 56 ALA n 1 57 ALA n 1 58 ARG n 1 59 VAL n 1 60 ALA n 1 61 ARG n 1 62 ASN n 1 63 PRO n 1 64 ARG n 1 65 THR n 1 66 GLY n 1 67 GLU n 1 68 THR n 1 69 VAL n 1 70 LYS n 1 71 VAL n 1 72 LYS n 1 73 PRO n 1 74 THR n 1 75 SER n 1 76 VAL n 1 77 PRO n 1 78 ALA n 1 79 PHE n 1 80 ARG n 1 81 PRO n 1 82 GLY n 1 83 ALA n 1 84 GLN n 1 85 PHE n 1 86 LYS n 1 87 ALA n 1 88 VAL n 1 89 VAL n 1 90 SER n 1 91 GLY n 1 92 ALA n 1 93 GLN n 1 94 ARG n 1 95 LEU n 1 96 PRO n 1 97 ALA n 1 98 GLU n 1 99 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Rv2986c _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain H37Rv _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium tuberculosis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1773 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET20b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DBH_MYCTU _struct_ref.pdbx_db_accession P95109 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVARNPRTGETVKVKPTSVPAFR PGAQFKAVVSGAQRLPAEG ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3C4I A 1 ? 99 ? P95109 1 ? 99 ? 1 99 2 1 3C4I B 1 ? 99 ? P95109 1 ? 99 ? 1 99 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 FMT non-polymer . 'FORMIC ACID' ? 'C H2 O2' 46.025 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3C4I _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.93 _exptl_crystal.density_percent_sol 36.13 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.2 _exptl_crystal_grow.pdbx_details '3M Sodium formate, 0.1M Tris-Cl, pH 8.2, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2007-11-01 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double Crystal Monochromator (Cryogenically cooled)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.979 # _reflns.entry_id 3C4I _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.04 _reflns.d_resolution_low 41.4 _reflns.number_all 10292 _reflns.number_obs 10127 _reflns.percent_possible_obs 98.6 _reflns.pdbx_Rmerge_I_obs 0.092 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 14.96 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.04 _reflns_shell.d_res_low 2.12 _reflns_shell.percent_possible_all 92.9 _reflns_shell.Rmerge_I_obs 0.391 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 3.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 967 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3C4I _refine.ls_number_reflns_obs 9791 _refine.ls_number_reflns_all 10105 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 2.04 _refine.ls_percent_reflns_obs 98.44 _refine.ls_R_factor_obs 0.20797 _refine.ls_R_factor_all 0.236 _refine.ls_R_factor_R_work 0.206 _refine.ls_R_factor_R_free 0.24974 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.7 _refine.ls_number_reflns_R_free 488 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.947 _refine.correlation_coeff_Fo_to_Fc_free 0.932 _refine.B_iso_mean 25.154 _refine.aniso_B[1][1] -1.76 _refine.aniso_B[2][2] -1.15 _refine.aniso_B[3][3] 3.15 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.99 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 1P71' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.285 _refine.pdbx_overall_ESU_R_Free 0.208 _refine.overall_SU_ML 0.160 _refine.overall_SU_B 11.560 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3C4I _refine_analyze.Luzzati_coordinate_error_obs 0.264 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1465 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 84 _refine_hist.number_atoms_total 1561 _refine_hist.d_res_high 2.04 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.009 0.022 ? 1491 'X-RAY DIFFRACTION' ? r_bond_other_d 0.008 0.020 ? 1045 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.194 1.958 ? 2009 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.806 3.000 ? 2526 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.272 5.000 ? 194 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 38.581 21.803 ? 61 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.809 15.000 ? 252 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15.141 15.000 ? 20 'X-RAY DIFFRACTION' ? r_chiral_restr 0.064 0.200 ? 239 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 1660 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 308 'X-RAY DIFFRACTION' ? r_nbd_refined 0.196 0.200 ? 297 'X-RAY DIFFRACTION' ? r_nbd_other 0.205 0.200 ? 1039 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.176 0.200 ? 724 'X-RAY DIFFRACTION' ? r_nbtor_other 0.083 0.200 ? 884 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.159 0.200 ? 62 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.200 0.200 ? 15 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.272 0.200 ? 80 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.186 0.200 ? 11 'X-RAY DIFFRACTION' ? r_mcbond_it 1.008 1.500 ? 1044 'X-RAY DIFFRACTION' ? r_mcbond_other 0.105 1.500 ? 399 'X-RAY DIFFRACTION' ? r_mcangle_it 1.067 2.000 ? 1567 'X-RAY DIFFRACTION' ? r_scbond_it 1.774 3.000 ? 528 'X-RAY DIFFRACTION' ? r_scangle_it 2.929 4.500 ? 442 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso 1 A 1235 0.59 5.00 'loose positional' 1 'X-RAY DIFFRACTION' 1 ? ? ? 1 A 1235 1.87 10.00 'loose thermal' 1 'X-RAY DIFFRACTION' 2 ? ? ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.038 _refine_ls_shell.d_res_low 2.090 _refine_ls_shell.number_reflns_R_work 622 _refine_ls_shell.R_factor_R_work 0.24 _refine_ls_shell.percent_reflns_obs 87.22 _refine_ls_shell.R_factor_R_free 0.262 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 33 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B # loop_ _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.selection_details 1 A 1 A 96 1 6 A MET 1 ? A PRO 96 ? 1 ? 2 B 1 B 96 1 6 B MET 1 ? B PRO 96 ? 1 ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 3C4I _struct.title ;Crystal structure Analysis of N terminal region containing the dimerization domain and DNA binding domain of HU protein(Histone like protein-DNA binding) from Mycobacterium tuberculosis [H37Rv] ; _struct.pdbx_descriptor 'DNA-binding protein HU homolog' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3C4I _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' _struct_keywords.text 'DIMERIZATION BY FOUR HELIX BUNDLE INTERACTION, DNA condensation, DNA-binding, DNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 2 ? GLY A 15 ? ASN A 2 GLY A 15 1 ? 14 HELX_P HELX_P2 2 ASP A 17 ? LYS A 38 ? ASP A 17 LYS A 38 1 ? 22 HELX_P HELX_P3 3 GLY A 82 ? SER A 90 ? GLY A 82 SER A 90 1 ? 9 HELX_P HELX_P4 4 ASN B 2 ? GLY B 15 ? ASN B 2 GLY B 15 1 ? 14 HELX_P HELX_P5 5 ASP B 17 ? LYS B 38 ? ASP B 17 LYS B 38 1 ? 22 HELX_P HELX_P6 6 GLY B 82 ? SER B 90 ? GLY B 82 SER B 90 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? C ? 3 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 42 ? ILE A 44 ? VAL A 42 ILE A 44 A 2 GLY A 48 ? ARG A 55 ? GLY A 48 ARG A 55 A 3 THR A 74 ? PRO A 81 ? THR A 74 PRO A 81 B 1 ARG A 58 ? ARG A 61 ? ARG A 58 ARG A 61 B 2 THR A 68 ? VAL A 71 ? THR A 68 VAL A 71 C 1 VAL B 42 ? ILE B 44 ? VAL B 42 ILE B 44 C 2 GLY B 48 ? ARG B 55 ? GLY B 48 ARG B 55 C 3 THR B 74 ? PRO B 81 ? THR B 74 PRO B 81 D 1 ARG B 58 ? ARG B 61 ? ARG B 58 ARG B 61 D 2 THR B 68 ? VAL B 71 ? THR B 68 VAL B 71 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 42 ? N VAL A 42 O PHE A 50 ? O PHE A 50 A 2 3 N ARG A 53 ? N ARG A 53 O VAL A 76 ? O VAL A 76 B 1 2 N ALA A 60 ? N ALA A 60 O VAL A 69 ? O VAL A 69 C 1 2 N VAL B 42 ? N VAL B 42 O PHE B 50 ? O PHE B 50 C 2 3 N ARG B 53 ? N ARG B 53 O VAL B 76 ? O VAL B 76 D 1 2 N ARG B 58 ? N ARG B 58 O VAL B 71 ? O VAL B 71 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE FMT A 100' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE FMT B 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 ARG B 53 ? ARG B 53 . ? 1_655 ? 2 AC1 2 ARG B 54 ? ARG B 54 . ? 1_655 ? 3 AC2 4 ARG B 55 ? ARG B 55 . ? 1_555 ? 4 AC2 4 ARG B 58 ? ARG B 58 . ? 1_555 ? 5 AC2 4 LYS B 72 ? LYS B 72 . ? 1_555 ? 6 AC2 4 THR B 74 ? THR B 74 . ? 1_555 ? # _database_PDB_matrix.entry_id 3C4I _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3C4I _atom_sites.fract_transf_matrix[1][1] 0.027193 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003342 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018527 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024143 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ASN 2 2 2 ASN ASN A . n A 1 3 LYS 3 3 3 LYS LYS A . n A 1 4 ALA 4 4 4 ALA ALA A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 ASP 8 8 8 ASP ASP A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 GLN 12 12 12 GLN GLN A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 ARG 18 18 18 ARG ARG A . n A 1 19 ARG 19 19 19 ARG ARG A . n A 1 20 GLN 20 20 20 GLN GLN A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 HIS 37 37 37 HIS HIS A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 PHE 47 47 47 PHE PHE A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 PHE 50 50 50 PHE PHE A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 GLN 52 52 52 GLN GLN A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 ARG 55 55 55 ARG ARG A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 ARG 58 58 58 ARG ARG A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 ASN 62 62 62 ASN ASN A . n A 1 63 PRO 63 63 63 PRO PRO A . n A 1 64 ARG 64 64 64 ARG ARG A . n A 1 65 THR 65 65 65 THR THR A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 THR 68 68 68 THR THR A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 PRO 73 73 73 PRO PRO A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 SER 75 75 75 SER SER A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 PRO 77 77 77 PRO PRO A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 PHE 79 79 79 PHE PHE A . n A 1 80 ARG 80 80 80 ARG ARG A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 GLN 84 84 84 GLN GLN A . n A 1 85 PHE 85 85 85 PHE PHE A . n A 1 86 LYS 86 86 86 LYS LYS A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 GLY 91 91 91 GLY GLY A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 GLN 93 93 93 GLN GLN A . n A 1 94 ARG 94 94 94 ARG ARG A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 PRO 96 96 96 PRO PRO A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 GLU 98 98 98 GLU GLU A . n A 1 99 GLY 99 99 99 GLY GLY A . n B 1 1 MET 1 1 1 MET MET B . n B 1 2 ASN 2 2 2 ASN ASN B . n B 1 3 LYS 3 3 3 LYS LYS B . n B 1 4 ALA 4 4 4 ALA ALA B . n B 1 5 GLU 5 5 5 GLU GLU B . n B 1 6 LEU 6 6 6 LEU LEU B . n B 1 7 ILE 7 7 7 ILE ILE B . n B 1 8 ASP 8 8 8 ASP ASP B . n B 1 9 VAL 9 9 9 VAL VAL B . n B 1 10 LEU 10 10 10 LEU LEU B . n B 1 11 THR 11 11 11 THR THR B . n B 1 12 GLN 12 12 12 GLN GLN B . n B 1 13 LYS 13 13 13 LYS LYS B . n B 1 14 LEU 14 14 14 LEU LEU B . n B 1 15 GLY 15 15 15 GLY GLY B . n B 1 16 SER 16 16 16 SER SER B . n B 1 17 ASP 17 17 17 ASP ASP B . n B 1 18 ARG 18 18 18 ARG ARG B . n B 1 19 ARG 19 19 19 ARG ARG B . n B 1 20 GLN 20 20 20 GLN GLN B . n B 1 21 ALA 21 21 21 ALA ALA B . n B 1 22 THR 22 22 22 THR THR B . n B 1 23 ALA 23 23 23 ALA ALA B . n B 1 24 ALA 24 24 24 ALA ALA B . n B 1 25 VAL 25 25 25 VAL VAL B . n B 1 26 GLU 26 26 26 GLU GLU B . n B 1 27 ASN 27 27 27 ASN ASN B . n B 1 28 VAL 28 28 28 VAL VAL B . n B 1 29 VAL 29 29 29 VAL VAL B . n B 1 30 ASP 30 30 30 ASP ASP B . n B 1 31 THR 31 31 31 THR THR B . n B 1 32 ILE 32 32 32 ILE ILE B . n B 1 33 VAL 33 33 33 VAL VAL B . n B 1 34 ARG 34 34 34 ARG ARG B . n B 1 35 ALA 35 35 35 ALA ALA B . n B 1 36 VAL 36 36 36 VAL VAL B . n B 1 37 HIS 37 37 37 HIS HIS B . n B 1 38 LYS 38 38 38 LYS LYS B . n B 1 39 GLY 39 39 39 GLY GLY B . n B 1 40 ASP 40 40 40 ASP ASP B . n B 1 41 SER 41 41 41 SER SER B . n B 1 42 VAL 42 42 42 VAL VAL B . n B 1 43 THR 43 43 43 THR THR B . n B 1 44 ILE 44 44 44 ILE ILE B . n B 1 45 THR 45 45 45 THR THR B . n B 1 46 GLY 46 46 46 GLY GLY B . n B 1 47 PHE 47 47 47 PHE PHE B . n B 1 48 GLY 48 48 48 GLY GLY B . n B 1 49 VAL 49 49 49 VAL VAL B . n B 1 50 PHE 50 50 50 PHE PHE B . n B 1 51 GLU 51 51 51 GLU GLU B . n B 1 52 GLN 52 52 52 GLN GLN B . n B 1 53 ARG 53 53 53 ARG ARG B . n B 1 54 ARG 54 54 54 ARG ARG B . n B 1 55 ARG 55 55 55 ARG ARG B . n B 1 56 ALA 56 56 56 ALA ALA B . n B 1 57 ALA 57 57 57 ALA ALA B . n B 1 58 ARG 58 58 58 ARG ARG B . n B 1 59 VAL 59 59 59 VAL VAL B . n B 1 60 ALA 60 60 60 ALA ALA B . n B 1 61 ARG 61 61 61 ARG ARG B . n B 1 62 ASN 62 62 62 ASN ASN B . n B 1 63 PRO 63 63 63 PRO PRO B . n B 1 64 ARG 64 64 64 ARG ARG B . n B 1 65 THR 65 65 65 THR THR B . n B 1 66 GLY 66 66 66 GLY GLY B . n B 1 67 GLU 67 67 67 GLU GLU B . n B 1 68 THR 68 68 68 THR THR B . n B 1 69 VAL 69 69 69 VAL VAL B . n B 1 70 LYS 70 70 70 LYS LYS B . n B 1 71 VAL 71 71 71 VAL VAL B . n B 1 72 LYS 72 72 72 LYS LYS B . n B 1 73 PRO 73 73 73 PRO PRO B . n B 1 74 THR 74 74 74 THR THR B . n B 1 75 SER 75 75 75 SER SER B . n B 1 76 VAL 76 76 76 VAL VAL B . n B 1 77 PRO 77 77 77 PRO PRO B . n B 1 78 ALA 78 78 78 ALA ALA B . n B 1 79 PHE 79 79 79 PHE PHE B . n B 1 80 ARG 80 80 80 ARG ARG B . n B 1 81 PRO 81 81 81 PRO PRO B . n B 1 82 GLY 82 82 82 GLY GLY B . n B 1 83 ALA 83 83 83 ALA ALA B . n B 1 84 GLN 84 84 84 GLN GLN B . n B 1 85 PHE 85 85 85 PHE PHE B . n B 1 86 LYS 86 86 86 LYS LYS B . n B 1 87 ALA 87 87 87 ALA ALA B . n B 1 88 VAL 88 88 88 VAL VAL B . n B 1 89 VAL 89 89 89 VAL VAL B . n B 1 90 SER 90 90 90 SER SER B . n B 1 91 GLY 91 91 91 GLY GLY B . n B 1 92 ALA 92 92 92 ALA ALA B . n B 1 93 GLN 93 93 93 GLN GLN B . n B 1 94 ARG 94 94 94 ARG ARG B . n B 1 95 LEU 95 95 95 LEU LEU B . n B 1 96 PRO 96 96 96 PRO PRO B . n B 1 97 ALA 97 97 97 ALA ALA B . n B 1 98 GLU 98 98 ? ? ? B . n B 1 99 GLY 99 99 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FMT 1 100 1 FMT FMT A . D 2 FMT 1 101 1 FMT FMT A . E 2 FMT 1 100 1 FMT FMT B . F 2 FMT 1 101 1 FMT FMT B . G 3 HOH 1 102 1 HOH HOH A . G 3 HOH 2 103 5 HOH HOH A . G 3 HOH 3 104 7 HOH HOH A . G 3 HOH 4 105 9 HOH HOH A . G 3 HOH 5 106 12 HOH HOH A . G 3 HOH 6 107 13 HOH HOH A . G 3 HOH 7 108 14 HOH HOH A . G 3 HOH 8 109 15 HOH HOH A . G 3 HOH 9 110 17 HOH HOH A . G 3 HOH 10 111 18 HOH HOH A . G 3 HOH 11 112 19 HOH HOH A . G 3 HOH 12 113 21 HOH HOH A . G 3 HOH 13 114 22 HOH HOH A . G 3 HOH 14 115 26 HOH HOH A . G 3 HOH 15 116 27 HOH HOH A . G 3 HOH 16 117 30 HOH HOH A . G 3 HOH 17 118 31 HOH HOH A . G 3 HOH 18 119 33 HOH HOH A . G 3 HOH 19 120 35 HOH HOH A . G 3 HOH 20 121 37 HOH HOH A . G 3 HOH 21 122 38 HOH HOH A . G 3 HOH 22 123 39 HOH HOH A . G 3 HOH 23 124 42 HOH HOH A . G 3 HOH 24 125 43 HOH HOH A . G 3 HOH 25 126 44 HOH HOH A . G 3 HOH 26 127 45 HOH HOH A . G 3 HOH 27 128 47 HOH HOH A . G 3 HOH 28 129 48 HOH HOH A . G 3 HOH 29 130 50 HOH HOH A . G 3 HOH 30 131 53 HOH HOH A . G 3 HOH 31 132 56 HOH HOH A . G 3 HOH 32 133 57 HOH HOH A . G 3 HOH 33 134 61 HOH HOH A . G 3 HOH 34 135 63 HOH HOH A . G 3 HOH 35 136 65 HOH HOH A . G 3 HOH 36 137 66 HOH HOH A . G 3 HOH 37 138 67 HOH HOH A . G 3 HOH 38 139 69 HOH HOH A . G 3 HOH 39 140 70 HOH HOH A . G 3 HOH 40 141 74 HOH HOH A . G 3 HOH 41 142 77 HOH HOH A . G 3 HOH 42 143 79 HOH HOH A . G 3 HOH 43 144 81 HOH HOH A . G 3 HOH 44 145 83 HOH HOH A . G 3 HOH 45 146 84 HOH HOH A . H 3 HOH 1 102 2 HOH HOH B . H 3 HOH 2 103 3 HOH HOH B . H 3 HOH 3 104 4 HOH HOH B . H 3 HOH 4 105 6 HOH HOH B . H 3 HOH 5 106 8 HOH HOH B . H 3 HOH 6 107 10 HOH HOH B . H 3 HOH 7 108 11 HOH HOH B . H 3 HOH 8 109 16 HOH HOH B . H 3 HOH 9 110 20 HOH HOH B . H 3 HOH 10 111 23 HOH HOH B . H 3 HOH 11 112 24 HOH HOH B . H 3 HOH 12 113 25 HOH HOH B . H 3 HOH 13 114 28 HOH HOH B . H 3 HOH 14 115 29 HOH HOH B . H 3 HOH 15 116 32 HOH HOH B . H 3 HOH 16 117 34 HOH HOH B . H 3 HOH 17 118 36 HOH HOH B . H 3 HOH 18 119 40 HOH HOH B . H 3 HOH 19 120 41 HOH HOH B . H 3 HOH 20 121 46 HOH HOH B . H 3 HOH 21 122 49 HOH HOH B . H 3 HOH 22 123 51 HOH HOH B . H 3 HOH 23 124 52 HOH HOH B . H 3 HOH 24 125 54 HOH HOH B . H 3 HOH 25 126 55 HOH HOH B . H 3 HOH 26 127 58 HOH HOH B . H 3 HOH 27 128 59 HOH HOH B . H 3 HOH 28 129 60 HOH HOH B . H 3 HOH 29 130 62 HOH HOH B . H 3 HOH 30 131 64 HOH HOH B . H 3 HOH 31 132 68 HOH HOH B . H 3 HOH 32 133 71 HOH HOH B . H 3 HOH 33 134 72 HOH HOH B . H 3 HOH 34 135 73 HOH HOH B . H 3 HOH 35 136 75 HOH HOH B . H 3 HOH 36 137 76 HOH HOH B . H 3 HOH 37 138 78 HOH HOH B . H 3 HOH 38 139 80 HOH HOH B . H 3 HOH 39 140 82 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4350 ? 1 MORE -38 ? 1 'SSA (A^2)' 11770 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-02-03 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2014-05-21 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 3 'Structure model' repository Obsolete ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 16.1379 9.0570 -2.5703 0.0160 -0.0341 -0.0515 -0.0056 0.0059 -0.0079 1.2114 0.0919 0.5520 -0.1013 0.4582 -0.1378 0.0021 0.0485 -0.0110 0.0027 0.0198 -0.0148 0.0068 0.0391 -0.0219 'X-RAY DIFFRACTION' 2 ? refined 15.7512 6.0868 2.8527 -0.0030 -0.0439 -0.0324 -0.0106 0.0048 -0.0004 1.6125 0.2499 0.5955 -0.2752 -0.3035 0.1276 -0.0492 -0.0602 0.0101 0.0213 0.0320 0.0190 0.0290 0.0309 0.0172 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 1 A 1 A 99 A 99 ? 'X-RAY DIFFRACTION' ? 2 2 B 1 B 1 B 97 B 97 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 CBASS 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 PHASER phasing . ? 5 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ALA _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 57 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 70.23 _pdbx_validate_torsion.psi 37.96 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 93 ? CG ? A GLN 93 CG 2 1 Y 1 A GLN 93 ? CD ? A GLN 93 CD 3 1 Y 1 A GLN 93 ? OE1 ? A GLN 93 OE1 4 1 Y 1 A GLN 93 ? NE2 ? A GLN 93 NE2 5 1 Y 1 A ARG 94 ? CG ? A ARG 94 CG 6 1 Y 1 A ARG 94 ? CD ? A ARG 94 CD 7 1 Y 1 A ARG 94 ? NE ? A ARG 94 NE 8 1 Y 1 A ARG 94 ? CZ ? A ARG 94 CZ 9 1 Y 1 A ARG 94 ? NH1 ? A ARG 94 NH1 10 1 Y 1 A ARG 94 ? NH2 ? A ARG 94 NH2 11 1 Y 1 B GLN 93 ? CG ? B GLN 93 CG 12 1 Y 1 B GLN 93 ? CD ? B GLN 93 CD 13 1 Y 1 B GLN 93 ? OE1 ? B GLN 93 OE1 14 1 Y 1 B GLN 93 ? NE2 ? B GLN 93 NE2 15 1 Y 1 B ARG 94 ? CG ? B ARG 94 CG 16 1 Y 1 B ARG 94 ? CD ? B ARG 94 CD 17 1 Y 1 B ARG 94 ? NE ? B ARG 94 NE 18 1 Y 1 B ARG 94 ? CZ ? B ARG 94 CZ 19 1 Y 1 B ARG 94 ? NH1 ? B ARG 94 NH1 20 1 Y 1 B ARG 94 ? NH2 ? B ARG 94 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B GLU 98 ? B GLU 98 2 1 Y 1 B GLY 99 ? B GLY 99 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FORMIC ACID' FMT 3 water HOH #