data_3C5K # _entry.id 3C5K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3C5K pdb_00003c5k 10.2210/pdb3c5k/pdb RCSB RCSB046368 ? ? WWPDB D_1000046368 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-02-19 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' struct_ref_seq_dif 5 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3C5K _pdbx_database_status.recvd_initial_deposition_date 2008-01-31 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Dong, A.' 1 'Ravichandran, M.' 2 'Schuetz, A.' 3 'Loppnau, P.' 4 'Li, Y.' 5 'MacKenzie, F.' 6 'Kozieradzki, I.' 7 'Edwards, A.M.' 8 'Arrowsmith, C.H.' 9 'Weigelt, J.' 10 'Bountra, C.' 11 'Bochkarev, A.' 12 'Dhe-Paganon, S.' 13 'Min, J.' 14 'Ouyang, H.' 15 'Structural Genomics Consortium (SGC)' 16 # _citation.id primary _citation.title 'Crystal Structure of Human HDAC6 zinc finger domain.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Dong, A.' 1 ? primary 'Ravichandran, M.' 2 ? primary 'Schuetz, A.' 3 ? primary 'Loppnau, P.' 4 ? primary 'Li, Y.' 5 ? primary 'MacKenzie, F.' 6 ? primary 'Kozieradzki, I.' 7 ? primary 'Edwards, A.M.' 8 ? primary 'Arrowsmith, C.H.' 9 ? primary 'Weigelt, J.' 10 ? primary 'Bountra, C.' 11 ? primary 'Bochkarev, A.' 12 ? primary 'Dhe-Paganon, S.' 13 ? primary 'Min, J.' 14 ? primary 'Ouyang, H.' 15 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Histone deacetylase 6' 12167.869 1 ? ? 'Residues 1109-1215' ? 2 non-polymer syn 'ZINC ION' 65.409 3 ? ? ? ? 3 water nat water 18.015 156 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name HD6 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSPLPWCPHLVAVCPIPAAGLDVTQPCGDCGTIQENWVCLSCYQVYCGRYINGHMLQHHGNSGHPLVLSYIDLSAWCYYC QAYVHHQALLDVKNIAHQNKFGEDMPHPH ; _entity_poly.pdbx_seq_one_letter_code_can ;GSPLPWCPHLVAVCPIPAAGLDVTQPCGDCGTIQENWVCLSCYQVYCGRYINGHMLQHHGNSGHPLVLSYIDLSAWCYYC QAYVHHQALLDVKNIAHQNKFGEDMPHPH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 PRO n 1 4 LEU n 1 5 PRO n 1 6 TRP n 1 7 CYS n 1 8 PRO n 1 9 HIS n 1 10 LEU n 1 11 VAL n 1 12 ALA n 1 13 VAL n 1 14 CYS n 1 15 PRO n 1 16 ILE n 1 17 PRO n 1 18 ALA n 1 19 ALA n 1 20 GLY n 1 21 LEU n 1 22 ASP n 1 23 VAL n 1 24 THR n 1 25 GLN n 1 26 PRO n 1 27 CYS n 1 28 GLY n 1 29 ASP n 1 30 CYS n 1 31 GLY n 1 32 THR n 1 33 ILE n 1 34 GLN n 1 35 GLU n 1 36 ASN n 1 37 TRP n 1 38 VAL n 1 39 CYS n 1 40 LEU n 1 41 SER n 1 42 CYS n 1 43 TYR n 1 44 GLN n 1 45 VAL n 1 46 TYR n 1 47 CYS n 1 48 GLY n 1 49 ARG n 1 50 TYR n 1 51 ILE n 1 52 ASN n 1 53 GLY n 1 54 HIS n 1 55 MET n 1 56 LEU n 1 57 GLN n 1 58 HIS n 1 59 HIS n 1 60 GLY n 1 61 ASN n 1 62 SER n 1 63 GLY n 1 64 HIS n 1 65 PRO n 1 66 LEU n 1 67 VAL n 1 68 LEU n 1 69 SER n 1 70 TYR n 1 71 ILE n 1 72 ASP n 1 73 LEU n 1 74 SER n 1 75 ALA n 1 76 TRP n 1 77 CYS n 1 78 TYR n 1 79 TYR n 1 80 CYS n 1 81 GLN n 1 82 ALA n 1 83 TYR n 1 84 VAL n 1 85 HIS n 1 86 HIS n 1 87 GLN n 1 88 ALA n 1 89 LEU n 1 90 LEU n 1 91 ASP n 1 92 VAL n 1 93 LYS n 1 94 ASN n 1 95 ILE n 1 96 ALA n 1 97 HIS n 1 98 GLN n 1 99 ASN n 1 100 LYS n 1 101 PHE n 1 102 GLY n 1 103 GLU n 1 104 ASP n 1 105 MET n 1 106 PRO n 1 107 HIS n 1 108 PRO n 1 109 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene HDAC6 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 Rosetta-R3' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15-MHL _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? A . n A 1 2 SER 2 0 0 SER SER A . n A 1 3 PRO 3 1 1 PRO PRO A . n A 1 4 LEU 4 2 2 LEU LEU A . n A 1 5 PRO 5 3 3 PRO PRO A . n A 1 6 TRP 6 4 4 TRP TRP A . n A 1 7 CYS 7 5 5 CYS CYS A . n A 1 8 PRO 8 6 6 PRO PRO A . n A 1 9 HIS 9 7 7 HIS HIS A . n A 1 10 LEU 10 8 8 LEU LEU A . n A 1 11 VAL 11 9 9 VAL VAL A . n A 1 12 ALA 12 10 10 ALA ALA A . n A 1 13 VAL 13 11 11 VAL VAL A . n A 1 14 CYS 14 12 12 CYS CYS A . n A 1 15 PRO 15 13 13 PRO PRO A . n A 1 16 ILE 16 14 14 ILE ILE A . n A 1 17 PRO 17 15 15 PRO PRO A . n A 1 18 ALA 18 16 16 ALA ALA A . n A 1 19 ALA 19 17 17 ALA ALA A . n A 1 20 GLY 20 18 18 GLY GLY A . n A 1 21 LEU 21 19 19 LEU LEU A . n A 1 22 ASP 22 20 20 ASP ASP A . n A 1 23 VAL 23 21 21 VAL VAL A . n A 1 24 THR 24 22 22 THR THR A . n A 1 25 GLN 25 23 23 GLN GLN A . n A 1 26 PRO 26 24 24 PRO PRO A . n A 1 27 CYS 27 25 25 CYS CYS A . n A 1 28 GLY 28 26 26 GLY GLY A . n A 1 29 ASP 29 27 27 ASP ASP A . n A 1 30 CYS 30 28 28 CYS CYS A . n A 1 31 GLY 31 29 29 GLY GLY A . n A 1 32 THR 32 30 30 THR THR A . n A 1 33 ILE 33 31 31 ILE ILE A . n A 1 34 GLN 34 32 32 GLN GLN A . n A 1 35 GLU 35 33 33 GLU GLU A . n A 1 36 ASN 36 34 34 ASN ASN A . n A 1 37 TRP 37 35 35 TRP TRP A . n A 1 38 VAL 38 36 36 VAL VAL A . n A 1 39 CYS 39 37 37 CYS CYS A . n A 1 40 LEU 40 38 38 LEU LEU A . n A 1 41 SER 41 39 39 SER SER A . n A 1 42 CYS 42 40 40 CYS CYS A . n A 1 43 TYR 43 41 41 TYR TYR A . n A 1 44 GLN 44 42 42 GLN GLN A . n A 1 45 VAL 45 43 43 VAL VAL A . n A 1 46 TYR 46 44 44 TYR TYR A . n A 1 47 CYS 47 45 45 CYS CYS A . n A 1 48 GLY 48 46 46 GLY GLY A . n A 1 49 ARG 49 47 47 ARG ARG A . n A 1 50 TYR 50 48 48 TYR TYR A . n A 1 51 ILE 51 49 49 ILE ILE A . n A 1 52 ASN 52 50 50 ASN ASN A . n A 1 53 GLY 53 51 51 GLY GLY A . n A 1 54 HIS 54 52 52 HIS HIS A . n A 1 55 MET 55 53 53 MET MET A . n A 1 56 LEU 56 54 54 LEU LEU A . n A 1 57 GLN 57 55 55 GLN GLN A . n A 1 58 HIS 58 56 56 HIS HIS A . n A 1 59 HIS 59 57 57 HIS HIS A . n A 1 60 GLY 60 58 58 GLY GLY A . n A 1 61 ASN 61 59 59 ASN ASN A . n A 1 62 SER 62 60 60 SER SER A . n A 1 63 GLY 63 61 61 GLY GLY A . n A 1 64 HIS 64 62 62 HIS HIS A . n A 1 65 PRO 65 63 63 PRO PRO A . n A 1 66 LEU 66 64 64 LEU LEU A . n A 1 67 VAL 67 65 65 VAL VAL A . n A 1 68 LEU 68 66 66 LEU LEU A . n A 1 69 SER 69 67 67 SER SER A . n A 1 70 TYR 70 68 68 TYR TYR A . n A 1 71 ILE 71 69 69 ILE ILE A . n A 1 72 ASP 72 70 70 ASP ASP A . n A 1 73 LEU 73 71 71 LEU LEU A . n A 1 74 SER 74 72 72 SER SER A . n A 1 75 ALA 75 73 73 ALA ALA A . n A 1 76 TRP 76 74 74 TRP TRP A . n A 1 77 CYS 77 75 75 CYS CYS A . n A 1 78 TYR 78 76 76 TYR TYR A . n A 1 79 TYR 79 77 77 TYR TYR A . n A 1 80 CYS 80 78 78 CYS CYS A . n A 1 81 GLN 81 79 79 GLN GLN A . n A 1 82 ALA 82 80 80 ALA ALA A . n A 1 83 TYR 83 81 81 TYR TYR A . n A 1 84 VAL 84 82 82 VAL VAL A . n A 1 85 HIS 85 83 83 HIS HIS A . n A 1 86 HIS 86 84 84 HIS HIS A . n A 1 87 GLN 87 85 85 GLN GLN A . n A 1 88 ALA 88 86 86 ALA ALA A . n A 1 89 LEU 89 87 87 LEU LEU A . n A 1 90 LEU 90 88 88 LEU LEU A . n A 1 91 ASP 91 89 89 ASP ASP A . n A 1 92 VAL 92 90 90 VAL VAL A . n A 1 93 LYS 93 91 91 LYS LYS A . n A 1 94 ASN 94 92 92 ASN ASN A . n A 1 95 ILE 95 93 93 ILE ILE A . n A 1 96 ALA 96 94 94 ALA ALA A . n A 1 97 HIS 97 95 95 HIS HIS A . n A 1 98 GLN 98 96 96 GLN GLN A . n A 1 99 ASN 99 97 97 ASN ASN A . n A 1 100 LYS 100 98 98 LYS LYS A . n A 1 101 PHE 101 99 99 PHE PHE A . n A 1 102 GLY 102 100 100 GLY GLY A . n A 1 103 GLU 103 101 101 GLU GLU A . n A 1 104 ASP 104 102 102 ASP ASP A . n A 1 105 MET 105 103 103 MET MET A . n A 1 106 PRO 106 104 104 PRO PRO A . n A 1 107 HIS 107 105 105 HIS HIS A . n A 1 108 PRO 108 106 106 PRO PRO A . n A 1 109 HIS 109 107 107 HIS HIS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 201 1000 ZN ZN A . C 2 ZN 1 202 1001 ZN ZN A . D 2 ZN 1 203 1002 ZN ZN A . E 3 HOH 1 204 1 HOH HOH A . E 3 HOH 2 205 2 HOH HOH A . E 3 HOH 3 206 3 HOH HOH A . E 3 HOH 4 207 4 HOH HOH A . E 3 HOH 5 208 5 HOH HOH A . E 3 HOH 6 209 6 HOH HOH A . E 3 HOH 7 210 7 HOH HOH A . E 3 HOH 8 211 8 HOH HOH A . E 3 HOH 9 212 9 HOH HOH A . E 3 HOH 10 213 10 HOH HOH A . E 3 HOH 11 214 11 HOH HOH A . E 3 HOH 12 215 12 HOH HOH A . E 3 HOH 13 216 13 HOH HOH A . E 3 HOH 14 217 14 HOH HOH A . E 3 HOH 15 218 15 HOH HOH A . E 3 HOH 16 219 16 HOH HOH A . E 3 HOH 17 220 17 HOH HOH A . E 3 HOH 18 221 18 HOH HOH A . E 3 HOH 19 222 19 HOH HOH A . E 3 HOH 20 223 20 HOH HOH A . E 3 HOH 21 224 21 HOH HOH A . E 3 HOH 22 225 22 HOH HOH A . E 3 HOH 23 226 23 HOH HOH A . E 3 HOH 24 227 24 HOH HOH A . E 3 HOH 25 228 25 HOH HOH A . E 3 HOH 26 229 26 HOH HOH A . E 3 HOH 27 230 27 HOH HOH A . E 3 HOH 28 231 28 HOH HOH A . E 3 HOH 29 232 29 HOH HOH A . E 3 HOH 30 233 30 HOH HOH A . E 3 HOH 31 234 31 HOH HOH A . E 3 HOH 32 235 32 HOH HOH A . E 3 HOH 33 236 33 HOH HOH A . E 3 HOH 34 237 34 HOH HOH A . E 3 HOH 35 238 35 HOH HOH A . E 3 HOH 36 239 36 HOH HOH A . E 3 HOH 37 240 37 HOH HOH A . E 3 HOH 38 241 38 HOH HOH A . E 3 HOH 39 242 39 HOH HOH A . E 3 HOH 40 243 40 HOH HOH A . E 3 HOH 41 244 41 HOH HOH A . E 3 HOH 42 245 42 HOH HOH A . E 3 HOH 43 246 43 HOH HOH A . E 3 HOH 44 247 44 HOH HOH A . E 3 HOH 45 248 45 HOH HOH A . E 3 HOH 46 249 46 HOH HOH A . E 3 HOH 47 250 47 HOH HOH A . E 3 HOH 48 251 48 HOH HOH A . E 3 HOH 49 252 49 HOH HOH A . E 3 HOH 50 253 50 HOH HOH A . E 3 HOH 51 254 51 HOH HOH A . E 3 HOH 52 255 52 HOH HOH A . E 3 HOH 53 256 53 HOH HOH A . E 3 HOH 54 257 54 HOH HOH A . E 3 HOH 55 258 55 HOH HOH A . E 3 HOH 56 259 56 HOH HOH A . E 3 HOH 57 260 57 HOH HOH A . E 3 HOH 58 261 58 HOH HOH A . E 3 HOH 59 262 59 HOH HOH A . E 3 HOH 60 263 60 HOH HOH A . E 3 HOH 61 264 61 HOH HOH A . E 3 HOH 62 265 62 HOH HOH A . E 3 HOH 63 266 63 HOH HOH A . E 3 HOH 64 267 64 HOH HOH A . E 3 HOH 65 268 65 HOH HOH A . E 3 HOH 66 269 66 HOH HOH A . E 3 HOH 67 270 67 HOH HOH A . E 3 HOH 68 271 68 HOH HOH A . E 3 HOH 69 272 69 HOH HOH A . E 3 HOH 70 273 70 HOH HOH A . E 3 HOH 71 274 71 HOH HOH A . E 3 HOH 72 275 72 HOH HOH A . E 3 HOH 73 276 73 HOH HOH A . E 3 HOH 74 277 74 HOH HOH A . E 3 HOH 75 278 75 HOH HOH A . E 3 HOH 76 279 76 HOH HOH A . E 3 HOH 77 280 77 HOH HOH A . E 3 HOH 78 281 78 HOH HOH A . E 3 HOH 79 282 79 HOH HOH A . E 3 HOH 80 283 80 HOH HOH A . E 3 HOH 81 284 81 HOH HOH A . E 3 HOH 82 285 82 HOH HOH A . E 3 HOH 83 286 83 HOH HOH A . E 3 HOH 84 287 84 HOH HOH A . E 3 HOH 85 288 85 HOH HOH A . E 3 HOH 86 289 86 HOH HOH A . E 3 HOH 87 290 87 HOH HOH A . E 3 HOH 88 291 89 HOH HOH A . E 3 HOH 89 292 90 HOH HOH A . E 3 HOH 90 293 91 HOH HOH A . E 3 HOH 91 294 92 HOH HOH A . E 3 HOH 92 295 93 HOH HOH A . E 3 HOH 93 296 94 HOH HOH A . E 3 HOH 94 297 95 HOH HOH A . E 3 HOH 95 298 96 HOH HOH A . E 3 HOH 96 299 97 HOH HOH A . E 3 HOH 97 300 98 HOH HOH A . E 3 HOH 98 301 99 HOH HOH A . E 3 HOH 99 302 100 HOH HOH A . E 3 HOH 100 303 101 HOH HOH A . E 3 HOH 101 304 103 HOH HOH A . E 3 HOH 102 305 104 HOH HOH A . E 3 HOH 103 306 105 HOH HOH A . E 3 HOH 104 307 106 HOH HOH A . E 3 HOH 105 308 107 HOH HOH A . E 3 HOH 106 309 108 HOH HOH A . E 3 HOH 107 310 109 HOH HOH A . E 3 HOH 108 311 110 HOH HOH A . E 3 HOH 109 312 111 HOH HOH A . E 3 HOH 110 313 112 HOH HOH A . E 3 HOH 111 314 113 HOH HOH A . E 3 HOH 112 315 114 HOH HOH A . E 3 HOH 113 316 115 HOH HOH A . E 3 HOH 114 317 116 HOH HOH A . E 3 HOH 115 318 117 HOH HOH A . E 3 HOH 116 319 118 HOH HOH A . E 3 HOH 117 320 119 HOH HOH A . E 3 HOH 118 321 120 HOH HOH A . E 3 HOH 119 322 121 HOH HOH A . E 3 HOH 120 323 122 HOH HOH A . E 3 HOH 121 324 123 HOH HOH A . E 3 HOH 122 325 125 HOH HOH A . E 3 HOH 123 326 126 HOH HOH A . E 3 HOH 124 327 127 HOH HOH A . E 3 HOH 125 328 128 HOH HOH A . E 3 HOH 126 329 129 HOH HOH A . E 3 HOH 127 330 130 HOH HOH A . E 3 HOH 128 331 131 HOH HOH A . E 3 HOH 129 332 132 HOH HOH A . E 3 HOH 130 333 133 HOH HOH A . E 3 HOH 131 334 134 HOH HOH A . E 3 HOH 132 335 135 HOH HOH A . E 3 HOH 133 336 136 HOH HOH A . E 3 HOH 134 337 137 HOH HOH A . E 3 HOH 135 338 138 HOH HOH A . E 3 HOH 136 339 139 HOH HOH A . E 3 HOH 137 340 140 HOH HOH A . E 3 HOH 138 341 141 HOH HOH A . E 3 HOH 139 342 142 HOH HOH A . E 3 HOH 140 343 143 HOH HOH A . E 3 HOH 141 344 144 HOH HOH A . E 3 HOH 142 345 145 HOH HOH A . E 3 HOH 143 346 146 HOH HOH A . E 3 HOH 144 347 147 HOH HOH A . E 3 HOH 145 348 148 HOH HOH A . E 3 HOH 146 349 149 HOH HOH A . E 3 HOH 147 350 150 HOH HOH A . E 3 HOH 148 351 151 HOH HOH A . E 3 HOH 149 352 152 HOH HOH A . E 3 HOH 150 353 153 HOH HOH A . E 3 HOH 151 354 154 HOH HOH A . E 3 HOH 152 355 156 HOH HOH A . E 3 HOH 153 356 159 HOH HOH A . E 3 HOH 154 357 160 HOH HOH A . E 3 HOH 155 358 161 HOH HOH A . E 3 HOH 156 359 162 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ILE 14 ? CD1 ? A ILE 16 CD1 2 1 Y 1 A GLN 85 ? CD ? A GLN 87 CD 3 1 Y 1 A GLN 85 ? OE1 ? A GLN 87 OE1 4 1 Y 1 A GLN 85 ? NE2 ? A GLN 87 NE2 5 1 Y 1 A GLU 101 ? CD ? A GLU 103 CD 6 1 Y 1 A GLU 101 ? OE1 ? A GLU 103 OE1 7 1 Y 1 A GLU 101 ? OE2 ? A GLU 103 OE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 CBASS 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 SOLVE phasing . ? 5 # _cell.entry_id 3C5K _cell.length_a 40.500 _cell.length_b 45.109 _cell.length_c 55.759 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3C5K _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3C5K _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.09 _exptl_crystal.density_percent_sol 41.23 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 297 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '3.5M Na formate, 100mM Bis-tris propane pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 297K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2008-01-26 _diffrn_detector.details 'Si(111)' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.26000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.26000 # _reflns.entry_id 3C5K _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 1.55 _reflns.d_resolution_low 100 _reflns.number_all 15138 _reflns.number_obs 15138 _reflns.percent_possible_obs 98.0 _reflns.pdbx_Rmerge_I_obs 0.071 _reflns.pdbx_Rsym_value 0.071 _reflns.pdbx_netI_over_sigmaI 13.3 _reflns.B_iso_Wilson_estimate 12.3 _reflns.pdbx_redundancy 10.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.55 _reflns_shell.d_res_low 1.61 _reflns_shell.percent_possible_all 80.5 _reflns_shell.Rmerge_I_obs 0.201 _reflns_shell.pdbx_Rsym_value 0.201 _reflns_shell.meanI_over_sigI_obs 5.84 _reflns_shell.pdbx_redundancy 6.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1206 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3C5K _refine.ls_number_reflns_obs 9546 _refine.ls_number_reflns_all 9546 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 35.07 _refine.ls_d_res_high 1.55 _refine.ls_percent_reflns_obs 65.18 _refine.ls_R_factor_obs 0.1759 _refine.ls_R_factor_all 0.1759 _refine.ls_R_factor_R_work 0.17332 _refine.ls_R_factor_R_free 0.22663 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 486 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.956 _refine.correlation_coeff_Fo_to_Fc_free 0.938 _refine.B_iso_mean 10.927 _refine.aniso_B[1][1] -2.01 _refine.aniso_B[2][2] 1.68 _refine.aniso_B[3][3] 0.33 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;The Friedel pairs were used in phasing. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. Programs ARP/wARP 6.1.1, COOT 0.3.3 have also been used in refinement ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.134 _refine.pdbx_overall_ESU_R_Free 0.133 _refine.overall_SU_ML 0.054 _refine.overall_SU_B 1.422 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 840 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 156 _refine_hist.number_atoms_total 999 _refine_hist.d_res_high 1.55 _refine_hist.d_res_low 35.07 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.008 0.021 ? 872 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.151 1.916 ? 1197 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.122 5.000 ? 107 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.236 24.103 ? 39 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.759 15.000 ? 117 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 7.831 15.000 ? 1 'X-RAY DIFFRACTION' ? r_chiral_restr 0.099 0.200 ? 125 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 690 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.187 0.200 ? 407 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.302 0.200 ? 595 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.109 0.200 ? 96 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.023 0.200 ? 1 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.159 0.200 ? 60 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.130 0.200 ? 20 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.604 1.500 ? 548 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.043 2.000 ? 872 'X-RAY DIFFRACTION' ? r_scbond_it 1.500 3.000 ? 375 'X-RAY DIFFRACTION' ? r_scangle_it 2.257 4.500 ? 325 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.55 _refine_ls_shell.d_res_low 1.59 _refine_ls_shell.number_reflns_R_work 386 _refine_ls_shell.R_factor_R_work 0.199 _refine_ls_shell.percent_reflns_obs 37.32 _refine_ls_shell.R_factor_R_free 0.186 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 23 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3C5K _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3C5K _struct.title 'Crystal structure of human HDAC6 zinc finger domain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3C5K _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text ;HDAC6, Zinc finger, Actin-binding, Chromatin regulator, Cytoplasm, Hydrolase, Metal-binding, Nucleus, Phosphoprotein, Repressor, Transcription, Transcription regulation, Ubl conjugation, Zinc-finger, Structural Genomics, Structural Genomics Consortium, SGC ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code HDAC6_HUMAN _struct_ref.pdbx_db_accession Q9UBN7 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PLPWCPHLVAVCPIPAAGLDVTQPCGDCGTIQENWVCLSCYQVYCGRYINGHMLQHHGNSGHPLVLSYIDLSAWCYYCQA YVHHQALLDVKNIAHQNKFGEDMPHPH ; _struct_ref.pdbx_align_begin 1109 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3C5K _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 109 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9UBN7 _struct_ref_seq.db_align_beg 1109 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1215 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 107 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3C5K GLY A 1 ? UNP Q9UBN7 ? ? 'expression tag' -1 1 1 3C5K SER A 2 ? UNP Q9UBN7 ? ? 'expression tag' 0 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 9 ? VAL A 13 ? HIS A 7 VAL A 11 5 ? 5 HELX_P HELX_P2 2 GLY A 53 ? GLY A 63 ? GLY A 51 GLY A 61 1 ? 11 HELX_P HELX_P3 3 HIS A 86 ? ALA A 88 ? HIS A 84 ALA A 86 5 ? 3 HELX_P HELX_P4 4 LEU A 89 ? GLY A 102 ? LEU A 87 GLY A 100 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 7 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 5 A ZN 203 1_555 ? ? ? ? ? ? ? 2.358 ? ? metalc2 metalc ? ? A HIS 9 ND1 ? ? ? 1_555 D ZN . ZN ? ? A HIS 7 A ZN 203 1_555 ? ? ? ? ? ? ? 2.127 ? ? metalc3 metalc ? ? A CYS 27 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 25 A ZN 202 1_555 ? ? ? ? ? ? ? 2.392 ? ? metalc4 metalc ? ? A CYS 30 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 28 A ZN 202 1_555 ? ? ? ? ? ? ? 2.309 ? ? metalc5 metalc ? ? A CYS 39 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 37 A ZN 201 1_555 ? ? ? ? ? ? ? 2.303 ? ? metalc6 metalc ? ? A CYS 42 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 40 A ZN 201 1_555 ? ? ? ? ? ? ? 2.375 ? ? metalc7 metalc ? ? A CYS 47 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 45 A ZN 202 1_555 ? ? ? ? ? ? ? 2.215 ? ? metalc8 metalc ? ? A HIS 54 ND1 ? ? ? 1_555 C ZN . ZN ? ? A HIS 52 A ZN 202 1_555 ? ? ? ? ? ? ? 2.113 ? ? metalc9 metalc ? ? A HIS 58 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 56 A ZN 201 1_555 ? ? ? ? ? ? ? 2.096 ? ? metalc10 metalc ? ? A HIS 64 ND1 ? ? ? 1_555 B ZN . ZN ? ? A HIS 62 A ZN 201 1_555 ? ? ? ? ? ? ? 2.037 ? ? metalc11 metalc ? ? A CYS 77 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 75 A ZN 203 1_555 ? ? ? ? ? ? ? 2.379 ? ? metalc12 metalc ? ? A CYS 80 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 78 A ZN 203 1_555 ? ? ? ? ? ? ? 2.346 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 7 ? A CYS 5 ? 1_555 ZN ? D ZN . ? A ZN 203 ? 1_555 ND1 ? A HIS 9 ? A HIS 7 ? 1_555 109.3 ? 2 SG ? A CYS 7 ? A CYS 5 ? 1_555 ZN ? D ZN . ? A ZN 203 ? 1_555 SG ? A CYS 77 ? A CYS 75 ? 1_555 114.1 ? 3 ND1 ? A HIS 9 ? A HIS 7 ? 1_555 ZN ? D ZN . ? A ZN 203 ? 1_555 SG ? A CYS 77 ? A CYS 75 ? 1_555 99.1 ? 4 SG ? A CYS 7 ? A CYS 5 ? 1_555 ZN ? D ZN . ? A ZN 203 ? 1_555 SG ? A CYS 80 ? A CYS 78 ? 1_555 114.5 ? 5 ND1 ? A HIS 9 ? A HIS 7 ? 1_555 ZN ? D ZN . ? A ZN 203 ? 1_555 SG ? A CYS 80 ? A CYS 78 ? 1_555 103.7 ? 6 SG ? A CYS 77 ? A CYS 75 ? 1_555 ZN ? D ZN . ? A ZN 203 ? 1_555 SG ? A CYS 80 ? A CYS 78 ? 1_555 114.2 ? 7 SG ? A CYS 27 ? A CYS 25 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 SG ? A CYS 30 ? A CYS 28 ? 1_555 111.0 ? 8 SG ? A CYS 27 ? A CYS 25 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 SG ? A CYS 47 ? A CYS 45 ? 1_555 114.6 ? 9 SG ? A CYS 30 ? A CYS 28 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 SG ? A CYS 47 ? A CYS 45 ? 1_555 114.1 ? 10 SG ? A CYS 27 ? A CYS 25 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 ND1 ? A HIS 54 ? A HIS 52 ? 1_555 104.2 ? 11 SG ? A CYS 30 ? A CYS 28 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 ND1 ? A HIS 54 ? A HIS 52 ? 1_555 110.8 ? 12 SG ? A CYS 47 ? A CYS 45 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 ND1 ? A HIS 54 ? A HIS 52 ? 1_555 101.2 ? 13 SG ? A CYS 39 ? A CYS 37 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 SG ? A CYS 42 ? A CYS 40 ? 1_555 116.9 ? 14 SG ? A CYS 39 ? A CYS 37 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 NE2 ? A HIS 58 ? A HIS 56 ? 1_555 115.2 ? 15 SG ? A CYS 42 ? A CYS 40 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 NE2 ? A HIS 58 ? A HIS 56 ? 1_555 98.3 ? 16 SG ? A CYS 39 ? A CYS 37 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 ND1 ? A HIS 64 ? A HIS 62 ? 1_555 108.4 ? 17 SG ? A CYS 42 ? A CYS 40 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 ND1 ? A HIS 64 ? A HIS 62 ? 1_555 109.4 ? 18 NE2 ? A HIS 58 ? A HIS 56 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 ND1 ? A HIS 64 ? A HIS 62 ? 1_555 108.1 ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 45 ? CYS A 47 ? VAL A 43 CYS A 45 A 2 ASN A 36 ? CYS A 39 ? ASN A 34 CYS A 37 A 3 LEU A 66 ? SER A 69 ? LEU A 64 SER A 67 A 4 ALA A 75 ? CYS A 77 ? ALA A 73 CYS A 75 A 5 ALA A 82 ? TYR A 83 ? ALA A 80 TYR A 81 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TYR A 46 ? O TYR A 44 N TRP A 37 ? N TRP A 35 A 2 3 N VAL A 38 ? N VAL A 36 O LEU A 68 ? O LEU A 66 A 3 4 N VAL A 67 ? N VAL A 65 O TRP A 76 ? O TRP A 74 A 4 5 N CYS A 77 ? N CYS A 75 O ALA A 82 ? O ALA A 80 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 201 ? 4 'BINDING SITE FOR RESIDUE ZN A 201' AC2 Software A ZN 202 ? 4 'BINDING SITE FOR RESIDUE ZN A 202' AC3 Software A ZN 203 ? 4 'BINDING SITE FOR RESIDUE ZN A 203' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 39 ? CYS A 37 . ? 1_555 ? 2 AC1 4 CYS A 42 ? CYS A 40 . ? 1_555 ? 3 AC1 4 HIS A 58 ? HIS A 56 . ? 1_555 ? 4 AC1 4 HIS A 64 ? HIS A 62 . ? 1_555 ? 5 AC2 4 CYS A 27 ? CYS A 25 . ? 1_555 ? 6 AC2 4 CYS A 30 ? CYS A 28 . ? 1_555 ? 7 AC2 4 CYS A 47 ? CYS A 45 . ? 1_555 ? 8 AC2 4 HIS A 54 ? HIS A 52 . ? 1_555 ? 9 AC3 4 CYS A 7 ? CYS A 5 . ? 1_555 ? 10 AC3 4 HIS A 9 ? HIS A 7 . ? 1_555 ? 11 AC3 4 CYS A 77 ? CYS A 75 . ? 1_555 ? 12 AC3 4 CYS A 80 ? CYS A 78 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 27 ? ? -91.42 -66.13 2 1 ILE A 49 ? ? -92.71 -102.22 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id GLY _pdbx_unobs_or_zero_occ_residues.auth_seq_id -1 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id GLY _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 ZN ZN ZN N N 391 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _atom_sites.entry_id 3C5K _atom_sites.fract_transf_matrix[1][1] 0.024691 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022169 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017934 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_