data_3C65 # _entry.id 3C65 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3C65 RCSB RCSB046389 WWPDB D_1000046389 # _pdbx_database_status.entry_id 3C65 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-02-02 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pakotiprapha, D.' 1 'Bowman, B.R.' 2 'Mueller, A.A.' 3 'Inuzuka, Y.' 4 'Verdine, G.L.' 5 # _citation.id primary _citation.title ;Crystal Structure of Bacillus stearothermophilus UvrC 5' endonuclease domain ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Pakotiprapha, D.' 1 primary 'Bowman, B.R.' 2 primary 'Mueller, A.A.' 3 primary 'Inuzuka, Y.' 4 primary 'Verdine, G.L.' 5 # _cell.length_a 81.779 _cell.length_b 81.779 _cell.length_c 58.583 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 3C65 _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 61' _symmetry.entry_id 3C65 _symmetry.Int_Tables_number 169 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'UvrABC system protein C' 25867.391 1 ? ? ;5' endonuclease domain ; ? 2 water nat water 18.015 77 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Protein uvrC, Excinuclease ABC subunit C' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GSH(MSE)LGERLGIPAPRRIEAFDNSNIYGADPVSALVVFLDGKPAKKEYRKYKVKTVAGPNDYET(MSE)REVVRRRY TRVLKEGLPLPDLIIIDGGKGHLSAVRDVLENELGLDVPLAGLAKDEKHRTSELLAGDPPDVVPLDRQSQEFYLLQRIQD EVHRFAV(MSE)FHRKTRQKTMFHSVLDDIPGVGEKRKKALLNYFGSVKKMKEATVEELQRANIPRAVAEKIYEKLHE ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMLGERLGIPAPRRIEAFDNSNIYGADPVSALVVFLDGKPAKKEYRKYKVKTVAGPNDYETMREVVRRRYTRVLKEGL PLPDLIIIDGGKGHLSAVRDVLENELGLDVPLAGLAKDEKHRTSELLAGDPPDVVPLDRQSQEFYLLQRIQDEVHRFAVM FHRKTRQKTMFHSVLDDIPGVGEKRKKALLNYFGSVKKMKEATVEELQRANIPRAVAEKIYEKLHE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MSE n 1 5 LEU n 1 6 GLY n 1 7 GLU n 1 8 ARG n 1 9 LEU n 1 10 GLY n 1 11 ILE n 1 12 PRO n 1 13 ALA n 1 14 PRO n 1 15 ARG n 1 16 ARG n 1 17 ILE n 1 18 GLU n 1 19 ALA n 1 20 PHE n 1 21 ASP n 1 22 ASN n 1 23 SER n 1 24 ASN n 1 25 ILE n 1 26 TYR n 1 27 GLY n 1 28 ALA n 1 29 ASP n 1 30 PRO n 1 31 VAL n 1 32 SER n 1 33 ALA n 1 34 LEU n 1 35 VAL n 1 36 VAL n 1 37 PHE n 1 38 LEU n 1 39 ASP n 1 40 GLY n 1 41 LYS n 1 42 PRO n 1 43 ALA n 1 44 LYS n 1 45 LYS n 1 46 GLU n 1 47 TYR n 1 48 ARG n 1 49 LYS n 1 50 TYR n 1 51 LYS n 1 52 VAL n 1 53 LYS n 1 54 THR n 1 55 VAL n 1 56 ALA n 1 57 GLY n 1 58 PRO n 1 59 ASN n 1 60 ASP n 1 61 TYR n 1 62 GLU n 1 63 THR n 1 64 MSE n 1 65 ARG n 1 66 GLU n 1 67 VAL n 1 68 VAL n 1 69 ARG n 1 70 ARG n 1 71 ARG n 1 72 TYR n 1 73 THR n 1 74 ARG n 1 75 VAL n 1 76 LEU n 1 77 LYS n 1 78 GLU n 1 79 GLY n 1 80 LEU n 1 81 PRO n 1 82 LEU n 1 83 PRO n 1 84 ASP n 1 85 LEU n 1 86 ILE n 1 87 ILE n 1 88 ILE n 1 89 ASP n 1 90 GLY n 1 91 GLY n 1 92 LYS n 1 93 GLY n 1 94 HIS n 1 95 LEU n 1 96 SER n 1 97 ALA n 1 98 VAL n 1 99 ARG n 1 100 ASP n 1 101 VAL n 1 102 LEU n 1 103 GLU n 1 104 ASN n 1 105 GLU n 1 106 LEU n 1 107 GLY n 1 108 LEU n 1 109 ASP n 1 110 VAL n 1 111 PRO n 1 112 LEU n 1 113 ALA n 1 114 GLY n 1 115 LEU n 1 116 ALA n 1 117 LYS n 1 118 ASP n 1 119 GLU n 1 120 LYS n 1 121 HIS n 1 122 ARG n 1 123 THR n 1 124 SER n 1 125 GLU n 1 126 LEU n 1 127 LEU n 1 128 ALA n 1 129 GLY n 1 130 ASP n 1 131 PRO n 1 132 PRO n 1 133 ASP n 1 134 VAL n 1 135 VAL n 1 136 PRO n 1 137 LEU n 1 138 ASP n 1 139 ARG n 1 140 GLN n 1 141 SER n 1 142 GLN n 1 143 GLU n 1 144 PHE n 1 145 TYR n 1 146 LEU n 1 147 LEU n 1 148 GLN n 1 149 ARG n 1 150 ILE n 1 151 GLN n 1 152 ASP n 1 153 GLU n 1 154 VAL n 1 155 HIS n 1 156 ARG n 1 157 PHE n 1 158 ALA n 1 159 VAL n 1 160 MSE n 1 161 PHE n 1 162 HIS n 1 163 ARG n 1 164 LYS n 1 165 THR n 1 166 ARG n 1 167 GLN n 1 168 LYS n 1 169 THR n 1 170 MET n 1 171 PHE n 1 172 HIS n 1 173 SER n 1 174 VAL n 1 175 LEU n 1 176 ASP n 1 177 ASP n 1 178 ILE n 1 179 PRO n 1 180 GLY n 1 181 VAL n 1 182 GLY n 1 183 GLU n 1 184 LYS n 1 185 ARG n 1 186 LYS n 1 187 LYS n 1 188 ALA n 1 189 LEU n 1 190 LEU n 1 191 ASN n 1 192 TYR n 1 193 PHE n 1 194 GLY n 1 195 SER n 1 196 VAL n 1 197 LYS n 1 198 LYS n 1 199 MET n 1 200 LYS n 1 201 GLU n 1 202 ALA n 1 203 THR n 1 204 VAL n 1 205 GLU n 1 206 GLU n 1 207 LEU n 1 208 GLN n 1 209 ARG n 1 210 ALA n 1 211 ASN n 1 212 ILE n 1 213 PRO n 1 214 ARG n 1 215 ALA n 1 216 VAL n 1 217 ALA n 1 218 GLU n 1 219 LYS n 1 220 ILE n 1 221 TYR n 1 222 GLU n 1 223 LYS n 1 224 LEU n 1 225 HIS n 1 226 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene uvrC _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 10 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus stearothermophilus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id ? _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3C65 _struct_ref.pdbx_db_accession 3C65 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GSHMLGERLGIPAPRRIEAFDNSNIYGADPVSALVVFLDGKPAKKEYRKYKVKTVAGPNDYETMREVVRRRYTRVLKEGL PLPDLIIIDGGKGHLSAVRDVLENELGLDVPLAGLAKDEKHRTSELLAGDPPDVVPLDRQSQEFYLLQRIQDEVHRFAVM FHRKTRQKTMFHSVLDDIPGVGEKRKKALLNYFGSVKKMKEATVEELQRANIPRAVAEKIYEKLHE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3C65 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 160 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 3C65 _struct_ref_seq.db_align_beg -4 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 524 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -4 _struct_ref_seq.pdbx_auth_seq_align_end 524 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3C65 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.19 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 43.74 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'hanging drop vapor diffusion' _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.temp 292 _exptl_crystal_grow.pdbx_details 'Tris-HCl, sodium citrate, sodium acetate, sodium formate, sodium chloride, pH 8.0, hanging drop vapor diffusion, temperature 292K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector ? _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 2006-08-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97927 1.0 2 0.97941 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_wavelength_list '0.97927, 0.97941' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID # _reflns.entry_id 3C65 _reflns.d_resolution_high 1.900 _reflns.d_resolution_low 50.000 _reflns.number_obs 17709 _reflns.pdbx_Rmerge_I_obs 0.076 _reflns.pdbx_netI_over_sigmaI 9.900 _reflns.pdbx_chi_squared 1.357 _reflns.pdbx_redundancy 11.200 _reflns.percent_possible_obs 99.800 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.97 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.251 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 0.798 _reflns_shell.pdbx_redundancy 11.20 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1733 _reflns_shell.percent_possible_all 99.60 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3C65 _refine.ls_d_res_high 1.900 _refine.ls_d_res_low 50.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 85.700 _refine.ls_number_reflns_obs 15152 _refine.ls_R_factor_R_work 0.204 _refine.ls_R_factor_R_free 0.221 _refine.ls_percent_reflns_R_free 8.700 _refine.ls_number_reflns_R_free 1533 _refine.B_iso_mean 21.071 _refine.solvent_model_param_bsol 54.511 _refine.aniso_B[1][1] 1.537 _refine.aniso_B[2][2] 1.537 _refine.aniso_B[3][3] -3.073 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.pdbx_method_to_determine_struct . _refine.overall_FOM_work_R_set 0.870 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1198 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 77 _refine_hist.number_atoms_total 1275 _refine_hist.d_res_high 1.900 _refine_hist.d_res_low 50.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d ? 0.005 ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? 1.259 ? ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 CNS_TOPPAR:protein_rep.param ? 'X-RAY DIFFRACTION' 2 CNS_TOPPAR:water_rep.param ? 'X-RAY DIFFRACTION' # _struct.entry_id 3C65 _struct.title ;Crystal Structure of Bacillus stearothermophilus UvrC 5' endonuclease domain ; _struct.pdbx_descriptor ;Crystal Structure of Bacillus stearothermophilus UvrC 5' endonuclease domain ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3C65 _struct_keywords.text ;UvrC, endonuclease, nucleotide excision repair, DNA repair, RNase H, Cytoplasm, DNA damage, DNA excision, Excision nuclease, SOS response, HYDROLASE ; _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 1 ? GLY A 10 ? GLY A -4 GLY A 374 1 ? 10 HELX_P HELX_P2 2 LYS A 44 ? TYR A 47 ? LYS A 408 TYR A 411 5 ? 4 HELX_P HELX_P3 3 ASN A 59 ? GLY A 79 ? ASN A 423 GLY A 443 1 ? 21 HELX_P HELX_P4 4 GLY A 91 ? GLU A 105 ? GLY A 455 GLU A 469 1 ? 15 HELX_P HELX_P5 5 SER A 141 ? ALA A 158 ? SER A 505 ALA A 522 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A HIS 3 C ? ? ? 1_555 A MSE 4 N ? ? A HIS -2 A MSE -1 1_555 ? ? ? ? ? ? ? 1.329 ? covale2 covale ? ? A MSE 4 C ? ? ? 1_555 A LEU 5 N ? ? A MSE -1 A LEU 369 1_555 ? ? ? ? ? ? ? 1.329 ? covale3 covale ? ? A THR 63 C ? ? ? 1_555 A MSE 64 N ? ? A THR 427 A MSE 428 1_555 ? ? ? ? ? ? ? 1.330 ? covale4 covale ? ? A MSE 64 C ? ? ? 1_555 A ARG 65 N ? ? A MSE 428 A ARG 429 1_555 ? ? ? ? ? ? ? 1.328 ? covale5 covale ? ? A VAL 159 C ? ? ? 1_555 A MSE 160 N ? ? A VAL 523 A MSE 524 1_555 ? ? ? ? ? ? ? 1.329 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASP _struct_mon_prot_cis.label_seq_id 130 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASP _struct_mon_prot_cis.auth_seq_id 494 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 131 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 495 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.07 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 5 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 41 ? PRO A 42 ? LYS A 405 PRO A 406 A 2 VAL A 31 ? LEU A 38 ? VAL A 395 LEU A 402 A 3 ARG A 48 ? LYS A 51 ? ARG A 412 LYS A 415 B 1 LYS A 41 ? PRO A 42 ? LYS A 405 PRO A 406 B 2 VAL A 31 ? LEU A 38 ? VAL A 395 LEU A 402 B 3 ARG A 16 ? ASN A 24 ? ARG A 380 ASN A 388 B 4 LEU A 85 ? ILE A 88 ? LEU A 449 ILE A 452 B 5 LEU A 112 ? GLY A 114 ? LEU A 476 GLY A 478 C 1 LEU A 126 ? ALA A 128 ? LEU A 490 ALA A 492 C 2 ASP A 133 ? VAL A 135 ? ASP A 497 VAL A 499 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LYS A 41 ? O LYS A 405 N LEU A 38 ? N LEU A 402 A 2 3 N SER A 32 ? N SER A 396 O TYR A 50 ? O TYR A 414 B 1 2 O LYS A 41 ? O LYS A 405 N LEU A 38 ? N LEU A 402 B 2 3 O PHE A 37 ? O PHE A 401 N ILE A 17 ? N ILE A 381 B 3 4 N PHE A 20 ? N PHE A 384 O ILE A 87 ? O ILE A 451 B 4 5 N ILE A 86 ? N ILE A 450 O ALA A 113 ? O ALA A 477 C 1 2 N LEU A 126 ? N LEU A 490 O VAL A 135 ? O VAL A 499 # _atom_sites.entry_id 3C65 _atom_sites.fract_transf_matrix[1][1] 0.012228 _atom_sites.fract_transf_matrix[1][2] 0.007060 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014120 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017070 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -4 -4 GLY GLY A . n A 1 2 SER 2 -3 -3 SER SER A . n A 1 3 HIS 3 -2 -2 HIS HIS A . n A 1 4 MSE 4 -1 -1 MSE MSE A . n A 1 5 LEU 5 369 369 LEU LEU A . n A 1 6 GLY 6 370 370 GLY GLY A . n A 1 7 GLU 7 371 371 GLU GLU A . n A 1 8 ARG 8 372 372 ARG ARG A . n A 1 9 LEU 9 373 373 LEU LEU A . n A 1 10 GLY 10 374 374 GLY GLY A . n A 1 11 ILE 11 375 375 ILE ILE A . n A 1 12 PRO 12 376 376 PRO PRO A . n A 1 13 ALA 13 377 377 ALA ALA A . n A 1 14 PRO 14 378 378 PRO PRO A . n A 1 15 ARG 15 379 379 ARG ARG A . n A 1 16 ARG 16 380 380 ARG ARG A . n A 1 17 ILE 17 381 381 ILE ILE A . n A 1 18 GLU 18 382 382 GLU GLU A . n A 1 19 ALA 19 383 383 ALA ALA A . n A 1 20 PHE 20 384 384 PHE PHE A . n A 1 21 ASP 21 385 385 ASP ASP A . n A 1 22 ASN 22 386 386 ASN ASN A . n A 1 23 SER 23 387 387 SER SER A . n A 1 24 ASN 24 388 388 ASN ASN A . n A 1 25 ILE 25 389 389 ILE ILE A . n A 1 26 TYR 26 390 390 TYR TYR A . n A 1 27 GLY 27 391 391 GLY GLY A . n A 1 28 ALA 28 392 392 ALA ALA A . n A 1 29 ASP 29 393 393 ASP ASP A . n A 1 30 PRO 30 394 394 PRO PRO A . n A 1 31 VAL 31 395 395 VAL VAL A . n A 1 32 SER 32 396 396 SER SER A . n A 1 33 ALA 33 397 397 ALA ALA A . n A 1 34 LEU 34 398 398 LEU LEU A . n A 1 35 VAL 35 399 399 VAL VAL A . n A 1 36 VAL 36 400 400 VAL VAL A . n A 1 37 PHE 37 401 401 PHE PHE A . n A 1 38 LEU 38 402 402 LEU LEU A . n A 1 39 ASP 39 403 403 ASP ASP A . n A 1 40 GLY 40 404 404 GLY GLY A . n A 1 41 LYS 41 405 405 LYS LYS A . n A 1 42 PRO 42 406 406 PRO PRO A . n A 1 43 ALA 43 407 407 ALA ALA A . n A 1 44 LYS 44 408 408 LYS LYS A . n A 1 45 LYS 45 409 409 LYS LYS A . n A 1 46 GLU 46 410 410 GLU GLU A . n A 1 47 TYR 47 411 411 TYR TYR A . n A 1 48 ARG 48 412 412 ARG ARG A . n A 1 49 LYS 49 413 413 LYS LYS A . n A 1 50 TYR 50 414 414 TYR TYR A . n A 1 51 LYS 51 415 415 LYS LYS A . n A 1 52 VAL 52 416 416 VAL VAL A . n A 1 53 LYS 53 417 417 LYS LYS A . n A 1 54 THR 54 418 418 THR THR A . n A 1 55 VAL 55 419 419 VAL VAL A . n A 1 56 ALA 56 420 420 ALA ALA A . n A 1 57 GLY 57 421 421 GLY GLY A . n A 1 58 PRO 58 422 422 PRO PRO A . n A 1 59 ASN 59 423 423 ASN ASN A . n A 1 60 ASP 60 424 424 ASP ASP A . n A 1 61 TYR 61 425 425 TYR TYR A . n A 1 62 GLU 62 426 426 GLU GLU A . n A 1 63 THR 63 427 427 THR THR A . n A 1 64 MSE 64 428 428 MSE MSE A . n A 1 65 ARG 65 429 429 ARG ARG A . n A 1 66 GLU 66 430 430 GLU GLU A . n A 1 67 VAL 67 431 431 VAL VAL A . n A 1 68 VAL 68 432 432 VAL VAL A . n A 1 69 ARG 69 433 433 ARG ARG A . n A 1 70 ARG 70 434 434 ARG ARG A . n A 1 71 ARG 71 435 435 ARG ARG A . n A 1 72 TYR 72 436 436 TYR TYR A . n A 1 73 THR 73 437 437 THR THR A . n A 1 74 ARG 74 438 438 ARG ARG A . n A 1 75 VAL 75 439 439 VAL VAL A . n A 1 76 LEU 76 440 440 LEU LEU A . n A 1 77 LYS 77 441 441 LYS LYS A . n A 1 78 GLU 78 442 442 GLU GLU A . n A 1 79 GLY 79 443 443 GLY GLY A . n A 1 80 LEU 80 444 444 LEU LEU A . n A 1 81 PRO 81 445 445 PRO PRO A . n A 1 82 LEU 82 446 446 LEU LEU A . n A 1 83 PRO 83 447 447 PRO PRO A . n A 1 84 ASP 84 448 448 ASP ASP A . n A 1 85 LEU 85 449 449 LEU LEU A . n A 1 86 ILE 86 450 450 ILE ILE A . n A 1 87 ILE 87 451 451 ILE ILE A . n A 1 88 ILE 88 452 452 ILE ILE A . n A 1 89 ASP 89 453 453 ASP ASP A . n A 1 90 GLY 90 454 454 GLY GLY A . n A 1 91 GLY 91 455 455 GLY GLY A . n A 1 92 LYS 92 456 456 LYS LYS A . n A 1 93 GLY 93 457 457 GLY GLY A . n A 1 94 HIS 94 458 458 HIS HIS A . n A 1 95 LEU 95 459 459 LEU LEU A . n A 1 96 SER 96 460 460 SER SER A . n A 1 97 ALA 97 461 461 ALA ALA A . n A 1 98 VAL 98 462 462 VAL VAL A . n A 1 99 ARG 99 463 463 ARG ARG A . n A 1 100 ASP 100 464 464 ASP ASP A . n A 1 101 VAL 101 465 465 VAL VAL A . n A 1 102 LEU 102 466 466 LEU LEU A . n A 1 103 GLU 103 467 467 GLU GLU A . n A 1 104 ASN 104 468 468 ASN ASN A . n A 1 105 GLU 105 469 469 GLU GLU A . n A 1 106 LEU 106 470 470 LEU LEU A . n A 1 107 GLY 107 471 471 GLY GLY A . n A 1 108 LEU 108 472 472 LEU LEU A . n A 1 109 ASP 109 473 473 ASP ASP A . n A 1 110 VAL 110 474 474 VAL VAL A . n A 1 111 PRO 111 475 475 PRO PRO A . n A 1 112 LEU 112 476 476 LEU LEU A . n A 1 113 ALA 113 477 477 ALA ALA A . n A 1 114 GLY 114 478 478 GLY GLY A . n A 1 115 LEU 115 479 479 LEU LEU A . n A 1 116 ALA 116 480 ? ? ? A . n A 1 117 LYS 117 481 ? ? ? A . n A 1 118 ASP 118 482 ? ? ? A . n A 1 119 GLU 119 483 ? ? ? A . n A 1 120 LYS 120 484 ? ? ? A . n A 1 121 HIS 121 485 ? ? ? A . n A 1 122 ARG 122 486 ? ? ? A . n A 1 123 THR 123 487 ? ? ? A . n A 1 124 SER 124 488 488 SER SER A . n A 1 125 GLU 125 489 489 GLU GLU A . n A 1 126 LEU 126 490 490 LEU LEU A . n A 1 127 LEU 127 491 491 LEU LEU A . n A 1 128 ALA 128 492 492 ALA ALA A . n A 1 129 GLY 129 493 493 GLY GLY A . n A 1 130 ASP 130 494 494 ASP ASP A . n A 1 131 PRO 131 495 495 PRO PRO A . n A 1 132 PRO 132 496 496 PRO PRO A . n A 1 133 ASP 133 497 497 ASP ASP A . n A 1 134 VAL 134 498 498 VAL VAL A . n A 1 135 VAL 135 499 499 VAL VAL A . n A 1 136 PRO 136 500 500 PRO PRO A . n A 1 137 LEU 137 501 501 LEU LEU A . n A 1 138 ASP 138 502 502 ASP ASP A . n A 1 139 ARG 139 503 503 ARG ARG A . n A 1 140 GLN 140 504 504 GLN GLN A . n A 1 141 SER 141 505 505 SER SER A . n A 1 142 GLN 142 506 506 GLN GLN A . n A 1 143 GLU 143 507 507 GLU GLU A . n A 1 144 PHE 144 508 508 PHE PHE A . n A 1 145 TYR 145 509 509 TYR TYR A . n A 1 146 LEU 146 510 510 LEU LEU A . n A 1 147 LEU 147 511 511 LEU LEU A . n A 1 148 GLN 148 512 512 GLN GLN A . n A 1 149 ARG 149 513 513 ARG ARG A . n A 1 150 ILE 150 514 514 ILE ILE A . n A 1 151 GLN 151 515 515 GLN GLN A . n A 1 152 ASP 152 516 516 ASP ASP A . n A 1 153 GLU 153 517 517 GLU GLU A . n A 1 154 VAL 154 518 518 VAL VAL A . n A 1 155 HIS 155 519 519 HIS HIS A . n A 1 156 ARG 156 520 520 ARG ARG A . n A 1 157 PHE 157 521 521 PHE PHE A . n A 1 158 ALA 158 522 522 ALA ALA A . n A 1 159 VAL 159 523 523 VAL VAL A . n A 1 160 MSE 160 524 524 MSE MSE A . n A 1 161 PHE 161 525 ? ? ? A . n A 1 162 HIS 162 526 ? ? ? A . n A 1 163 ARG 163 527 ? ? ? A . n A 1 164 LYS 164 528 ? ? ? A . n A 1 165 THR 165 529 ? ? ? A . n A 1 166 ARG 166 530 ? ? ? A . n A 1 167 GLN 167 531 ? ? ? A . n A 1 168 LYS 168 532 ? ? ? A . n A 1 169 THR 169 533 ? ? ? A . n A 1 170 MET 170 534 ? ? ? A . n A 1 171 PHE 171 535 ? ? ? A . n A 1 172 HIS 172 536 ? ? ? A . n A 1 173 SER 173 537 ? ? ? A . n A 1 174 VAL 174 538 ? ? ? A . n A 1 175 LEU 175 539 ? ? ? A . n A 1 176 ASP 176 540 ? ? ? A . n A 1 177 ASP 177 541 ? ? ? A . n A 1 178 ILE 178 542 ? ? ? A . n A 1 179 PRO 179 543 ? ? ? A . n A 1 180 GLY 180 544 ? ? ? A . n A 1 181 VAL 181 545 ? ? ? A . n A 1 182 GLY 182 546 ? ? ? A . n A 1 183 GLU 183 547 ? ? ? A . n A 1 184 LYS 184 548 ? ? ? A . n A 1 185 ARG 185 549 ? ? ? A . n A 1 186 LYS 186 550 ? ? ? A . n A 1 187 LYS 187 551 ? ? ? A . n A 1 188 ALA 188 552 ? ? ? A . n A 1 189 LEU 189 553 ? ? ? A . n A 1 190 LEU 190 554 ? ? ? A . n A 1 191 ASN 191 555 ? ? ? A . n A 1 192 TYR 192 556 ? ? ? A . n A 1 193 PHE 193 557 ? ? ? A . n A 1 194 GLY 194 558 ? ? ? A . n A 1 195 SER 195 559 ? ? ? A . n A 1 196 VAL 196 560 ? ? ? A . n A 1 197 LYS 197 561 ? ? ? A . n A 1 198 LYS 198 562 ? ? ? A . n A 1 199 MET 199 563 ? ? ? A . n A 1 200 LYS 200 564 ? ? ? A . n A 1 201 GLU 201 565 ? ? ? A . n A 1 202 ALA 202 566 ? ? ? A . n A 1 203 THR 203 567 ? ? ? A . n A 1 204 VAL 204 568 ? ? ? A . n A 1 205 GLU 205 569 ? ? ? A . n A 1 206 GLU 206 570 ? ? ? A . n A 1 207 LEU 207 571 ? ? ? A . n A 1 208 GLN 208 572 ? ? ? A . n A 1 209 ARG 209 573 ? ? ? A . n A 1 210 ALA 210 574 ? ? ? A . n A 1 211 ASN 211 575 ? ? ? A . n A 1 212 ILE 212 576 ? ? ? A . n A 1 213 PRO 213 577 ? ? ? A . n A 1 214 ARG 214 578 ? ? ? A . n A 1 215 ALA 215 579 ? ? ? A . n A 1 216 VAL 216 580 ? ? ? A . n A 1 217 ALA 217 581 ? ? ? A . n A 1 218 GLU 218 582 ? ? ? A . n A 1 219 LYS 219 583 ? ? ? A . n A 1 220 ILE 220 584 ? ? ? A . n A 1 221 TYR 221 585 ? ? ? A . n A 1 222 GLU 222 586 ? ? ? A . n A 1 223 LYS 223 587 ? ? ? A . n A 1 224 LEU 224 588 ? ? ? A . n A 1 225 HIS 225 589 ? ? ? A . n A 1 226 GLU 226 590 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 1 1 HOH TIP A . B 2 HOH 2 2 2 HOH TIP A . B 2 HOH 3 3 3 HOH TIP A . B 2 HOH 4 4 4 HOH TIP A . B 2 HOH 5 5 5 HOH TIP A . B 2 HOH 6 6 6 HOH TIP A . B 2 HOH 7 7 7 HOH TIP A . B 2 HOH 8 8 8 HOH TIP A . B 2 HOH 9 9 9 HOH TIP A . B 2 HOH 10 10 10 HOH TIP A . B 2 HOH 11 11 11 HOH TIP A . B 2 HOH 12 12 12 HOH TIP A . B 2 HOH 13 13 13 HOH TIP A . B 2 HOH 14 14 14 HOH TIP A . B 2 HOH 15 15 15 HOH TIP A . B 2 HOH 16 16 16 HOH TIP A . B 2 HOH 17 17 17 HOH TIP A . B 2 HOH 18 18 18 HOH TIP A . B 2 HOH 19 19 19 HOH TIP A . B 2 HOH 20 20 20 HOH TIP A . B 2 HOH 21 21 21 HOH TIP A . B 2 HOH 22 22 22 HOH TIP A . B 2 HOH 23 23 23 HOH TIP A . B 2 HOH 24 24 24 HOH TIP A . B 2 HOH 25 25 25 HOH TIP A . B 2 HOH 26 26 26 HOH TIP A . B 2 HOH 27 27 27 HOH TIP A . B 2 HOH 28 28 28 HOH TIP A . B 2 HOH 29 29 29 HOH TIP A . B 2 HOH 30 30 30 HOH TIP A . B 2 HOH 31 31 31 HOH TIP A . B 2 HOH 32 32 32 HOH TIP A . B 2 HOH 33 33 33 HOH TIP A . B 2 HOH 34 34 34 HOH TIP A . B 2 HOH 35 35 35 HOH TIP A . B 2 HOH 36 36 36 HOH TIP A . B 2 HOH 37 37 37 HOH TIP A . B 2 HOH 38 38 38 HOH TIP A . B 2 HOH 39 39 39 HOH TIP A . B 2 HOH 40 40 40 HOH TIP A . B 2 HOH 41 41 41 HOH TIP A . B 2 HOH 42 42 42 HOH TIP A . B 2 HOH 43 43 43 HOH TIP A . B 2 HOH 44 44 44 HOH TIP A . B 2 HOH 45 45 45 HOH TIP A . B 2 HOH 46 46 46 HOH TIP A . B 2 HOH 47 47 47 HOH TIP A . B 2 HOH 48 48 48 HOH TIP A . B 2 HOH 49 49 49 HOH TIP A . B 2 HOH 50 50 50 HOH TIP A . B 2 HOH 51 51 51 HOH TIP A . B 2 HOH 52 52 52 HOH TIP A . B 2 HOH 53 53 53 HOH TIP A . B 2 HOH 54 54 54 HOH TIP A . B 2 HOH 55 55 55 HOH TIP A . B 2 HOH 56 56 56 HOH TIP A . B 2 HOH 57 57 57 HOH TIP A . B 2 HOH 58 58 58 HOH TIP A . B 2 HOH 59 59 59 HOH TIP A . B 2 HOH 60 60 60 HOH TIP A . B 2 HOH 61 61 61 HOH TIP A . B 2 HOH 62 62 62 HOH TIP A . B 2 HOH 63 63 63 HOH TIP A . B 2 HOH 64 64 64 HOH TIP A . B 2 HOH 65 65 65 HOH TIP A . B 2 HOH 66 66 66 HOH TIP A . B 2 HOH 67 67 67 HOH TIP A . B 2 HOH 68 68 68 HOH TIP A . B 2 HOH 69 69 69 HOH TIP A . B 2 HOH 70 70 70 HOH TIP A . B 2 HOH 71 71 71 HOH TIP A . B 2 HOH 72 72 72 HOH TIP A . B 2 HOH 73 73 73 HOH TIP A . B 2 HOH 74 74 74 HOH TIP A . B 2 HOH 75 75 75 HOH TIP A . B 2 HOH 76 76 76 HOH TIP A . B 2 HOH 77 77 77 HOH TIP A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 4 A MSE -1 ? MET SELENOMETHIONINE 2 A MSE 64 A MSE 428 ? MET SELENOMETHIONINE 3 A MSE 160 A MSE 524 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-08-05 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.900 _diffrn_reflns.pdbx_d_res_low 50.000 _diffrn_reflns.pdbx_number_obs 17709 _diffrn_reflns.pdbx_Rmerge_I_obs 0.076 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.36 _diffrn_reflns.av_sigmaI_over_netI 9.90 _diffrn_reflns.pdbx_redundancy 11.20 _diffrn_reflns.pdbx_percent_possible_obs 99.80 _diffrn_reflns.number 197950 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 4.09 50.00 ? ? 0.052 ? 3.420 11.10 99.40 1 3.25 4.09 ? ? 0.050 ? 1.888 10.80 100.00 1 2.84 3.25 ? ? 0.070 ? 1.558 11.10 99.90 1 2.58 2.84 ? ? 0.086 ? 1.339 11.20 99.90 1 2.39 2.58 ? ? 0.098 ? 1.079 11.20 99.80 1 2.25 2.39 ? ? 0.105 ? 0.936 11.30 99.80 1 2.14 2.25 ? ? 0.128 ? 0.876 11.20 99.70 1 2.05 2.14 ? ? 0.153 ? 0.832 11.20 99.80 1 1.97 2.05 ? ? 0.191 ? 0.799 11.30 99.60 1 1.90 1.97 ? ? 0.251 ? 0.798 11.20 99.60 # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 SOLOMON . ? program 'Abrahams J. P.' ccp4@dl.ac.uk phasing http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 4 PDB_EXTRACT 3.004 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 SHARP . ? ? ? ? phasing ? ? ? 6 # _pdbx_entry_details.sequence_details 'THE FIRST FOUR RESIDUES ARE EXPRESSION TAGS' _pdbx_entry_details.entry_id 3C65 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 473 ? ? -116.15 52.24 2 1 PRO A 500 ? ? -68.83 78.78 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 480 ? A ALA 116 2 1 Y 1 A LYS 481 ? A LYS 117 3 1 Y 1 A ASP 482 ? A ASP 118 4 1 Y 1 A GLU 483 ? A GLU 119 5 1 Y 1 A LYS 484 ? A LYS 120 6 1 Y 1 A HIS 485 ? A HIS 121 7 1 Y 1 A ARG 486 ? A ARG 122 8 1 Y 1 A THR 487 ? A THR 123 9 1 Y 1 A PHE 525 ? A PHE 161 10 1 Y 1 A HIS 526 ? A HIS 162 11 1 Y 1 A ARG 527 ? A ARG 163 12 1 Y 1 A LYS 528 ? A LYS 164 13 1 Y 1 A THR 529 ? A THR 165 14 1 Y 1 A ARG 530 ? A ARG 166 15 1 Y 1 A GLN 531 ? A GLN 167 16 1 Y 1 A LYS 532 ? A LYS 168 17 1 Y 1 A THR 533 ? A THR 169 18 1 Y 1 A MET 534 ? A MET 170 19 1 Y 1 A PHE 535 ? A PHE 171 20 1 Y 1 A HIS 536 ? A HIS 172 21 1 Y 1 A SER 537 ? A SER 173 22 1 Y 1 A VAL 538 ? A VAL 174 23 1 Y 1 A LEU 539 ? A LEU 175 24 1 Y 1 A ASP 540 ? A ASP 176 25 1 Y 1 A ASP 541 ? A ASP 177 26 1 Y 1 A ILE 542 ? A ILE 178 27 1 Y 1 A PRO 543 ? A PRO 179 28 1 Y 1 A GLY 544 ? A GLY 180 29 1 Y 1 A VAL 545 ? A VAL 181 30 1 Y 1 A GLY 546 ? A GLY 182 31 1 Y 1 A GLU 547 ? A GLU 183 32 1 Y 1 A LYS 548 ? A LYS 184 33 1 Y 1 A ARG 549 ? A ARG 185 34 1 Y 1 A LYS 550 ? A LYS 186 35 1 Y 1 A LYS 551 ? A LYS 187 36 1 Y 1 A ALA 552 ? A ALA 188 37 1 Y 1 A LEU 553 ? A LEU 189 38 1 Y 1 A LEU 554 ? A LEU 190 39 1 Y 1 A ASN 555 ? A ASN 191 40 1 Y 1 A TYR 556 ? A TYR 192 41 1 Y 1 A PHE 557 ? A PHE 193 42 1 Y 1 A GLY 558 ? A GLY 194 43 1 Y 1 A SER 559 ? A SER 195 44 1 Y 1 A VAL 560 ? A VAL 196 45 1 Y 1 A LYS 561 ? A LYS 197 46 1 Y 1 A LYS 562 ? A LYS 198 47 1 Y 1 A MET 563 ? A MET 199 48 1 Y 1 A LYS 564 ? A LYS 200 49 1 Y 1 A GLU 565 ? A GLU 201 50 1 Y 1 A ALA 566 ? A ALA 202 51 1 Y 1 A THR 567 ? A THR 203 52 1 Y 1 A VAL 568 ? A VAL 204 53 1 Y 1 A GLU 569 ? A GLU 205 54 1 Y 1 A GLU 570 ? A GLU 206 55 1 Y 1 A LEU 571 ? A LEU 207 56 1 Y 1 A GLN 572 ? A GLN 208 57 1 Y 1 A ARG 573 ? A ARG 209 58 1 Y 1 A ALA 574 ? A ALA 210 59 1 Y 1 A ASN 575 ? A ASN 211 60 1 Y 1 A ILE 576 ? A ILE 212 61 1 Y 1 A PRO 577 ? A PRO 213 62 1 Y 1 A ARG 578 ? A ARG 214 63 1 Y 1 A ALA 579 ? A ALA 215 64 1 Y 1 A VAL 580 ? A VAL 216 65 1 Y 1 A ALA 581 ? A ALA 217 66 1 Y 1 A GLU 582 ? A GLU 218 67 1 Y 1 A LYS 583 ? A LYS 219 68 1 Y 1 A ILE 584 ? A ILE 220 69 1 Y 1 A TYR 585 ? A TYR 221 70 1 Y 1 A GLU 586 ? A GLU 222 71 1 Y 1 A LYS 587 ? A LYS 223 72 1 Y 1 A LEU 588 ? A LEU 224 73 1 Y 1 A HIS 589 ? A HIS 225 74 1 Y 1 A GLU 590 ? A GLU 226 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #