HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 05-FEB-08 3C6V TITLE CRYSTAL STRUCTURE OF AU4130/APC7354, A PROBABLE ENZYME FROM THE TITLE 2 THERMOPHILIC FUNGUS ASPERGILLUS FUMIGATUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE TAUTOMERASE/DEHALOGENASE AU4130; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS FUMIGATUS AF293; SOURCE 3 ORGANISM_TAXID: 330879; SOURCE 4 STRAIN: AF293 / CBS 101355 / FGSC A1100; SOURCE 5 GENE: AU04310, AFUA_3G03220; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: P15TVLIC KEYWDS ASPERGILLUS FUMIGATUS TRIMERIC THERMOPHILIC PROBABLE KEYWDS 2 TAUTOMERASE/DEHALOGENASE, STRUCTURAL GENOMICS, PSI-2, PROTEIN KEYWDS 3 STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, KEYWDS 4 UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR A.U.SINGER,T.A.BINKOWSKI,T.SKARINA,O.KAGAN,A.M.EDWARDS,A.JOACHIMIAK, AUTHOR 2 A.SAVCHENKO,MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 4 25-OCT-17 3C6V 1 REMARK REVDAT 3 13-JUL-11 3C6V 1 VERSN REVDAT 2 24-FEB-09 3C6V 1 VERSN REVDAT 1 19-FEB-08 3C6V 0 JRNL AUTH A.U.SINGER,T.A.BINKOWSKI,T.SKARINA,O.KAGAN,A.M.EDWARDS, JRNL AUTH 2 A.JOACHIMIAK,A.SAVCHENKO JRNL TITL CRYSTAL STRUCTURE OF AU4130/APC7354, A PROBABLE ENZYME FROM JRNL TITL 2 THE THERMOPHILIC FUNGUS ASPERGILLUS FUMIGATUS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.32 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 38840 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2072 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2809 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.43 REMARK 3 BIN R VALUE (WORKING SET) : 0.1530 REMARK 3 BIN FREE R VALUE SET COUNT : 145 REMARK 3 BIN FREE R VALUE : 0.1970 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3529 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 7 REMARK 3 SOLVENT ATOMS : 567 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 19.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.94000 REMARK 3 B22 (A**2) : -0.28000 REMARK 3 B33 (A**2) : -0.66000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.131 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.124 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.073 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.640 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3681 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5018 ; 1.473 ; 1.938 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 438 ; 5.978 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 188 ;39.718 ;23.457 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 574 ;13.506 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 25 ;15.912 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 513 ; 0.118 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2930 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1891 ; 0.204 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2486 ; 0.310 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 441 ; 0.171 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 48 ; 0.173 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 30 ; 0.196 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2184 ; 0.838 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3546 ; 1.538 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1570 ; 2.859 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1469 ; 4.427 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -2 A 140 REMARK 3 ORIGIN FOR THE GROUP (A): 25.4590 64.3530 58.2060 REMARK 3 T TENSOR REMARK 3 T11: -0.0108 T22: -0.0035 REMARK 3 T33: -0.0337 T12: 0.0097 REMARK 3 T13: -0.0026 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.6369 L22: 0.4012 REMARK 3 L33: 0.1830 L12: 0.0434 REMARK 3 L13: 0.2120 L23: -0.0206 REMARK 3 S TENSOR REMARK 3 S11: -0.0110 S12: -0.0419 S13: 0.0319 REMARK 3 S21: 0.0425 S22: -0.0101 S23: 0.0281 REMARK 3 S31: -0.0081 S32: -0.0245 S33: 0.0211 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -6 B 140 REMARK 3 ORIGIN FOR THE GROUP (A): 42.2600 59.9340 44.1600 REMARK 3 T TENSOR REMARK 3 T11: -0.0242 T22: -0.0134 REMARK 3 T33: -0.0170 T12: -0.0095 REMARK 3 T13: 0.0196 T23: 0.0038 REMARK 3 L TENSOR REMARK 3 L11: 0.2815 L22: 0.8230 REMARK 3 L33: 0.5149 L12: 0.0620 REMARK 3 L13: 0.2327 L23: 0.3177 REMARK 3 S TENSOR REMARK 3 S11: -0.0199 S12: 0.0136 S13: -0.0004 REMARK 3 S21: -0.0675 S22: 0.0103 S23: -0.0862 REMARK 3 S31: -0.0250 S32: 0.0717 S33: 0.0096 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C -2 C 140 REMARK 3 ORIGIN FOR THE GROUP (A): 21.5980 54.3660 38.7560 REMARK 3 T TENSOR REMARK 3 T11: 0.0035 T22: -0.0193 REMARK 3 T33: -0.0344 T12: -0.0184 REMARK 3 T13: -0.0030 T23: 0.0048 REMARK 3 L TENSOR REMARK 3 L11: 0.3996 L22: 0.3186 REMARK 3 L33: 0.6421 L12: 0.1268 REMARK 3 L13: -0.2081 L23: -0.1251 REMARK 3 S TENSOR REMARK 3 S11: -0.0375 S12: 0.0262 S13: -0.0162 REMARK 3 S21: -0.0617 S22: 0.0249 S23: 0.0381 REMARK 3 S31: 0.0653 S32: -0.0189 S33: 0.0126 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3C6V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-FEB-08. REMARK 100 THE DEPOSITION ID IS D_1000046415. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-DEC-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97931 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43671 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 9.000 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 59.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.37000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 7.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXCD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 M AMMONIUM SULFATE, 100 MM TRIS-HCL REMARK 280 PH 8.5, 0.3M NDSB 221, 2MM L-CYSTEINE. CRYOPROTECTED WITH REMARK 280 PARATONE-N OIL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.56800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.25350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.45650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.25350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.56800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.45650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7600 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -20 REMARK 465 GLY A -19 REMARK 465 SER A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 ARG A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 MSE B -20 REMARK 465 GLY B -19 REMARK 465 SER B -18 REMARK 465 SER B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 SER B -10 REMARK 465 SER B -9 REMARK 465 GLY B -8 REMARK 465 ARG B -7 REMARK 465 MSE C -20 REMARK 465 GLY C -19 REMARK 465 SER C -18 REMARK 465 SER C -17 REMARK 465 HIS C -16 REMARK 465 HIS C -15 REMARK 465 HIS C -14 REMARK 465 HIS C -13 REMARK 465 HIS C -12 REMARK 465 HIS C -11 REMARK 465 SER C -10 REMARK 465 SER C -9 REMARK 465 GLY C -8 REMARK 465 ARG C -7 REMARK 465 GLU C -6 REMARK 465 ASN C -5 REMARK 465 LEU C -4 REMARK 465 TYR C -3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B -6 CB CG CD OE1 OE2 REMARK 470 ASN B -5 CB CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 251 O HOH A 255 1.88 REMARK 500 OE1 GLU C 95 O HOH C 460 2.01 REMARK 500 O HOH B 151 O HOH B 220 2.10 REMARK 500 O HOH A 230 O HOH C 492 2.13 REMARK 500 O HOH A 234 O HOH A 256 2.15 REMARK 500 O HOH C 433 O HOH C 502 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP B 76 OG SER C 19 3655 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 60 60.31 -153.05 REMARK 500 ASN B -5 -105.88 43.52 REMARK 500 ASN B 60 59.55 -149.96 REMARK 500 ASN C 60 59.85 -151.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 141 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR B -3 OH REMARK 620 2 ASP C 111 OD1 143.9 REMARK 620 3 ASP C 111 OD2 115.1 46.8 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 141 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 142 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL C 141 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC7354 RELATED DB: TARGETDB DBREF 3C6V A 1 140 UNP Q4WF74 Q4WF74_ASPFU 1 140 DBREF 3C6V B 1 140 UNP Q4WF74 Q4WF74_ASPFU 1 140 DBREF 3C6V C 1 140 UNP Q4WF74 Q4WF74_ASPFU 1 140 SEQADV 3C6V MSE A -20 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V GLY A -19 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V SER A -18 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V SER A -17 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V HIS A -16 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V HIS A -15 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V HIS A -14 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V HIS A -13 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V HIS A -12 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V HIS A -11 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V SER A -10 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V SER A -9 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V GLY A -8 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V ARG A -7 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V GLU A -6 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V ASN A -5 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V LEU A -4 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V TYR A -3 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V PHE A -2 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V GLN A -1 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V GLY A 0 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V MSE B -20 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V GLY B -19 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V SER B -18 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V SER B -17 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V HIS B -16 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V HIS B -15 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V HIS B -14 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V HIS B -13 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V HIS B -12 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V HIS B -11 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V SER B -10 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V SER B -9 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V GLY B -8 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V ARG B -7 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V GLU B -6 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V ASN B -5 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V LEU B -4 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V TYR B -3 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V PHE B -2 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V GLN B -1 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V GLY B 0 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V MSE C -20 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V GLY C -19 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V SER C -18 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V SER C -17 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V HIS C -16 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V HIS C -15 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V HIS C -14 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V HIS C -13 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V HIS C -12 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V HIS C -11 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V SER C -10 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V SER C -9 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V GLY C -8 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V ARG C -7 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V GLU C -6 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V ASN C -5 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V LEU C -4 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V TYR C -3 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V PHE C -2 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V GLN C -1 UNP Q4WF74 EXPRESSION TAG SEQADV 3C6V GLY C 0 UNP Q4WF74 EXPRESSION TAG SEQRES 1 A 161 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 161 ARG GLU ASN LEU TYR PHE GLN GLY MSE PRO ARG TRP LEU SEQRES 3 A 161 ILE GLN HIS SER PRO ASN THR LEU THR PRO GLU GLU LYS SEQRES 4 A 161 SER HIS LEU ALA GLN GLN ILE THR GLN ALA TYR VAL GLY SEQRES 5 A 161 PHE GLY LEU PRO ALA PHE TYR VAL GLN VAL HIS PHE ILE SEQRES 6 A 161 GLU GLN PRO ALA GLY THR SER PHE ILE GLY GLY GLU GLN SEQRES 7 A 161 HIS PRO ASN PHE VAL ALA LEU THR ILE TYR HIS LEU ALA SEQRES 8 A 161 ARG THR MSE THR SER ASP GLU GLN ARG GLN GLY PHE LEU SEQRES 9 A 161 LYS ARG ILE ASP ALA PHE LEU THR PRO MSE PHE GLU PRO SEQRES 10 A 161 LYS GLY ILE ASP TRP GLU TYR PHE VAL THR GLU ALA PRO SEQRES 11 A 161 ARG ASP LEU TRP LYS ILE ASN GLY LEU ALA PRO PRO ALA SEQRES 12 A 161 ALA GLY SER GLU GLU GLU LYS VAL TRP VAL ARG GLU ASN SEQRES 13 A 161 ARG PRO VAL ARG PHE SEQRES 1 B 161 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 161 ARG GLU ASN LEU TYR PHE GLN GLY MSE PRO ARG TRP LEU SEQRES 3 B 161 ILE GLN HIS SER PRO ASN THR LEU THR PRO GLU GLU LYS SEQRES 4 B 161 SER HIS LEU ALA GLN GLN ILE THR GLN ALA TYR VAL GLY SEQRES 5 B 161 PHE GLY LEU PRO ALA PHE TYR VAL GLN VAL HIS PHE ILE SEQRES 6 B 161 GLU GLN PRO ALA GLY THR SER PHE ILE GLY GLY GLU GLN SEQRES 7 B 161 HIS PRO ASN PHE VAL ALA LEU THR ILE TYR HIS LEU ALA SEQRES 8 B 161 ARG THR MSE THR SER ASP GLU GLN ARG GLN GLY PHE LEU SEQRES 9 B 161 LYS ARG ILE ASP ALA PHE LEU THR PRO MSE PHE GLU PRO SEQRES 10 B 161 LYS GLY ILE ASP TRP GLU TYR PHE VAL THR GLU ALA PRO SEQRES 11 B 161 ARG ASP LEU TRP LYS ILE ASN GLY LEU ALA PRO PRO ALA SEQRES 12 B 161 ALA GLY SER GLU GLU GLU LYS VAL TRP VAL ARG GLU ASN SEQRES 13 B 161 ARG PRO VAL ARG PHE SEQRES 1 C 161 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 C 161 ARG GLU ASN LEU TYR PHE GLN GLY MSE PRO ARG TRP LEU SEQRES 3 C 161 ILE GLN HIS SER PRO ASN THR LEU THR PRO GLU GLU LYS SEQRES 4 C 161 SER HIS LEU ALA GLN GLN ILE THR GLN ALA TYR VAL GLY SEQRES 5 C 161 PHE GLY LEU PRO ALA PHE TYR VAL GLN VAL HIS PHE ILE SEQRES 6 C 161 GLU GLN PRO ALA GLY THR SER PHE ILE GLY GLY GLU GLN SEQRES 7 C 161 HIS PRO ASN PHE VAL ALA LEU THR ILE TYR HIS LEU ALA SEQRES 8 C 161 ARG THR MSE THR SER ASP GLU GLN ARG GLN GLY PHE LEU SEQRES 9 C 161 LYS ARG ILE ASP ALA PHE LEU THR PRO MSE PHE GLU PRO SEQRES 10 C 161 LYS GLY ILE ASP TRP GLU TYR PHE VAL THR GLU ALA PRO SEQRES 11 C 161 ARG ASP LEU TRP LYS ILE ASN GLY LEU ALA PRO PRO ALA SEQRES 12 C 161 ALA GLY SER GLU GLU GLU LYS VAL TRP VAL ARG GLU ASN SEQRES 13 C 161 ARG PRO VAL ARG PHE MODRES 3C6V MSE A 1 MET SELENOMETHIONINE MODRES 3C6V MSE A 73 MET SELENOMETHIONINE MODRES 3C6V MSE A 93 MET SELENOMETHIONINE MODRES 3C6V MSE B 1 MET SELENOMETHIONINE MODRES 3C6V MSE B 73 MET SELENOMETHIONINE MODRES 3C6V MSE B 93 MET SELENOMETHIONINE MODRES 3C6V MSE C 1 MET SELENOMETHIONINE MODRES 3C6V MSE C 73 MET SELENOMETHIONINE MODRES 3C6V MSE C 93 MET SELENOMETHIONINE HET MSE A 1 16 HET MSE A 73 8 HET MSE A 93 8 HET MSE B 1 8 HET MSE B 73 8 HET MSE B 93 8 HET MSE C 1 8 HET MSE C 73 8 HET MSE C 93 8 HET NA B 141 1 HET SO4 B 142 5 HET CL C 141 1 HETNAM MSE SELENOMETHIONINE HETNAM NA SODIUM ION HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 4 NA NA 1+ FORMUL 5 SO4 O4 S 2- FORMUL 6 CL CL 1- FORMUL 7 HOH *567(H2 O) HELIX 1 1 THR A 14 PHE A 32 1 19 HELIX 2 2 PRO A 35 TYR A 38 5 4 HELIX 3 3 SER A 75 GLU A 95 1 21 HELIX 4 4 PRO A 96 GLY A 98 5 3 HELIX 5 5 PRO A 109 TRP A 113 5 5 HELIX 6 6 SER A 125 ASN A 135 1 11 HELIX 7 7 GLU B -6 PHE B -2 5 5 HELIX 8 8 THR B 14 GLY B 31 1 18 HELIX 9 9 PRO B 35 TYR B 38 5 4 HELIX 10 10 SER B 75 GLU B 95 1 21 HELIX 11 11 PRO B 96 GLY B 98 5 3 HELIX 12 12 PRO B 109 TRP B 113 5 5 HELIX 13 13 SER B 125 ASN B 135 1 11 HELIX 14 14 THR C 14 PHE C 32 1 19 HELIX 15 15 PRO C 35 TYR C 38 5 4 HELIX 16 16 SER C 75 GLU C 95 1 21 HELIX 17 17 PRO C 96 GLY C 98 5 3 HELIX 18 18 PRO C 109 TRP C 113 5 5 HELIX 19 19 SER C 125 ASN C 135 1 11 SHEET 1 A 7 LYS B 114 ILE B 115 0 SHEET 2 A 7 ASP A 100 ALA A 108 -1 N TYR A 103 O LYS B 114 SHEET 3 A 7 PHE A 61 LEU A 69 1 N LEU A 64 O GLU A 102 SHEET 4 A 7 ARG A 3 HIS A 8 -1 N ARG A 3 O TYR A 67 SHEET 5 A 7 GLN A 40 GLU A 45 1 O GLN A 40 N TRP A 4 SHEET 6 A 7 SER C 51 ILE C 53 -1 O PHE C 52 N VAL A 41 SHEET 7 A 7 GLU C 56 GLN C 57 -1 O GLU C 56 N ILE C 53 SHEET 1 B 7 GLU A 56 GLN A 57 0 SHEET 2 B 7 SER A 51 ILE A 53 -1 N ILE A 53 O GLU A 56 SHEET 3 B 7 GLN B 40 GLU B 45 -1 O VAL B 41 N PHE A 52 SHEET 4 B 7 ARG B 3 HIS B 8 1 N TRP B 4 O GLN B 40 SHEET 5 B 7 PHE B 61 LEU B 69 -1 O TYR B 67 N ARG B 3 SHEET 6 B 7 ASP B 100 ALA B 108 1 O GLU B 102 N LEU B 64 SHEET 7 B 7 LYS C 114 ILE C 115 -1 O LYS C 114 N TYR B 103 SHEET 1 C 6 LYS A 114 ILE A 115 0 SHEET 2 C 6 ASP C 100 ALA C 108 -1 O TYR C 103 N LYS A 114 SHEET 3 C 6 PHE C 61 LEU C 69 1 N LEU C 64 O GLU C 102 SHEET 4 C 6 ARG C 3 HIS C 8 -1 N ARG C 3 O TYR C 67 SHEET 5 C 6 GLN C 40 GLU C 45 1 O GLN C 40 N TRP C 4 SHEET 6 C 6 SER B 51 ILE B 53 -1 N PHE B 52 O VAL C 41 LINK OH TYR B -3 NA NA B 141 1555 1555 2.91 LINK OD1 ASP C 111 NA NA B 141 1555 1555 2.93 LINK OD2 ASP C 111 NA NA B 141 1555 1555 2.53 LINK C GLY A 0 N AMSE A 1 1555 1555 1.33 LINK C GLY A 0 N BMSE A 1 1555 1555 1.31 LINK C AMSE A 1 N PRO A 2 1555 1555 1.35 LINK C BMSE A 1 N PRO A 2 1555 1555 1.34 LINK C THR A 72 N MSE A 73 1555 1555 1.33 LINK C MSE A 73 N THR A 74 1555 1555 1.32 LINK C PRO A 92 N MSE A 93 1555 1555 1.34 LINK C MSE A 93 N PHE A 94 1555 1555 1.33 LINK C GLY B 0 N MSE B 1 1555 1555 1.34 LINK C MSE B 1 N PRO B 2 1555 1555 1.35 LINK C THR B 72 N MSE B 73 1555 1555 1.34 LINK C MSE B 73 N THR B 74 1555 1555 1.33 LINK C PRO B 92 N MSE B 93 1555 1555 1.33 LINK C MSE B 93 N PHE B 94 1555 1555 1.33 LINK C GLY C 0 N MSE C 1 1555 1555 1.32 LINK C MSE C 1 N PRO C 2 1555 1555 1.37 LINK C THR C 72 N MSE C 73 1555 1555 1.33 LINK C MSE C 73 N THR C 74 1555 1555 1.33 LINK C PRO C 92 N MSE C 93 1555 1555 1.33 LINK C MSE C 93 N PHE C 94 1555 1555 1.33 CISPEP 1 GLY B 0 MSE B 1 0 8.32 CISPEP 2 MSE B 1 PRO B 2 0 -9.79 SITE 1 AC1 3 TYR B -3 ARG B 71 ASP C 111 SITE 1 AC2 3 ARG B 136 VAL B 138 ARG B 139 SITE 1 AC3 1 HOH C 350 CRYST1 59.136 66.913 128.507 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016910 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014945 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007782 0.00000