HEADER UNKNOWN FUNCTION 12-FEB-08 3C8L TITLE CRYSTAL STRUCTURE OF A FTSZ-LIKE PROTEIN OF UNKNOWN FUNCTION TITLE 2 (NPUN_R1471) FROM NOSTOC PUNCTIFORME PCC 73102 AT 1.22 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: FTSZ-LIKE PROTEIN OF UNKNOWN FUNCTION; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NOSTOC PUNCTIFORME; SOURCE 3 ORGANISM_TAXID: 63737; SOURCE 4 STRAIN: PCC 73102; SOURCE 5 GENE: ZP_00109722.1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, PSI-2, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 7 01-FEB-23 3C8L 1 REMARK SEQADV REVDAT 6 24-JUL-19 3C8L 1 REMARK LINK REVDAT 5 25-OCT-17 3C8L 1 REMARK REVDAT 4 13-JUL-11 3C8L 1 VERSN REVDAT 3 23-MAR-11 3C8L 1 HEADER TITLE KEYWDS REVDAT 2 24-FEB-09 3C8L 1 VERSN REVDAT 1 19-FEB-08 3C8L 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF FTSZ-LIKE PROTEIN OF UNKNOWN FUNCTION JRNL TITL 2 (ZP_00109722.1) FROM NOSTOC PUNCTIFORME PCC 73102 AT 1.22 A JRNL TITL 3 RESOLUTION. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.22 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.22 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.07 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 65514 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.184 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3334 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.22 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.25 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4376 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.20 REMARK 3 BIN R VALUE (WORKING SET) : 0.2670 REMARK 3 BIN FREE R VALUE SET COUNT : 246 REMARK 3 BIN FREE R VALUE : 0.2970 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1783 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 44 REMARK 3 SOLVENT ATOMS : 243 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.54 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.26000 REMARK 3 B22 (A**2) : -0.25000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.046 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.044 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.028 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.418 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2072 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1351 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2864 ; 1.746 ; 1.985 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3368 ; 1.085 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 300 ; 3.651 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 79 ;32.548 ;25.063 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 362 ; 9.544 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;14.550 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 343 ; 0.110 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2364 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 374 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 365 ; 0.207 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1489 ; 0.196 ; 0.300 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1002 ; 0.161 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): 1071 ; 0.086 ; 0.500 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 278 ; 0.148 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 22 ; 0.158 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): 51 ; 0.232 ; 0.300 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 57 ; 0.152 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1392 ; 1.725 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 529 ; 0.764 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2185 ; 2.253 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 777 ; 2.107 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 658 ; 2.952 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3672 ; 1.220 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 246 ; 6.241 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 3370 ; 2.982 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY REMARK 3 OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 REMARK 3 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. REMARK 3 3. CHLORIDE, SULFATE, IMIDAZOLE AND GLYCEROL WERE MODELED BASED REMARK 3 ON PURIFICATION, CRYSTALLIZATION AND CRYOPROTECTION CONDITIONS. REMARK 4 REMARK 4 3C8L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-FEB-08. REMARK 100 THE DEPOSITION ID IS D_1000046477. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JAN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837, 0.97978, 0.97964 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : FLAT COLLIMATING MIRROR, TOROID REMARK 200 FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 65528 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.220 REMARK 200 RESOLUTION RANGE LOW (A) : 44.065 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.22 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.51800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHELXD, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NANODROP, 2.0M (NH4)2SO4, 0.1M TRIS REMARK 280 -HCL PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.52000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 37.52000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 37.70900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 39.31400 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 37.70900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 39.31400 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 37.52000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 37.70900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 39.31400 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 37.52000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 37.70900 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 39.31400 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9270 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 75.04000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 186 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 176 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 230 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 121 REMARK 465 GLU B 119 REMARK 465 ASN B 120 REMARK 465 GLU B 121 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 48 OG REMARK 470 ARG A 95 CD NE CZ NH1 NH2 REMARK 470 LYS A 103 CE NZ REMARK 470 ILE A 118 CD1 REMARK 470 ARG B 3 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 4 CG CD CE NZ REMARK 470 GLU B 43 CD OE1 OE2 REMARK 470 SER B 48 OG REMARK 470 ASN B 51 CG OD1 ND2 REMARK 470 ARG B 80 CZ NH1 NH2 REMARK 470 LYS B 103 CE NZ REMARK 470 ILE B 118 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 3 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 3 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 6 -61.21 -102.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 122 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 123 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 124 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 122 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 123 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 124 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IMD A 125 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IMD B 125 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 126 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 126 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 381788 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 1. THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE FOLLOWED BY THE TARGET SEQUENCE. REMARK 999 2. THE SEQUENCE OF THIS PROTEIN WAS NOT AVAILABLE AT THE REMARK 999 UNIPROT KNOWLEDGEBASE DATABASE (UNIPROTKB) AT THE TIME OF REMARK 999 DEPOSITION. THE SEQUENCE INFORMATION IS AVAILABLE AT GENBANK REMARK 999 WITH ACCESSION CODE ZP_00109722.1 AND FROM THE UNIPROT REMARK 999 ARCHIVE (UNIPARC) WITH ACCESSION CODE UPI000038D0CC. DBREF 3C8L A 1 121 PDB 3C8L 3C8L 1 121 DBREF 3C8L B 1 121 PDB 3C8L 3C8L 1 121 SEQADV 3C8L GLY A 0 PDB 3C8L EXPRESSION TAG SEQADV 3C8L GLY B 0 PDB 3C8L EXPRESSION TAG SEQRES 1 A 122 GLY MSE ALA ARG LYS ARG LEU ILE ILE GLU MSE GLY MSE SEQRES 2 A 122 GLY ILE ASP GLN HIS GLY GLN GLU PRO THR ILE ALA ALA SEQRES 3 A 122 SER ARG ALA VAL ARG ASN ALA ILE ALA HIS ASN ALA LEU SEQRES 4 A 122 PRO GLY VAL TRP GLU VAL ALA GLY LEU SER HIS PRO ASN SEQRES 5 A 122 GLU MSE ILE ILE GLU VAL GLN VAL ALA VAL PRO TYR PRO SEQRES 6 A 122 GLU GLN VAL ARG GLU GLU GLU VAL LEU ALA VAL LEU PRO SEQRES 7 A 122 PHE GLY ARG LYS THR LEU THR VAL GLU SER GLY GLY MSE SEQRES 8 A 122 ILE VAL GLN GLY ARG ALA ILE PRO GLU LEU ASN ASP LYS SEQRES 9 A 122 ASN ASP GLU MSE LEU ILE ALA ILE ALA ALA VAL THR VAL SEQRES 10 A 122 LEU ILE GLU ASN GLU SEQRES 1 B 122 GLY MSE ALA ARG LYS ARG LEU ILE ILE GLU MSE GLY MSE SEQRES 2 B 122 GLY ILE ASP GLN HIS GLY GLN GLU PRO THR ILE ALA ALA SEQRES 3 B 122 SER ARG ALA VAL ARG ASN ALA ILE ALA HIS ASN ALA LEU SEQRES 4 B 122 PRO GLY VAL TRP GLU VAL ALA GLY LEU SER HIS PRO ASN SEQRES 5 B 122 GLU MSE ILE ILE GLU VAL GLN VAL ALA VAL PRO TYR PRO SEQRES 6 B 122 GLU GLN VAL ARG GLU GLU GLU VAL LEU ALA VAL LEU PRO SEQRES 7 B 122 PHE GLY ARG LYS THR LEU THR VAL GLU SER GLY GLY MSE SEQRES 8 B 122 ILE VAL GLN GLY ARG ALA ILE PRO GLU LEU ASN ASP LYS SEQRES 9 B 122 ASN ASP GLU MSE LEU ILE ALA ILE ALA ALA VAL THR VAL SEQRES 10 B 122 LEU ILE GLU ASN GLU MODRES 3C8L MSE A 1 MET SELENOMETHIONINE MODRES 3C8L MSE A 10 MET SELENOMETHIONINE MODRES 3C8L MSE A 12 MET SELENOMETHIONINE MODRES 3C8L MSE A 53 MET SELENOMETHIONINE MODRES 3C8L MSE A 90 MET SELENOMETHIONINE MODRES 3C8L MSE A 107 MET SELENOMETHIONINE MODRES 3C8L MSE B 1 MET SELENOMETHIONINE MODRES 3C8L MSE B 10 MET SELENOMETHIONINE MODRES 3C8L MSE B 12 MET SELENOMETHIONINE MODRES 3C8L MSE B 53 MET SELENOMETHIONINE MODRES 3C8L MSE B 90 MET SELENOMETHIONINE MODRES 3C8L MSE B 107 MET SELENOMETHIONINE HET MSE A 1 13 HET MSE A 10 8 HET MSE A 12 8 HET MSE A 53 16 HET MSE A 90 8 HET MSE A 107 13 HET MSE B 1 16 HET MSE B 10 8 HET MSE B 12 8 HET MSE B 53 13 HET MSE B 90 8 HET MSE B 107 8 HET SO4 A 122 5 HET SO4 A 123 5 HET CL A 124 1 HET IMD A 125 5 HET GOL A 126 6 HET SO4 B 122 5 HET SO4 B 123 5 HET CL B 124 1 HET IMD B 125 5 HET GOL B 126 6 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION HETNAM IMD IMIDAZOLE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 3 SO4 4(O4 S 2-) FORMUL 5 CL 2(CL 1-) FORMUL 6 IMD 2(C3 H5 N2 1+) FORMUL 7 GOL 2(C3 H8 O3) FORMUL 13 HOH *243(H2 O) HELIX 1 1 GLU A 20 ALA A 34 1 15 HELIX 2 2 GLY A 40 GLY A 46 1 7 HELIX 3 3 HIS A 49 GLU A 52 5 4 HELIX 4 4 TYR A 63 VAL A 67 5 5 HELIX 5 5 ARG A 68 ALA A 74 1 7 HELIX 6 6 ILE A 97 ASN A 101 5 5 HELIX 7 7 GLU B 20 ALA B 34 1 15 HELIX 8 8 GLY B 40 ALA B 45 1 6 HELIX 9 9 HIS B 49 GLU B 52 5 4 HELIX 10 10 TYR B 63 VAL B 67 5 5 HELIX 11 11 ARG B 68 ALA B 74 1 7 HELIX 12 12 ILE B 97 ASN B 101 5 5 SHEET 1 A 4 ARG A 3 ASP A 15 0 SHEET 2 A 4 GLU A 106 GLU A 119 -1 O VAL A 114 N GLU A 9 SHEET 3 A 4 ILE A 54 VAL A 61 -1 N GLU A 56 O THR A 115 SHEET 4 A 4 ARG A 80 SER A 87 1 O THR A 82 N VAL A 57 SHEET 1 B 3 ARG A 3 ASP A 15 0 SHEET 2 B 3 GLU A 106 GLU A 119 -1 O VAL A 114 N GLU A 9 SHEET 3 B 3 MSE A 90 GLN A 93 -1 N MSE A 90 O ILE A 109 SHEET 1 C 4 LYS B 4 ASP B 15 0 SHEET 2 C 4 GLU B 106 ILE B 118 -1 O VAL B 114 N GLU B 9 SHEET 3 C 4 ILE B 54 VAL B 61 -1 N GLU B 56 O THR B 115 SHEET 4 C 4 ARG B 80 SER B 87 1 O THR B 82 N VAL B 57 SHEET 1 D 3 LYS B 4 ASP B 15 0 SHEET 2 D 3 GLU B 106 ILE B 118 -1 O VAL B 114 N GLU B 9 SHEET 3 D 3 MSE B 90 GLN B 93 -1 N MSE B 90 O ILE B 109 LINK C GLY A 0 N MSE A 1 1555 1555 1.32 LINK C MSE A 1 N ALA A 2 1555 1555 1.32 LINK C GLU A 9 N MSE A 10 1555 1555 1.33 LINK C MSE A 10 N GLY A 11 1555 1555 1.32 LINK C GLY A 11 N MSE A 12 1555 1555 1.33 LINK C MSE A 12 N GLY A 13 1555 1555 1.33 LINK C GLU A 52 N AMSE A 53 1555 1555 1.33 LINK C GLU A 52 N BMSE A 53 1555 1555 1.34 LINK C AMSE A 53 N ILE A 54 1555 1555 1.32 LINK C BMSE A 53 N ILE A 54 1555 1555 1.33 LINK C GLY A 89 N MSE A 90 1555 1555 1.33 LINK C MSE A 90 N ILE A 91 1555 1555 1.33 LINK C GLU A 106 N MSE A 107 1555 1555 1.33 LINK C MSE A 107 N LEU A 108 1555 1555 1.33 LINK C GLY B 0 N AMSE B 1 1555 1555 1.33 LINK C GLY B 0 N BMSE B 1 1555 1555 1.33 LINK C AMSE B 1 N ALA B 2 1555 1555 1.33 LINK C BMSE B 1 N ALA B 2 1555 1555 1.33 LINK C GLU B 9 N MSE B 10 1555 1555 1.33 LINK C MSE B 10 N GLY B 11 1555 1555 1.32 LINK C GLY B 11 N MSE B 12 1555 1555 1.32 LINK C MSE B 12 N GLY B 13 1555 1555 1.33 LINK C GLU B 52 N MSE B 53 1555 1555 1.34 LINK C MSE B 53 N ILE B 54 1555 1555 1.33 LINK C GLY B 89 N MSE B 90 1555 1555 1.33 LINK C MSE B 90 N ILE B 91 1555 1555 1.33 LINK C GLU B 106 N MSE B 107 1555 1555 1.33 LINK C MSE B 107 N LEU B 108 1555 1555 1.33 SITE 1 AC1 8 LYS A 4 ARG A 5 HOH A 143 HOH A 160 SITE 2 AC1 8 HOH A 230 HOH A 234 HOH A 254 ARG B 95 SITE 1 AC2 7 GLY A 0 HOH A 246 HOH A 255 THR B 82 SITE 2 AC2 7 LEU B 83 HOH B 146 HOH B 161 SITE 1 AC3 4 ILE A 14 ASN A 31 HOH A 158 HIS B 35 SITE 1 AC4 6 HOH A 180 ARG B 3 LYS B 4 ARG B 5 SITE 2 AC4 6 HOH B 183 HOH B 206 SITE 1 AC5 4 ASN A 31 ASN B 31 HOH B 179 HOH B 197 SITE 1 AC6 3 HIS A 35 ILE B 14 HOH B 145 SITE 1 AC7 5 GLU A 9 ILE A 33 LEU A 38 HOH A 213 SITE 2 AC7 5 HOH A 243 SITE 1 AC8 5 GLU B 9 ILE B 33 ILE B 55 HOH B 160 SITE 2 AC8 5 HOH B 186 SITE 1 AC9 7 GLU A 86 SER A 87 HOH A 260 GLY B 88 SITE 2 AC9 7 GLY B 89 MSE B 90 ILE B 91 SITE 1 BC1 9 GLN A 19 GLU A 20 GLN A 66 HOH A 147 SITE 2 BC1 9 GLU B 65 GLN B 66 VAL B 67 HOH B 128 SITE 3 BC1 9 HOH B 154 CRYST1 75.418 78.628 75.040 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013259 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012718 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013326 0.00000