data_3C9L
#
_entry.id 3C9L
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.377
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 3C9L pdb_00003c9l 10.2210/pdb3c9l/pdb
RCSB RCSB046513 ? ?
WWPDB D_1000046513 ? ?
#
_pdbx_database_related.db_name PDB
_pdbx_database_related.db_id 1GZM
_pdbx_database_related.details
;THIS ENTRY 3C9L REFLECTS AN ALTERNATIVE MODELING OF X-RAY DATA R1GZMSF. Diffraction data and coordinates for 1GZM were transformed to space group P6(4).
;
_pdbx_database_related.content_type re-refinement
#
_pdbx_database_status.entry_id 3C9L
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.recvd_initial_deposition_date 2008-02-16
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.status_code_nmr_data ?
#
_audit_author.name 'Stenkamp, R.E.'
_audit_author.pdbx_ordinal 1
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.journal_id_ASTM
_citation.country
_citation.journal_id_ISSN
_citation.journal_id_CSD
_citation.book_publisher
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'Alternative models for two crystal structures of bovine rhodopsin.' 'Acta Crystallogr.,Sect.D'
64 902 904 2008 ABCRE6 DK 0907-4449 0766 ? 18645239 10.1107/S0907444908017162
original_data_1 'Structure of bovine rhodopsin in a trigonal crystal form.' J.Mol.Biol.
343 1409 1438 2004 JMOBAK UK 0022-2836 0070 ? 15491621 10.1016/j.jmb.2004.08.090
original_data_2 'Crystals of native and modified bovine rhodopsins and their heavy atom derivatives.' J.Mol.Biol.
343 1439 1450 2004 JMOBAK UK 0022-2836 0070 ? ? ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Stenkamp, R.E.' 1 ?
original_data_1 'Li, J.' 2 ?
original_data_1 'Edwards, P.C.' 3 ?
original_data_1 'Burghammer, M.' 4 ?
original_data_1 'Villa, C.' 5 ?
original_data_1 'Schertler, G.F.' 6 ?
original_data_2 'Edwards, P.C.' 7 ?
original_data_2 'Li, J.' 8 ?
original_data_2 'Burghammer, M.' 9 ?
original_data_2 'McDowell, J.H.' 10 ?
original_data_2 'Villa, C.' 11 ?
original_data_2 'Hargrave, P.A.' 12 ?
original_data_2 'Schertler, G.F.' 13 ?
#
_cell.entry_id 3C9L
_cell.length_a 103.820
_cell.length_b 103.820
_cell.length_c 76.590
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 120.00
_cell.Z_PDB 6
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 3C9L
_symmetry.space_group_name_H-M 'P 64'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 172
_symmetry.space_group_name_Hall ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer nat Rhodopsin 39031.457 1 ? ? ? ?
2 branched man
'beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 586.542 2
? ? ? ?
3 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ?
4 non-polymer syn 'ACETYL GROUP' 44.053 1 ? ? ? ?
5 non-polymer syn RETINAL 284.436 1 ? ? ? ?
6 non-polymer syn 'PALMITIC ACID' 256.424 2 ? ? ? ?
7 non-polymer syn DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE 691.959 1 ? ? ? ?
8 non-polymer syn 'LAURYL DIMETHYLAMINE-N-OXIDE' 229.402 1 ? ? ? ?
9 non-polymer syn '(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE' 306.438 6 ? ? ? ?
10 water nat water 18.015 20 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code
;MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLA
VADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFT
WVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQES
ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTT
LCCGKNPLGDDEASTTVSKTETSQVAPA
;
_entity_poly.pdbx_seq_one_letter_code_can
;MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLA
VADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFT
WVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQES
ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTT
LCCGKNPLGDDEASTTVSKTETSQVAPA
;
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET n
1 2 ASN n
1 3 GLY n
1 4 THR n
1 5 GLU n
1 6 GLY n
1 7 PRO n
1 8 ASN n
1 9 PHE n
1 10 TYR n
1 11 VAL n
1 12 PRO n
1 13 PHE n
1 14 SER n
1 15 ASN n
1 16 LYS n
1 17 THR n
1 18 GLY n
1 19 VAL n
1 20 VAL n
1 21 ARG n
1 22 SER n
1 23 PRO n
1 24 PHE n
1 25 GLU n
1 26 ALA n
1 27 PRO n
1 28 GLN n
1 29 TYR n
1 30 TYR n
1 31 LEU n
1 32 ALA n
1 33 GLU n
1 34 PRO n
1 35 TRP n
1 36 GLN n
1 37 PHE n
1 38 SER n
1 39 MET n
1 40 LEU n
1 41 ALA n
1 42 ALA n
1 43 TYR n
1 44 MET n
1 45 PHE n
1 46 LEU n
1 47 LEU n
1 48 ILE n
1 49 MET n
1 50 LEU n
1 51 GLY n
1 52 PHE n
1 53 PRO n
1 54 ILE n
1 55 ASN n
1 56 PHE n
1 57 LEU n
1 58 THR n
1 59 LEU n
1 60 TYR n
1 61 VAL n
1 62 THR n
1 63 VAL n
1 64 GLN n
1 65 HIS n
1 66 LYS n
1 67 LYS n
1 68 LEU n
1 69 ARG n
1 70 THR n
1 71 PRO n
1 72 LEU n
1 73 ASN n
1 74 TYR n
1 75 ILE n
1 76 LEU n
1 77 LEU n
1 78 ASN n
1 79 LEU n
1 80 ALA n
1 81 VAL n
1 82 ALA n
1 83 ASP n
1 84 LEU n
1 85 PHE n
1 86 MET n
1 87 VAL n
1 88 PHE n
1 89 GLY n
1 90 GLY n
1 91 PHE n
1 92 THR n
1 93 THR n
1 94 THR n
1 95 LEU n
1 96 TYR n
1 97 THR n
1 98 SER n
1 99 LEU n
1 100 HIS n
1 101 GLY n
1 102 TYR n
1 103 PHE n
1 104 VAL n
1 105 PHE n
1 106 GLY n
1 107 PRO n
1 108 THR n
1 109 GLY n
1 110 CYS n
1 111 ASN n
1 112 LEU n
1 113 GLU n
1 114 GLY n
1 115 PHE n
1 116 PHE n
1 117 ALA n
1 118 THR n
1 119 LEU n
1 120 GLY n
1 121 GLY n
1 122 GLU n
1 123 ILE n
1 124 ALA n
1 125 LEU n
1 126 TRP n
1 127 SER n
1 128 LEU n
1 129 VAL n
1 130 VAL n
1 131 LEU n
1 132 ALA n
1 133 ILE n
1 134 GLU n
1 135 ARG n
1 136 TYR n
1 137 VAL n
1 138 VAL n
1 139 VAL n
1 140 CYS n
1 141 LYS n
1 142 PRO n
1 143 MET n
1 144 SER n
1 145 ASN n
1 146 PHE n
1 147 ARG n
1 148 PHE n
1 149 GLY n
1 150 GLU n
1 151 ASN n
1 152 HIS n
1 153 ALA n
1 154 ILE n
1 155 MET n
1 156 GLY n
1 157 VAL n
1 158 ALA n
1 159 PHE n
1 160 THR n
1 161 TRP n
1 162 VAL n
1 163 MET n
1 164 ALA n
1 165 LEU n
1 166 ALA n
1 167 CYS n
1 168 ALA n
1 169 ALA n
1 170 PRO n
1 171 PRO n
1 172 LEU n
1 173 VAL n
1 174 GLY n
1 175 TRP n
1 176 SER n
1 177 ARG n
1 178 TYR n
1 179 ILE n
1 180 PRO n
1 181 GLU n
1 182 GLY n
1 183 MET n
1 184 GLN n
1 185 CYS n
1 186 SER n
1 187 CYS n
1 188 GLY n
1 189 ILE n
1 190 ASP n
1 191 TYR n
1 192 TYR n
1 193 THR n
1 194 PRO n
1 195 HIS n
1 196 GLU n
1 197 GLU n
1 198 THR n
1 199 ASN n
1 200 ASN n
1 201 GLU n
1 202 SER n
1 203 PHE n
1 204 VAL n
1 205 ILE n
1 206 TYR n
1 207 MET n
1 208 PHE n
1 209 VAL n
1 210 VAL n
1 211 HIS n
1 212 PHE n
1 213 ILE n
1 214 ILE n
1 215 PRO n
1 216 LEU n
1 217 ILE n
1 218 VAL n
1 219 ILE n
1 220 PHE n
1 221 PHE n
1 222 CYS n
1 223 TYR n
1 224 GLY n
1 225 GLN n
1 226 LEU n
1 227 VAL n
1 228 PHE n
1 229 THR n
1 230 VAL n
1 231 LYS n
1 232 GLU n
1 233 ALA n
1 234 ALA n
1 235 ALA n
1 236 GLN n
1 237 GLN n
1 238 GLN n
1 239 GLU n
1 240 SER n
1 241 ALA n
1 242 THR n
1 243 THR n
1 244 GLN n
1 245 LYS n
1 246 ALA n
1 247 GLU n
1 248 LYS n
1 249 GLU n
1 250 VAL n
1 251 THR n
1 252 ARG n
1 253 MET n
1 254 VAL n
1 255 ILE n
1 256 ILE n
1 257 MET n
1 258 VAL n
1 259 ILE n
1 260 ALA n
1 261 PHE n
1 262 LEU n
1 263 ILE n
1 264 CYS n
1 265 TRP n
1 266 LEU n
1 267 PRO n
1 268 TYR n
1 269 ALA n
1 270 GLY n
1 271 VAL n
1 272 ALA n
1 273 PHE n
1 274 TYR n
1 275 ILE n
1 276 PHE n
1 277 THR n
1 278 HIS n
1 279 GLN n
1 280 GLY n
1 281 SER n
1 282 ASP n
1 283 PHE n
1 284 GLY n
1 285 PRO n
1 286 ILE n
1 287 PHE n
1 288 MET n
1 289 THR n
1 290 ILE n
1 291 PRO n
1 292 ALA n
1 293 PHE n
1 294 PHE n
1 295 ALA n
1 296 LYS n
1 297 THR n
1 298 SER n
1 299 ALA n
1 300 VAL n
1 301 TYR n
1 302 ASN n
1 303 PRO n
1 304 VAL n
1 305 ILE n
1 306 TYR n
1 307 ILE n
1 308 MET n
1 309 MET n
1 310 ASN n
1 311 LYS n
1 312 GLN n
1 313 PHE n
1 314 ARG n
1 315 ASN n
1 316 CYS n
1 317 MET n
1 318 VAL n
1 319 THR n
1 320 THR n
1 321 LEU n
1 322 CYS n
1 323 CYS n
1 324 GLY n
1 325 LYS n
1 326 ASN n
1 327 PRO n
1 328 LEU n
1 329 GLY n
1 330 ASP n
1 331 ASP n
1 332 GLU n
1 333 ALA n
1 334 SER n
1 335 THR n
1 336 THR n
1 337 VAL n
1 338 SER n
1 339 LYS n
1 340 THR n
1 341 GLU n
1 342 THR n
1 343 SER n
1 344 GLN n
1 345 VAL n
1 346 ALA n
1 347 PRO n
1 348 ALA n
#
_entity_src_nat.entity_id 1
_entity_src_nat.pdbx_src_id 1
_entity_src_nat.pdbx_alt_source_flag sample
_entity_src_nat.pdbx_beg_seq_num ?
_entity_src_nat.pdbx_end_seq_num ?
_entity_src_nat.common_name Bovine
_entity_src_nat.pdbx_organism_scientific 'Bos taurus'
_entity_src_nat.pdbx_ncbi_taxonomy_id ?
_entity_src_nat.genus ?
_entity_src_nat.species ?
_entity_src_nat.strain ?
_entity_src_nat.tissue ?
_entity_src_nat.tissue_fraction ?
_entity_src_nat.pdbx_secretion ?
_entity_src_nat.pdbx_fragment ?
_entity_src_nat.pdbx_variant ?
_entity_src_nat.pdbx_cell_line ?
_entity_src_nat.pdbx_atcc ?
_entity_src_nat.pdbx_cellular_location ?
_entity_src_nat.pdbx_organ ?
_entity_src_nat.pdbx_organelle ?
_entity_src_nat.pdbx_cell ?
_entity_src_nat.pdbx_plasmid_name ?
_entity_src_nat.pdbx_plasmid_details ?
_entity_src_nat.details ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code OPSD_BOVIN
_struct_ref.pdbx_db_accession P02699
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code
;MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLA
VADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFT
WVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQES
ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTT
LCCGKNPLGDDEASTTVSKTETSQVAPA
;
_struct_ref.pdbx_align_begin 1
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 3C9L
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 348
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession P02699
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 348
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 348
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6'
180.156
C8E non-polymer . '(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE' ? 'C16 H34 O5' 306.438
CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LDA non-polymer . 'LAURYL DIMETHYLAMINE-N-OXIDE' ? 'C14 H31 N O' 229.402
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose
;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
;
'C8 H15 N O6' 221.208
PEF non-polymer . DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE
'3-[AMINOETHYLPHOSPHORYL]-[1,2-DI-PALMITOYL]-SN-GLYCEROL' 'C37 H74 N O8 P' 691.959
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PLM non-polymer . 'PALMITIC ACID' ? 'C16 H32 O2' 256.424
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
RET non-polymer . RETINAL ? 'C20 H28 O' 284.436
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409
#
_exptl.entry_id 3C9L
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number ?
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 3.05
_exptl_crystal.density_percent_sol 59.71
_exptl_crystal.description 'AUTHOR USED THE SF DATA FROM ENTRY 1GZM.'
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_diffrn.id 1
_diffrn.ambient_temp ?
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength .
_diffrn_radiation_wavelength.wt 1.0
#
_refine.entry_id 3C9L
_refine.ls_d_res_high 2.646
_refine.ls_d_res_low 44.955
_refine.pdbx_ls_sigma_F 1.99
_refine.ls_percent_reflns_obs 99.790
_refine.ls_number_reflns_obs 13785
_refine.ls_R_factor_obs 0.190
_refine.ls_R_factor_R_work 0.188
_refine.ls_R_factor_R_free 0.216
_refine.ls_percent_reflns_R_free 4.990
_refine.ls_number_reflns_R_free 688
_refine.ls_number_reflns_R_work 13097
_refine.B_iso_mean 68.097
_refine.solvent_model_param_bsol 63.171
_refine.solvent_model_param_ksol 0.300
_refine.aniso_B[1][1] 4.640
_refine.aniso_B[2][2] 4.640
_refine.aniso_B[3][3] -9.281
_refine.aniso_B[1][2] 0.000
_refine.aniso_B[1][3] 0.000
_refine.aniso_B[2][3] -0.000
_refine.overall_SU_ML 0.360
_refine.solvent_model_details 'FLAT BULK SOLVENT MODEL'
_refine.pdbx_solvent_vdw_probe_radii 1.110
_refine.pdbx_solvent_shrinkage_radii 0.900
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_stereochemistry_target_values ML
_refine.overall_FOM_work_R_set 0.873
_refine.B_iso_max 189.92
_refine.B_iso_min 37.72
_refine.pdbx_overall_phase_error 20.180
_refine.occupancy_max 1.00
_refine.occupancy_min 0.54
_refine.pdbx_starting_model
'The A chain of PDB entry 1GZM, after suitable transformation to this space group.'
_refine.ls_R_factor_all ?
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.ls_redundancy_reflns_obs ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_ls_cross_valid_method ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.overall_SU_B ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.details ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 2603
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 265
_refine_hist.number_atoms_solvent 20
_refine_hist.number_atoms_total 2888
_refine_hist.d_res_high 2.646
_refine_hist.d_res_low 44.955
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
f_bond_d 0.008 ? ? 2947 'X-RAY DIFFRACTION' ?
f_angle_d 1.227 ? ? 3965 'X-RAY DIFFRACTION' ?
f_dihedral_angle_d 25.664 ? ? 1082 'X-RAY DIFFRACTION' ?
f_chiral_restr 0.069 ? ? 432 'X-RAY DIFFRACTION' ?
f_plane_restr 0.006 ? ? 465 'X-RAY DIFFRACTION' ?
#
loop_
_refine_ls_shell.d_res_high
_refine_ls_shell.d_res_low
_refine_ls_shell.pdbx_total_number_of_bins_used
_refine_ls_shell.percent_reflns_obs
_refine_ls_shell.number_reflns_R_work
_refine_ls_shell.R_factor_all
_refine_ls_shell.R_factor_R_work
_refine_ls_shell.R_factor_R_free
_refine_ls_shell.percent_reflns_R_free
_refine_ls_shell.number_reflns_R_free
_refine_ls_shell.R_factor_R_free_error
_refine_ls_shell.number_reflns_all
_refine_ls_shell.number_reflns_obs
_refine_ls_shell.redundancy_reflns_obs
_refine_ls_shell.pdbx_refine_id
2.646 2.850 5 99.000 2568 . 0.241 0.277 . 144 . 2712 . . 'X-RAY DIFFRACTION'
2.850 3.137 5 100.000 2633 . 0.208 0.249 . 123 . 2756 . . 'X-RAY DIFFRACTION'
3.137 3.591 5 100.000 2581 . 0.179 0.241 . 155 . 2736 . . 'X-RAY DIFFRACTION'
3.591 4.524 5 100.000 2635 . 0.150 0.168 . 139 . 2774 . . 'X-RAY DIFFRACTION'
4.524 44.962 5 100.000 2680 . 0.194 0.206 . 127 . 2807 . . 'X-RAY DIFFRACTION'
#
_struct.entry_id 3C9L
_struct.title 'Structure of ground-state bovine rhodospin in a hexagonal crystal form'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 3C9L
_struct_keywords.pdbx_keywords 'SIGNALING PROTEIN'
_struct_keywords.text
;photoreceptor, retinal protein, visual pigment, G-protein coupled receptor, integral membrane protein, palmitate, phosphorylation, alternate space group, Chromophore, Glycoprotein, Lipoprotein, Phosphoprotein, Photoreceptor protein, Sensory transduction, Transducer, Transmembrane, Vision, SIGNALING PROTEIN
;
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 2 ?
D N N 3 ?
E N N 4 ?
F N N 5 ?
G N N 6 ?
H N N 6 ?
I N N 7 ?
J N N 8 ?
K N N 9 ?
L N N 9 ?
M N N 9 ?
N N N 9 ?
O N N 9 ?
P N N 9 ?
Q N N 10 ?
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 1 GLU A 33 ? HIS A 65 ? GLU A 33 HIS A 65 1 ? 33
HELX_P HELX_P2 2 THR A 70 ? GLY A 90 ? THR A 70 GLY A 90 1 ? 21
HELX_P HELX_P3 3 GLY A 90 ? GLY A 101 ? GLY A 90 GLY A 101 1 ? 12
HELX_P HELX_P4 4 PHE A 105 ? LYS A 141 ? PHE A 105 LYS A 141 1 ? 37
HELX_P HELX_P5 5 GLY A 149 ? ALA A 169 ? GLY A 149 ALA A 169 1 ? 21
HELX_P HELX_P6 6 PRO A 170 ? VAL A 173 ? PRO A 170 VAL A 173 5 ? 4
HELX_P HELX_P7 7 HIS A 195 ? THR A 198 ? HIS A 195 THR A 198 5 ? 4
HELX_P HELX_P8 8 ASN A 199 ? HIS A 211 ? ASN A 199 HIS A 211 1 ? 13
HELX_P HELX_P9 9 PHE A 212 ? ALA A 233 ? PHE A 212 ALA A 233 1 ? 22
HELX_P HELX_P10 10 SER A 240 ? THR A 277 ? SER A 240 THR A 277 1 ? 38
HELX_P HELX_P11 11 PRO A 285 ? LYS A 296 ? PRO A 285 LYS A 296 1 ? 12
HELX_P HELX_P12 12 THR A 297 ? ALA A 299 ? THR A 297 ALA A 299 5 ? 3
HELX_P HELX_P13 13 VAL A 300 ? ASN A 310 ? VAL A 300 ASN A 310 1 ? 11
HELX_P HELX_P14 14 ASN A 310 ? CYS A 323 ? ASN A 310 CYS A 323 1 ? 14
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
disulf1 disulf ? ? A CYS 110 SG ? ? ? 1_555 A CYS 187 SG ? ? A CYS 110 A CYS 187 1_555 ? ? ? ? ? ? ? 2.039 ? ?
covale1 covale both ? E ACE . C ? ? ? 1_555 A MET 1 N ? ? A ACE 0 A MET 1 1_555 ? ? ? ? ? ? ? 1.332 ? ?
covale2 covale one ? A ASN 2 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 2 C NAG 1 1_555 ? ? ? ? ? ? ? 1.439 ?
N-Glycosylation
covale3 covale one ? A ASN 15 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 15 B NAG 1 1_555 ? ? ? ? ? ? ? 1.442 ?
N-Glycosylation
covale4 covale one ? A LYS 296 NZ ? ? ? 1_555 F RET . C15 ? ? A LYS 296 A RET 1332 1_555 ? ? ? ? ? ? ? 1.321 ? ?
covale5 covale one ? A CYS 322 SG ? ? ? 1_555 G PLM . C1 ? ? A CYS 322 A PLM 1333 1_555 ? ? ? ? ? ? ? 1.755 ? ?
covale6 covale one ? A CYS 323 SG ? ? ? 1_555 H PLM . C1 ? ? A CYS 323 A PLM 1334 1_555 ? ? ? ? ? ? ? 1.752 ? ?
covale7 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.447 ? ?
covale8 covale both ? B NAG . O4 ? ? ? 1_555 B BMA . C1 ? ? B NAG 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.450 ? ?
covale9 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.448 ? ?
covale10 covale both ? C NAG . O4 ? ? ? 1_555 C BMA . C1 ? ? C NAG 2 C BMA 3 1_555 ? ? ? ? ? ? ? 1.447 ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
disulf ? ?
covale ? ?
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
A ? 2 ?
B ? 2 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
A 1 2 ? anti-parallel
B 1 2 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
A 1 THR A 4 ? GLY A 6 ? THR A 4 GLY A 6
A 2 PHE A 9 ? VAL A 11 ? PHE A 9 VAL A 11
B 1 TYR A 178 ? PRO A 180 ? TYR A 178 PRO A 180
B 2 CYS A 187 ? ILE A 189 ? CYS A 187 ILE A 189
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
A 1 2 N THR A 4 ? N THR A 4 O VAL A 11 ? O VAL A 11
B 1 2 N ILE A 179 ? N ILE A 179 O GLY A 188 ? O GLY A 188
#
_atom_sites.entry_id 3C9L
_atom_sites.fract_transf_matrix[1][1] 0.009632
_atom_sites.fract_transf_matrix[1][2] 0.005561
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.011122
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.013057
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
S
ZN
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 MET 1 1 1 MET MET A . n
A 1 2 ASN 2 2 2 ASN ASN A . n
A 1 3 GLY 3 3 3 GLY GLY A . n
A 1 4 THR 4 4 4 THR THR A . n
A 1 5 GLU 5 5 5 GLU GLU A . n
A 1 6 GLY 6 6 6 GLY GLY A . n
A 1 7 PRO 7 7 7 PRO PRO A . n
A 1 8 ASN 8 8 8 ASN ASN A . n
A 1 9 PHE 9 9 9 PHE PHE A . n
A 1 10 TYR 10 10 10 TYR TYR A . n
A 1 11 VAL 11 11 11 VAL VAL A . n
A 1 12 PRO 12 12 12 PRO PRO A . n
A 1 13 PHE 13 13 13 PHE PHE A . n
A 1 14 SER 14 14 14 SER SER A . n
A 1 15 ASN 15 15 15 ASN ASN A . n
A 1 16 LYS 16 16 16 LYS LYS A . n
A 1 17 THR 17 17 17 THR THR A . n
A 1 18 GLY 18 18 18 GLY GLY A . n
A 1 19 VAL 19 19 19 VAL VAL A . n
A 1 20 VAL 20 20 20 VAL VAL A . n
A 1 21 ARG 21 21 21 ARG ARG A . n
A 1 22 SER 22 22 22 SER SER A . n
A 1 23 PRO 23 23 23 PRO PRO A . n
A 1 24 PHE 24 24 24 PHE PHE A . n
A 1 25 GLU 25 25 25 GLU GLU A . n
A 1 26 ALA 26 26 26 ALA ALA A . n
A 1 27 PRO 27 27 27 PRO PRO A . n
A 1 28 GLN 28 28 28 GLN GLN A . n
A 1 29 TYR 29 29 29 TYR TYR A . n
A 1 30 TYR 30 30 30 TYR TYR A . n
A 1 31 LEU 31 31 31 LEU LEU A . n
A 1 32 ALA 32 32 32 ALA ALA A . n
A 1 33 GLU 33 33 33 GLU GLU A . n
A 1 34 PRO 34 34 34 PRO PRO A . n
A 1 35 TRP 35 35 35 TRP TRP A . n
A 1 36 GLN 36 36 36 GLN GLN A . n
A 1 37 PHE 37 37 37 PHE PHE A . n
A 1 38 SER 38 38 38 SER SER A . n
A 1 39 MET 39 39 39 MET MET A . n
A 1 40 LEU 40 40 40 LEU LEU A . n
A 1 41 ALA 41 41 41 ALA ALA A . n
A 1 42 ALA 42 42 42 ALA ALA A . n
A 1 43 TYR 43 43 43 TYR TYR A . n
A 1 44 MET 44 44 44 MET MET A . n
A 1 45 PHE 45 45 45 PHE PHE A . n
A 1 46 LEU 46 46 46 LEU LEU A . n
A 1 47 LEU 47 47 47 LEU LEU A . n
A 1 48 ILE 48 48 48 ILE ILE A . n
A 1 49 MET 49 49 49 MET MET A . n
A 1 50 LEU 50 50 50 LEU LEU A . n
A 1 51 GLY 51 51 51 GLY GLY A . n
A 1 52 PHE 52 52 52 PHE PHE A . n
A 1 53 PRO 53 53 53 PRO PRO A . n
A 1 54 ILE 54 54 54 ILE ILE A . n
A 1 55 ASN 55 55 55 ASN ASN A . n
A 1 56 PHE 56 56 56 PHE PHE A . n
A 1 57 LEU 57 57 57 LEU LEU A . n
A 1 58 THR 58 58 58 THR THR A . n
A 1 59 LEU 59 59 59 LEU LEU A . n
A 1 60 TYR 60 60 60 TYR TYR A . n
A 1 61 VAL 61 61 61 VAL VAL A . n
A 1 62 THR 62 62 62 THR THR A . n
A 1 63 VAL 63 63 63 VAL VAL A . n
A 1 64 GLN 64 64 64 GLN GLN A . n
A 1 65 HIS 65 65 65 HIS HIS A . n
A 1 66 LYS 66 66 66 LYS LYS A . n
A 1 67 LYS 67 67 67 LYS LYS A . n
A 1 68 LEU 68 68 68 LEU LEU A . n
A 1 69 ARG 69 69 69 ARG ARG A . n
A 1 70 THR 70 70 70 THR THR A . n
A 1 71 PRO 71 71 71 PRO PRO A . n
A 1 72 LEU 72 72 72 LEU LEU A . n
A 1 73 ASN 73 73 73 ASN ASN A . n
A 1 74 TYR 74 74 74 TYR TYR A . n
A 1 75 ILE 75 75 75 ILE ILE A . n
A 1 76 LEU 76 76 76 LEU LEU A . n
A 1 77 LEU 77 77 77 LEU LEU A . n
A 1 78 ASN 78 78 78 ASN ASN A . n
A 1 79 LEU 79 79 79 LEU LEU A . n
A 1 80 ALA 80 80 80 ALA ALA A . n
A 1 81 VAL 81 81 81 VAL VAL A . n
A 1 82 ALA 82 82 82 ALA ALA A . n
A 1 83 ASP 83 83 83 ASP ASP A . n
A 1 84 LEU 84 84 84 LEU LEU A . n
A 1 85 PHE 85 85 85 PHE PHE A . n
A 1 86 MET 86 86 86 MET MET A . n
A 1 87 VAL 87 87 87 VAL VAL A . n
A 1 88 PHE 88 88 88 PHE PHE A . n
A 1 89 GLY 89 89 89 GLY GLY A . n
A 1 90 GLY 90 90 90 GLY GLY A . n
A 1 91 PHE 91 91 91 PHE PHE A . n
A 1 92 THR 92 92 92 THR THR A . n
A 1 93 THR 93 93 93 THR THR A . n
A 1 94 THR 94 94 94 THR THR A . n
A 1 95 LEU 95 95 95 LEU LEU A . n
A 1 96 TYR 96 96 96 TYR TYR A . n
A 1 97 THR 97 97 97 THR THR A . n
A 1 98 SER 98 98 98 SER SER A . n
A 1 99 LEU 99 99 99 LEU LEU A . n
A 1 100 HIS 100 100 100 HIS HIS A . n
A 1 101 GLY 101 101 101 GLY GLY A . n
A 1 102 TYR 102 102 102 TYR TYR A . n
A 1 103 PHE 103 103 103 PHE PHE A . n
A 1 104 VAL 104 104 104 VAL VAL A . n
A 1 105 PHE 105 105 105 PHE PHE A . n
A 1 106 GLY 106 106 106 GLY GLY A . n
A 1 107 PRO 107 107 107 PRO PRO A . n
A 1 108 THR 108 108 108 THR THR A . n
A 1 109 GLY 109 109 109 GLY GLY A . n
A 1 110 CYS 110 110 110 CYS CYS A . n
A 1 111 ASN 111 111 111 ASN ASN A . n
A 1 112 LEU 112 112 112 LEU LEU A . n
A 1 113 GLU 113 113 113 GLU GLU A . n
A 1 114 GLY 114 114 114 GLY GLY A . n
A 1 115 PHE 115 115 115 PHE PHE A . n
A 1 116 PHE 116 116 116 PHE PHE A . n
A 1 117 ALA 117 117 117 ALA ALA A . n
A 1 118 THR 118 118 118 THR THR A . n
A 1 119 LEU 119 119 119 LEU LEU A . n
A 1 120 GLY 120 120 120 GLY GLY A . n
A 1 121 GLY 121 121 121 GLY GLY A . n
A 1 122 GLU 122 122 122 GLU GLU A . n
A 1 123 ILE 123 123 123 ILE ILE A . n
A 1 124 ALA 124 124 124 ALA ALA A . n
A 1 125 LEU 125 125 125 LEU LEU A . n
A 1 126 TRP 126 126 126 TRP TRP A . n
A 1 127 SER 127 127 127 SER SER A . n
A 1 128 LEU 128 128 128 LEU LEU A . n
A 1 129 VAL 129 129 129 VAL VAL A . n
A 1 130 VAL 130 130 130 VAL VAL A . n
A 1 131 LEU 131 131 131 LEU LEU A . n
A 1 132 ALA 132 132 132 ALA ALA A . n
A 1 133 ILE 133 133 133 ILE ILE A . n
A 1 134 GLU 134 134 134 GLU GLU A . n
A 1 135 ARG 135 135 135 ARG ARG A . n
A 1 136 TYR 136 136 136 TYR TYR A . n
A 1 137 VAL 137 137 137 VAL VAL A . n
A 1 138 VAL 138 138 138 VAL VAL A . n
A 1 139 VAL 139 139 139 VAL VAL A . n
A 1 140 CYS 140 140 140 CYS CYS A . n
A 1 141 LYS 141 141 141 LYS LYS A . n
A 1 142 PRO 142 142 142 PRO PRO A . n
A 1 143 MET 143 143 143 MET MET A . n
A 1 144 SER 144 144 144 SER SER A . n
A 1 145 ASN 145 145 145 ASN ASN A . n
A 1 146 PHE 146 146 146 PHE PHE A . n
A 1 147 ARG 147 147 147 ARG ARG A . n
A 1 148 PHE 148 148 148 PHE PHE A . n
A 1 149 GLY 149 149 149 GLY GLY A . n
A 1 150 GLU 150 150 150 GLU GLU A . n
A 1 151 ASN 151 151 151 ASN ASN A . n
A 1 152 HIS 152 152 152 HIS HIS A . n
A 1 153 ALA 153 153 153 ALA ALA A . n
A 1 154 ILE 154 154 154 ILE ILE A . n
A 1 155 MET 155 155 155 MET MET A . n
A 1 156 GLY 156 156 156 GLY GLY A . n
A 1 157 VAL 157 157 157 VAL VAL A . n
A 1 158 ALA 158 158 158 ALA ALA A . n
A 1 159 PHE 159 159 159 PHE PHE A . n
A 1 160 THR 160 160 160 THR THR A . n
A 1 161 TRP 161 161 161 TRP TRP A . n
A 1 162 VAL 162 162 162 VAL VAL A . n
A 1 163 MET 163 163 163 MET MET A . n
A 1 164 ALA 164 164 164 ALA ALA A . n
A 1 165 LEU 165 165 165 LEU LEU A . n
A 1 166 ALA 166 166 166 ALA ALA A . n
A 1 167 CYS 167 167 167 CYS CYS A . n
A 1 168 ALA 168 168 168 ALA ALA A . n
A 1 169 ALA 169 169 169 ALA ALA A . n
A 1 170 PRO 170 170 170 PRO PRO A . n
A 1 171 PRO 171 171 171 PRO PRO A . n
A 1 172 LEU 172 172 172 LEU LEU A . n
A 1 173 VAL 173 173 173 VAL VAL A . n
A 1 174 GLY 174 174 174 GLY GLY A . n
A 1 175 TRP 175 175 175 TRP TRP A . n
A 1 176 SER 176 176 176 SER SER A . n
A 1 177 ARG 177 177 177 ARG ARG A . n
A 1 178 TYR 178 178 178 TYR TYR A . n
A 1 179 ILE 179 179 179 ILE ILE A . n
A 1 180 PRO 180 180 180 PRO PRO A . n
A 1 181 GLU 181 181 181 GLU GLU A . n
A 1 182 GLY 182 182 182 GLY GLY A . n
A 1 183 MET 183 183 183 MET MET A . n
A 1 184 GLN 184 184 184 GLN GLN A . n
A 1 185 CYS 185 185 185 CYS CYS A . n
A 1 186 SER 186 186 186 SER SER A . n
A 1 187 CYS 187 187 187 CYS CYS A . n
A 1 188 GLY 188 188 188 GLY GLY A . n
A 1 189 ILE 189 189 189 ILE ILE A . n
A 1 190 ASP 190 190 190 ASP ASP A . n
A 1 191 TYR 191 191 191 TYR TYR A . n
A 1 192 TYR 192 192 192 TYR TYR A . n
A 1 193 THR 193 193 193 THR THR A . n
A 1 194 PRO 194 194 194 PRO PRO A . n
A 1 195 HIS 195 195 195 HIS HIS A . n
A 1 196 GLU 196 196 196 GLU GLU A . n
A 1 197 GLU 197 197 197 GLU GLU A . n
A 1 198 THR 198 198 198 THR THR A . n
A 1 199 ASN 199 199 199 ASN ASN A . n
A 1 200 ASN 200 200 200 ASN ASN A . n
A 1 201 GLU 201 201 201 GLU GLU A . n
A 1 202 SER 202 202 202 SER SER A . n
A 1 203 PHE 203 203 203 PHE PHE A . n
A 1 204 VAL 204 204 204 VAL VAL A . n
A 1 205 ILE 205 205 205 ILE ILE A . n
A 1 206 TYR 206 206 206 TYR TYR A . n
A 1 207 MET 207 207 207 MET MET A . n
A 1 208 PHE 208 208 208 PHE PHE A . n
A 1 209 VAL 209 209 209 VAL VAL A . n
A 1 210 VAL 210 210 210 VAL VAL A . n
A 1 211 HIS 211 211 211 HIS HIS A . n
A 1 212 PHE 212 212 212 PHE PHE A . n
A 1 213 ILE 213 213 213 ILE ILE A . n
A 1 214 ILE 214 214 214 ILE ILE A . n
A 1 215 PRO 215 215 215 PRO PRO A . n
A 1 216 LEU 216 216 216 LEU LEU A . n
A 1 217 ILE 217 217 217 ILE ILE A . n
A 1 218 VAL 218 218 218 VAL VAL A . n
A 1 219 ILE 219 219 219 ILE ILE A . n
A 1 220 PHE 220 220 220 PHE PHE A . n
A 1 221 PHE 221 221 221 PHE PHE A . n
A 1 222 CYS 222 222 222 CYS CYS A . n
A 1 223 TYR 223 223 223 TYR TYR A . n
A 1 224 GLY 224 224 224 GLY GLY A . n
A 1 225 GLN 225 225 225 GLN GLN A . n
A 1 226 LEU 226 226 226 LEU LEU A . n
A 1 227 VAL 227 227 227 VAL VAL A . n
A 1 228 PHE 228 228 228 PHE PHE A . n
A 1 229 THR 229 229 229 THR THR A . n
A 1 230 VAL 230 230 230 VAL VAL A . n
A 1 231 LYS 231 231 231 LYS LYS A . n
A 1 232 GLU 232 232 232 GLU GLU A . n
A 1 233 ALA 233 233 233 ALA ALA A . n
A 1 234 ALA 234 234 234 ALA ALA A . n
A 1 235 ALA 235 235 235 ALA ALA A . n
A 1 236 GLN 236 236 236 GLN GLN A . n
A 1 237 GLN 237 237 237 GLN GLN A . n
A 1 238 GLN 238 238 238 GLN GLN A . n
A 1 239 GLU 239 239 239 GLU GLU A . n
A 1 240 SER 240 240 240 SER SER A . n
A 1 241 ALA 241 241 241 ALA ALA A . n
A 1 242 THR 242 242 242 THR THR A . n
A 1 243 THR 243 243 243 THR THR A . n
A 1 244 GLN 244 244 244 GLN GLN A . n
A 1 245 LYS 245 245 245 LYS LYS A . n
A 1 246 ALA 246 246 246 ALA ALA A . n
A 1 247 GLU 247 247 247 GLU GLU A . n
A 1 248 LYS 248 248 248 LYS LYS A . n
A 1 249 GLU 249 249 249 GLU GLU A . n
A 1 250 VAL 250 250 250 VAL VAL A . n
A 1 251 THR 251 251 251 THR THR A . n
A 1 252 ARG 252 252 252 ARG ARG A . n
A 1 253 MET 253 253 253 MET MET A . n
A 1 254 VAL 254 254 254 VAL VAL A . n
A 1 255 ILE 255 255 255 ILE ILE A . n
A 1 256 ILE 256 256 256 ILE ILE A . n
A 1 257 MET 257 257 257 MET MET A . n
A 1 258 VAL 258 258 258 VAL VAL A . n
A 1 259 ILE 259 259 259 ILE ILE A . n
A 1 260 ALA 260 260 260 ALA ALA A . n
A 1 261 PHE 261 261 261 PHE PHE A . n
A 1 262 LEU 262 262 262 LEU LEU A . n
A 1 263 ILE 263 263 263 ILE ILE A . n
A 1 264 CYS 264 264 264 CYS CYS A . n
A 1 265 TRP 265 265 265 TRP TRP A . n
A 1 266 LEU 266 266 266 LEU LEU A . n
A 1 267 PRO 267 267 267 PRO PRO A . n
A 1 268 TYR 268 268 268 TYR TYR A . n
A 1 269 ALA 269 269 269 ALA ALA A . n
A 1 270 GLY 270 270 270 GLY GLY A . n
A 1 271 VAL 271 271 271 VAL VAL A . n
A 1 272 ALA 272 272 272 ALA ALA A . n
A 1 273 PHE 273 273 273 PHE PHE A . n
A 1 274 TYR 274 274 274 TYR TYR A . n
A 1 275 ILE 275 275 275 ILE ILE A . n
A 1 276 PHE 276 276 276 PHE PHE A . n
A 1 277 THR 277 277 277 THR THR A . n
A 1 278 HIS 278 278 278 HIS HIS A . n
A 1 279 GLN 279 279 279 GLN GLN A . n
A 1 280 GLY 280 280 280 GLY GLY A . n
A 1 281 SER 281 281 281 SER SER A . n
A 1 282 ASP 282 282 282 ASP ASP A . n
A 1 283 PHE 283 283 283 PHE PHE A . n
A 1 284 GLY 284 284 284 GLY GLY A . n
A 1 285 PRO 285 285 285 PRO PRO A . n
A 1 286 ILE 286 286 286 ILE ILE A . n
A 1 287 PHE 287 287 287 PHE PHE A . n
A 1 288 MET 288 288 288 MET MET A . n
A 1 289 THR 289 289 289 THR THR A . n
A 1 290 ILE 290 290 290 ILE ILE A . n
A 1 291 PRO 291 291 291 PRO PRO A . n
A 1 292 ALA 292 292 292 ALA ALA A . n
A 1 293 PHE 293 293 293 PHE PHE A . n
A 1 294 PHE 294 294 294 PHE PHE A . n
A 1 295 ALA 295 295 295 ALA ALA A . n
A 1 296 LYS 296 296 296 LYS LYS A . n
A 1 297 THR 297 297 297 THR THR A . n
A 1 298 SER 298 298 298 SER SER A . n
A 1 299 ALA 299 299 299 ALA ALA A . n
A 1 300 VAL 300 300 300 VAL VAL A . n
A 1 301 TYR 301 301 301 TYR TYR A . n
A 1 302 ASN 302 302 302 ASN ASN A . n
A 1 303 PRO 303 303 303 PRO PRO A . n
A 1 304 VAL 304 304 304 VAL VAL A . n
A 1 305 ILE 305 305 305 ILE ILE A . n
A 1 306 TYR 306 306 306 TYR TYR A . n
A 1 307 ILE 307 307 307 ILE ILE A . n
A 1 308 MET 308 308 308 MET MET A . n
A 1 309 MET 309 309 309 MET MET A . n
A 1 310 ASN 310 310 310 ASN ASN A . n
A 1 311 LYS 311 311 311 LYS LYS A . n
A 1 312 GLN 312 312 312 GLN GLN A . n
A 1 313 PHE 313 313 313 PHE PHE A . n
A 1 314 ARG 314 314 314 ARG ARG A . n
A 1 315 ASN 315 315 315 ASN ASN A . n
A 1 316 CYS 316 316 316 CYS CYS A . n
A 1 317 MET 317 317 317 MET MET A . n
A 1 318 VAL 318 318 318 VAL VAL A . n
A 1 319 THR 319 319 319 THR THR A . n
A 1 320 THR 320 320 320 THR THR A . n
A 1 321 LEU 321 321 321 LEU LEU A . n
A 1 322 CYS 322 322 322 CYS CYS A . n
A 1 323 CYS 323 323 323 CYS CYS A . n
A 1 324 GLY 324 324 324 GLY GLY A . n
A 1 325 LYS 325 325 325 LYS LYS A . n
A 1 326 ASN 326 326 326 ASN ASN A . n
A 1 327 PRO 327 327 ? ? ? A . n
A 1 328 LEU 328 328 ? ? ? A . n
A 1 329 GLY 329 329 ? ? ? A . n
A 1 330 ASP 330 330 330 ASP ASP A . n
A 1 331 ASP 331 331 331 ASP ASP A . n
A 1 332 GLU 332 332 332 GLU GLU A . n
A 1 333 ALA 333 333 ? ? ? A . n
A 1 334 SER 334 334 ? ? ? A . n
A 1 335 THR 335 335 ? ? ? A . n
A 1 336 THR 336 336 ? ? ? A . n
A 1 337 VAL 337 337 ? ? ? A . n
A 1 338 SER 338 338 ? ? ? A . n
A 1 339 LYS 339 339 ? ? ? A . n
A 1 340 THR 340 340 ? ? ? A . n
A 1 341 GLU 341 341 ? ? ? A . n
A 1 342 THR 342 342 ? ? ? A . n
A 1 343 SER 343 343 ? ? ? A . n
A 1 344 GLN 344 344 ? ? ? A . n
A 1 345 VAL 345 345 ? ? ? A . n
A 1 346 ALA 346 346 ? ? ? A . n
A 1 347 PRO 347 347 ? ? ? A . n
A 1 348 ALA 348 348 ? ? ? A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 ZN 1 1349 1349 ZN ZN A .
E 4 ACE 1 0 0 ACE ACE A .
F 5 RET 1 1332 1332 RET RET A .
G 6 PLM 1 1333 1333 PLM PLM A .
H 6 PLM 1 1334 1334 PLM PLM A .
I 7 PEF 1 1341 1341 PEF PEF A .
J 8 LDA 1 1342 1342 LDA LDA A .
K 9 C8E 1 1343 1343 C8E C8E A .
L 9 C8E 1 1344 1344 C8E C8E A .
M 9 C8E 1 1345 1345 C8E C8E A .
N 9 C8E 1 1346 1346 C8E C8E A .
O 9 C8E 1 1347 1347 C8E C8E A .
P 9 C8E 1 1348 1348 C8E C8E A .
Q 10 HOH 1 1350 14 HOH HOH A .
Q 10 HOH 2 1351 15 HOH HOH A .
Q 10 HOH 3 1352 1 HOH HOH A .
Q 10 HOH 4 1353 2 HOH HOH A .
Q 10 HOH 5 1354 3 HOH HOH A .
Q 10 HOH 6 1355 4 HOH HOH A .
Q 10 HOH 7 1356 5 HOH HOH A .
Q 10 HOH 8 1357 6 HOH HOH A .
Q 10 HOH 9 1358 7 HOH HOH A .
Q 10 HOH 10 1359 8 HOH HOH A .
Q 10 HOH 11 1360 9 HOH HOH A .
Q 10 HOH 12 1361 10 HOH HOH A .
Q 10 HOH 13 1362 11 HOH HOH A .
Q 10 HOH 14 1363 14 HOH HOH A .
Q 10 HOH 15 1364 15 HOH HOH A .
Q 10 HOH 16 1365 16 HOH HOH A .
Q 10 HOH 17 1366 17 HOH HOH A .
Q 10 HOH 18 1367 18 HOH HOH A .
Q 10 HOH 19 1368 19 HOH HOH A .
Q 10 HOH 20 1369 20 HOH HOH A .
#
loop_
_pdbx_struct_mod_residue.id
_pdbx_struct_mod_residue.label_asym_id
_pdbx_struct_mod_residue.label_comp_id
_pdbx_struct_mod_residue.label_seq_id
_pdbx_struct_mod_residue.auth_asym_id
_pdbx_struct_mod_residue.auth_comp_id
_pdbx_struct_mod_residue.auth_seq_id
_pdbx_struct_mod_residue.PDB_ins_code
_pdbx_struct_mod_residue.parent_comp_id
_pdbx_struct_mod_residue.details
1 A ASN 2 A ASN 2 ? ASN 'GLYCOSYLATION SITE'
2 A ASN 15 A ASN 15 ? ASN 'GLYCOSYLATION SITE'
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2008-08-05
2 'Structure model' 1 1 2011-07-13
3 'Structure model' 1 2 2011-08-10
4 'Structure model' 1 3 2011-10-05
5 'Structure model' 1 4 2019-07-24
6 'Structure model' 2 0 2020-07-29
7 'Structure model' 2 1 2023-08-30
#
loop_
_pdbx_audit_revision_details.ordinal
_pdbx_audit_revision_details.revision_ordinal
_pdbx_audit_revision_details.data_content_type
_pdbx_audit_revision_details.provider
_pdbx_audit_revision_details.type
_pdbx_audit_revision_details.description
_pdbx_audit_revision_details.details
1 1 'Structure model' repository 'Initial release' ? ?
2 6 'Structure model' repository Remediation 'Carbohydrate remediation' ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Non-polymer description'
2 2 'Structure model' 'Version format compliance'
3 3 'Structure model' Other
4 4 'Structure model' Other
5 5 'Structure model' 'Data collection'
6 5 'Structure model' 'Derived calculations'
7 5 'Structure model' 'Refinement description'
8 6 'Structure model' Advisory
9 6 'Structure model' 'Atomic model'
10 6 'Structure model' 'Data collection'
11 6 'Structure model' 'Derived calculations'
12 6 'Structure model' 'Structure summary'
13 7 'Structure model' 'Data collection'
14 7 'Structure model' 'Database references'
15 7 'Structure model' 'Refinement description'
16 7 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 5 'Structure model' software
2 5 'Structure model' struct_conn
3 6 'Structure model' atom_site
4 6 'Structure model' chem_comp
5 6 'Structure model' entity
6 6 'Structure model' pdbx_branch_scheme
7 6 'Structure model' pdbx_chem_comp_identifier
8 6 'Structure model' pdbx_entity_branch
9 6 'Structure model' pdbx_entity_branch_descriptor
10 6 'Structure model' pdbx_entity_branch_link
11 6 'Structure model' pdbx_entity_branch_list
12 6 'Structure model' pdbx_entity_nonpoly
13 6 'Structure model' pdbx_nonpoly_scheme
14 6 'Structure model' pdbx_struct_assembly_gen
15 6 'Structure model' pdbx_unobs_or_zero_occ_atoms
16 6 'Structure model' struct_asym
17 6 'Structure model' struct_conn
18 6 'Structure model' struct_site
19 6 'Structure model' struct_site_gen
20 7 'Structure model' chem_comp
21 7 'Structure model' chem_comp_atom
22 7 'Structure model' chem_comp_bond
23 7 'Structure model' database_2
24 7 'Structure model' pdbx_initial_refinement_model
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 5 'Structure model' '_software.contact_author'
2 5 'Structure model' '_software.contact_author_email'
3 5 'Structure model' '_software.language'
4 5 'Structure model' '_software.location'
5 5 'Structure model' '_software.name'
6 5 'Structure model' '_software.type'
7 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
8 6 'Structure model' '_atom_site.auth_asym_id'
9 6 'Structure model' '_atom_site.auth_seq_id'
10 6 'Structure model' '_atom_site.label_asym_id'
11 6 'Structure model' '_atom_site.label_entity_id'
12 6 'Structure model' '_chem_comp.name'
13 6 'Structure model' '_chem_comp.type'
14 6 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list'
15 6 'Structure model' '_pdbx_unobs_or_zero_occ_atoms.label_asym_id'
16 6 'Structure model' '_struct_conn.pdbx_dist_value'
17 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
18 6 'Structure model' '_struct_conn.pdbx_role'
19 6 'Structure model' '_struct_conn.ptnr1_auth_asym_id'
20 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id'
21 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
22 6 'Structure model' '_struct_conn.ptnr1_label_asym_id'
23 6 'Structure model' '_struct_conn.ptnr1_label_atom_id'
24 6 'Structure model' '_struct_conn.ptnr1_label_comp_id'
25 6 'Structure model' '_struct_conn.ptnr1_label_seq_id'
26 6 'Structure model' '_struct_conn.ptnr2_auth_asym_id'
27 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
28 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
29 6 'Structure model' '_struct_conn.ptnr2_label_asym_id'
30 6 'Structure model' '_struct_conn.ptnr2_label_atom_id'
31 6 'Structure model' '_struct_conn.ptnr2_label_comp_id'
32 6 'Structure model' '_struct_conn.ptnr2_label_seq_id'
33 7 'Structure model' '_chem_comp.pdbx_synonyms'
34 7 'Structure model' '_database_2.pdbx_DOI'
35 7 'Structure model' '_database_2.pdbx_database_accession'
#
loop_
_software.name
_software.version
_software.date
_software.type
_software.contact_author
_software.contact_author_email
_software.classification
_software.location
_software.language
_software.citation_id
_software.pdbx_ordinal
PHENIX . ? ? ? ? refinement ? ? ? 1
PDB_EXTRACT 3.004 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction'
http://pdb.rutgers.edu/software/ C++ ? 2
REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement
http://www.ccp4.ac.uk/main.html Fortran_77 ? 3
#
_pdbx_database_remark.id 0
_pdbx_database_remark.text
;This entry 3C9L reflects an alternative modeling of the structural data in R1GZMSF, original data determined by author: J.LI,P.EDWARDS,M.BURGHAMMER,C.VILLA,G.F.X.SCHERTLER
;
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 PRO A 23 ? ? -66.23 1.78
2 1 LYS A 141 ? ? 32.26 58.81
3 1 SER A 144 ? ? -56.75 -157.64
4 1 ASN A 145 ? ? -65.70 78.80
5 1 SER A 176 ? ? 64.19 -168.35
6 1 HIS A 195 ? ? 22.90 69.95
7 1 PHE A 212 ? ? -148.47 -67.92
8 1 LYS A 231 ? ? -99.22 -67.20
9 1 GLU A 239 ? ? -53.67 105.07
10 1 HIS A 278 ? ? -149.98 37.38
11 1 CYS A 323 ? ? 64.80 105.81
12 1 ASP A 331 ? ? 177.08 -54.56
#
loop_
_pdbx_unobs_or_zero_occ_atoms.id
_pdbx_unobs_or_zero_occ_atoms.PDB_model_num
_pdbx_unobs_or_zero_occ_atoms.polymer_flag
_pdbx_unobs_or_zero_occ_atoms.occupancy_flag
_pdbx_unobs_or_zero_occ_atoms.auth_asym_id
_pdbx_unobs_or_zero_occ_atoms.auth_comp_id
_pdbx_unobs_or_zero_occ_atoms.auth_seq_id
_pdbx_unobs_or_zero_occ_atoms.PDB_ins_code
_pdbx_unobs_or_zero_occ_atoms.auth_atom_id
_pdbx_unobs_or_zero_occ_atoms.label_alt_id
_pdbx_unobs_or_zero_occ_atoms.label_asym_id
_pdbx_unobs_or_zero_occ_atoms.label_comp_id
_pdbx_unobs_or_zero_occ_atoms.label_seq_id
_pdbx_unobs_or_zero_occ_atoms.label_atom_id
1 1 Y 1 A ASP 330 ? CG ? A ASP 330 CG
2 1 Y 1 A ASP 330 ? OD1 ? A ASP 330 OD1
3 1 Y 1 A ASP 330 ? OD2 ? A ASP 330 OD2
4 1 Y 1 A ASP 331 ? CG ? A ASP 331 CG
5 1 Y 1 A ASP 331 ? OD1 ? A ASP 331 OD1
6 1 Y 1 A ASP 331 ? OD2 ? A ASP 331 OD2
7 1 Y 1 A GLU 332 ? CA ? A GLU 332 CA
8 1 Y 1 A GLU 332 ? C ? A GLU 332 C
9 1 Y 1 A GLU 332 ? O ? A GLU 332 O
10 1 Y 1 A GLU 332 ? CB ? A GLU 332 CB
11 1 Y 1 A GLU 332 ? CG ? A GLU 332 CG
12 1 Y 1 A GLU 332 ? CD ? A GLU 332 CD
13 1 Y 1 A GLU 332 ? OE1 ? A GLU 332 OE1
14 1 Y 1 A GLU 332 ? OE2 ? A GLU 332 OE2
15 1 N 1 A PEF 1341 ? C2 ? I PEF 1 C2
16 1 N 1 A PEF 1341 ? C1 ? I PEF 1 C1
17 1 N 1 A PEF 1341 ? N ? I PEF 1 N
18 1 N 1 A PEF 1341 ? C3 ? I PEF 1 C3
19 1 N 1 A PEF 1341 ? C4 ? I PEF 1 C4
20 1 N 1 A PEF 1341 ? C5 ? I PEF 1 C5
21 1 N 1 A PEF 1341 ? C19 ? I PEF 1 C19
22 1 N 1 A PEF 1341 ? C20 ? I PEF 1 C20
23 1 N 1 A PEF 1341 ? C21 ? I PEF 1 C21
24 1 N 1 A PEF 1341 ? C22 ? I PEF 1 C22
25 1 N 1 A PEF 1341 ? C23 ? I PEF 1 C23
26 1 N 1 A PEF 1341 ? C24 ? I PEF 1 C24
27 1 N 1 A PEF 1341 ? C25 ? I PEF 1 C25
28 1 N 1 A PEF 1341 ? C41 ? I PEF 1 C41
29 1 N 1 A PEF 1341 ? C42 ? I PEF 1 C42
30 1 N 1 A PEF 1341 ? C43 ? I PEF 1 C43
31 1 N 1 A PEF 1341 ? C44 ? I PEF 1 C44
32 1 N 1 A PEF 1341 ? C45 ? I PEF 1 C45
33 1 N 1 A PEF 1341 ? O4 ? I PEF 1 O4
34 1 N 1 A PEF 1341 ? O5 ? I PEF 1 O5
35 1 N 1 A PEF 1341 ? O2 ? I PEF 1 O2
36 1 N 1 A PEF 1341 ? O3 ? I PEF 1 O3
37 1 N 1 A PEF 1341 ? O1P ? I PEF 1 O1P
38 1 N 1 A PEF 1341 ? O2P ? I PEF 1 O2P
39 1 N 1 A PEF 1341 ? O3P ? I PEF 1 O3P
40 1 N 1 A PEF 1341 ? O4P ? I PEF 1 O4P
41 1 N 1 A PEF 1341 ? P ? I PEF 1 P
42 1 N 1 A C8E 1343 ? O18 ? K C8E 1 O18
43 1 N 1 A C8E 1343 ? C19 ? K C8E 1 C19
44 1 N 1 A C8E 1343 ? C20 ? K C8E 1 C20
45 1 N 1 A C8E 1343 ? O21 ? K C8E 1 O21
46 1 N 1 A C8E 1344 ? C16 ? L C8E 1 C16
47 1 N 1 A C8E 1344 ? C17 ? L C8E 1 C17
48 1 N 1 A C8E 1344 ? O18 ? L C8E 1 O18
49 1 N 1 A C8E 1344 ? C19 ? L C8E 1 C19
50 1 N 1 A C8E 1344 ? C20 ? L C8E 1 C20
51 1 N 1 A C8E 1344 ? O21 ? L C8E 1 O21
52 1 N 1 A C8E 1345 ? C11 ? M C8E 1 C11
53 1 N 1 A C8E 1345 ? O12 ? M C8E 1 O12
54 1 N 1 A C8E 1345 ? C13 ? M C8E 1 C13
55 1 N 1 A C8E 1345 ? C14 ? M C8E 1 C14
56 1 N 1 A C8E 1345 ? O15 ? M C8E 1 O15
57 1 N 1 A C8E 1345 ? C16 ? M C8E 1 C16
58 1 N 1 A C8E 1345 ? C17 ? M C8E 1 C17
59 1 N 1 A C8E 1345 ? O18 ? M C8E 1 O18
60 1 N 1 A C8E 1345 ? C19 ? M C8E 1 C19
61 1 N 1 A C8E 1345 ? C20 ? M C8E 1 C20
62 1 N 1 A C8E 1345 ? O21 ? M C8E 1 O21
63 1 N 1 A C8E 1346 ? C19 ? N C8E 1 C19
64 1 N 1 A C8E 1346 ? C20 ? N C8E 1 C20
65 1 N 1 A C8E 1346 ? O21 ? N C8E 1 O21
66 1 N 1 A C8E 1348 ? C13 ? P C8E 1 C13
67 1 N 1 A C8E 1348 ? C14 ? P C8E 1 C14
68 1 N 1 A C8E 1348 ? O15 ? P C8E 1 O15
69 1 N 1 A C8E 1348 ? C16 ? P C8E 1 C16
70 1 N 1 A C8E 1348 ? C17 ? P C8E 1 C17
71 1 N 1 A C8E 1348 ? O18 ? P C8E 1 O18
72 1 N 1 A C8E 1348 ? C19 ? P C8E 1 C19
73 1 N 1 A C8E 1348 ? C20 ? P C8E 1 C20
74 1 N 1 A C8E 1348 ? O21 ? P C8E 1 O21
#
loop_
_pdbx_unobs_or_zero_occ_residues.id
_pdbx_unobs_or_zero_occ_residues.PDB_model_num
_pdbx_unobs_or_zero_occ_residues.polymer_flag
_pdbx_unobs_or_zero_occ_residues.occupancy_flag
_pdbx_unobs_or_zero_occ_residues.auth_asym_id
_pdbx_unobs_or_zero_occ_residues.auth_comp_id
_pdbx_unobs_or_zero_occ_residues.auth_seq_id
_pdbx_unobs_or_zero_occ_residues.PDB_ins_code
_pdbx_unobs_or_zero_occ_residues.label_asym_id
_pdbx_unobs_or_zero_occ_residues.label_comp_id
_pdbx_unobs_or_zero_occ_residues.label_seq_id
1 1 Y 1 A PRO 327 ? A PRO 327
2 1 Y 1 A LEU 328 ? A LEU 328
3 1 Y 1 A GLY 329 ? A GLY 329
4 1 Y 1 A ALA 333 ? A ALA 333
5 1 Y 1 A SER 334 ? A SER 334
6 1 Y 1 A THR 335 ? A THR 335
7 1 Y 1 A THR 336 ? A THR 336
8 1 Y 1 A VAL 337 ? A VAL 337
9 1 Y 1 A SER 338 ? A SER 338
10 1 Y 1 A LYS 339 ? A LYS 339
11 1 Y 1 A THR 340 ? A THR 340
12 1 Y 1 A GLU 341 ? A GLU 341
13 1 Y 1 A THR 342 ? A THR 342
14 1 Y 1 A SER 343 ? A SER 343
15 1 Y 1 A GLN 344 ? A GLN 344
16 1 Y 1 A VAL 345 ? A VAL 345
17 1 Y 1 A ALA 346 ? A ALA 346
18 1 Y 1 A PRO 347 ? A PRO 347
19 1 Y 1 A ALA 348 ? A ALA 348
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ACE C C N N 1
ACE O O N N 2
ACE CH3 C N N 3
ACE H H N N 4
ACE H1 H N N 5
ACE H2 H N N 6
ACE H3 H N N 7
ALA N N N N 8
ALA CA C N S 9
ALA C C N N 10
ALA O O N N 11
ALA CB C N N 12
ALA OXT O N N 13
ALA H H N N 14
ALA H2 H N N 15
ALA HA H N N 16
ALA HB1 H N N 17
ALA HB2 H N N 18
ALA HB3 H N N 19
ALA HXT H N N 20
ARG N N N N 21
ARG CA C N S 22
ARG C C N N 23
ARG O O N N 24
ARG CB C N N 25
ARG CG C N N 26
ARG CD C N N 27
ARG NE N N N 28
ARG CZ C N N 29
ARG NH1 N N N 30
ARG NH2 N N N 31
ARG OXT O N N 32
ARG H H N N 33
ARG H2 H N N 34
ARG HA H N N 35
ARG HB2 H N N 36
ARG HB3 H N N 37
ARG HG2 H N N 38
ARG HG3 H N N 39
ARG HD2 H N N 40
ARG HD3 H N N 41
ARG HE H N N 42
ARG HH11 H N N 43
ARG HH12 H N N 44
ARG HH21 H N N 45
ARG HH22 H N N 46
ARG HXT H N N 47
ASN N N N N 48
ASN CA C N S 49
ASN C C N N 50
ASN O O N N 51
ASN CB C N N 52
ASN CG C N N 53
ASN OD1 O N N 54
ASN ND2 N N N 55
ASN OXT O N N 56
ASN H H N N 57
ASN H2 H N N 58
ASN HA H N N 59
ASN HB2 H N N 60
ASN HB3 H N N 61
ASN HD21 H N N 62
ASN HD22 H N N 63
ASN HXT H N N 64
ASP N N N N 65
ASP CA C N S 66
ASP C C N N 67
ASP O O N N 68
ASP CB C N N 69
ASP CG C N N 70
ASP OD1 O N N 71
ASP OD2 O N N 72
ASP OXT O N N 73
ASP H H N N 74
ASP H2 H N N 75
ASP HA H N N 76
ASP HB2 H N N 77
ASP HB3 H N N 78
ASP HD2 H N N 79
ASP HXT H N N 80
BMA C1 C N R 81
BMA C2 C N S 82
BMA C3 C N S 83
BMA C4 C N S 84
BMA C5 C N R 85
BMA C6 C N N 86
BMA O1 O N N 87
BMA O2 O N N 88
BMA O3 O N N 89
BMA O4 O N N 90
BMA O5 O N N 91
BMA O6 O N N 92
BMA H1 H N N 93
BMA H2 H N N 94
BMA H3 H N N 95
BMA H4 H N N 96
BMA H5 H N N 97
BMA H61 H N N 98
BMA H62 H N N 99
BMA HO1 H N N 100
BMA HO2 H N N 101
BMA HO3 H N N 102
BMA HO4 H N N 103
BMA HO6 H N N 104
C8E C1 C N N 105
C8E C2 C N N 106
C8E C3 C N N 107
C8E C4 C N N 108
C8E C5 C N N 109
C8E C6 C N N 110
C8E C7 C N N 111
C8E C8 C N N 112
C8E O9 O N N 113
C8E C10 C N N 114
C8E C11 C N N 115
C8E O12 O N N 116
C8E C13 C N N 117
C8E C14 C N N 118
C8E O15 O N N 119
C8E C16 C N N 120
C8E C17 C N N 121
C8E O18 O N N 122
C8E C19 C N N 123
C8E C20 C N N 124
C8E O21 O N N 125
C8E H11 H N N 126
C8E H12 H N N 127
C8E H13 H N N 128
C8E H21 H N N 129
C8E H22 H N N 130
C8E H31 H N N 131
C8E H32 H N N 132
C8E H41 H N N 133
C8E H42 H N N 134
C8E H51 H N N 135
C8E H52 H N N 136
C8E H61 H N N 137
C8E H62 H N N 138
C8E H71 H N N 139
C8E H72 H N N 140
C8E H81 H N N 141
C8E H82 H N N 142
C8E H101 H N N 143
C8E H102 H N N 144
C8E H111 H N N 145
C8E H112 H N N 146
C8E H131 H N N 147
C8E H132 H N N 148
C8E H141 H N N 149
C8E H142 H N N 150
C8E H161 H N N 151
C8E H162 H N N 152
C8E H171 H N N 153
C8E H172 H N N 154
C8E H191 H N N 155
C8E H192 H N N 156
C8E H201 H N N 157
C8E H202 H N N 158
C8E HO2 H N N 159
CYS N N N N 160
CYS CA C N R 161
CYS C C N N 162
CYS O O N N 163
CYS CB C N N 164
CYS SG S N N 165
CYS OXT O N N 166
CYS H H N N 167
CYS H2 H N N 168
CYS HA H N N 169
CYS HB2 H N N 170
CYS HB3 H N N 171
CYS HG H N N 172
CYS HXT H N N 173
GLN N N N N 174
GLN CA C N S 175
GLN C C N N 176
GLN O O N N 177
GLN CB C N N 178
GLN CG C N N 179
GLN CD C N N 180
GLN OE1 O N N 181
GLN NE2 N N N 182
GLN OXT O N N 183
GLN H H N N 184
GLN H2 H N N 185
GLN HA H N N 186
GLN HB2 H N N 187
GLN HB3 H N N 188
GLN HG2 H N N 189
GLN HG3 H N N 190
GLN HE21 H N N 191
GLN HE22 H N N 192
GLN HXT H N N 193
GLU N N N N 194
GLU CA C N S 195
GLU C C N N 196
GLU O O N N 197
GLU CB C N N 198
GLU CG C N N 199
GLU CD C N N 200
GLU OE1 O N N 201
GLU OE2 O N N 202
GLU OXT O N N 203
GLU H H N N 204
GLU H2 H N N 205
GLU HA H N N 206
GLU HB2 H N N 207
GLU HB3 H N N 208
GLU HG2 H N N 209
GLU HG3 H N N 210
GLU HE2 H N N 211
GLU HXT H N N 212
GLY N N N N 213
GLY CA C N N 214
GLY C C N N 215
GLY O O N N 216
GLY OXT O N N 217
GLY H H N N 218
GLY H2 H N N 219
GLY HA2 H N N 220
GLY HA3 H N N 221
GLY HXT H N N 222
HIS N N N N 223
HIS CA C N S 224
HIS C C N N 225
HIS O O N N 226
HIS CB C N N 227
HIS CG C Y N 228
HIS ND1 N Y N 229
HIS CD2 C Y N 230
HIS CE1 C Y N 231
HIS NE2 N Y N 232
HIS OXT O N N 233
HIS H H N N 234
HIS H2 H N N 235
HIS HA H N N 236
HIS HB2 H N N 237
HIS HB3 H N N 238
HIS HD1 H N N 239
HIS HD2 H N N 240
HIS HE1 H N N 241
HIS HE2 H N N 242
HIS HXT H N N 243
HOH O O N N 244
HOH H1 H N N 245
HOH H2 H N N 246
ILE N N N N 247
ILE CA C N S 248
ILE C C N N 249
ILE O O N N 250
ILE CB C N S 251
ILE CG1 C N N 252
ILE CG2 C N N 253
ILE CD1 C N N 254
ILE OXT O N N 255
ILE H H N N 256
ILE H2 H N N 257
ILE HA H N N 258
ILE HB H N N 259
ILE HG12 H N N 260
ILE HG13 H N N 261
ILE HG21 H N N 262
ILE HG22 H N N 263
ILE HG23 H N N 264
ILE HD11 H N N 265
ILE HD12 H N N 266
ILE HD13 H N N 267
ILE HXT H N N 268
LDA N1 N N N 269
LDA O1 O N N 270
LDA CM1 C N N 271
LDA CM2 C N N 272
LDA C1 C N N 273
LDA C2 C N N 274
LDA C3 C N N 275
LDA C4 C N N 276
LDA C5 C N N 277
LDA C6 C N N 278
LDA C7 C N N 279
LDA C8 C N N 280
LDA C9 C N N 281
LDA C10 C N N 282
LDA C11 C N N 283
LDA C12 C N N 284
LDA HM11 H N N 285
LDA HM12 H N N 286
LDA HM13 H N N 287
LDA HM21 H N N 288
LDA HM22 H N N 289
LDA HM23 H N N 290
LDA H11 H N N 291
LDA H12 H N N 292
LDA H21 H N N 293
LDA H22 H N N 294
LDA H31 H N N 295
LDA H32 H N N 296
LDA H41 H N N 297
LDA H42 H N N 298
LDA H51 H N N 299
LDA H52 H N N 300
LDA H61 H N N 301
LDA H62 H N N 302
LDA H71 H N N 303
LDA H72 H N N 304
LDA H81 H N N 305
LDA H82 H N N 306
LDA H91 H N N 307
LDA H92 H N N 308
LDA H101 H N N 309
LDA H102 H N N 310
LDA H111 H N N 311
LDA H112 H N N 312
LDA H121 H N N 313
LDA H122 H N N 314
LDA H123 H N N 315
LEU N N N N 316
LEU CA C N S 317
LEU C C N N 318
LEU O O N N 319
LEU CB C N N 320
LEU CG C N N 321
LEU CD1 C N N 322
LEU CD2 C N N 323
LEU OXT O N N 324
LEU H H N N 325
LEU H2 H N N 326
LEU HA H N N 327
LEU HB2 H N N 328
LEU HB3 H N N 329
LEU HG H N N 330
LEU HD11 H N N 331
LEU HD12 H N N 332
LEU HD13 H N N 333
LEU HD21 H N N 334
LEU HD22 H N N 335
LEU HD23 H N N 336
LEU HXT H N N 337
LYS N N N N 338
LYS CA C N S 339
LYS C C N N 340
LYS O O N N 341
LYS CB C N N 342
LYS CG C N N 343
LYS CD C N N 344
LYS CE C N N 345
LYS NZ N N N 346
LYS OXT O N N 347
LYS H H N N 348
LYS H2 H N N 349
LYS HA H N N 350
LYS HB2 H N N 351
LYS HB3 H N N 352
LYS HG2 H N N 353
LYS HG3 H N N 354
LYS HD2 H N N 355
LYS HD3 H N N 356
LYS HE2 H N N 357
LYS HE3 H N N 358
LYS HZ1 H N N 359
LYS HZ2 H N N 360
LYS HZ3 H N N 361
LYS HXT H N N 362
MET N N N N 363
MET CA C N S 364
MET C C N N 365
MET O O N N 366
MET CB C N N 367
MET CG C N N 368
MET SD S N N 369
MET CE C N N 370
MET OXT O N N 371
MET H H N N 372
MET H2 H N N 373
MET HA H N N 374
MET HB2 H N N 375
MET HB3 H N N 376
MET HG2 H N N 377
MET HG3 H N N 378
MET HE1 H N N 379
MET HE2 H N N 380
MET HE3 H N N 381
MET HXT H N N 382
NAG C1 C N R 383
NAG C2 C N R 384
NAG C3 C N R 385
NAG C4 C N S 386
NAG C5 C N R 387
NAG C6 C N N 388
NAG C7 C N N 389
NAG C8 C N N 390
NAG N2 N N N 391
NAG O1 O N N 392
NAG O3 O N N 393
NAG O4 O N N 394
NAG O5 O N N 395
NAG O6 O N N 396
NAG O7 O N N 397
NAG H1 H N N 398
NAG H2 H N N 399
NAG H3 H N N 400
NAG H4 H N N 401
NAG H5 H N N 402
NAG H61 H N N 403
NAG H62 H N N 404
NAG H81 H N N 405
NAG H82 H N N 406
NAG H83 H N N 407
NAG HN2 H N N 408
NAG HO1 H N N 409
NAG HO3 H N N 410
NAG HO4 H N N 411
NAG HO6 H N N 412
PEF C2 C N R 413
PEF C1 C N N 414
PEF N N N N 415
PEF C3 C N N 416
PEF C4 C N N 417
PEF C5 C N N 418
PEF C10 C N N 419
PEF C11 C N N 420
PEF C12 C N N 421
PEF C13 C N N 422
PEF C14 C N N 423
PEF C15 C N N 424
PEF C16 C N N 425
PEF C17 C N N 426
PEF C18 C N N 427
PEF C19 C N N 428
PEF C20 C N N 429
PEF C21 C N N 430
PEF C22 C N N 431
PEF C23 C N N 432
PEF C24 C N N 433
PEF C25 C N N 434
PEF C30 C N N 435
PEF C31 C N N 436
PEF C32 C N N 437
PEF C33 C N N 438
PEF C34 C N N 439
PEF C35 C N N 440
PEF C36 C N N 441
PEF C37 C N N 442
PEF C38 C N N 443
PEF C39 C N N 444
PEF C40 C N N 445
PEF C41 C N N 446
PEF C42 C N N 447
PEF C43 C N N 448
PEF C44 C N N 449
PEF C45 C N N 450
PEF O4 O N N 451
PEF O5 O N N 452
PEF O2 O N N 453
PEF O3 O N N 454
PEF O1P O N N 455
PEF O2P O N N 456
PEF O3P O N N 457
PEF O4P O N N 458
PEF P P N S 459
PEF H21 H N N 460
PEF H11 H N N 461
PEF H12 H N N 462
PEF HN1 H N N 463
PEF HN2 H N N 464
PEF H31 H N N 465
PEF H32 H N N 466
PEF H41 H N N 467
PEF H42 H N N 468
PEF H51 H N N 469
PEF H52 H N N 470
PEF H112 H N N 471
PEF H111 H N N 472
PEF H122 H N N 473
PEF H121 H N N 474
PEF H132 H N N 475
PEF H131 H N N 476
PEF H142 H N N 477
PEF H141 H N N 478
PEF H152 H N N 479
PEF H151 H N N 480
PEF H162 H N N 481
PEF H161 H N N 482
PEF H172 H N N 483
PEF H171 H N N 484
PEF H182 H N N 485
PEF H181 H N N 486
PEF H192 H N N 487
PEF H191 H N N 488
PEF H202 H N N 489
PEF H201 H N N 490
PEF H212 H N N 491
PEF H211 H N N 492
PEF H222 H N N 493
PEF H221 H N N 494
PEF H232 H N N 495
PEF H231 H N N 496
PEF H242 H N N 497
PEF H241 H N N 498
PEF H252 H N N 499
PEF H251 H N N 500
PEF H253 H N N 501
PEF H312 H N N 502
PEF H311 H N N 503
PEF H322 H N N 504
PEF H321 H N N 505
PEF H332 H N N 506
PEF H331 H N N 507
PEF H342 H N N 508
PEF H341 H N N 509
PEF H352 H N N 510
PEF H351 H N N 511
PEF H362 H N N 512
PEF H361 H N N 513
PEF H372 H N N 514
PEF H371 H N N 515
PEF H382 H N N 516
PEF H381 H N N 517
PEF H392 H N N 518
PEF H391 H N N 519
PEF H402 H N N 520
PEF H401 H N N 521
PEF H412 H N N 522
PEF H411 H N N 523
PEF H422 H N N 524
PEF H421 H N N 525
PEF H432 H N N 526
PEF H431 H N N 527
PEF H442 H N N 528
PEF H441 H N N 529
PEF H452 H N N 530
PEF H451 H N N 531
PEF H453 H N N 532
PEF HOP2 H N N 533
PHE N N N N 534
PHE CA C N S 535
PHE C C N N 536
PHE O O N N 537
PHE CB C N N 538
PHE CG C Y N 539
PHE CD1 C Y N 540
PHE CD2 C Y N 541
PHE CE1 C Y N 542
PHE CE2 C Y N 543
PHE CZ C Y N 544
PHE OXT O N N 545
PHE H H N N 546
PHE H2 H N N 547
PHE HA H N N 548
PHE HB2 H N N 549
PHE HB3 H N N 550
PHE HD1 H N N 551
PHE HD2 H N N 552
PHE HE1 H N N 553
PHE HE2 H N N 554
PHE HZ H N N 555
PHE HXT H N N 556
PLM C1 C N N 557
PLM O1 O N N 558
PLM O2 O N N 559
PLM C2 C N N 560
PLM C3 C N N 561
PLM C4 C N N 562
PLM C5 C N N 563
PLM C6 C N N 564
PLM C7 C N N 565
PLM C8 C N N 566
PLM C9 C N N 567
PLM CA C N N 568
PLM CB C N N 569
PLM CC C N N 570
PLM CD C N N 571
PLM CE C N N 572
PLM CF C N N 573
PLM CG C N N 574
PLM H H N N 575
PLM H21 H N N 576
PLM H22 H N N 577
PLM H31 H N N 578
PLM H32 H N N 579
PLM H41 H N N 580
PLM H42 H N N 581
PLM H51 H N N 582
PLM H52 H N N 583
PLM H61 H N N 584
PLM H62 H N N 585
PLM H71 H N N 586
PLM H72 H N N 587
PLM H81 H N N 588
PLM H82 H N N 589
PLM H91 H N N 590
PLM H92 H N N 591
PLM HA1 H N N 592
PLM HA2 H N N 593
PLM HB1 H N N 594
PLM HB2 H N N 595
PLM HC1 H N N 596
PLM HC2 H N N 597
PLM HD1 H N N 598
PLM HD2 H N N 599
PLM HE1 H N N 600
PLM HE2 H N N 601
PLM HF1 H N N 602
PLM HF2 H N N 603
PLM HG1 H N N 604
PLM HG2 H N N 605
PLM HG3 H N N 606
PRO N N N N 607
PRO CA C N S 608
PRO C C N N 609
PRO O O N N 610
PRO CB C N N 611
PRO CG C N N 612
PRO CD C N N 613
PRO OXT O N N 614
PRO H H N N 615
PRO HA H N N 616
PRO HB2 H N N 617
PRO HB3 H N N 618
PRO HG2 H N N 619
PRO HG3 H N N 620
PRO HD2 H N N 621
PRO HD3 H N N 622
PRO HXT H N N 623
RET C1 C N N 624
RET C2 C N N 625
RET C3 C N N 626
RET C4 C N N 627
RET C5 C N N 628
RET C6 C N N 629
RET C7 C N N 630
RET C8 C N N 631
RET C9 C N N 632
RET C10 C N N 633
RET C11 C N N 634
RET C12 C N N 635
RET C13 C N N 636
RET C14 C N N 637
RET C15 C N N 638
RET O1 O N N 639
RET C16 C N N 640
RET C17 C N N 641
RET C18 C N N 642
RET C19 C N N 643
RET C20 C N N 644
RET H21 H N N 645
RET H22 H N N 646
RET H31 H N N 647
RET H32 H N N 648
RET H41 H N N 649
RET H42 H N N 650
RET H7 H N N 651
RET H8 H N N 652
RET H10 H N N 653
RET H11 H N N 654
RET H12 H N N 655
RET H14 H N N 656
RET H15 H N N 657
RET H161 H N N 658
RET H162 H N N 659
RET H163 H N N 660
RET H171 H N N 661
RET H172 H N N 662
RET H173 H N N 663
RET H181 H N N 664
RET H182 H N N 665
RET H183 H N N 666
RET H191 H N N 667
RET H192 H N N 668
RET H193 H N N 669
RET H201 H N N 670
RET H202 H N N 671
RET H203 H N N 672
SER N N N N 673
SER CA C N S 674
SER C C N N 675
SER O O N N 676
SER CB C N N 677
SER OG O N N 678
SER OXT O N N 679
SER H H N N 680
SER H2 H N N 681
SER HA H N N 682
SER HB2 H N N 683
SER HB3 H N N 684
SER HG H N N 685
SER HXT H N N 686
THR N N N N 687
THR CA C N S 688
THR C C N N 689
THR O O N N 690
THR CB C N R 691
THR OG1 O N N 692
THR CG2 C N N 693
THR OXT O N N 694
THR H H N N 695
THR H2 H N N 696
THR HA H N N 697
THR HB H N N 698
THR HG1 H N N 699
THR HG21 H N N 700
THR HG22 H N N 701
THR HG23 H N N 702
THR HXT H N N 703
TRP N N N N 704
TRP CA C N S 705
TRP C C N N 706
TRP O O N N 707
TRP CB C N N 708
TRP CG C Y N 709
TRP CD1 C Y N 710
TRP CD2 C Y N 711
TRP NE1 N Y N 712
TRP CE2 C Y N 713
TRP CE3 C Y N 714
TRP CZ2 C Y N 715
TRP CZ3 C Y N 716
TRP CH2 C Y N 717
TRP OXT O N N 718
TRP H H N N 719
TRP H2 H N N 720
TRP HA H N N 721
TRP HB2 H N N 722
TRP HB3 H N N 723
TRP HD1 H N N 724
TRP HE1 H N N 725
TRP HE3 H N N 726
TRP HZ2 H N N 727
TRP HZ3 H N N 728
TRP HH2 H N N 729
TRP HXT H N N 730
TYR N N N N 731
TYR CA C N S 732
TYR C C N N 733
TYR O O N N 734
TYR CB C N N 735
TYR CG C Y N 736
TYR CD1 C Y N 737
TYR CD2 C Y N 738
TYR CE1 C Y N 739
TYR CE2 C Y N 740
TYR CZ C Y N 741
TYR OH O N N 742
TYR OXT O N N 743
TYR H H N N 744
TYR H2 H N N 745
TYR HA H N N 746
TYR HB2 H N N 747
TYR HB3 H N N 748
TYR HD1 H N N 749
TYR HD2 H N N 750
TYR HE1 H N N 751
TYR HE2 H N N 752
TYR HH H N N 753
TYR HXT H N N 754
VAL N N N N 755
VAL CA C N S 756
VAL C C N N 757
VAL O O N N 758
VAL CB C N N 759
VAL CG1 C N N 760
VAL CG2 C N N 761
VAL OXT O N N 762
VAL H H N N 763
VAL H2 H N N 764
VAL HA H N N 765
VAL HB H N N 766
VAL HG11 H N N 767
VAL HG12 H N N 768
VAL HG13 H N N 769
VAL HG21 H N N 770
VAL HG22 H N N 771
VAL HG23 H N N 772
VAL HXT H N N 773
ZN ZN ZN N N 774
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ACE C O doub N N 1
ACE C CH3 sing N N 2
ACE C H sing N N 3
ACE CH3 H1 sing N N 4
ACE CH3 H2 sing N N 5
ACE CH3 H3 sing N N 6
ALA N CA sing N N 7
ALA N H sing N N 8
ALA N H2 sing N N 9
ALA CA C sing N N 10
ALA CA CB sing N N 11
ALA CA HA sing N N 12
ALA C O doub N N 13
ALA C OXT sing N N 14
ALA CB HB1 sing N N 15
ALA CB HB2 sing N N 16
ALA CB HB3 sing N N 17
ALA OXT HXT sing N N 18
ARG N CA sing N N 19
ARG N H sing N N 20
ARG N H2 sing N N 21
ARG CA C sing N N 22
ARG CA CB sing N N 23
ARG CA HA sing N N 24
ARG C O doub N N 25
ARG C OXT sing N N 26
ARG CB CG sing N N 27
ARG CB HB2 sing N N 28
ARG CB HB3 sing N N 29
ARG CG CD sing N N 30
ARG CG HG2 sing N N 31
ARG CG HG3 sing N N 32
ARG CD NE sing N N 33
ARG CD HD2 sing N N 34
ARG CD HD3 sing N N 35
ARG NE CZ sing N N 36
ARG NE HE sing N N 37
ARG CZ NH1 sing N N 38
ARG CZ NH2 doub N N 39
ARG NH1 HH11 sing N N 40
ARG NH1 HH12 sing N N 41
ARG NH2 HH21 sing N N 42
ARG NH2 HH22 sing N N 43
ARG OXT HXT sing N N 44
ASN N CA sing N N 45
ASN N H sing N N 46
ASN N H2 sing N N 47
ASN CA C sing N N 48
ASN CA CB sing N N 49
ASN CA HA sing N N 50
ASN C O doub N N 51
ASN C OXT sing N N 52
ASN CB CG sing N N 53
ASN CB HB2 sing N N 54
ASN CB HB3 sing N N 55
ASN CG OD1 doub N N 56
ASN CG ND2 sing N N 57
ASN ND2 HD21 sing N N 58
ASN ND2 HD22 sing N N 59
ASN OXT HXT sing N N 60
ASP N CA sing N N 61
ASP N H sing N N 62
ASP N H2 sing N N 63
ASP CA C sing N N 64
ASP CA CB sing N N 65
ASP CA HA sing N N 66
ASP C O doub N N 67
ASP C OXT sing N N 68
ASP CB CG sing N N 69
ASP CB HB2 sing N N 70
ASP CB HB3 sing N N 71
ASP CG OD1 doub N N 72
ASP CG OD2 sing N N 73
ASP OD2 HD2 sing N N 74
ASP OXT HXT sing N N 75
BMA C1 C2 sing N N 76
BMA C1 O1 sing N N 77
BMA C1 O5 sing N N 78
BMA C1 H1 sing N N 79
BMA C2 C3 sing N N 80
BMA C2 O2 sing N N 81
BMA C2 H2 sing N N 82
BMA C3 C4 sing N N 83
BMA C3 O3 sing N N 84
BMA C3 H3 sing N N 85
BMA C4 C5 sing N N 86
BMA C4 O4 sing N N 87
BMA C4 H4 sing N N 88
BMA C5 C6 sing N N 89
BMA C5 O5 sing N N 90
BMA C5 H5 sing N N 91
BMA C6 O6 sing N N 92
BMA C6 H61 sing N N 93
BMA C6 H62 sing N N 94
BMA O1 HO1 sing N N 95
BMA O2 HO2 sing N N 96
BMA O3 HO3 sing N N 97
BMA O4 HO4 sing N N 98
BMA O6 HO6 sing N N 99
C8E C1 C2 sing N N 100
C8E C1 H11 sing N N 101
C8E C1 H12 sing N N 102
C8E C1 H13 sing N N 103
C8E C2 C3 sing N N 104
C8E C2 H21 sing N N 105
C8E C2 H22 sing N N 106
C8E C3 C4 sing N N 107
C8E C3 H31 sing N N 108
C8E C3 H32 sing N N 109
C8E C4 C5 sing N N 110
C8E C4 H41 sing N N 111
C8E C4 H42 sing N N 112
C8E C5 C6 sing N N 113
C8E C5 H51 sing N N 114
C8E C5 H52 sing N N 115
C8E C6 C7 sing N N 116
C8E C6 H61 sing N N 117
C8E C6 H62 sing N N 118
C8E C7 C8 sing N N 119
C8E C7 H71 sing N N 120
C8E C7 H72 sing N N 121
C8E C8 O9 sing N N 122
C8E C8 H81 sing N N 123
C8E C8 H82 sing N N 124
C8E O9 C10 sing N N 125
C8E C10 C11 sing N N 126
C8E C10 H101 sing N N 127
C8E C10 H102 sing N N 128
C8E C11 O12 sing N N 129
C8E C11 H111 sing N N 130
C8E C11 H112 sing N N 131
C8E O12 C13 sing N N 132
C8E C13 C14 sing N N 133
C8E C13 H131 sing N N 134
C8E C13 H132 sing N N 135
C8E C14 O15 sing N N 136
C8E C14 H141 sing N N 137
C8E C14 H142 sing N N 138
C8E O15 C16 sing N N 139
C8E C16 C17 sing N N 140
C8E C16 H161 sing N N 141
C8E C16 H162 sing N N 142
C8E C17 O18 sing N N 143
C8E C17 H171 sing N N 144
C8E C17 H172 sing N N 145
C8E O18 C19 sing N N 146
C8E C19 C20 sing N N 147
C8E C19 H191 sing N N 148
C8E C19 H192 sing N N 149
C8E C20 O21 sing N N 150
C8E C20 H201 sing N N 151
C8E C20 H202 sing N N 152
C8E O21 HO2 sing N N 153
CYS N CA sing N N 154
CYS N H sing N N 155
CYS N H2 sing N N 156
CYS CA C sing N N 157
CYS CA CB sing N N 158
CYS CA HA sing N N 159
CYS C O doub N N 160
CYS C OXT sing N N 161
CYS CB SG sing N N 162
CYS CB HB2 sing N N 163
CYS CB HB3 sing N N 164
CYS SG HG sing N N 165
CYS OXT HXT sing N N 166
GLN N CA sing N N 167
GLN N H sing N N 168
GLN N H2 sing N N 169
GLN CA C sing N N 170
GLN CA CB sing N N 171
GLN CA HA sing N N 172
GLN C O doub N N 173
GLN C OXT sing N N 174
GLN CB CG sing N N 175
GLN CB HB2 sing N N 176
GLN CB HB3 sing N N 177
GLN CG CD sing N N 178
GLN CG HG2 sing N N 179
GLN CG HG3 sing N N 180
GLN CD OE1 doub N N 181
GLN CD NE2 sing N N 182
GLN NE2 HE21 sing N N 183
GLN NE2 HE22 sing N N 184
GLN OXT HXT sing N N 185
GLU N CA sing N N 186
GLU N H sing N N 187
GLU N H2 sing N N 188
GLU CA C sing N N 189
GLU CA CB sing N N 190
GLU CA HA sing N N 191
GLU C O doub N N 192
GLU C OXT sing N N 193
GLU CB CG sing N N 194
GLU CB HB2 sing N N 195
GLU CB HB3 sing N N 196
GLU CG CD sing N N 197
GLU CG HG2 sing N N 198
GLU CG HG3 sing N N 199
GLU CD OE1 doub N N 200
GLU CD OE2 sing N N 201
GLU OE2 HE2 sing N N 202
GLU OXT HXT sing N N 203
GLY N CA sing N N 204
GLY N H sing N N 205
GLY N H2 sing N N 206
GLY CA C sing N N 207
GLY CA HA2 sing N N 208
GLY CA HA3 sing N N 209
GLY C O doub N N 210
GLY C OXT sing N N 211
GLY OXT HXT sing N N 212
HIS N CA sing N N 213
HIS N H sing N N 214
HIS N H2 sing N N 215
HIS CA C sing N N 216
HIS CA CB sing N N 217
HIS CA HA sing N N 218
HIS C O doub N N 219
HIS C OXT sing N N 220
HIS CB CG sing N N 221
HIS CB HB2 sing N N 222
HIS CB HB3 sing N N 223
HIS CG ND1 sing Y N 224
HIS CG CD2 doub Y N 225
HIS ND1 CE1 doub Y N 226
HIS ND1 HD1 sing N N 227
HIS CD2 NE2 sing Y N 228
HIS CD2 HD2 sing N N 229
HIS CE1 NE2 sing Y N 230
HIS CE1 HE1 sing N N 231
HIS NE2 HE2 sing N N 232
HIS OXT HXT sing N N 233
HOH O H1 sing N N 234
HOH O H2 sing N N 235
ILE N CA sing N N 236
ILE N H sing N N 237
ILE N H2 sing N N 238
ILE CA C sing N N 239
ILE CA CB sing N N 240
ILE CA HA sing N N 241
ILE C O doub N N 242
ILE C OXT sing N N 243
ILE CB CG1 sing N N 244
ILE CB CG2 sing N N 245
ILE CB HB sing N N 246
ILE CG1 CD1 sing N N 247
ILE CG1 HG12 sing N N 248
ILE CG1 HG13 sing N N 249
ILE CG2 HG21 sing N N 250
ILE CG2 HG22 sing N N 251
ILE CG2 HG23 sing N N 252
ILE CD1 HD11 sing N N 253
ILE CD1 HD12 sing N N 254
ILE CD1 HD13 sing N N 255
ILE OXT HXT sing N N 256
LDA N1 O1 sing N N 257
LDA N1 CM1 sing N N 258
LDA N1 CM2 sing N N 259
LDA N1 C1 sing N N 260
LDA CM1 HM11 sing N N 261
LDA CM1 HM12 sing N N 262
LDA CM1 HM13 sing N N 263
LDA CM2 HM21 sing N N 264
LDA CM2 HM22 sing N N 265
LDA CM2 HM23 sing N N 266
LDA C1 C2 sing N N 267
LDA C1 H11 sing N N 268
LDA C1 H12 sing N N 269
LDA C2 C3 sing N N 270
LDA C2 H21 sing N N 271
LDA C2 H22 sing N N 272
LDA C3 C4 sing N N 273
LDA C3 H31 sing N N 274
LDA C3 H32 sing N N 275
LDA C4 C5 sing N N 276
LDA C4 H41 sing N N 277
LDA C4 H42 sing N N 278
LDA C5 C6 sing N N 279
LDA C5 H51 sing N N 280
LDA C5 H52 sing N N 281
LDA C6 C7 sing N N 282
LDA C6 H61 sing N N 283
LDA C6 H62 sing N N 284
LDA C7 C8 sing N N 285
LDA C7 H71 sing N N 286
LDA C7 H72 sing N N 287
LDA C8 C9 sing N N 288
LDA C8 H81 sing N N 289
LDA C8 H82 sing N N 290
LDA C9 C10 sing N N 291
LDA C9 H91 sing N N 292
LDA C9 H92 sing N N 293
LDA C10 C11 sing N N 294
LDA C10 H101 sing N N 295
LDA C10 H102 sing N N 296
LDA C11 C12 sing N N 297
LDA C11 H111 sing N N 298
LDA C11 H112 sing N N 299
LDA C12 H121 sing N N 300
LDA C12 H122 sing N N 301
LDA C12 H123 sing N N 302
LEU N CA sing N N 303
LEU N H sing N N 304
LEU N H2 sing N N 305
LEU CA C sing N N 306
LEU CA CB sing N N 307
LEU CA HA sing N N 308
LEU C O doub N N 309
LEU C OXT sing N N 310
LEU CB CG sing N N 311
LEU CB HB2 sing N N 312
LEU CB HB3 sing N N 313
LEU CG CD1 sing N N 314
LEU CG CD2 sing N N 315
LEU CG HG sing N N 316
LEU CD1 HD11 sing N N 317
LEU CD1 HD12 sing N N 318
LEU CD1 HD13 sing N N 319
LEU CD2 HD21 sing N N 320
LEU CD2 HD22 sing N N 321
LEU CD2 HD23 sing N N 322
LEU OXT HXT sing N N 323
LYS N CA sing N N 324
LYS N H sing N N 325
LYS N H2 sing N N 326
LYS CA C sing N N 327
LYS CA CB sing N N 328
LYS CA HA sing N N 329
LYS C O doub N N 330
LYS C OXT sing N N 331
LYS CB CG sing N N 332
LYS CB HB2 sing N N 333
LYS CB HB3 sing N N 334
LYS CG CD sing N N 335
LYS CG HG2 sing N N 336
LYS CG HG3 sing N N 337
LYS CD CE sing N N 338
LYS CD HD2 sing N N 339
LYS CD HD3 sing N N 340
LYS CE NZ sing N N 341
LYS CE HE2 sing N N 342
LYS CE HE3 sing N N 343
LYS NZ HZ1 sing N N 344
LYS NZ HZ2 sing N N 345
LYS NZ HZ3 sing N N 346
LYS OXT HXT sing N N 347
MET N CA sing N N 348
MET N H sing N N 349
MET N H2 sing N N 350
MET CA C sing N N 351
MET CA CB sing N N 352
MET CA HA sing N N 353
MET C O doub N N 354
MET C OXT sing N N 355
MET CB CG sing N N 356
MET CB HB2 sing N N 357
MET CB HB3 sing N N 358
MET CG SD sing N N 359
MET CG HG2 sing N N 360
MET CG HG3 sing N N 361
MET SD CE sing N N 362
MET CE HE1 sing N N 363
MET CE HE2 sing N N 364
MET CE HE3 sing N N 365
MET OXT HXT sing N N 366
NAG C1 C2 sing N N 367
NAG C1 O1 sing N N 368
NAG C1 O5 sing N N 369
NAG C1 H1 sing N N 370
NAG C2 C3 sing N N 371
NAG C2 N2 sing N N 372
NAG C2 H2 sing N N 373
NAG C3 C4 sing N N 374
NAG C3 O3 sing N N 375
NAG C3 H3 sing N N 376
NAG C4 C5 sing N N 377
NAG C4 O4 sing N N 378
NAG C4 H4 sing N N 379
NAG C5 C6 sing N N 380
NAG C5 O5 sing N N 381
NAG C5 H5 sing N N 382
NAG C6 O6 sing N N 383
NAG C6 H61 sing N N 384
NAG C6 H62 sing N N 385
NAG C7 C8 sing N N 386
NAG C7 N2 sing N N 387
NAG C7 O7 doub N N 388
NAG C8 H81 sing N N 389
NAG C8 H82 sing N N 390
NAG C8 H83 sing N N 391
NAG N2 HN2 sing N N 392
NAG O1 HO1 sing N N 393
NAG O3 HO3 sing N N 394
NAG O4 HO4 sing N N 395
NAG O6 HO6 sing N N 396
PEF C2 C1 sing N N 397
PEF C2 C3 sing N N 398
PEF C2 O2 sing N N 399
PEF C2 H21 sing N N 400
PEF C1 O3P sing N N 401
PEF C1 H11 sing N N 402
PEF C1 H12 sing N N 403
PEF N C5 sing N N 404
PEF N HN1 sing N N 405
PEF N HN2 sing N N 406
PEF C3 O3 sing N N 407
PEF C3 H31 sing N N 408
PEF C3 H32 sing N N 409
PEF C4 C5 sing N N 410
PEF C4 O4P sing N N 411
PEF C4 H41 sing N N 412
PEF C4 H42 sing N N 413
PEF C5 H51 sing N N 414
PEF C5 H52 sing N N 415
PEF C10 C11 sing N N 416
PEF C10 O4 doub N N 417
PEF C10 O2 sing N N 418
PEF C11 C12 sing N N 419
PEF C11 H112 sing N N 420
PEF C11 H111 sing N N 421
PEF C12 C13 sing N N 422
PEF C12 H122 sing N N 423
PEF C12 H121 sing N N 424
PEF C13 C14 sing N N 425
PEF C13 H132 sing N N 426
PEF C13 H131 sing N N 427
PEF C14 C15 sing N N 428
PEF C14 H142 sing N N 429
PEF C14 H141 sing N N 430
PEF C15 C16 sing N N 431
PEF C15 H152 sing N N 432
PEF C15 H151 sing N N 433
PEF C16 C17 sing N N 434
PEF C16 H162 sing N N 435
PEF C16 H161 sing N N 436
PEF C17 C18 sing N N 437
PEF C17 H172 sing N N 438
PEF C17 H171 sing N N 439
PEF C18 C19 sing N N 440
PEF C18 H182 sing N N 441
PEF C18 H181 sing N N 442
PEF C19 C20 sing N N 443
PEF C19 H192 sing N N 444
PEF C19 H191 sing N N 445
PEF C20 C21 sing N N 446
PEF C20 H202 sing N N 447
PEF C20 H201 sing N N 448
PEF C21 C22 sing N N 449
PEF C21 H212 sing N N 450
PEF C21 H211 sing N N 451
PEF C22 C23 sing N N 452
PEF C22 H222 sing N N 453
PEF C22 H221 sing N N 454
PEF C23 C24 sing N N 455
PEF C23 H232 sing N N 456
PEF C23 H231 sing N N 457
PEF C24 C25 sing N N 458
PEF C24 H242 sing N N 459
PEF C24 H241 sing N N 460
PEF C25 H252 sing N N 461
PEF C25 H251 sing N N 462
PEF C25 H253 sing N N 463
PEF C30 C31 sing N N 464
PEF C30 O5 doub N N 465
PEF C30 O3 sing N N 466
PEF C31 C32 sing N N 467
PEF C31 H312 sing N N 468
PEF C31 H311 sing N N 469
PEF C32 C33 sing N N 470
PEF C32 H322 sing N N 471
PEF C32 H321 sing N N 472
PEF C33 C34 sing N N 473
PEF C33 H332 sing N N 474
PEF C33 H331 sing N N 475
PEF C34 C35 sing N N 476
PEF C34 H342 sing N N 477
PEF C34 H341 sing N N 478
PEF C35 C36 sing N N 479
PEF C35 H352 sing N N 480
PEF C35 H351 sing N N 481
PEF C36 C37 sing N N 482
PEF C36 H362 sing N N 483
PEF C36 H361 sing N N 484
PEF C37 C38 sing N N 485
PEF C37 H372 sing N N 486
PEF C37 H371 sing N N 487
PEF C38 C39 sing N N 488
PEF C38 H382 sing N N 489
PEF C38 H381 sing N N 490
PEF C39 C40 sing N N 491
PEF C39 H392 sing N N 492
PEF C39 H391 sing N N 493
PEF C40 C41 sing N N 494
PEF C40 H402 sing N N 495
PEF C40 H401 sing N N 496
PEF C41 C42 sing N N 497
PEF C41 H412 sing N N 498
PEF C41 H411 sing N N 499
PEF C42 C43 sing N N 500
PEF C42 H422 sing N N 501
PEF C42 H421 sing N N 502
PEF C43 C44 sing N N 503
PEF C43 H432 sing N N 504
PEF C43 H431 sing N N 505
PEF C44 C45 sing N N 506
PEF C44 H442 sing N N 507
PEF C44 H441 sing N N 508
PEF C45 H452 sing N N 509
PEF C45 H451 sing N N 510
PEF C45 H453 sing N N 511
PEF O1P P doub N N 512
PEF O2P P sing N N 513
PEF O2P HOP2 sing N N 514
PEF O3P P sing N N 515
PEF O4P P sing N N 516
PHE N CA sing N N 517
PHE N H sing N N 518
PHE N H2 sing N N 519
PHE CA C sing N N 520
PHE CA CB sing N N 521
PHE CA HA sing N N 522
PHE C O doub N N 523
PHE C OXT sing N N 524
PHE CB CG sing N N 525
PHE CB HB2 sing N N 526
PHE CB HB3 sing N N 527
PHE CG CD1 doub Y N 528
PHE CG CD2 sing Y N 529
PHE CD1 CE1 sing Y N 530
PHE CD1 HD1 sing N N 531
PHE CD2 CE2 doub Y N 532
PHE CD2 HD2 sing N N 533
PHE CE1 CZ doub Y N 534
PHE CE1 HE1 sing N N 535
PHE CE2 CZ sing Y N 536
PHE CE2 HE2 sing N N 537
PHE CZ HZ sing N N 538
PHE OXT HXT sing N N 539
PLM C1 O1 sing N N 540
PLM C1 O2 doub N N 541
PLM C1 C2 sing N N 542
PLM O1 H sing N N 543
PLM C2 C3 sing N N 544
PLM C2 H21 sing N N 545
PLM C2 H22 sing N N 546
PLM C3 C4 sing N N 547
PLM C3 H31 sing N N 548
PLM C3 H32 sing N N 549
PLM C4 C5 sing N N 550
PLM C4 H41 sing N N 551
PLM C4 H42 sing N N 552
PLM C5 C6 sing N N 553
PLM C5 H51 sing N N 554
PLM C5 H52 sing N N 555
PLM C6 C7 sing N N 556
PLM C6 H61 sing N N 557
PLM C6 H62 sing N N 558
PLM C7 C8 sing N N 559
PLM C7 H71 sing N N 560
PLM C7 H72 sing N N 561
PLM C8 C9 sing N N 562
PLM C8 H81 sing N N 563
PLM C8 H82 sing N N 564
PLM C9 CA sing N N 565
PLM C9 H91 sing N N 566
PLM C9 H92 sing N N 567
PLM CA CB sing N N 568
PLM CA HA1 sing N N 569
PLM CA HA2 sing N N 570
PLM CB CC sing N N 571
PLM CB HB1 sing N N 572
PLM CB HB2 sing N N 573
PLM CC CD sing N N 574
PLM CC HC1 sing N N 575
PLM CC HC2 sing N N 576
PLM CD CE sing N N 577
PLM CD HD1 sing N N 578
PLM CD HD2 sing N N 579
PLM CE CF sing N N 580
PLM CE HE1 sing N N 581
PLM CE HE2 sing N N 582
PLM CF CG sing N N 583
PLM CF HF1 sing N N 584
PLM CF HF2 sing N N 585
PLM CG HG1 sing N N 586
PLM CG HG2 sing N N 587
PLM CG HG3 sing N N 588
PRO N CA sing N N 589
PRO N CD sing N N 590
PRO N H sing N N 591
PRO CA C sing N N 592
PRO CA CB sing N N 593
PRO CA HA sing N N 594
PRO C O doub N N 595
PRO C OXT sing N N 596
PRO CB CG sing N N 597
PRO CB HB2 sing N N 598
PRO CB HB3 sing N N 599
PRO CG CD sing N N 600
PRO CG HG2 sing N N 601
PRO CG HG3 sing N N 602
PRO CD HD2 sing N N 603
PRO CD HD3 sing N N 604
PRO OXT HXT sing N N 605
RET C1 C2 sing N N 606
RET C1 C6 sing N N 607
RET C1 C16 sing N N 608
RET C1 C17 sing N N 609
RET C2 C3 sing N N 610
RET C2 H21 sing N N 611
RET C2 H22 sing N N 612
RET C3 C4 sing N N 613
RET C3 H31 sing N N 614
RET C3 H32 sing N N 615
RET C4 C5 sing N N 616
RET C4 H41 sing N N 617
RET C4 H42 sing N N 618
RET C5 C6 doub N N 619
RET C5 C18 sing N N 620
RET C6 C7 sing N N 621
RET C7 C8 doub N E 622
RET C7 H7 sing N N 623
RET C8 C9 sing N N 624
RET C8 H8 sing N N 625
RET C9 C10 doub N E 626
RET C9 C19 sing N N 627
RET C10 C11 sing N N 628
RET C10 H10 sing N N 629
RET C11 C12 doub N E 630
RET C11 H11 sing N N 631
RET C12 C13 sing N N 632
RET C12 H12 sing N N 633
RET C13 C14 doub N E 634
RET C13 C20 sing N N 635
RET C14 C15 sing N N 636
RET C14 H14 sing N N 637
RET C15 O1 doub N N 638
RET C15 H15 sing N N 639
RET C16 H161 sing N N 640
RET C16 H162 sing N N 641
RET C16 H163 sing N N 642
RET C17 H171 sing N N 643
RET C17 H172 sing N N 644
RET C17 H173 sing N N 645
RET C18 H181 sing N N 646
RET C18 H182 sing N N 647
RET C18 H183 sing N N 648
RET C19 H191 sing N N 649
RET C19 H192 sing N N 650
RET C19 H193 sing N N 651
RET C20 H201 sing N N 652
RET C20 H202 sing N N 653
RET C20 H203 sing N N 654
SER N CA sing N N 655
SER N H sing N N 656
SER N H2 sing N N 657
SER CA C sing N N 658
SER CA CB sing N N 659
SER CA HA sing N N 660
SER C O doub N N 661
SER C OXT sing N N 662
SER CB OG sing N N 663
SER CB HB2 sing N N 664
SER CB HB3 sing N N 665
SER OG HG sing N N 666
SER OXT HXT sing N N 667
THR N CA sing N N 668
THR N H sing N N 669
THR N H2 sing N N 670
THR CA C sing N N 671
THR CA CB sing N N 672
THR CA HA sing N N 673
THR C O doub N N 674
THR C OXT sing N N 675
THR CB OG1 sing N N 676
THR CB CG2 sing N N 677
THR CB HB sing N N 678
THR OG1 HG1 sing N N 679
THR CG2 HG21 sing N N 680
THR CG2 HG22 sing N N 681
THR CG2 HG23 sing N N 682
THR OXT HXT sing N N 683
TRP N CA sing N N 684
TRP N H sing N N 685
TRP N H2 sing N N 686
TRP CA C sing N N 687
TRP CA CB sing N N 688
TRP CA HA sing N N 689
TRP C O doub N N 690
TRP C OXT sing N N 691
TRP CB CG sing N N 692
TRP CB HB2 sing N N 693
TRP CB HB3 sing N N 694
TRP CG CD1 doub Y N 695
TRP CG CD2 sing Y N 696
TRP CD1 NE1 sing Y N 697
TRP CD1 HD1 sing N N 698
TRP CD2 CE2 doub Y N 699
TRP CD2 CE3 sing Y N 700
TRP NE1 CE2 sing Y N 701
TRP NE1 HE1 sing N N 702
TRP CE2 CZ2 sing Y N 703
TRP CE3 CZ3 doub Y N 704
TRP CE3 HE3 sing N N 705
TRP CZ2 CH2 doub Y N 706
TRP CZ2 HZ2 sing N N 707
TRP CZ3 CH2 sing Y N 708
TRP CZ3 HZ3 sing N N 709
TRP CH2 HH2 sing N N 710
TRP OXT HXT sing N N 711
TYR N CA sing N N 712
TYR N H sing N N 713
TYR N H2 sing N N 714
TYR CA C sing N N 715
TYR CA CB sing N N 716
TYR CA HA sing N N 717
TYR C O doub N N 718
TYR C OXT sing N N 719
TYR CB CG sing N N 720
TYR CB HB2 sing N N 721
TYR CB HB3 sing N N 722
TYR CG CD1 doub Y N 723
TYR CG CD2 sing Y N 724
TYR CD1 CE1 sing Y N 725
TYR CD1 HD1 sing N N 726
TYR CD2 CE2 doub Y N 727
TYR CD2 HD2 sing N N 728
TYR CE1 CZ doub Y N 729
TYR CE1 HE1 sing N N 730
TYR CE2 CZ sing Y N 731
TYR CE2 HE2 sing N N 732
TYR CZ OH sing N N 733
TYR OH HH sing N N 734
TYR OXT HXT sing N N 735
VAL N CA sing N N 736
VAL N H sing N N 737
VAL N H2 sing N N 738
VAL CA C sing N N 739
VAL CA CB sing N N 740
VAL CA HA sing N N 741
VAL C O doub N N 742
VAL C OXT sing N N 743
VAL CB CG1 sing N N 744
VAL CB CG2 sing N N 745
VAL CB HB sing N N 746
VAL CG1 HG11 sing N N 747
VAL CG1 HG12 sing N N 748
VAL CG1 HG13 sing N N 749
VAL CG2 HG21 sing N N 750
VAL CG2 HG22 sing N N 751
VAL CG2 HG23 sing N N 752
VAL OXT HXT sing N N 753
#
loop_
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_mon_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.hetero
B 2 NAG 1 B NAG 1 A NAG 1335 n
B 2 NAG 2 B NAG 2 A NAG 1336 n
B 2 BMA 3 B BMA 3 A BMA 1337 n
C 2 NAG 1 C NAG 1 A NAG 1338 n
C 2 NAG 2 C NAG 2 A NAG 1339 n
C 2 BMA 3 C BMA 3 A BMA 1340 n
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb
BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose
BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp
BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man
NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb
NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine
NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc
NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc
#
_pdbx_entity_branch.entity_id 2
_pdbx_entity_branch.type oligosaccharide
#
loop_
_pdbx_entity_branch_descriptor.ordinal
_pdbx_entity_branch_descriptor.entity_id
_pdbx_entity_branch_descriptor.descriptor
_pdbx_entity_branch_descriptor.type
_pdbx_entity_branch_descriptor.program
_pdbx_entity_branch_descriptor.program_version
1 2 DManpb1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0
2 2 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5]/1-1-2/a4-b1_b4-c1' WURCS PDB2Glycan 1.1.0
3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{}}}}' LINUCS PDB-CARE ?
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.value_order
_pdbx_entity_branch_link.details
1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ?
2 2 3 BMA C1 O1 2 NAG O4 HO4 sing ?
#
loop_
_pdbx_entity_branch_list.entity_id
_pdbx_entity_branch_list.comp_id
_pdbx_entity_branch_list.num
_pdbx_entity_branch_list.hetero
2 NAG 1 n
2 NAG 2 n
2 BMA 3 n
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
3 'ZINC ION' ZN
4 'ACETYL GROUP' ACE
5 RETINAL RET
6 'PALMITIC ACID' PLM
7 DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE PEF
8 'LAURYL DIMETHYLAMINE-N-OXIDE' LDA
9 '(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE' C8E
10 water HOH
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 1GZM
_pdbx_initial_refinement_model.details 'The A chain of PDB entry 1GZM, after suitable transformation to this space group.'
#