data_3C9Z
#
_entry.id 3C9Z
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.397
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 3C9Z pdb_00003c9z 10.2210/pdb3c9z/pdb
RCSB RCSB046527 ? ?
WWPDB D_1000046527 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2008-11-25
2 'Structure model' 1 1 2011-07-13
3 'Structure model' 2 0 2020-07-29
4 'Structure model' 2 1 2024-04-03
5 'Structure model' 2 2 2024-10-30
#
loop_
_pdbx_audit_revision_details.ordinal
_pdbx_audit_revision_details.revision_ordinal
_pdbx_audit_revision_details.data_content_type
_pdbx_audit_revision_details.provider
_pdbx_audit_revision_details.type
_pdbx_audit_revision_details.description
_pdbx_audit_revision_details.details
1 1 'Structure model' repository 'Initial release' ? ?
2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Non-polymer description'
2 2 'Structure model' 'Version format compliance'
3 3 'Structure model' 'Atomic model'
4 3 'Structure model' 'Data collection'
5 3 'Structure model' 'Derived calculations'
6 3 'Structure model' 'Structure summary'
7 4 'Structure model' 'Data collection'
8 4 'Structure model' 'Database references'
9 4 'Structure model' 'Refinement description'
10 4 'Structure model' 'Structure summary'
11 5 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 3 'Structure model' atom_site
2 3 'Structure model' atom_site_anisotrop
3 3 'Structure model' chem_comp
4 3 'Structure model' entity
5 3 'Structure model' pdbx_branch_scheme
6 3 'Structure model' pdbx_chem_comp_identifier
7 3 'Structure model' pdbx_entity_branch
8 3 'Structure model' pdbx_entity_branch_descriptor
9 3 'Structure model' pdbx_entity_branch_link
10 3 'Structure model' pdbx_entity_branch_list
11 3 'Structure model' pdbx_entity_nonpoly
12 3 'Structure model' pdbx_nonpoly_scheme
13 3 'Structure model' pdbx_struct_assembly_gen
14 3 'Structure model' pdbx_struct_special_symmetry
15 3 'Structure model' struct_asym
16 3 'Structure model' struct_conn
17 3 'Structure model' struct_site
18 3 'Structure model' struct_site_gen
19 4 'Structure model' chem_comp
20 4 'Structure model' chem_comp_atom
21 4 'Structure model' chem_comp_bond
22 4 'Structure model' database_2
23 4 'Structure model' pdbx_initial_refinement_model
24 5 'Structure model' pdbx_entry_details
25 5 'Structure model' pdbx_modification_feature
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 3 'Structure model' '_atom_site.B_iso_or_equiv'
2 3 'Structure model' '_atom_site.Cartn_x'
3 3 'Structure model' '_atom_site.Cartn_y'
4 3 'Structure model' '_atom_site.Cartn_z'
5 3 'Structure model' '_atom_site.auth_asym_id'
6 3 'Structure model' '_atom_site.auth_atom_id'
7 3 'Structure model' '_atom_site.auth_comp_id'
8 3 'Structure model' '_atom_site.auth_seq_id'
9 3 'Structure model' '_atom_site.label_asym_id'
10 3 'Structure model' '_atom_site.label_atom_id'
11 3 'Structure model' '_atom_site.label_comp_id'
12 3 'Structure model' '_atom_site.label_entity_id'
13 3 'Structure model' '_atom_site.type_symbol'
14 3 'Structure model' '_atom_site_anisotrop.U[1][1]'
15 3 'Structure model' '_atom_site_anisotrop.U[1][2]'
16 3 'Structure model' '_atom_site_anisotrop.U[1][3]'
17 3 'Structure model' '_atom_site_anisotrop.U[2][2]'
18 3 'Structure model' '_atom_site_anisotrop.U[2][3]'
19 3 'Structure model' '_atom_site_anisotrop.U[3][3]'
20 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id'
21 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id'
22 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id'
23 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id'
24 3 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id'
25 3 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id'
26 3 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id'
27 3 'Structure model' '_atom_site_anisotrop.type_symbol'
28 3 'Structure model' '_chem_comp.name'
29 3 'Structure model' '_chem_comp.type'
30 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list'
31 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
32 3 'Structure model' '_struct_conn.pdbx_role'
33 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id'
34 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
35 3 'Structure model' '_struct_conn.ptnr1_label_asym_id'
36 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id'
37 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
38 3 'Structure model' '_struct_conn.ptnr2_label_asym_id'
39 4 'Structure model' '_chem_comp.pdbx_synonyms'
40 4 'Structure model' '_database_2.pdbx_DOI'
41 4 'Structure model' '_database_2.pdbx_database_accession'
42 5 'Structure model' '_pdbx_entry_details.has_protein_modification'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 3C9Z
_pdbx_database_status.recvd_initial_deposition_date 2008-02-19
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.details
_pdbx_database_related.content_type
PDB 3CA0 'Sambucus nigra agglutinin II - hexagonal crystal form' unspecified
PDB 3CA1 'Sambucus nigra agglutinin II - tetragonal crystal form - complexed to galactose' unspecified
PDB 3CA3 'Sambucus nigra agglutinin II - tetragonal crystal form - complexed to N-acetygalactosamine' unspecified
PDB 3CA4 'Sambucus nigra agglutinin II - tetragonal crystal form - complexed to lactose' unspecified
PDB 3CA5 'Sambucus nigra agglutinin II - tetragonal crystal form - complexed to methyl-galactose' unspecified
PDB 3CA6 'Sambucus nigra agglutinin II - tetragonal crystal form - complexed to Tn antigen' unspecified
PDB 3CAH 'Sambucus nigra agglutinin II - tetragonal crystal form - complexed to fucose' unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Maveyraud, L.' 1
'Guillet, V.' 2
'Mourey, L.' 3
#
_citation.id primary
_citation.title
'Structural basis for sugar recognition, including the Tn carcinoma antigen, by the lectin SNA-II from Sambucus nigra'
_citation.journal_abbrev Proteins
_citation.journal_volume 75
_citation.page_first 89
_citation.page_last 103
_citation.year 2009
_citation.journal_id_ASTM PSFGEY
_citation.country US
_citation.journal_id_ISSN 0887-3585
_citation.journal_id_CSD 0867
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 18798567
_citation.pdbx_database_id_DOI 10.1002/prot.22222
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Maveyraud, L.' 1 ?
primary 'Niwa, H.' 2 ?
primary 'Guillet, V.' 3 ?
primary 'Svergun, D.I.' 4 ?
primary 'Konarev, P.V.' 5 ?
primary 'Palmer, R.A.' 6 ?
primary 'Peumans, W.J.' 7 ?
primary 'Rouge, P.' 8 ?
primary 'Van Damme, E.J.' 9 ?
primary 'Reynolds, C.D.' 10 ?
primary 'Mourey, L.' 11 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer nat 'Agglutinin II' 28439.059 1 ? ? ? ?
2 branched man
'alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose' 570.542 2
? ? ? ?
3 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 1 ? ? ? ?
4 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ?
5 non-polymer syn 'SULFATE ION' 96.063 4 ? ? ? ?
6 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ?
7 water nat water 18.015 245 ? ? ? ?
#
_entity_name_com.entity_id 1
_entity_name_com.name SNA-II
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code
;TSFTRNIVGRDGLCVDVRNGYDTDGTPLQLWPCGTQRNQRWTFDSDDTIRSMGKCMTANGLNNGSNIVIFNCSTAAENAI
KWEVPIDGSIINPSSGLVMTAPRAASRTILLLEDNIYAASQGWTVTNNVKPIVASIVGYKEMCLQSNGENNGVWMEDCEA
TSLQQQWALYGDRTIRVNSTRGLCVTTNGYNSKDLIIILKCQGLPSQRWFFNSDGAIVNPKSRLVMDVRASNVSLREIII
FPATGNPNQQWVTQVLPS
;
_entity_poly.pdbx_seq_one_letter_code_can
;TSFTRNIVGRDGLCVDVRNGYDTDGTPLQLWPCGTQRNQRWTFDSDDTIRSMGKCMTANGLNNGSNIVIFNCSTAAENAI
KWEVPIDGSIINPSSGLVMTAPRAASRTILLLEDNIYAASQGWTVTNNVKPIVASIVGYKEMCLQSNGENNGVWMEDCEA
TSLQQQWALYGDRTIRVNSTRGLCVTTNGYNSKDLIIILKCQGLPSQRWFFNSDGAIVNPKSRLVMDVRASNVSLREIII
FPATGNPNQQWVTQVLPS
;
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
4 2-acetamido-2-deoxy-beta-D-glucopyranose NAG
5 'SULFATE ION' SO4
6 'ACETATE ION' ACT
7 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 THR n
1 2 SER n
1 3 PHE n
1 4 THR n
1 5 ARG n
1 6 ASN n
1 7 ILE n
1 8 VAL n
1 9 GLY n
1 10 ARG n
1 11 ASP n
1 12 GLY n
1 13 LEU n
1 14 CYS n
1 15 VAL n
1 16 ASP n
1 17 VAL n
1 18 ARG n
1 19 ASN n
1 20 GLY n
1 21 TYR n
1 22 ASP n
1 23 THR n
1 24 ASP n
1 25 GLY n
1 26 THR n
1 27 PRO n
1 28 LEU n
1 29 GLN n
1 30 LEU n
1 31 TRP n
1 32 PRO n
1 33 CYS n
1 34 GLY n
1 35 THR n
1 36 GLN n
1 37 ARG n
1 38 ASN n
1 39 GLN n
1 40 ARG n
1 41 TRP n
1 42 THR n
1 43 PHE n
1 44 ASP n
1 45 SER n
1 46 ASP n
1 47 ASP n
1 48 THR n
1 49 ILE n
1 50 ARG n
1 51 SER n
1 52 MET n
1 53 GLY n
1 54 LYS n
1 55 CYS n
1 56 MET n
1 57 THR n
1 58 ALA n
1 59 ASN n
1 60 GLY n
1 61 LEU n
1 62 ASN n
1 63 ASN n
1 64 GLY n
1 65 SER n
1 66 ASN n
1 67 ILE n
1 68 VAL n
1 69 ILE n
1 70 PHE n
1 71 ASN n
1 72 CYS n
1 73 SER n
1 74 THR n
1 75 ALA n
1 76 ALA n
1 77 GLU n
1 78 ASN n
1 79 ALA n
1 80 ILE n
1 81 LYS n
1 82 TRP n
1 83 GLU n
1 84 VAL n
1 85 PRO n
1 86 ILE n
1 87 ASP n
1 88 GLY n
1 89 SER n
1 90 ILE n
1 91 ILE n
1 92 ASN n
1 93 PRO n
1 94 SER n
1 95 SER n
1 96 GLY n
1 97 LEU n
1 98 VAL n
1 99 MET n
1 100 THR n
1 101 ALA n
1 102 PRO n
1 103 ARG n
1 104 ALA n
1 105 ALA n
1 106 SER n
1 107 ARG n
1 108 THR n
1 109 ILE n
1 110 LEU n
1 111 LEU n
1 112 LEU n
1 113 GLU n
1 114 ASP n
1 115 ASN n
1 116 ILE n
1 117 TYR n
1 118 ALA n
1 119 ALA n
1 120 SER n
1 121 GLN n
1 122 GLY n
1 123 TRP n
1 124 THR n
1 125 VAL n
1 126 THR n
1 127 ASN n
1 128 ASN n
1 129 VAL n
1 130 LYS n
1 131 PRO n
1 132 ILE n
1 133 VAL n
1 134 ALA n
1 135 SER n
1 136 ILE n
1 137 VAL n
1 138 GLY n
1 139 TYR n
1 140 LYS n
1 141 GLU n
1 142 MET n
1 143 CYS n
1 144 LEU n
1 145 GLN n
1 146 SER n
1 147 ASN n
1 148 GLY n
1 149 GLU n
1 150 ASN n
1 151 ASN n
1 152 GLY n
1 153 VAL n
1 154 TRP n
1 155 MET n
1 156 GLU n
1 157 ASP n
1 158 CYS n
1 159 GLU n
1 160 ALA n
1 161 THR n
1 162 SER n
1 163 LEU n
1 164 GLN n
1 165 GLN n
1 166 GLN n
1 167 TRP n
1 168 ALA n
1 169 LEU n
1 170 TYR n
1 171 GLY n
1 172 ASP n
1 173 ARG n
1 174 THR n
1 175 ILE n
1 176 ARG n
1 177 VAL n
1 178 ASN n
1 179 SER n
1 180 THR n
1 181 ARG n
1 182 GLY n
1 183 LEU n
1 184 CYS n
1 185 VAL n
1 186 THR n
1 187 THR n
1 188 ASN n
1 189 GLY n
1 190 TYR n
1 191 ASN n
1 192 SER n
1 193 LYS n
1 194 ASP n
1 195 LEU n
1 196 ILE n
1 197 ILE n
1 198 ILE n
1 199 LEU n
1 200 LYS n
1 201 CYS n
1 202 GLN n
1 203 GLY n
1 204 LEU n
1 205 PRO n
1 206 SER n
1 207 GLN n
1 208 ARG n
1 209 TRP n
1 210 PHE n
1 211 PHE n
1 212 ASN n
1 213 SER n
1 214 ASP n
1 215 GLY n
1 216 ALA n
1 217 ILE n
1 218 VAL n
1 219 ASN n
1 220 PRO n
1 221 LYS n
1 222 SER n
1 223 ARG n
1 224 LEU n
1 225 VAL n
1 226 MET n
1 227 ASP n
1 228 VAL n
1 229 ARG n
1 230 ALA n
1 231 SER n
1 232 ASN n
1 233 VAL n
1 234 SER n
1 235 LEU n
1 236 ARG n
1 237 GLU n
1 238 ILE n
1 239 ILE n
1 240 ILE n
1 241 PHE n
1 242 PRO n
1 243 ALA n
1 244 THR n
1 245 GLY n
1 246 ASN n
1 247 PRO n
1 248 ASN n
1 249 GLN n
1 250 GLN n
1 251 TRP n
1 252 VAL n
1 253 THR n
1 254 GLN n
1 255 VAL n
1 256 LEU n
1 257 PRO n
1 258 SER n
#
_entity_src_nat.entity_id 1
_entity_src_nat.pdbx_src_id 1
_entity_src_nat.pdbx_alt_source_flag sample
_entity_src_nat.pdbx_beg_seq_num ?
_entity_src_nat.pdbx_end_seq_num ?
_entity_src_nat.common_name 'European elder, elderberry'
_entity_src_nat.pdbx_organism_scientific 'Sambucus nigra'
_entity_src_nat.pdbx_ncbi_taxonomy_id ?
_entity_src_nat.genus ?
_entity_src_nat.species ?
_entity_src_nat.strain ?
_entity_src_nat.tissue Bark
_entity_src_nat.tissue_fraction ?
_entity_src_nat.pdbx_secretion ?
_entity_src_nat.pdbx_fragment ?
_entity_src_nat.pdbx_variant ?
_entity_src_nat.pdbx_cell_line ?
_entity_src_nat.pdbx_atcc ?
_entity_src_nat.pdbx_cellular_location ?
_entity_src_nat.pdbx_organ ?
_entity_src_nat.pdbx_organelle ?
_entity_src_nat.pdbx_cell ?
_entity_src_nat.pdbx_plasmid_name ?
_entity_src_nat.pdbx_plasmid_details ?
_entity_src_nat.details ?
#
loop_
_pdbx_entity_branch.entity_id
_pdbx_entity_branch.type
2 oligosaccharide
3 oligosaccharide
#
loop_
_pdbx_entity_branch_descriptor.ordinal
_pdbx_entity_branch_descriptor.entity_id
_pdbx_entity_branch_descriptor.descriptor
_pdbx_entity_branch_descriptor.type
_pdbx_entity_branch_descriptor.program
_pdbx_entity_branch_descriptor.program_version
1 2 'LFucpa1-3[DGlcpNAcb1-4]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0
2 2 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5]/1-2-1/a3-b1_a4-c1' WURCS PDB2Glycan 1.1.0
3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(3+1)][a-L-Fucp]{}[(4+1)][b-D-GlcpNAc]{}}}' LINUCS PDB-CARE ?
4 3 DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0
5 3 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0
6 3 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}' LINUCS PDB-CARE ?
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.value_order
_pdbx_entity_branch_link.details
1 2 2 FUC C1 O1 1 NAG O3 HO3 sing ?
2 2 3 NAG C1 O1 1 NAG O4 HO4 sing ?
3 3 2 NAG C1 O1 1 NAG O4 HO4 sing ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158
FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose
'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose
;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
;
'C8 H15 N O6' 221.208
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa
FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose
FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp
FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc
NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb
NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine
NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc
NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 THR 1 1 1 THR THR A . n
A 1 2 SER 2 2 2 SER SER A . n
A 1 3 PHE 3 3 3 PHE PHE A . n
A 1 4 THR 4 4 4 THR THR A . n
A 1 5 ARG 5 5 5 ARG ARG A . n
A 1 6 ASN 6 6 6 ASN ASN A . n
A 1 7 ILE 7 7 7 ILE ILE A . n
A 1 8 VAL 8 8 8 VAL VAL A . n
A 1 9 GLY 9 9 9 GLY GLY A . n
A 1 10 ARG 10 10 10 ARG ARG A . n
A 1 11 ASP 11 11 11 ASP ASP A . n
A 1 12 GLY 12 12 12 GLY GLY A . n
A 1 13 LEU 13 13 13 LEU LEU A . n
A 1 14 CYS 14 14 14 CYS CYS A . n
A 1 15 VAL 15 15 15 VAL VAL A . n
A 1 16 ASP 16 16 16 ASP ASP A . n
A 1 17 VAL 17 17 17 VAL VAL A . n
A 1 18 ARG 18 18 18 ARG ARG A . n
A 1 19 ASN 19 19 19 ASN ASN A . n
A 1 20 GLY 20 20 20 GLY GLY A . n
A 1 21 TYR 21 21 21 TYR TYR A . n
A 1 22 ASP 22 22 22 ASP ASP A . n
A 1 23 THR 23 23 23 THR THR A . n
A 1 24 ASP 24 24 24 ASP ASP A . n
A 1 25 GLY 25 25 25 GLY GLY A . n
A 1 26 THR 26 26 26 THR THR A . n
A 1 27 PRO 27 27 27 PRO PRO A . n
A 1 28 LEU 28 28 28 LEU LEU A . n
A 1 29 GLN 29 29 29 GLN GLN A . n
A 1 30 LEU 30 30 30 LEU LEU A . n
A 1 31 TRP 31 31 31 TRP TRP A . n
A 1 32 PRO 32 32 32 PRO PRO A . n
A 1 33 CYS 33 33 33 CYS CYS A . n
A 1 34 GLY 34 34 34 GLY GLY A . n
A 1 35 THR 35 35 35 THR THR A . n
A 1 36 GLN 36 36 36 GLN GLN A . n
A 1 37 ARG 37 37 37 ARG ARG A . n
A 1 38 ASN 38 38 38 ASN ASN A . n
A 1 39 GLN 39 39 39 GLN GLN A . n
A 1 40 ARG 40 40 40 ARG ARG A . n
A 1 41 TRP 41 41 41 TRP TRP A . n
A 1 42 THR 42 42 42 THR THR A . n
A 1 43 PHE 43 43 43 PHE PHE A . n
A 1 44 ASP 44 44 44 ASP ASP A . n
A 1 45 SER 45 45 45 SER SER A . n
A 1 46 ASP 46 46 46 ASP ASP A . n
A 1 47 ASP 47 47 47 ASP ASP A . n
A 1 48 THR 48 48 48 THR THR A . n
A 1 49 ILE 49 49 49 ILE ILE A . n
A 1 50 ARG 50 50 50 ARG ARG A . n
A 1 51 SER 51 51 51 SER SER A . n
A 1 52 MET 52 52 52 MET MET A . n
A 1 53 GLY 53 53 53 GLY GLY A . n
A 1 54 LYS 54 54 54 LYS LYS A . n
A 1 55 CYS 55 55 55 CYS CYS A . n
A 1 56 MET 56 56 56 MET MET A . n
A 1 57 THR 57 57 57 THR THR A . n
A 1 58 ALA 58 58 58 ALA ALA A . n
A 1 59 ASN 59 59 59 ASN ASN A . n
A 1 60 GLY 60 60 60 GLY GLY A . n
A 1 61 LEU 61 61 61 LEU LEU A . n
A 1 62 ASN 62 62 62 ASN ASN A . n
A 1 63 ASN 63 63 63 ASN ASN A . n
A 1 64 GLY 64 64 64 GLY GLY A . n
A 1 65 SER 65 65 65 SER SER A . n
A 1 66 ASN 66 66 66 ASN ASN A . n
A 1 67 ILE 67 67 67 ILE ILE A . n
A 1 68 VAL 68 68 68 VAL VAL A . n
A 1 69 ILE 69 69 69 ILE ILE A . n
A 1 70 PHE 70 70 70 PHE PHE A . n
A 1 71 ASN 71 71 71 ASN ASN A . n
A 1 72 CYS 72 72 72 CYS CYS A . n
A 1 73 SER 73 73 73 SER SER A . n
A 1 74 THR 74 74 74 THR THR A . n
A 1 75 ALA 75 75 75 ALA ALA A . n
A 1 76 ALA 76 76 76 ALA ALA A . n
A 1 77 GLU 77 77 77 GLU GLU A . n
A 1 78 ASN 78 78 78 ASN ASN A . n
A 1 79 ALA 79 79 79 ALA ALA A . n
A 1 80 ILE 80 80 80 ILE ILE A . n
A 1 81 LYS 81 81 81 LYS LYS A . n
A 1 82 TRP 82 82 82 TRP TRP A . n
A 1 83 GLU 83 83 83 GLU GLU A . n
A 1 84 VAL 84 84 84 VAL VAL A . n
A 1 85 PRO 85 85 85 PRO PRO A . n
A 1 86 ILE 86 86 86 ILE ILE A . n
A 1 87 ASP 87 87 87 ASP ASP A . n
A 1 88 GLY 88 88 88 GLY GLY A . n
A 1 89 SER 89 89 89 SER SER A . n
A 1 90 ILE 90 90 90 ILE ILE A . n
A 1 91 ILE 91 91 91 ILE ILE A . n
A 1 92 ASN 92 92 92 ASN ASN A . n
A 1 93 PRO 93 93 93 PRO PRO A . n
A 1 94 SER 94 94 94 SER SER A . n
A 1 95 SER 95 95 95 SER SER A . n
A 1 96 GLY 96 96 96 GLY GLY A . n
A 1 97 LEU 97 97 97 LEU LEU A . n
A 1 98 VAL 98 98 98 VAL VAL A . n
A 1 99 MET 99 99 99 MET MET A . n
A 1 100 THR 100 100 100 THR THR A . n
A 1 101 ALA 101 101 101 ALA ALA A . n
A 1 102 PRO 102 102 102 PRO PRO A . n
A 1 103 ARG 103 103 103 ARG ARG A . n
A 1 104 ALA 104 104 104 ALA ALA A . n
A 1 105 ALA 105 105 105 ALA ALA A . n
A 1 106 SER 106 106 106 SER SER A . n
A 1 107 ARG 107 107 107 ARG ARG A . n
A 1 108 THR 108 108 108 THR THR A . n
A 1 109 ILE 109 109 109 ILE ILE A . n
A 1 110 LEU 110 110 110 LEU LEU A . n
A 1 111 LEU 111 111 111 LEU LEU A . n
A 1 112 LEU 112 112 112 LEU LEU A . n
A 1 113 GLU 113 113 113 GLU GLU A . n
A 1 114 ASP 114 114 114 ASP ASP A . n
A 1 115 ASN 115 115 115 ASN ASN A . n
A 1 116 ILE 116 116 116 ILE ILE A . n
A 1 117 TYR 117 117 117 TYR TYR A . n
A 1 118 ALA 118 118 118 ALA ALA A . n
A 1 119 ALA 119 119 119 ALA ALA A . n
A 1 120 SER 120 120 120 SER SER A . n
A 1 121 GLN 121 121 121 GLN GLN A . n
A 1 122 GLY 122 122 122 GLY GLY A . n
A 1 123 TRP 123 123 123 TRP TRP A . n
A 1 124 THR 124 124 124 THR THR A . n
A 1 125 VAL 125 125 125 VAL VAL A . n
A 1 126 THR 126 126 126 THR THR A . n
A 1 127 ASN 127 127 127 ASN ASN A . n
A 1 128 ASN 128 128 128 ASN ASN A . n
A 1 129 VAL 129 129 129 VAL VAL A . n
A 1 130 LYS 130 130 130 LYS LYS A . n
A 1 131 PRO 131 131 131 PRO PRO A . n
A 1 132 ILE 132 132 132 ILE ILE A . n
A 1 133 VAL 133 133 133 VAL VAL A . n
A 1 134 ALA 134 134 134 ALA ALA A . n
A 1 135 SER 135 135 135 SER SER A . n
A 1 136 ILE 136 136 136 ILE ILE A . n
A 1 137 VAL 137 137 137 VAL VAL A . n
A 1 138 GLY 138 138 138 GLY GLY A . n
A 1 139 TYR 139 139 139 TYR TYR A . n
A 1 140 LYS 140 140 140 LYS LYS A . n
A 1 141 GLU 141 141 141 GLU GLU A . n
A 1 142 MET 142 142 142 MET MET A . n
A 1 143 CYS 143 143 143 CYS CYS A . n
A 1 144 LEU 144 144 144 LEU LEU A . n
A 1 145 GLN 145 145 145 GLN GLN A . n
A 1 146 SER 146 146 146 SER SER A . n
A 1 147 ASN 147 147 147 ASN ASN A . n
A 1 148 GLY 148 148 148 GLY GLY A . n
A 1 149 GLU 149 149 149 GLU GLU A . n
A 1 150 ASN 150 150 150 ASN ASN A . n
A 1 151 ASN 151 151 151 ASN ASN A . n
A 1 152 GLY 152 152 152 GLY GLY A . n
A 1 153 VAL 153 153 153 VAL VAL A . n
A 1 154 TRP 154 154 154 TRP TRP A . n
A 1 155 MET 155 155 155 MET MET A . n
A 1 156 GLU 156 156 156 GLU GLU A . n
A 1 157 ASP 157 157 157 ASP ASP A . n
A 1 158 CYS 158 158 158 CYS CYS A . n
A 1 159 GLU 159 159 159 GLU GLU A . n
A 1 160 ALA 160 160 160 ALA ALA A . n
A 1 161 THR 161 161 161 THR THR A . n
A 1 162 SER 162 162 162 SER SER A . n
A 1 163 LEU 163 163 163 LEU LEU A . n
A 1 164 GLN 164 164 164 GLN GLN A . n
A 1 165 GLN 165 165 165 GLN GLN A . n
A 1 166 GLN 166 166 166 GLN GLN A . n
A 1 167 TRP 167 167 167 TRP TRP A . n
A 1 168 ALA 168 168 168 ALA ALA A . n
A 1 169 LEU 169 169 169 LEU LEU A . n
A 1 170 TYR 170 170 170 TYR TYR A . n
A 1 171 GLY 171 171 171 GLY GLY A . n
A 1 172 ASP 172 172 172 ASP ASP A . n
A 1 173 ARG 173 173 173 ARG ARG A . n
A 1 174 THR 174 174 174 THR THR A . n
A 1 175 ILE 175 175 175 ILE ILE A . n
A 1 176 ARG 176 176 176 ARG ARG A . n
A 1 177 VAL 177 177 177 VAL VAL A . n
A 1 178 ASN 178 178 178 ASN ASN A . n
A 1 179 SER 179 179 179 SER SER A . n
A 1 180 THR 180 180 180 THR THR A . n
A 1 181 ARG 181 181 181 ARG ARG A . n
A 1 182 GLY 182 182 182 GLY GLY A . n
A 1 183 LEU 183 183 183 LEU LEU A . n
A 1 184 CYS 184 184 184 CYS CYS A . n
A 1 185 VAL 185 185 185 VAL VAL A . n
A 1 186 THR 186 186 186 THR THR A . n
A 1 187 THR 187 187 187 THR THR A . n
A 1 188 ASN 188 188 188 ASN ASN A . n
A 1 189 GLY 189 189 189 GLY GLY A . n
A 1 190 TYR 190 190 190 TYR TYR A . n
A 1 191 ASN 191 191 191 ASN ASN A . n
A 1 192 SER 192 192 192 SER SER A . n
A 1 193 LYS 193 193 193 LYS LYS A . n
A 1 194 ASP 194 194 194 ASP ASP A . n
A 1 195 LEU 195 195 195 LEU LEU A . n
A 1 196 ILE 196 196 196 ILE ILE A . n
A 1 197 ILE 197 197 197 ILE ILE A . n
A 1 198 ILE 198 198 198 ILE ILE A . n
A 1 199 LEU 199 199 199 LEU LEU A . n
A 1 200 LYS 200 200 200 LYS LYS A . n
A 1 201 CYS 201 201 201 CYS CYS A . n
A 1 202 GLN 202 202 202 GLN GLN A . n
A 1 203 GLY 203 203 203 GLY GLY A . n
A 1 204 LEU 204 204 204 LEU LEU A . n
A 1 205 PRO 205 205 205 PRO PRO A . n
A 1 206 SER 206 206 206 SER SER A . n
A 1 207 GLN 207 207 207 GLN GLN A . n
A 1 208 ARG 208 208 208 ARG ARG A . n
A 1 209 TRP 209 209 209 TRP TRP A . n
A 1 210 PHE 210 210 210 PHE PHE A . n
A 1 211 PHE 211 211 211 PHE PHE A . n
A 1 212 ASN 212 212 212 ASN ASN A . n
A 1 213 SER 213 213 213 SER SER A . n
A 1 214 ASP 214 214 214 ASP ASP A . n
A 1 215 GLY 215 215 215 GLY GLY A . n
A 1 216 ALA 216 216 216 ALA ALA A . n
A 1 217 ILE 217 217 217 ILE ILE A . n
A 1 218 VAL 218 218 218 VAL VAL A . n
A 1 219 ASN 219 219 219 ASN ASN A . n
A 1 220 PRO 220 220 220 PRO PRO A . n
A 1 221 LYS 221 221 221 LYS LYS A . n
A 1 222 SER 222 222 222 SER SER A . n
A 1 223 ARG 223 223 223 ARG ARG A . n
A 1 224 LEU 224 224 224 LEU LEU A . n
A 1 225 VAL 225 225 225 VAL VAL A . n
A 1 226 MET 226 226 226 MET MET A . n
A 1 227 ASP 227 227 227 ASP ASP A . n
A 1 228 VAL 228 228 228 VAL VAL A . n
A 1 229 ARG 229 229 229 ARG ARG A . n
A 1 230 ALA 230 230 230 ALA ALA A . n
A 1 231 SER 231 231 231 SER SER A . n
A 1 232 ASN 232 232 232 ASN ASN A . n
A 1 233 VAL 233 233 233 VAL VAL A . n
A 1 234 SER 234 234 234 SER SER A . n
A 1 235 LEU 235 235 235 LEU LEU A . n
A 1 236 ARG 236 236 236 ARG ARG A . n
A 1 237 GLU 237 237 237 GLU GLU A . n
A 1 238 ILE 238 238 238 ILE ILE A . n
A 1 239 ILE 239 239 239 ILE ILE A . n
A 1 240 ILE 240 240 240 ILE ILE A . n
A 1 241 PHE 241 241 241 PHE PHE A . n
A 1 242 PRO 242 242 242 PRO PRO A . n
A 1 243 ALA 243 243 243 ALA ALA A . n
A 1 244 THR 244 244 244 THR THR A . n
A 1 245 GLY 245 245 245 GLY GLY A . n
A 1 246 ASN 246 246 246 ASN ASN A . n
A 1 247 PRO 247 247 247 PRO PRO A . n
A 1 248 ASN 248 248 248 ASN ASN A . n
A 1 249 GLN 249 249 249 GLN GLN A . n
A 1 250 GLN 250 250 250 GLN GLN A . n
A 1 251 TRP 251 251 251 TRP TRP A . n
A 1 252 VAL 252 252 252 VAL VAL A . n
A 1 253 THR 253 253 253 THR THR A . n
A 1 254 GLN 254 254 254 GLN GLN A . n
A 1 255 VAL 255 255 255 VAL VAL A . n
A 1 256 LEU 256 256 256 LEU LEU A . n
A 1 257 PRO 257 257 257 PRO PRO A . n
A 1 258 SER 258 258 ? ? ? A . n
#
loop_
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_mon_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.hetero
B 2 NAG 1 B NAG 1 B NAG 1 n
B 2 FUC 2 B FUC 2 B FUC 5 n
B 2 NAG 3 B NAG 3 B NAG 2 n
C 2 NAG 1 C NAG 1 B NAG 11 n
C 2 FUC 2 C FUC 2 B FUC 15 n
C 2 NAG 3 C NAG 3 B NAG 12 n
D 3 NAG 1 D NAG 1 B NAG 21 n
D 3 NAG 2 D NAG 2 B NAG 22 n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 4 NAG 1 266 31 NAG NAG A .
F 5 SO4 1 901 901 SO4 SO4 A .
G 5 SO4 1 902 902 SO4 SO4 A .
H 5 SO4 1 903 903 SO4 SO4 A .
I 5 SO4 1 904 904 SO4 SO4 A .
J 6 ACT 1 910 910 ACT ACT A .
K 7 HOH 1 911 1 HOH HOH A .
K 7 HOH 2 912 2 HOH HOH A .
K 7 HOH 3 913 3 HOH HOH A .
K 7 HOH 4 914 4 HOH HOH A .
K 7 HOH 5 915 5 HOH HOH A .
K 7 HOH 6 916 6 HOH HOH A .
K 7 HOH 7 917 7 HOH HOH A .
K 7 HOH 8 918 8 HOH HOH A .
K 7 HOH 9 919 9 HOH HOH A .
K 7 HOH 10 920 10 HOH HOH A .
K 7 HOH 11 921 11 HOH HOH A .
K 7 HOH 12 922 12 HOH HOH A .
K 7 HOH 13 923 13 HOH HOH A .
K 7 HOH 14 924 14 HOH HOH A .
K 7 HOH 15 925 15 HOH HOH A .
K 7 HOH 16 926 16 HOH HOH A .
K 7 HOH 17 927 17 HOH HOH A .
K 7 HOH 18 928 18 HOH HOH A .
K 7 HOH 19 929 19 HOH HOH A .
K 7 HOH 20 930 20 HOH HOH A .
K 7 HOH 21 931 21 HOH HOH A .
K 7 HOH 22 932 22 HOH HOH A .
K 7 HOH 23 933 23 HOH HOH A .
K 7 HOH 24 934 24 HOH HOH A .
K 7 HOH 25 935 25 HOH HOH A .
K 7 HOH 26 936 26 HOH HOH A .
K 7 HOH 27 937 27 HOH HOH A .
K 7 HOH 28 938 28 HOH HOH A .
K 7 HOH 29 939 29 HOH HOH A .
K 7 HOH 30 940 30 HOH HOH A .
K 7 HOH 31 941 31 HOH HOH A .
K 7 HOH 32 942 32 HOH HOH A .
K 7 HOH 33 943 33 HOH HOH A .
K 7 HOH 34 944 34 HOH HOH A .
K 7 HOH 35 945 35 HOH HOH A .
K 7 HOH 36 946 36 HOH HOH A .
K 7 HOH 37 947 37 HOH HOH A .
K 7 HOH 38 948 38 HOH HOH A .
K 7 HOH 39 949 39 HOH HOH A .
K 7 HOH 40 950 40 HOH HOH A .
K 7 HOH 41 951 41 HOH HOH A .
K 7 HOH 42 952 42 HOH HOH A .
K 7 HOH 43 953 43 HOH HOH A .
K 7 HOH 44 954 44 HOH HOH A .
K 7 HOH 45 955 45 HOH HOH A .
K 7 HOH 46 956 46 HOH HOH A .
K 7 HOH 47 957 47 HOH HOH A .
K 7 HOH 48 958 48 HOH HOH A .
K 7 HOH 49 959 49 HOH HOH A .
K 7 HOH 50 960 50 HOH HOH A .
K 7 HOH 51 961 51 HOH HOH A .
K 7 HOH 52 962 52 HOH HOH A .
K 7 HOH 53 963 53 HOH HOH A .
K 7 HOH 54 964 54 HOH HOH A .
K 7 HOH 55 965 55 HOH HOH A .
K 7 HOH 56 966 56 HOH HOH A .
K 7 HOH 57 967 57 HOH HOH A .
K 7 HOH 58 968 58 HOH HOH A .
K 7 HOH 59 969 59 HOH HOH A .
K 7 HOH 60 970 60 HOH HOH A .
K 7 HOH 61 971 61 HOH HOH A .
K 7 HOH 62 972 62 HOH HOH A .
K 7 HOH 63 973 63 HOH HOH A .
K 7 HOH 64 974 64 HOH HOH A .
K 7 HOH 65 975 65 HOH HOH A .
K 7 HOH 66 976 66 HOH HOH A .
K 7 HOH 67 977 67 HOH HOH A .
K 7 HOH 68 978 68 HOH HOH A .
K 7 HOH 69 979 69 HOH HOH A .
K 7 HOH 70 980 70 HOH HOH A .
K 7 HOH 71 981 71 HOH HOH A .
K 7 HOH 72 982 72 HOH HOH A .
K 7 HOH 73 983 73 HOH HOH A .
K 7 HOH 74 984 74 HOH HOH A .
K 7 HOH 75 985 75 HOH HOH A .
K 7 HOH 76 986 76 HOH HOH A .
K 7 HOH 77 987 77 HOH HOH A .
K 7 HOH 78 988 78 HOH HOH A .
K 7 HOH 79 989 79 HOH HOH A .
K 7 HOH 80 990 80 HOH HOH A .
K 7 HOH 81 991 81 HOH HOH A .
K 7 HOH 82 992 82 HOH HOH A .
K 7 HOH 83 993 83 HOH HOH A .
K 7 HOH 84 994 84 HOH HOH A .
K 7 HOH 85 995 85 HOH HOH A .
K 7 HOH 86 996 86 HOH HOH A .
K 7 HOH 87 997 87 HOH HOH A .
K 7 HOH 88 998 88 HOH HOH A .
K 7 HOH 89 999 89 HOH HOH A .
K 7 HOH 90 1000 90 HOH HOH A .
K 7 HOH 91 1001 91 HOH HOH A .
K 7 HOH 92 1002 92 HOH HOH A .
K 7 HOH 93 1003 93 HOH HOH A .
K 7 HOH 94 1004 94 HOH HOH A .
K 7 HOH 95 1005 95 HOH HOH A .
K 7 HOH 96 1006 96 HOH HOH A .
K 7 HOH 97 1007 97 HOH HOH A .
K 7 HOH 98 1008 98 HOH HOH A .
K 7 HOH 99 1009 99 HOH HOH A .
K 7 HOH 100 1010 100 HOH HOH A .
K 7 HOH 101 1011 101 HOH HOH A .
K 7 HOH 102 1012 102 HOH HOH A .
K 7 HOH 103 1013 103 HOH HOH A .
K 7 HOH 104 1014 104 HOH HOH A .
K 7 HOH 105 1015 105 HOH HOH A .
K 7 HOH 106 1016 106 HOH HOH A .
K 7 HOH 107 1017 107 HOH HOH A .
K 7 HOH 108 1018 108 HOH HOH A .
K 7 HOH 109 1019 109 HOH HOH A .
K 7 HOH 110 1020 110 HOH HOH A .
K 7 HOH 111 1021 111 HOH HOH A .
K 7 HOH 112 1022 112 HOH HOH A .
K 7 HOH 113 1023 113 HOH HOH A .
K 7 HOH 114 1024 114 HOH HOH A .
K 7 HOH 115 1025 115 HOH HOH A .
K 7 HOH 116 1026 116 HOH HOH A .
K 7 HOH 117 1027 117 HOH HOH A .
K 7 HOH 118 1028 118 HOH HOH A .
K 7 HOH 119 1029 119 HOH HOH A .
K 7 HOH 120 1030 120 HOH HOH A .
K 7 HOH 121 1031 121 HOH HOH A .
K 7 HOH 122 1032 122 HOH HOH A .
K 7 HOH 123 1033 123 HOH HOH A .
K 7 HOH 124 1034 124 HOH HOH A .
K 7 HOH 125 1035 125 HOH HOH A .
K 7 HOH 126 1036 126 HOH HOH A .
K 7 HOH 127 1037 127 HOH HOH A .
K 7 HOH 128 1038 128 HOH HOH A .
K 7 HOH 129 1039 129 HOH HOH A .
K 7 HOH 130 1040 130 HOH HOH A .
K 7 HOH 131 1041 131 HOH HOH A .
K 7 HOH 132 1042 132 HOH HOH A .
K 7 HOH 133 1043 133 HOH HOH A .
K 7 HOH 134 1044 134 HOH HOH A .
K 7 HOH 135 1045 135 HOH HOH A .
K 7 HOH 136 1046 136 HOH HOH A .
K 7 HOH 137 1047 137 HOH HOH A .
K 7 HOH 138 1048 138 HOH HOH A .
K 7 HOH 139 1049 139 HOH HOH A .
K 7 HOH 140 1050 140 HOH HOH A .
K 7 HOH 141 1051 141 HOH HOH A .
K 7 HOH 142 1052 142 HOH HOH A .
K 7 HOH 143 1053 143 HOH HOH A .
K 7 HOH 144 1054 144 HOH HOH A .
K 7 HOH 145 1055 145 HOH HOH A .
K 7 HOH 146 1056 146 HOH HOH A .
K 7 HOH 147 1057 147 HOH HOH A .
K 7 HOH 148 1058 148 HOH HOH A .
K 7 HOH 149 1059 149 HOH HOH A .
K 7 HOH 150 1060 150 HOH HOH A .
K 7 HOH 151 1061 151 HOH HOH A .
K 7 HOH 152 1062 152 HOH HOH A .
K 7 HOH 153 1063 153 HOH HOH A .
K 7 HOH 154 1064 154 HOH HOH A .
K 7 HOH 155 1065 155 HOH HOH A .
K 7 HOH 156 1066 156 HOH HOH A .
K 7 HOH 157 1067 157 HOH HOH A .
K 7 HOH 158 1068 158 HOH HOH A .
K 7 HOH 159 1069 159 HOH HOH A .
K 7 HOH 160 1070 160 HOH HOH A .
K 7 HOH 161 1071 161 HOH HOH A .
K 7 HOH 162 1072 162 HOH HOH A .
K 7 HOH 163 1073 163 HOH HOH A .
K 7 HOH 164 1074 164 HOH HOH A .
K 7 HOH 165 1075 165 HOH HOH A .
K 7 HOH 166 1076 166 HOH HOH A .
K 7 HOH 167 1077 167 HOH HOH A .
K 7 HOH 168 1078 169 HOH HOH A .
K 7 HOH 169 1079 170 HOH HOH A .
K 7 HOH 170 1080 171 HOH HOH A .
K 7 HOH 171 1081 172 HOH HOH A .
K 7 HOH 172 1082 173 HOH HOH A .
K 7 HOH 173 1083 174 HOH HOH A .
K 7 HOH 174 1084 175 HOH HOH A .
K 7 HOH 175 1085 177 HOH HOH A .
K 7 HOH 176 1086 178 HOH HOH A .
K 7 HOH 177 1087 179 HOH HOH A .
K 7 HOH 178 1088 181 HOH HOH A .
K 7 HOH 179 1089 182 HOH HOH A .
K 7 HOH 180 1090 183 HOH HOH A .
K 7 HOH 181 1091 184 HOH HOH A .
K 7 HOH 182 1092 186 HOH HOH A .
K 7 HOH 183 1093 187 HOH HOH A .
K 7 HOH 184 1094 188 HOH HOH A .
K 7 HOH 185 1095 189 HOH HOH A .
K 7 HOH 186 1096 190 HOH HOH A .
K 7 HOH 187 1097 191 HOH HOH A .
K 7 HOH 188 1098 192 HOH HOH A .
K 7 HOH 189 1099 193 HOH HOH A .
K 7 HOH 190 1100 194 HOH HOH A .
K 7 HOH 191 1101 195 HOH HOH A .
K 7 HOH 192 1102 196 HOH HOH A .
K 7 HOH 193 1103 197 HOH HOH A .
K 7 HOH 194 1104 198 HOH HOH A .
K 7 HOH 195 1105 199 HOH HOH A .
K 7 HOH 196 1106 200 HOH HOH A .
K 7 HOH 197 1107 201 HOH HOH A .
K 7 HOH 198 1108 202 HOH HOH A .
K 7 HOH 199 1109 203 HOH HOH A .
K 7 HOH 200 1110 204 HOH HOH A .
K 7 HOH 201 1111 205 HOH HOH A .
K 7 HOH 202 1112 206 HOH HOH A .
K 7 HOH 203 1113 207 HOH HOH A .
K 7 HOH 204 1114 208 HOH HOH A .
K 7 HOH 205 1115 209 HOH HOH A .
K 7 HOH 206 1116 210 HOH HOH A .
K 7 HOH 207 1117 211 HOH HOH A .
K 7 HOH 208 1118 212 HOH HOH A .
K 7 HOH 209 1119 213 HOH HOH A .
K 7 HOH 210 1120 214 HOH HOH A .
K 7 HOH 211 1121 215 HOH HOH A .
K 7 HOH 212 1122 216 HOH HOH A .
K 7 HOH 213 1123 217 HOH HOH A .
K 7 HOH 214 1124 218 HOH HOH A .
K 7 HOH 215 1125 219 HOH HOH A .
K 7 HOH 216 1126 220 HOH HOH A .
K 7 HOH 217 1127 221 HOH HOH A .
K 7 HOH 218 1128 222 HOH HOH A .
K 7 HOH 219 1129 223 HOH HOH A .
K 7 HOH 220 1130 224 HOH HOH A .
K 7 HOH 221 1131 225 HOH HOH A .
K 7 HOH 222 1132 226 HOH HOH A .
K 7 HOH 223 1133 227 HOH HOH A .
K 7 HOH 224 1134 228 HOH HOH A .
K 7 HOH 225 1135 229 HOH HOH A .
K 7 HOH 226 1136 230 HOH HOH A .
K 7 HOH 227 1137 231 HOH HOH A .
K 7 HOH 228 1138 232 HOH HOH A .
K 7 HOH 229 1139 233 HOH HOH A .
K 7 HOH 230 1140 234 HOH HOH A .
K 7 HOH 231 1141 235 HOH HOH A .
K 7 HOH 232 1142 236 HOH HOH A .
K 7 HOH 233 1143 237 HOH HOH A .
K 7 HOH 234 1144 238 HOH HOH A .
K 7 HOH 235 1145 239 HOH HOH A .
K 7 HOH 236 1146 240 HOH HOH A .
K 7 HOH 237 1147 241 HOH HOH A .
K 7 HOH 238 1148 242 HOH HOH A .
K 7 HOH 239 1149 243 HOH HOH A .
K 7 HOH 240 1150 244 HOH HOH A .
K 7 HOH 241 1151 245 HOH HOH A .
K 7 HOH 242 1152 247 HOH HOH A .
K 7 HOH 243 1153 249 HOH HOH A .
K 7 HOH 244 1154 250 HOH HOH A .
K 7 HOH 245 1155 251 HOH HOH A .
#
loop_
_pdbx_unobs_or_zero_occ_atoms.id
_pdbx_unobs_or_zero_occ_atoms.PDB_model_num
_pdbx_unobs_or_zero_occ_atoms.polymer_flag
_pdbx_unobs_or_zero_occ_atoms.occupancy_flag
_pdbx_unobs_or_zero_occ_atoms.auth_asym_id
_pdbx_unobs_or_zero_occ_atoms.auth_comp_id
_pdbx_unobs_or_zero_occ_atoms.auth_seq_id
_pdbx_unobs_or_zero_occ_atoms.PDB_ins_code
_pdbx_unobs_or_zero_occ_atoms.auth_atom_id
_pdbx_unobs_or_zero_occ_atoms.label_alt_id
_pdbx_unobs_or_zero_occ_atoms.label_asym_id
_pdbx_unobs_or_zero_occ_atoms.label_comp_id
_pdbx_unobs_or_zero_occ_atoms.label_seq_id
_pdbx_unobs_or_zero_occ_atoms.label_atom_id
1 1 Y 1 A THR 1 ? OG1 ? A THR 1 OG1
2 1 Y 1 A THR 1 ? CG2 ? A THR 1 CG2
3 1 Y 1 A GLU 77 ? CD ? A GLU 77 CD
4 1 Y 1 A GLU 77 ? OE1 ? A GLU 77 OE1
5 1 Y 1 A GLU 77 ? OE2 ? A GLU 77 OE2
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
REFMAC refinement 5.2.0019 ? 1
DNA 'data collection' . ? 2
MOSFLM 'data reduction' . ? 3
SCALA 'data scaling' . ? 4
MOLREP phasing . ? 5
#
_cell.entry_id 3C9Z
_cell.length_a 126.124
_cell.length_b 126.124
_cell.length_c 76.039
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 16
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 3C9Z
_symmetry.space_group_name_H-M 'I 41 2 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 98
_symmetry.space_group_name_Hall ?
#
_exptl.entry_id 3C9Z
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.67
_exptl_crystal.density_percent_sol 53.87
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.temp 293
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 4.5
_exptl_crystal_grow.pdbx_details
'PROTEIN 16 MG/ML, AMMONIUM SULFATE 2.0 M, SODIUM ACETATE 100 mM, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K'
_exptl_crystal_grow.pdbx_pH_range .
#
_diffrn.id 1
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type 'ADSC QUANTUM 4'
_diffrn_detector.pdbx_collection_date 2002-11-08
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator 'Diamond (111), Ge(220)'
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 0.937
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'ESRF BEAMLINE ID14-1'
_diffrn_source.pdbx_synchrotron_site ESRF
_diffrn_source.pdbx_synchrotron_beamline ID14-1
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list 0.937
#
_reflns.entry_id 3C9Z
_reflns.observed_criterion_sigma_F 0
_reflns.observed_criterion_sigma_I 0
_reflns.d_resolution_high 1.35
_reflns.d_resolution_low 64.55
_reflns.number_all 66690
_reflns.number_obs 66690
_reflns.percent_possible_obs 99.6
_reflns.pdbx_Rmerge_I_obs 0.075
_reflns.pdbx_Rsym_value 0.075
_reflns.pdbx_netI_over_sigmaI 14.0
_reflns.B_iso_Wilson_estimate 16.2
_reflns.pdbx_redundancy 4.6
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_ordinal 1
_reflns.pdbx_diffrn_id 1
#
_reflns_shell.d_res_high 1.35
_reflns_shell.d_res_low 1.39
_reflns_shell.percent_possible_all 99.7
_reflns_shell.Rmerge_I_obs 0.395
_reflns_shell.pdbx_Rsym_value 0.395
_reflns_shell.meanI_over_sigI_obs 2.3
_reflns_shell.pdbx_redundancy 3.3
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all 4901
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
#
_refine.entry_id 3C9Z
_refine.ls_number_reflns_obs 63280
_refine.ls_number_reflns_all 63280
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 0
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 19.94
_refine.ls_d_res_high 1.35
_refine.ls_percent_reflns_obs 99.51
_refine.ls_R_factor_obs 0.16227
_refine.ls_R_factor_all 0.16227
_refine.ls_R_factor_R_work 0.1603
_refine.ls_R_factor_R_free 0.20049
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 5.1
_refine.ls_number_reflns_R_free 3366
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc 0.971
_refine.correlation_coeff_Fo_to_Fc_free 0.957
_refine.B_iso_mean 24.002
_refine.aniso_B[1][1] -0.01
_refine.aniso_B[2][2] -0.01
_refine.aniso_B[3][3] 0.03
_refine.aniso_B[1][2] 0.00
_refine.aniso_B[1][3] 0.00
_refine.aniso_B[2][3] 0.00
_refine.solvent_model_details 'BABINET MODEL WITH MASK'
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii 1.20
_refine.pdbx_solvent_ion_probe_radii 0.80
_refine.pdbx_solvent_shrinkage_radii 0.80
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS'
_refine.pdbx_starting_model 'Structure of SNA-II, hexagonal crystal form'
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R 0.054
_refine.pdbx_overall_ESU_R_Free 0.055
_refine.overall_SU_ML 0.032
_refine.overall_SU_B 1.685
_refine.ls_redundancy_reflns_obs ?
_refine.B_iso_min ?
_refine.B_iso_max ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 1979
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 142
_refine_hist.number_atoms_solvent 245
_refine_hist.number_atoms_total 2366
_refine_hist.d_res_high 1.35
_refine_hist.d_res_low 19.94
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
r_bond_refined_d 0.020 0.021 ? 2310 'X-RAY DIFFRACTION' ?
r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ?
r_angle_refined_deg 1.887 2.007 ? 3189 'X-RAY DIFFRACTION' ?
r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ?
r_dihedral_angle_1_deg 7.268 5.000 ? 290 'X-RAY DIFFRACTION' ?
r_dihedral_angle_2_deg 36.355 24.842 ? 95 'X-RAY DIFFRACTION' ?
r_dihedral_angle_3_deg 12.231 15.000 ? 355 'X-RAY DIFFRACTION' ?
r_dihedral_angle_4_deg 18.681 15.000 ? 15 'X-RAY DIFFRACTION' ?
r_chiral_restr 0.143 0.200 ? 375 'X-RAY DIFFRACTION' ?
r_gen_planes_refined 0.012 0.020 ? 1725 'X-RAY DIFFRACTION' ?
r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_nbd_refined 0.219 0.200 ? 1000 'X-RAY DIFFRACTION' ?
r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_nbtor_refined 0.318 0.200 ? 1637 'X-RAY DIFFRACTION' ?
r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_xyhbond_nbd_refined 0.147 0.200 ? 169 'X-RAY DIFFRACTION' ?
r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_vdw_refined 0.248 0.200 ? 63 'X-RAY DIFFRACTION' ?
r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_hbond_refined 0.203 0.200 ? 32 'X-RAY DIFFRACTION' ?
r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_mcbond_it 4.204 5.000 ? 1411 'X-RAY DIFFRACTION' ?
r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_mcangle_it 5.117 7.000 ? 2265 'X-RAY DIFFRACTION' ?
r_scbond_it 6.290 11.000 ? 1009 'X-RAY DIFFRACTION' ?
r_scangle_it 8.041 13.000 ? 924 'X-RAY DIFFRACTION' ?
r_rigid_bond_restr 4.083 3.000 ? 2420 'X-RAY DIFFRACTION' ?
r_sphericity_free 10.775 3.000 ? 245 'X-RAY DIFFRACTION' ?
r_sphericity_bonded 8.510 3.000 ? 2248 'X-RAY DIFFRACTION' ?
#
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.d_res_high 1.350
_refine_ls_shell.d_res_low 1.385
_refine_ls_shell.number_reflns_R_work 4637
_refine_ls_shell.R_factor_R_work 0.188
_refine_ls_shell.percent_reflns_obs 99.61
_refine_ls_shell.R_factor_R_free 0.252
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 244
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_database_PDB_matrix.entry_id 3C9Z
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 3C9Z
_struct.title 'Sambucus nigra agglutinin II (SNA-II), tetragonal crystal form'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 3C9Z
_struct_keywords.pdbx_keywords 'Sugar binding protein, Plant protein'
_struct_keywords.text
'BETA-TREFOIL, RICIN-B DOMAIN, GLYCOSYLATION, Glycoprotein, Lectin, SUGAR BINDING PROTEIN, Plant protein'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 2 ?
D N N 3 ?
E N N 4 ?
F N N 5 ?
G N N 5 ?
H N N 5 ?
I N N 5 ?
J N N 6 ?
K N N 7 ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code NIGB_SAMNI
_struct_ref.pdbx_db_accession P33183
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code
;TSFTRNIVGRDGLCVDVRNGYDTDGTPLQLWPCGTQRNQRWTFDSDDTIRSMGKCMTANGLNNGSNIVIFNCSTAAENAI
KWEVPIDGSIINPSSGLVMTAPRAASRTILLLEDNIYAASQGWTVTNNVKPIVASIVGYKEMCLQSNGENNGVWMEDCEA
TSLQQQWALYGDRTIRVNSTRGLCVTTNGYNSKDLIIILKCQGLPSQRWFFNSDGAIVNPKSRHVMDVRASNVSLREIII
FPATGNPNQQWVTQVLPS
;
_struct_ref.pdbx_align_begin 306
_struct_ref.pdbx_db_isoform ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 3C9Z
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 258
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession P33183
_struct_ref_seq.db_align_beg 306
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 563
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 258
#
_struct_ref_seq_dif.align_id 1
_struct_ref_seq_dif.pdbx_pdb_id_code 3C9Z
_struct_ref_seq_dif.mon_id LEU
_struct_ref_seq_dif.pdbx_pdb_strand_id A
_struct_ref_seq_dif.seq_num 224
_struct_ref_seq_dif.pdbx_pdb_ins_code ?
_struct_ref_seq_dif.pdbx_seq_db_name UNP
_struct_ref_seq_dif.pdbx_seq_db_accession_code P33183
_struct_ref_seq_dif.db_mon_id HIS
_struct_ref_seq_dif.pdbx_seq_db_seq_num 529
_struct_ref_seq_dif.details 'SEE REMARK 999'
_struct_ref_seq_dif.pdbx_auth_seq_num 224
_struct_ref_seq_dif.pdbx_ordinal 1
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_struct_biol.id 1
_struct_biol.details ?
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 1 GLY A 9 ? LEU A 13 ? GLY A 9 LEU A 13 5 ? 5
HELX_P HELX_P2 2 ASN A 19 ? TYR A 21 ? ASN A 19 TYR A 21 5 ? 3
HELX_P HELX_P3 3 GLN A 36 ? ARG A 40 ? GLN A 36 ARG A 40 5 ? 5
HELX_P HELX_P4 4 ALA A 76 ? ILE A 80 ? ALA A 76 ILE A 80 5 ? 5
HELX_P HELX_P5 5 ALA A 118 ? GLY A 122 ? ALA A 118 GLY A 122 5 ? 5
HELX_P HELX_P6 6 GLY A 138 ? MET A 142 ? GLY A 138 MET A 142 5 ? 5
HELX_P HELX_P7 7 SER A 162 ? GLN A 165 ? SER A 162 GLN A 165 5 ? 4
HELX_P HELX_P8 8 LEU A 204 ? ARG A 208 ? LEU A 204 ARG A 208 5 ? 5
HELX_P HELX_P9 9 ALA A 230 ? ARG A 236 ? ALA A 230 ARG A 236 5 ? 7
HELX_P HELX_P10 10 ASN A 246 ? GLN A 250 ? ASN A 246 GLN A 250 5 ? 5
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
disulf1 disulf ? ? A CYS 14 SG ? ? ? 1_555 A CYS 33 SG ? ? A CYS 14 A CYS 33 1_555 ? ? ? ? ? ? ? 2.029 ? ?
disulf2 disulf ? ? A CYS 55 SG ? ? ? 1_555 A CYS 72 SG ? ? A CYS 55 A CYS 72 1_555 ? ? ? ? ? ? ? 2.059 ? ?
disulf3 disulf ? ? A CYS 143 SG ? ? ? 1_555 A CYS 158 SG ? ? A CYS 143 A CYS 158 1_555 ? ? ? ? ? ? ? 2.127 ? ?
disulf4 disulf ? ? A CYS 184 SG ? ? ? 1_555 A CYS 201 SG ? ? A CYS 184 A CYS 201 1_555 ? ? ? ? ? ? ? 2.079 ? ?
covale1 covale one ? A ASN 63 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 63 B NAG 1 1_555 ? ? ? ? ? ? ? 1.432 ? N-Glycosylation
covale2 covale one ? A ASN 71 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 71 C NAG 1 1_555 ? ? ? ? ? ? ? 1.451 ? N-Glycosylation
covale3 covale one ? A ASN 178 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 178 D NAG 1 1_555 ? ? ? ? ? ? ? 1.445 ? N-Glycosylation
covale4 covale one ? A ASN 232 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 232 A NAG 266 1_555 ? ? ? ? ? ? ? 1.456 ? N-Glycosylation
covale5 covale both ? B NAG . O3 ? ? ? 1_555 B FUC . C1 ? ? B NAG 1 B FUC 2 1_555 ? ? ? ? ? ? ? 1.449 ? ?
covale6 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 3 1_555 ? ? ? ? ? ? ? 1.440 ? ?
covale7 covale both ? C NAG . O3 ? ? ? 1_555 C FUC . C1 ? ? C NAG 1 C FUC 2 1_555 ? ? ? ? ? ? ? 1.449 ? ?
covale8 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 3 1_555 ? ? ? ? ? ? ? 1.445 ? ?
covale9 covale both ? D NAG . O4 ? ? ? 1_555 D NAG . C1 ? ? D NAG 1 D NAG 2 1_555 ? ? ? ? ? ? ? 1.444 ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
disulf ? ?
covale ? ?
#
loop_
_pdbx_modification_feature.ordinal
_pdbx_modification_feature.label_comp_id
_pdbx_modification_feature.label_asym_id
_pdbx_modification_feature.label_seq_id
_pdbx_modification_feature.label_alt_id
_pdbx_modification_feature.modified_residue_label_comp_id
_pdbx_modification_feature.modified_residue_label_asym_id
_pdbx_modification_feature.modified_residue_label_seq_id
_pdbx_modification_feature.modified_residue_label_alt_id
_pdbx_modification_feature.auth_comp_id
_pdbx_modification_feature.auth_asym_id
_pdbx_modification_feature.auth_seq_id
_pdbx_modification_feature.PDB_ins_code
_pdbx_modification_feature.symmetry
_pdbx_modification_feature.modified_residue_auth_comp_id
_pdbx_modification_feature.modified_residue_auth_asym_id
_pdbx_modification_feature.modified_residue_auth_seq_id
_pdbx_modification_feature.modified_residue_PDB_ins_code
_pdbx_modification_feature.modified_residue_symmetry
_pdbx_modification_feature.comp_id_linking_atom
_pdbx_modification_feature.modified_residue_id_linking_atom
_pdbx_modification_feature.modified_residue_id
_pdbx_modification_feature.ref_pcm_id
_pdbx_modification_feature.ref_comp_id
_pdbx_modification_feature.type
_pdbx_modification_feature.category
1 NAG B . ? ASN A 63 ? NAG B 1 ? 1_555 ASN A 63 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate
2 NAG C . ? ASN A 71 ? NAG C 1 ? 1_555 ASN A 71 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate
3 NAG D . ? ASN A 178 ? NAG D 1 ? 1_555 ASN A 178 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate
4 NAG E . ? ASN A 232 ? NAG A 266 ? 1_555 ASN A 232 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate
5 CYS A 14 ? CYS A 33 ? CYS A 14 ? 1_555 CYS A 33 ? 1_555 SG SG . . . None 'Disulfide bridge'
6 CYS A 55 ? CYS A 72 ? CYS A 55 ? 1_555 CYS A 72 ? 1_555 SG SG . . . None 'Disulfide bridge'
7 CYS A 143 ? CYS A 158 ? CYS A 143 ? 1_555 CYS A 158 ? 1_555 SG SG . . . None 'Disulfide bridge'
8 CYS A 184 ? CYS A 201 ? CYS A 184 ? 1_555 CYS A 201 ? 1_555 SG SG . . . None 'Disulfide bridge'
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
A ? 6 ?
B ? 2 ?
C ? 2 ?
D ? 6 ?
E ? 2 ?
F ? 2 ?
G ? 2 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
A 1 2 ? anti-parallel
A 2 3 ? anti-parallel
A 3 4 ? anti-parallel
A 4 5 ? anti-parallel
A 5 6 ? anti-parallel
B 1 2 ? anti-parallel
C 1 2 ? anti-parallel
D 1 2 ? anti-parallel
D 2 3 ? anti-parallel
D 3 4 ? anti-parallel
D 4 5 ? anti-parallel
D 5 6 ? anti-parallel
E 1 2 ? anti-parallel
F 1 2 ? anti-parallel
G 1 2 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
A 1 ASN A 66 ? PHE A 70 ? ASN A 66 PHE A 70
A 2 LYS A 54 ? ASN A 59 ? LYS A 54 ASN A 59
A 3 ILE A 49 ? SER A 51 ? ILE A 49 SER A 51
A 4 TRP A 41 ? PHE A 43 ? TRP A 41 PHE A 43
A 5 PHE A 3 ? VAL A 8 ? PHE A 3 VAL A 8
A 6 THR A 124 ? THR A 126 ? THR A 124 THR A 126
B 1 CYS A 14 ? VAL A 17 ? CYS A 14 VAL A 17
B 2 LEU A 28 ? TRP A 31 ? LEU A 28 TRP A 31
C 1 VAL A 98 ? THR A 100 ? VAL A 98 THR A 100
C 2 LEU A 111 ? GLU A 113 ? LEU A 111 GLU A 113
D 1 ILE A 196 ? LYS A 200 ? ILE A 196 LYS A 200
D 2 THR A 180 ? THR A 187 ? THR A 180 THR A 187
D 3 ILE A 175 ? VAL A 177 ? ILE A 175 VAL A 177
D 4 TRP A 167 ? LEU A 169 ? TRP A 167 LEU A 169
D 5 ILE A 132 ? VAL A 137 ? ILE A 132 VAL A 137
D 6 VAL A 252 ? VAL A 255 ? VAL A 252 VAL A 255
E 1 CYS A 143 ? GLN A 145 ? CYS A 143 GLN A 145
E 2 TRP A 154 ? GLU A 156 ? TRP A 154 GLU A 156
F 1 PHE A 210 ? PHE A 211 ? PHE A 210 PHE A 211
F 2 ILE A 217 ? VAL A 218 ? ILE A 217 VAL A 218
G 1 VAL A 225 ? VAL A 228 ? VAL A 225 VAL A 228
G 2 ILE A 238 ? PHE A 241 ? ILE A 238 PHE A 241
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
A 1 2 O VAL A 68 ? O VAL A 68 N THR A 57 ? N THR A 57
A 2 3 O MET A 56 ? O MET A 56 N ILE A 49 ? N ILE A 49
A 3 4 O ARG A 50 ? O ARG A 50 N THR A 42 ? N THR A 42
A 4 5 O TRP A 41 ? O TRP A 41 N ARG A 5 ? N ARG A 5
A 5 6 N VAL A 8 ? N VAL A 8 O THR A 124 ? O THR A 124
B 1 2 N CYS A 14 ? N CYS A 14 O TRP A 31 ? O TRP A 31
C 1 2 N THR A 100 ? N THR A 100 O LEU A 111 ? O LEU A 111
D 1 2 O LEU A 199 ? O LEU A 199 N CYS A 184 ? N CYS A 184
D 2 3 O VAL A 185 ? O VAL A 185 N ILE A 175 ? N ILE A 175
D 3 4 O ARG A 176 ? O ARG A 176 N ALA A 168 ? N ALA A 168
D 4 5 O LEU A 169 ? O LEU A 169 N ILE A 132 ? N ILE A 132
D 5 6 N VAL A 137 ? N VAL A 137 O VAL A 252 ? O VAL A 252
E 1 2 N CYS A 143 ? N CYS A 143 O GLU A 156 ? O GLU A 156
F 1 2 N PHE A 210 ? N PHE A 210 O VAL A 218 ? O VAL A 218
G 1 2 N VAL A 225 ? N VAL A 225 O PHE A 241 ? O PHE A 241
#
_pdbx_entry_details.entry_id 3C9Z
_pdbx_entry_details.sequence_details
;AUTHORS STATE THAT THE ELECTRON DENSITY OF THE STRUCTURE INDICATES CLEARLY THAT THE AMINO ACID AT POSITION 224 IS A LEU AND NOT A HIS.
;
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.has_ligand_of_interest ?
_pdbx_entry_details.has_protein_modification Y
#
_pdbx_validate_rmsd_bond.id 1
_pdbx_validate_rmsd_bond.PDB_model_num 1
_pdbx_validate_rmsd_bond.auth_atom_id_1 CA
_pdbx_validate_rmsd_bond.auth_asym_id_1 A
_pdbx_validate_rmsd_bond.auth_comp_id_1 CYS
_pdbx_validate_rmsd_bond.auth_seq_id_1 184
_pdbx_validate_rmsd_bond.PDB_ins_code_1 ?
_pdbx_validate_rmsd_bond.label_alt_id_1 ?
_pdbx_validate_rmsd_bond.auth_atom_id_2 CB
_pdbx_validate_rmsd_bond.auth_asym_id_2 A
_pdbx_validate_rmsd_bond.auth_comp_id_2 CYS
_pdbx_validate_rmsd_bond.auth_seq_id_2 184
_pdbx_validate_rmsd_bond.PDB_ins_code_2 ?
_pdbx_validate_rmsd_bond.label_alt_id_2 ?
_pdbx_validate_rmsd_bond.bond_value 1.779
_pdbx_validate_rmsd_bond.bond_target_value 1.535
_pdbx_validate_rmsd_bond.bond_deviation 0.244
_pdbx_validate_rmsd_bond.bond_standard_deviation 0.022
_pdbx_validate_rmsd_bond.linker_flag N
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 NE A ARG 107 ? ? CZ A ARG 107 ? ? NH1 A ARG 107 ? ? 116.82 120.30 -3.48 0.50 N
2 1 CA A CYS 184 ? ? CB A CYS 184 ? ? SG A CYS 184 ? ? 102.19 114.00 -11.81 1.80 N
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 SER A 106 ? C -42.95 150.43
2 1 ARG A 107 ? ? 80.64 0.88
3 1 ASN A 188 ? ? -91.16 51.70
4 1 LYS A 193 ? ? 78.66 -1.32
5 1 LYS A 193 ? ? 81.03 -1.32
6 1 ARG A 223 ? ? 83.17 -7.30
#
loop_
_pdbx_struct_mod_residue.id
_pdbx_struct_mod_residue.label_asym_id
_pdbx_struct_mod_residue.label_comp_id
_pdbx_struct_mod_residue.label_seq_id
_pdbx_struct_mod_residue.auth_asym_id
_pdbx_struct_mod_residue.auth_comp_id
_pdbx_struct_mod_residue.auth_seq_id
_pdbx_struct_mod_residue.PDB_ins_code
_pdbx_struct_mod_residue.parent_comp_id
_pdbx_struct_mod_residue.details
1 A ASN 63 A ASN 63 ? ASN 'GLYCOSYLATION SITE'
2 A ASN 71 A ASN 71 ? ASN 'GLYCOSYLATION SITE'
3 A ASN 178 A ASN 178 ? ASN 'GLYCOSYLATION SITE'
4 A ASN 232 A ASN 232 ? ASN 'GLYCOSYLATION SITE'
#
loop_
_pdbx_struct_special_symmetry.id
_pdbx_struct_special_symmetry.PDB_model_num
_pdbx_struct_special_symmetry.auth_asym_id
_pdbx_struct_special_symmetry.auth_comp_id
_pdbx_struct_special_symmetry.auth_seq_id
_pdbx_struct_special_symmetry.PDB_ins_code
_pdbx_struct_special_symmetry.label_asym_id
_pdbx_struct_special_symmetry.label_comp_id
_pdbx_struct_special_symmetry.label_seq_id
1 1 A SO4 903 ? H SO4 .
2 1 A HOH 945 ? K HOH .
3 1 A HOH 1031 ? K HOH .
4 1 A HOH 1130 ? K HOH .
#
_pdbx_unobs_or_zero_occ_residues.id 1
_pdbx_unobs_or_zero_occ_residues.PDB_model_num 1
_pdbx_unobs_or_zero_occ_residues.polymer_flag Y
_pdbx_unobs_or_zero_occ_residues.occupancy_flag 1
_pdbx_unobs_or_zero_occ_residues.auth_asym_id A
_pdbx_unobs_or_zero_occ_residues.auth_comp_id SER
_pdbx_unobs_or_zero_occ_residues.auth_seq_id 258
_pdbx_unobs_or_zero_occ_residues.PDB_ins_code ?
_pdbx_unobs_or_zero_occ_residues.label_asym_id A
_pdbx_unobs_or_zero_occ_residues.label_comp_id SER
_pdbx_unobs_or_zero_occ_residues.label_seq_id 258
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ACT C C N N 1
ACT O O N N 2
ACT OXT O N N 3
ACT CH3 C N N 4
ACT H1 H N N 5
ACT H2 H N N 6
ACT H3 H N N 7
ALA N N N N 8
ALA CA C N S 9
ALA C C N N 10
ALA O O N N 11
ALA CB C N N 12
ALA OXT O N N 13
ALA H H N N 14
ALA H2 H N N 15
ALA HA H N N 16
ALA HB1 H N N 17
ALA HB2 H N N 18
ALA HB3 H N N 19
ALA HXT H N N 20
ARG N N N N 21
ARG CA C N S 22
ARG C C N N 23
ARG O O N N 24
ARG CB C N N 25
ARG CG C N N 26
ARG CD C N N 27
ARG NE N N N 28
ARG CZ C N N 29
ARG NH1 N N N 30
ARG NH2 N N N 31
ARG OXT O N N 32
ARG H H N N 33
ARG H2 H N N 34
ARG HA H N N 35
ARG HB2 H N N 36
ARG HB3 H N N 37
ARG HG2 H N N 38
ARG HG3 H N N 39
ARG HD2 H N N 40
ARG HD3 H N N 41
ARG HE H N N 42
ARG HH11 H N N 43
ARG HH12 H N N 44
ARG HH21 H N N 45
ARG HH22 H N N 46
ARG HXT H N N 47
ASN N N N N 48
ASN CA C N S 49
ASN C C N N 50
ASN O O N N 51
ASN CB C N N 52
ASN CG C N N 53
ASN OD1 O N N 54
ASN ND2 N N N 55
ASN OXT O N N 56
ASN H H N N 57
ASN H2 H N N 58
ASN HA H N N 59
ASN HB2 H N N 60
ASN HB3 H N N 61
ASN HD21 H N N 62
ASN HD22 H N N 63
ASN HXT H N N 64
ASP N N N N 65
ASP CA C N S 66
ASP C C N N 67
ASP O O N N 68
ASP CB C N N 69
ASP CG C N N 70
ASP OD1 O N N 71
ASP OD2 O N N 72
ASP OXT O N N 73
ASP H H N N 74
ASP H2 H N N 75
ASP HA H N N 76
ASP HB2 H N N 77
ASP HB3 H N N 78
ASP HD2 H N N 79
ASP HXT H N N 80
CYS N N N N 81
CYS CA C N R 82
CYS C C N N 83
CYS O O N N 84
CYS CB C N N 85
CYS SG S N N 86
CYS OXT O N N 87
CYS H H N N 88
CYS H2 H N N 89
CYS HA H N N 90
CYS HB2 H N N 91
CYS HB3 H N N 92
CYS HG H N N 93
CYS HXT H N N 94
FUC C1 C N R 95
FUC C2 C N S 96
FUC C3 C N R 97
FUC C4 C N S 98
FUC C5 C N S 99
FUC C6 C N N 100
FUC O1 O N N 101
FUC O2 O N N 102
FUC O3 O N N 103
FUC O4 O N N 104
FUC O5 O N N 105
FUC H1 H N N 106
FUC H2 H N N 107
FUC H3 H N N 108
FUC H4 H N N 109
FUC H5 H N N 110
FUC H61 H N N 111
FUC H62 H N N 112
FUC H63 H N N 113
FUC HO1 H N N 114
FUC HO2 H N N 115
FUC HO3 H N N 116
FUC HO4 H N N 117
GLN N N N N 118
GLN CA C N S 119
GLN C C N N 120
GLN O O N N 121
GLN CB C N N 122
GLN CG C N N 123
GLN CD C N N 124
GLN OE1 O N N 125
GLN NE2 N N N 126
GLN OXT O N N 127
GLN H H N N 128
GLN H2 H N N 129
GLN HA H N N 130
GLN HB2 H N N 131
GLN HB3 H N N 132
GLN HG2 H N N 133
GLN HG3 H N N 134
GLN HE21 H N N 135
GLN HE22 H N N 136
GLN HXT H N N 137
GLU N N N N 138
GLU CA C N S 139
GLU C C N N 140
GLU O O N N 141
GLU CB C N N 142
GLU CG C N N 143
GLU CD C N N 144
GLU OE1 O N N 145
GLU OE2 O N N 146
GLU OXT O N N 147
GLU H H N N 148
GLU H2 H N N 149
GLU HA H N N 150
GLU HB2 H N N 151
GLU HB3 H N N 152
GLU HG2 H N N 153
GLU HG3 H N N 154
GLU HE2 H N N 155
GLU HXT H N N 156
GLY N N N N 157
GLY CA C N N 158
GLY C C N N 159
GLY O O N N 160
GLY OXT O N N 161
GLY H H N N 162
GLY H2 H N N 163
GLY HA2 H N N 164
GLY HA3 H N N 165
GLY HXT H N N 166
HIS N N N N 167
HIS CA C N S 168
HIS C C N N 169
HIS O O N N 170
HIS CB C N N 171
HIS CG C Y N 172
HIS ND1 N Y N 173
HIS CD2 C Y N 174
HIS CE1 C Y N 175
HIS NE2 N Y N 176
HIS OXT O N N 177
HIS H H N N 178
HIS H2 H N N 179
HIS HA H N N 180
HIS HB2 H N N 181
HIS HB3 H N N 182
HIS HD1 H N N 183
HIS HD2 H N N 184
HIS HE1 H N N 185
HIS HE2 H N N 186
HIS HXT H N N 187
HOH O O N N 188
HOH H1 H N N 189
HOH H2 H N N 190
ILE N N N N 191
ILE CA C N S 192
ILE C C N N 193
ILE O O N N 194
ILE CB C N S 195
ILE CG1 C N N 196
ILE CG2 C N N 197
ILE CD1 C N N 198
ILE OXT O N N 199
ILE H H N N 200
ILE H2 H N N 201
ILE HA H N N 202
ILE HB H N N 203
ILE HG12 H N N 204
ILE HG13 H N N 205
ILE HG21 H N N 206
ILE HG22 H N N 207
ILE HG23 H N N 208
ILE HD11 H N N 209
ILE HD12 H N N 210
ILE HD13 H N N 211
ILE HXT H N N 212
LEU N N N N 213
LEU CA C N S 214
LEU C C N N 215
LEU O O N N 216
LEU CB C N N 217
LEU CG C N N 218
LEU CD1 C N N 219
LEU CD2 C N N 220
LEU OXT O N N 221
LEU H H N N 222
LEU H2 H N N 223
LEU HA H N N 224
LEU HB2 H N N 225
LEU HB3 H N N 226
LEU HG H N N 227
LEU HD11 H N N 228
LEU HD12 H N N 229
LEU HD13 H N N 230
LEU HD21 H N N 231
LEU HD22 H N N 232
LEU HD23 H N N 233
LEU HXT H N N 234
LYS N N N N 235
LYS CA C N S 236
LYS C C N N 237
LYS O O N N 238
LYS CB C N N 239
LYS CG C N N 240
LYS CD C N N 241
LYS CE C N N 242
LYS NZ N N N 243
LYS OXT O N N 244
LYS H H N N 245
LYS H2 H N N 246
LYS HA H N N 247
LYS HB2 H N N 248
LYS HB3 H N N 249
LYS HG2 H N N 250
LYS HG3 H N N 251
LYS HD2 H N N 252
LYS HD3 H N N 253
LYS HE2 H N N 254
LYS HE3 H N N 255
LYS HZ1 H N N 256
LYS HZ2 H N N 257
LYS HZ3 H N N 258
LYS HXT H N N 259
MET N N N N 260
MET CA C N S 261
MET C C N N 262
MET O O N N 263
MET CB C N N 264
MET CG C N N 265
MET SD S N N 266
MET CE C N N 267
MET OXT O N N 268
MET H H N N 269
MET H2 H N N 270
MET HA H N N 271
MET HB2 H N N 272
MET HB3 H N N 273
MET HG2 H N N 274
MET HG3 H N N 275
MET HE1 H N N 276
MET HE2 H N N 277
MET HE3 H N N 278
MET HXT H N N 279
NAG C1 C N R 280
NAG C2 C N R 281
NAG C3 C N R 282
NAG C4 C N S 283
NAG C5 C N R 284
NAG C6 C N N 285
NAG C7 C N N 286
NAG C8 C N N 287
NAG N2 N N N 288
NAG O1 O N N 289
NAG O3 O N N 290
NAG O4 O N N 291
NAG O5 O N N 292
NAG O6 O N N 293
NAG O7 O N N 294
NAG H1 H N N 295
NAG H2 H N N 296
NAG H3 H N N 297
NAG H4 H N N 298
NAG H5 H N N 299
NAG H61 H N N 300
NAG H62 H N N 301
NAG H81 H N N 302
NAG H82 H N N 303
NAG H83 H N N 304
NAG HN2 H N N 305
NAG HO1 H N N 306
NAG HO3 H N N 307
NAG HO4 H N N 308
NAG HO6 H N N 309
PHE N N N N 310
PHE CA C N S 311
PHE C C N N 312
PHE O O N N 313
PHE CB C N N 314
PHE CG C Y N 315
PHE CD1 C Y N 316
PHE CD2 C Y N 317
PHE CE1 C Y N 318
PHE CE2 C Y N 319
PHE CZ C Y N 320
PHE OXT O N N 321
PHE H H N N 322
PHE H2 H N N 323
PHE HA H N N 324
PHE HB2 H N N 325
PHE HB3 H N N 326
PHE HD1 H N N 327
PHE HD2 H N N 328
PHE HE1 H N N 329
PHE HE2 H N N 330
PHE HZ H N N 331
PHE HXT H N N 332
PRO N N N N 333
PRO CA C N S 334
PRO C C N N 335
PRO O O N N 336
PRO CB C N N 337
PRO CG C N N 338
PRO CD C N N 339
PRO OXT O N N 340
PRO H H N N 341
PRO HA H N N 342
PRO HB2 H N N 343
PRO HB3 H N N 344
PRO HG2 H N N 345
PRO HG3 H N N 346
PRO HD2 H N N 347
PRO HD3 H N N 348
PRO HXT H N N 349
SER N N N N 350
SER CA C N S 351
SER C C N N 352
SER O O N N 353
SER CB C N N 354
SER OG O N N 355
SER OXT O N N 356
SER H H N N 357
SER H2 H N N 358
SER HA H N N 359
SER HB2 H N N 360
SER HB3 H N N 361
SER HG H N N 362
SER HXT H N N 363
SO4 S S N N 364
SO4 O1 O N N 365
SO4 O2 O N N 366
SO4 O3 O N N 367
SO4 O4 O N N 368
THR N N N N 369
THR CA C N S 370
THR C C N N 371
THR O O N N 372
THR CB C N R 373
THR OG1 O N N 374
THR CG2 C N N 375
THR OXT O N N 376
THR H H N N 377
THR H2 H N N 378
THR HA H N N 379
THR HB H N N 380
THR HG1 H N N 381
THR HG21 H N N 382
THR HG22 H N N 383
THR HG23 H N N 384
THR HXT H N N 385
TRP N N N N 386
TRP CA C N S 387
TRP C C N N 388
TRP O O N N 389
TRP CB C N N 390
TRP CG C Y N 391
TRP CD1 C Y N 392
TRP CD2 C Y N 393
TRP NE1 N Y N 394
TRP CE2 C Y N 395
TRP CE3 C Y N 396
TRP CZ2 C Y N 397
TRP CZ3 C Y N 398
TRP CH2 C Y N 399
TRP OXT O N N 400
TRP H H N N 401
TRP H2 H N N 402
TRP HA H N N 403
TRP HB2 H N N 404
TRP HB3 H N N 405
TRP HD1 H N N 406
TRP HE1 H N N 407
TRP HE3 H N N 408
TRP HZ2 H N N 409
TRP HZ3 H N N 410
TRP HH2 H N N 411
TRP HXT H N N 412
TYR N N N N 413
TYR CA C N S 414
TYR C C N N 415
TYR O O N N 416
TYR CB C N N 417
TYR CG C Y N 418
TYR CD1 C Y N 419
TYR CD2 C Y N 420
TYR CE1 C Y N 421
TYR CE2 C Y N 422
TYR CZ C Y N 423
TYR OH O N N 424
TYR OXT O N N 425
TYR H H N N 426
TYR H2 H N N 427
TYR HA H N N 428
TYR HB2 H N N 429
TYR HB3 H N N 430
TYR HD1 H N N 431
TYR HD2 H N N 432
TYR HE1 H N N 433
TYR HE2 H N N 434
TYR HH H N N 435
TYR HXT H N N 436
VAL N N N N 437
VAL CA C N S 438
VAL C C N N 439
VAL O O N N 440
VAL CB C N N 441
VAL CG1 C N N 442
VAL CG2 C N N 443
VAL OXT O N N 444
VAL H H N N 445
VAL H2 H N N 446
VAL HA H N N 447
VAL HB H N N 448
VAL HG11 H N N 449
VAL HG12 H N N 450
VAL HG13 H N N 451
VAL HG21 H N N 452
VAL HG22 H N N 453
VAL HG23 H N N 454
VAL HXT H N N 455
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ACT C O doub N N 1
ACT C OXT sing N N 2
ACT C CH3 sing N N 3
ACT CH3 H1 sing N N 4
ACT CH3 H2 sing N N 5
ACT CH3 H3 sing N N 6
ALA N CA sing N N 7
ALA N H sing N N 8
ALA N H2 sing N N 9
ALA CA C sing N N 10
ALA CA CB sing N N 11
ALA CA HA sing N N 12
ALA C O doub N N 13
ALA C OXT sing N N 14
ALA CB HB1 sing N N 15
ALA CB HB2 sing N N 16
ALA CB HB3 sing N N 17
ALA OXT HXT sing N N 18
ARG N CA sing N N 19
ARG N H sing N N 20
ARG N H2 sing N N 21
ARG CA C sing N N 22
ARG CA CB sing N N 23
ARG CA HA sing N N 24
ARG C O doub N N 25
ARG C OXT sing N N 26
ARG CB CG sing N N 27
ARG CB HB2 sing N N 28
ARG CB HB3 sing N N 29
ARG CG CD sing N N 30
ARG CG HG2 sing N N 31
ARG CG HG3 sing N N 32
ARG CD NE sing N N 33
ARG CD HD2 sing N N 34
ARG CD HD3 sing N N 35
ARG NE CZ sing N N 36
ARG NE HE sing N N 37
ARG CZ NH1 sing N N 38
ARG CZ NH2 doub N N 39
ARG NH1 HH11 sing N N 40
ARG NH1 HH12 sing N N 41
ARG NH2 HH21 sing N N 42
ARG NH2 HH22 sing N N 43
ARG OXT HXT sing N N 44
ASN N CA sing N N 45
ASN N H sing N N 46
ASN N H2 sing N N 47
ASN CA C sing N N 48
ASN CA CB sing N N 49
ASN CA HA sing N N 50
ASN C O doub N N 51
ASN C OXT sing N N 52
ASN CB CG sing N N 53
ASN CB HB2 sing N N 54
ASN CB HB3 sing N N 55
ASN CG OD1 doub N N 56
ASN CG ND2 sing N N 57
ASN ND2 HD21 sing N N 58
ASN ND2 HD22 sing N N 59
ASN OXT HXT sing N N 60
ASP N CA sing N N 61
ASP N H sing N N 62
ASP N H2 sing N N 63
ASP CA C sing N N 64
ASP CA CB sing N N 65
ASP CA HA sing N N 66
ASP C O doub N N 67
ASP C OXT sing N N 68
ASP CB CG sing N N 69
ASP CB HB2 sing N N 70
ASP CB HB3 sing N N 71
ASP CG OD1 doub N N 72
ASP CG OD2 sing N N 73
ASP OD2 HD2 sing N N 74
ASP OXT HXT sing N N 75
CYS N CA sing N N 76
CYS N H sing N N 77
CYS N H2 sing N N 78
CYS CA C sing N N 79
CYS CA CB sing N N 80
CYS CA HA sing N N 81
CYS C O doub N N 82
CYS C OXT sing N N 83
CYS CB SG sing N N 84
CYS CB HB2 sing N N 85
CYS CB HB3 sing N N 86
CYS SG HG sing N N 87
CYS OXT HXT sing N N 88
FUC C1 C2 sing N N 89
FUC C1 O1 sing N N 90
FUC C1 O5 sing N N 91
FUC C1 H1 sing N N 92
FUC C2 C3 sing N N 93
FUC C2 O2 sing N N 94
FUC C2 H2 sing N N 95
FUC C3 C4 sing N N 96
FUC C3 O3 sing N N 97
FUC C3 H3 sing N N 98
FUC C4 C5 sing N N 99
FUC C4 O4 sing N N 100
FUC C4 H4 sing N N 101
FUC C5 C6 sing N N 102
FUC C5 O5 sing N N 103
FUC C5 H5 sing N N 104
FUC C6 H61 sing N N 105
FUC C6 H62 sing N N 106
FUC C6 H63 sing N N 107
FUC O1 HO1 sing N N 108
FUC O2 HO2 sing N N 109
FUC O3 HO3 sing N N 110
FUC O4 HO4 sing N N 111
GLN N CA sing N N 112
GLN N H sing N N 113
GLN N H2 sing N N 114
GLN CA C sing N N 115
GLN CA CB sing N N 116
GLN CA HA sing N N 117
GLN C O doub N N 118
GLN C OXT sing N N 119
GLN CB CG sing N N 120
GLN CB HB2 sing N N 121
GLN CB HB3 sing N N 122
GLN CG CD sing N N 123
GLN CG HG2 sing N N 124
GLN CG HG3 sing N N 125
GLN CD OE1 doub N N 126
GLN CD NE2 sing N N 127
GLN NE2 HE21 sing N N 128
GLN NE2 HE22 sing N N 129
GLN OXT HXT sing N N 130
GLU N CA sing N N 131
GLU N H sing N N 132
GLU N H2 sing N N 133
GLU CA C sing N N 134
GLU CA CB sing N N 135
GLU CA HA sing N N 136
GLU C O doub N N 137
GLU C OXT sing N N 138
GLU CB CG sing N N 139
GLU CB HB2 sing N N 140
GLU CB HB3 sing N N 141
GLU CG CD sing N N 142
GLU CG HG2 sing N N 143
GLU CG HG3 sing N N 144
GLU CD OE1 doub N N 145
GLU CD OE2 sing N N 146
GLU OE2 HE2 sing N N 147
GLU OXT HXT sing N N 148
GLY N CA sing N N 149
GLY N H sing N N 150
GLY N H2 sing N N 151
GLY CA C sing N N 152
GLY CA HA2 sing N N 153
GLY CA HA3 sing N N 154
GLY C O doub N N 155
GLY C OXT sing N N 156
GLY OXT HXT sing N N 157
HIS N CA sing N N 158
HIS N H sing N N 159
HIS N H2 sing N N 160
HIS CA C sing N N 161
HIS CA CB sing N N 162
HIS CA HA sing N N 163
HIS C O doub N N 164
HIS C OXT sing N N 165
HIS CB CG sing N N 166
HIS CB HB2 sing N N 167
HIS CB HB3 sing N N 168
HIS CG ND1 sing Y N 169
HIS CG CD2 doub Y N 170
HIS ND1 CE1 doub Y N 171
HIS ND1 HD1 sing N N 172
HIS CD2 NE2 sing Y N 173
HIS CD2 HD2 sing N N 174
HIS CE1 NE2 sing Y N 175
HIS CE1 HE1 sing N N 176
HIS NE2 HE2 sing N N 177
HIS OXT HXT sing N N 178
HOH O H1 sing N N 179
HOH O H2 sing N N 180
ILE N CA sing N N 181
ILE N H sing N N 182
ILE N H2 sing N N 183
ILE CA C sing N N 184
ILE CA CB sing N N 185
ILE CA HA sing N N 186
ILE C O doub N N 187
ILE C OXT sing N N 188
ILE CB CG1 sing N N 189
ILE CB CG2 sing N N 190
ILE CB HB sing N N 191
ILE CG1 CD1 sing N N 192
ILE CG1 HG12 sing N N 193
ILE CG1 HG13 sing N N 194
ILE CG2 HG21 sing N N 195
ILE CG2 HG22 sing N N 196
ILE CG2 HG23 sing N N 197
ILE CD1 HD11 sing N N 198
ILE CD1 HD12 sing N N 199
ILE CD1 HD13 sing N N 200
ILE OXT HXT sing N N 201
LEU N CA sing N N 202
LEU N H sing N N 203
LEU N H2 sing N N 204
LEU CA C sing N N 205
LEU CA CB sing N N 206
LEU CA HA sing N N 207
LEU C O doub N N 208
LEU C OXT sing N N 209
LEU CB CG sing N N 210
LEU CB HB2 sing N N 211
LEU CB HB3 sing N N 212
LEU CG CD1 sing N N 213
LEU CG CD2 sing N N 214
LEU CG HG sing N N 215
LEU CD1 HD11 sing N N 216
LEU CD1 HD12 sing N N 217
LEU CD1 HD13 sing N N 218
LEU CD2 HD21 sing N N 219
LEU CD2 HD22 sing N N 220
LEU CD2 HD23 sing N N 221
LEU OXT HXT sing N N 222
LYS N CA sing N N 223
LYS N H sing N N 224
LYS N H2 sing N N 225
LYS CA C sing N N 226
LYS CA CB sing N N 227
LYS CA HA sing N N 228
LYS C O doub N N 229
LYS C OXT sing N N 230
LYS CB CG sing N N 231
LYS CB HB2 sing N N 232
LYS CB HB3 sing N N 233
LYS CG CD sing N N 234
LYS CG HG2 sing N N 235
LYS CG HG3 sing N N 236
LYS CD CE sing N N 237
LYS CD HD2 sing N N 238
LYS CD HD3 sing N N 239
LYS CE NZ sing N N 240
LYS CE HE2 sing N N 241
LYS CE HE3 sing N N 242
LYS NZ HZ1 sing N N 243
LYS NZ HZ2 sing N N 244
LYS NZ HZ3 sing N N 245
LYS OXT HXT sing N N 246
MET N CA sing N N 247
MET N H sing N N 248
MET N H2 sing N N 249
MET CA C sing N N 250
MET CA CB sing N N 251
MET CA HA sing N N 252
MET C O doub N N 253
MET C OXT sing N N 254
MET CB CG sing N N 255
MET CB HB2 sing N N 256
MET CB HB3 sing N N 257
MET CG SD sing N N 258
MET CG HG2 sing N N 259
MET CG HG3 sing N N 260
MET SD CE sing N N 261
MET CE HE1 sing N N 262
MET CE HE2 sing N N 263
MET CE HE3 sing N N 264
MET OXT HXT sing N N 265
NAG C1 C2 sing N N 266
NAG C1 O1 sing N N 267
NAG C1 O5 sing N N 268
NAG C1 H1 sing N N 269
NAG C2 C3 sing N N 270
NAG C2 N2 sing N N 271
NAG C2 H2 sing N N 272
NAG C3 C4 sing N N 273
NAG C3 O3 sing N N 274
NAG C3 H3 sing N N 275
NAG C4 C5 sing N N 276
NAG C4 O4 sing N N 277
NAG C4 H4 sing N N 278
NAG C5 C6 sing N N 279
NAG C5 O5 sing N N 280
NAG C5 H5 sing N N 281
NAG C6 O6 sing N N 282
NAG C6 H61 sing N N 283
NAG C6 H62 sing N N 284
NAG C7 C8 sing N N 285
NAG C7 N2 sing N N 286
NAG C7 O7 doub N N 287
NAG C8 H81 sing N N 288
NAG C8 H82 sing N N 289
NAG C8 H83 sing N N 290
NAG N2 HN2 sing N N 291
NAG O1 HO1 sing N N 292
NAG O3 HO3 sing N N 293
NAG O4 HO4 sing N N 294
NAG O6 HO6 sing N N 295
PHE N CA sing N N 296
PHE N H sing N N 297
PHE N H2 sing N N 298
PHE CA C sing N N 299
PHE CA CB sing N N 300
PHE CA HA sing N N 301
PHE C O doub N N 302
PHE C OXT sing N N 303
PHE CB CG sing N N 304
PHE CB HB2 sing N N 305
PHE CB HB3 sing N N 306
PHE CG CD1 doub Y N 307
PHE CG CD2 sing Y N 308
PHE CD1 CE1 sing Y N 309
PHE CD1 HD1 sing N N 310
PHE CD2 CE2 doub Y N 311
PHE CD2 HD2 sing N N 312
PHE CE1 CZ doub Y N 313
PHE CE1 HE1 sing N N 314
PHE CE2 CZ sing Y N 315
PHE CE2 HE2 sing N N 316
PHE CZ HZ sing N N 317
PHE OXT HXT sing N N 318
PRO N CA sing N N 319
PRO N CD sing N N 320
PRO N H sing N N 321
PRO CA C sing N N 322
PRO CA CB sing N N 323
PRO CA HA sing N N 324
PRO C O doub N N 325
PRO C OXT sing N N 326
PRO CB CG sing N N 327
PRO CB HB2 sing N N 328
PRO CB HB3 sing N N 329
PRO CG CD sing N N 330
PRO CG HG2 sing N N 331
PRO CG HG3 sing N N 332
PRO CD HD2 sing N N 333
PRO CD HD3 sing N N 334
PRO OXT HXT sing N N 335
SER N CA sing N N 336
SER N H sing N N 337
SER N H2 sing N N 338
SER CA C sing N N 339
SER CA CB sing N N 340
SER CA HA sing N N 341
SER C O doub N N 342
SER C OXT sing N N 343
SER CB OG sing N N 344
SER CB HB2 sing N N 345
SER CB HB3 sing N N 346
SER OG HG sing N N 347
SER OXT HXT sing N N 348
SO4 S O1 doub N N 349
SO4 S O2 doub N N 350
SO4 S O3 sing N N 351
SO4 S O4 sing N N 352
THR N CA sing N N 353
THR N H sing N N 354
THR N H2 sing N N 355
THR CA C sing N N 356
THR CA CB sing N N 357
THR CA HA sing N N 358
THR C O doub N N 359
THR C OXT sing N N 360
THR CB OG1 sing N N 361
THR CB CG2 sing N N 362
THR CB HB sing N N 363
THR OG1 HG1 sing N N 364
THR CG2 HG21 sing N N 365
THR CG2 HG22 sing N N 366
THR CG2 HG23 sing N N 367
THR OXT HXT sing N N 368
TRP N CA sing N N 369
TRP N H sing N N 370
TRP N H2 sing N N 371
TRP CA C sing N N 372
TRP CA CB sing N N 373
TRP CA HA sing N N 374
TRP C O doub N N 375
TRP C OXT sing N N 376
TRP CB CG sing N N 377
TRP CB HB2 sing N N 378
TRP CB HB3 sing N N 379
TRP CG CD1 doub Y N 380
TRP CG CD2 sing Y N 381
TRP CD1 NE1 sing Y N 382
TRP CD1 HD1 sing N N 383
TRP CD2 CE2 doub Y N 384
TRP CD2 CE3 sing Y N 385
TRP NE1 CE2 sing Y N 386
TRP NE1 HE1 sing N N 387
TRP CE2 CZ2 sing Y N 388
TRP CE3 CZ3 doub Y N 389
TRP CE3 HE3 sing N N 390
TRP CZ2 CH2 doub Y N 391
TRP CZ2 HZ2 sing N N 392
TRP CZ3 CH2 sing Y N 393
TRP CZ3 HZ3 sing N N 394
TRP CH2 HH2 sing N N 395
TRP OXT HXT sing N N 396
TYR N CA sing N N 397
TYR N H sing N N 398
TYR N H2 sing N N 399
TYR CA C sing N N 400
TYR CA CB sing N N 401
TYR CA HA sing N N 402
TYR C O doub N N 403
TYR C OXT sing N N 404
TYR CB CG sing N N 405
TYR CB HB2 sing N N 406
TYR CB HB3 sing N N 407
TYR CG CD1 doub Y N 408
TYR CG CD2 sing Y N 409
TYR CD1 CE1 sing Y N 410
TYR CD1 HD1 sing N N 411
TYR CD2 CE2 doub Y N 412
TYR CD2 HD2 sing N N 413
TYR CE1 CZ doub Y N 414
TYR CE1 HE1 sing N N 415
TYR CE2 CZ sing Y N 416
TYR CE2 HE2 sing N N 417
TYR CZ OH sing N N 418
TYR OH HH sing N N 419
TYR OXT HXT sing N N 420
VAL N CA sing N N 421
VAL N H sing N N 422
VAL N H2 sing N N 423
VAL CA C sing N N 424
VAL CA CB sing N N 425
VAL CA HA sing N N 426
VAL C O doub N N 427
VAL C OXT sing N N 428
VAL CB CG1 sing N N 429
VAL CB CG2 sing N N 430
VAL CB HB sing N N 431
VAL CG1 HG11 sing N N 432
VAL CG1 HG12 sing N N 433
VAL CG1 HG13 sing N N 434
VAL CG2 HG21 sing N N 435
VAL CG2 HG22 sing N N 436
VAL CG2 HG23 sing N N 437
VAL OXT HXT sing N N 438
#
loop_
_pdbx_entity_branch_list.entity_id
_pdbx_entity_branch_list.comp_id
_pdbx_entity_branch_list.num
_pdbx_entity_branch_list.hetero
2 NAG 1 n
2 FUC 2 n
2 NAG 3 n
3 NAG 1 n
3 NAG 2 n
#
_pdbx_initial_refinement_model.accession_code ?
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name Other
_pdbx_initial_refinement_model.details 'Structure of SNA-II, hexagonal crystal form'
#
_atom_sites.entry_id 3C9Z
_atom_sites.fract_transf_matrix[1][1] 0.007929
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.007929
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.013151
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
S
#
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