HEADER PHEROMONE-BINDING PROTEIN 19-FEB-08 3CAB TITLE CRYSTAL STRUCTURE OF A PHEROMONE BINDING PROTEIN FROM APIS MELLIFERA TITLE 2 SOAKED AT PH 7.0 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHEROMONE-BINDING PROTEIN ASP1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 26-144; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: APIS MELLIFERA; SOURCE 3 ORGANISM_COMMON: HONEYBEE; SOURCE 4 EXPRESSION_SYSTEM: PICHIA PASTORIS; SOURCE 5 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 6 EXPRESSION_SYSTEM_PLASMID: PHIL-D2 KEYWDS HONEYBEE, APIS MELLIFERA, PHEROMONE BINDING PROTEIN, SIGNAL KEYWDS 2 TRANSDUCTION, QUEEN MANDIBULAR PHEROMONE, PHEROMONE-BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.E.PESENTI,S.SPINELLI,V.BEZIRARD,L.BRIAND,J.C.PERNOLLET,M.TEGONI, AUTHOR 2 C.CAMBILLAU REVDAT 5 01-NOV-23 3CAB 1 REMARK REVDAT 4 13-JUL-11 3CAB 1 VERSN REVDAT 3 24-FEB-09 3CAB 1 VERSN REVDAT 2 24-JUN-08 3CAB 1 JRNL REVDAT 1 10-JUN-08 3CAB 0 JRNL AUTH M.E.PESENTI,S.SPINELLI,V.BEZIRARD,L.BRIAND,J.C.PERNOLLET, JRNL AUTH 2 M.TEGONI,C.CAMBILLAU JRNL TITL STRUCTURAL BASIS OF THE HONEY BEE PBP PHEROMONE AND JRNL TITL 2 PH-INDUCED CONFORMATIONAL CHANGE JRNL REF J.MOL.BIOL. V. 380 158 2008 JRNL REFN ISSN 0022-2836 JRNL PMID 18508083 JRNL DOI 10.1016/J.JMB.2008.04.048 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 11121 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.100 REMARK 3 FREE R VALUE TEST SET COUNT : 976 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 802 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.88 REMARK 3 BIN R VALUE (WORKING SET) : 0.2150 REMARK 3 BIN FREE R VALUE SET COUNT : 61 REMARK 3 BIN FREE R VALUE : 0.2570 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 907 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 112 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 29.57 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.18000 REMARK 3 B22 (A**2) : -1.77000 REMARK 3 B33 (A**2) : 1.59000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.137 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.134 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.090 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.921 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 956 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 628 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1301 ; 1.362 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1549 ; 0.948 ; 3.008 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 120 ; 5.165 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 46 ;36.114 ;27.174 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 162 ;13.151 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 2 ; 7.026 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 146 ; 0.086 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1057 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 159 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 249 ; 0.213 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 608 ; 0.190 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 483 ; 0.177 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 448 ; 0.091 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 72 ; 0.197 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 10 ; 0.239 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 21 ; 0.225 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 17 ; 0.208 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 770 ; 0.812 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 235 ; 0.193 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 965 ; 1.011 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 411 ; 1.559 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 334 ; 2.164 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 69 REMARK 3 ORIGIN FOR THE GROUP (A): 11.3590 11.7451 -4.6732 REMARK 3 T TENSOR REMARK 3 T11: -0.2055 T22: -0.1824 REMARK 3 T33: -0.1005 T12: -0.0434 REMARK 3 T13: -0.0131 T23: 0.0135 REMARK 3 L TENSOR REMARK 3 L11: 1.7927 L22: 2.6682 REMARK 3 L33: 5.0657 L12: -0.5017 REMARK 3 L13: 1.1748 L23: -1.6184 REMARK 3 S TENSOR REMARK 3 S11: -0.0312 S12: 0.0965 S13: 0.4089 REMARK 3 S21: 0.0874 S22: -0.2843 S23: -0.2810 REMARK 3 S31: -0.3878 S32: 0.5244 S33: 0.3155 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 70 A 88 REMARK 3 ORIGIN FOR THE GROUP (A): 19.7768 18.1512 9.4095 REMARK 3 T TENSOR REMARK 3 T11: -0.0036 T22: 0.0747 REMARK 3 T33: -0.0953 T12: -0.1159 REMARK 3 T13: -0.0306 T23: -0.0995 REMARK 3 L TENSOR REMARK 3 L11: 13.9879 L22: 4.7053 REMARK 3 L33: 4.3957 L12: 2.5724 REMARK 3 L13: -3.7635 L23: 0.6861 REMARK 3 S TENSOR REMARK 3 S11: -0.2458 S12: 0.4414 S13: -0.2822 REMARK 3 S21: -0.1101 S22: 0.2810 S23: -0.4232 REMARK 3 S31: -0.0028 S32: 0.3033 S33: -0.0352 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 89 A 119 REMARK 3 ORIGIN FOR THE GROUP (A): 7.2770 15.0624 4.8703 REMARK 3 T TENSOR REMARK 3 T11: -0.1570 T22: -0.1335 REMARK 3 T33: -0.1181 T12: -0.0299 REMARK 3 T13: 0.0069 T23: -0.0207 REMARK 3 L TENSOR REMARK 3 L11: 4.2499 L22: 13.0035 REMARK 3 L33: 10.6670 L12: 1.4389 REMARK 3 L13: 3.6147 L23: 5.3424 REMARK 3 S TENSOR REMARK 3 S11: -0.3117 S12: -0.0303 S13: 0.4949 REMARK 3 S21: -0.3583 S22: 0.0817 S23: 0.0549 REMARK 3 S31: -0.9924 S32: 0.4167 S33: 0.2300 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3CAB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-FEB-08. REMARK 100 THE DEPOSITION ID IS D_1000046537. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-SEP-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : CYLINDRICAL GAZING INCIDENCE REMARK 200 MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12126 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 56.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : 0.06000 REMARK 200 FOR THE DATA SET : 21.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : 0.41300 REMARK 200 R SYM FOR SHELL (I) : 0.41300 REMARK 200 FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC 5.2.0019 REMARK 200 STARTING MODEL: PDB ENTRY 3BJH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7M AMMONIUM SULFATE, 0.1M SODIUM REMARK 280 CITRATE, PH5.5, CRYSTAL WAS SOAKED IN SAME CONDITIONS AT PH7.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 24.77850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 24.77850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 37.73900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.09250 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 37.73900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.09250 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 24.77850 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 37.73900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 43.09250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 24.77850 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 37.73900 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 43.09250 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 124 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 134 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 147 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 167 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 210 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 PRO A 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 112 92.57 -169.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3BJH RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN COMPLEX WITH THE N-BUTYL BENZENESULFONAMIDE AT REMARK 900 PH 5.5 REMARK 900 RELATED ID: 3BFA RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN COMPLEX WITH THE QUEEN MANDIBULAR PHEROMONE AT REMARK 900 PH 5.5 REMARK 900 RELATED ID: 3BFB RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN COMPLEX WITH THE 9-KETO-2(E)-DECENOIC ACID AT REMARK 900 PH 5.5 REMARK 900 RELATED ID: 3BFH RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN COMPLEX WITH HEXADECANOIC ACID AT PH 5.5 REMARK 900 RELATED ID: 2H8V RELATED DB: PDB REMARK 900 UNCOMPLEXED FORM OF THE SAME PROTEIN DBREF 3CAB A 1 119 UNP Q9U9J6 Q9U9J6_APIME 26 144 SEQRES 1 A 119 ALA PRO ASP TRP VAL PRO PRO GLU VAL PHE ASP LEU VAL SEQRES 2 A 119 ALA GLU ASP LYS ALA ARG CYS MET SER GLU HIS GLY THR SEQRES 3 A 119 THR GLN ALA GLN ILE ASP ASP VAL ASP LYS GLY ASN LEU SEQRES 4 A 119 VAL ASN GLU PRO SER ILE THR CYS TYR MET TYR CYS LEU SEQRES 5 A 119 LEU GLU ALA PHE SER LEU VAL ASP ASP GLU ALA ASN VAL SEQRES 6 A 119 ASP GLU ASP ILE MET LEU GLY LEU LEU PRO ASP GLN LEU SEQRES 7 A 119 GLN GLU ARG ALA GLN SER VAL MET GLY LYS CYS LEU PRO SEQRES 8 A 119 THR SER GLY SER ASP ASN CYS ASN LYS ILE TYR ASN LEU SEQRES 9 A 119 ALA LYS CYS VAL GLN GLU SER ALA PRO ASP VAL TRP PHE SEQRES 10 A 119 VAL ILE HET GOL A 120 6 HET GOL A 121 6 HET GOL A 122 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL 3(C3 H8 O3) FORMUL 5 HOH *112(H2 O) HELIX 1 1 PRO A 6 VAL A 13 1 8 HELIX 2 2 VAL A 13 GLY A 25 1 13 HELIX 3 3 THR A 27 LYS A 36 1 10 HELIX 4 4 GLU A 42 PHE A 56 1 15 HELIX 5 5 ASP A 66 LEU A 74 1 9 HELIX 6 6 PRO A 75 GLN A 77 5 3 HELIX 7 7 LEU A 78 LEU A 90 1 13 HELIX 8 8 ASP A 96 ALA A 112 1 17 HELIX 9 9 PRO A 113 TRP A 116 5 4 SSBOND 1 CYS A 20 CYS A 51 1555 1555 2.03 SSBOND 2 CYS A 47 CYS A 98 1555 1555 2.05 SSBOND 3 CYS A 89 CYS A 107 1555 1555 2.05 CISPEP 1 LEU A 90 PRO A 91 0 0.20 CRYST1 75.478 86.185 49.557 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013249 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011603 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020179 0.00000